View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11179_low_6 (Length: 427)

Name: NF11179_low_6
Description: NF11179
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11179_low_6
NF11179_low_6
[»] chr4 (8 HSPs)
chr4 (4-357)||(28607166-28607521)
chr4 (4-357)||(28611928-28612283)
chr4 (359-411)||(14177907-14177959)
chr4 (359-411)||(28607914-28607966)
chr4 (4-55)||(11104424-11104474)
chr4 (4-52)||(14178646-14178696)
chr4 (4-52)||(14173892-14173942)
chr4 (4-56)||(44161538-44161591)
[»] chr1 (2 HSPs)
chr1 (57-357)||(34906756-34907056)
chr1 (4-54)||(34907092-34907144)
[»] chr2 (1 HSPs)
chr2 (4-357)||(8538835-8539188)
[»] chr6 (1 HSPs)
chr6 (212-357)||(2308760-2308905)
[»] chr8 (7 HSPs)
chr8 (6-295)||(17123887-17124176)
chr8 (359-411)||(12934637-12934689)
chr8 (4-54)||(12930629-12930681)
chr8 (4-54)||(12935375-12935427)
chr8 (229-295)||(17121733-17121801)
chr8 (301-357)||(12930336-12930390)
chr8 (301-357)||(12935082-12935136)
[»] chr7 (4 HSPs)
chr7 (4-142)||(37040786-37040927)
chr7 (359-411)||(15300423-15300475)
chr7 (4-60)||(15302891-15302949)
chr7 (3-60)||(15290184-15290244)
[»] chr3 (1 HSPs)
chr3 (285-357)||(51298526-51298598)
[»] chr5 (2 HSPs)
chr5 (4-60)||(29107233-29107291)
chr5 (4-60)||(42911349-42911408)


Alignment Details
Target: chr4 (Bit Score: 321; Significance: 0; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 4 - 357
Target Start/End: Original strand, 28607166 - 28607521
Alignment:
Q  4 tctcacacacttctacac--acagaagctttgtattctcacttctgcttcaatgctttccttcaattccattgcctctatttataggggaaatgagccgt 101  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28607166 tctcacacacttctacacacacagaagctttgtattttcacttctgcttcgatgctttccttcaattccattgcctctatttataggggaaatgagccgt 28607265  T
Q  102 aagagttggatttggttcacacactcttacaccaaaagtcatggtattcaaagtgtgaaacttgaaatgaattgcaagccttcacacttttctgcacagc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28607266 aagagttggatttggttcacacactcttacaccaaaagtcatgacattcagagtgtgaaacttgaaatgaattgcaagccttcacacttttctgcacagc 28607365  T
Q  202 aagctatgcctagccatgtctctccaccgtaagctatatcatagctttcctatttgtagaaaaatgcatccttgcattaaataggtagaagactatttac 301  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28607366 aagctatgcctagccatgtctctccaccgtaagctataccatagctttcctatttgtagaaaaatgcatccttgcattaaataggtagaagactatttac 28607465  T
Q  302 aattacttgtagtaattgtctttggctggaaacaatacccacacgtggtggggcca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28607466 aattacttgtagtaattgtctttggctggaaacaatacccacacgtggtggggcca 28607521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 4 - 357
Target Start/End: Original strand, 28611928 - 28612283
Alignment:
Q  4 tctcacacacttctacac--acagaagctttgtattctcacttctgcttcaatgctttccttcaattccattgcctctatttataggggaaatgagccgt 101  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28611928 tctcacacacttctacacacacagaagctttgtattttcacttctgcttcgatgctttccttcaattccattgcctctatttataggggaaatgagccgt 28612027  T
Q  102 aagagttggatttggttcacacactcttacaccaaaagtcatggtattcaaagtgtgaaacttgaaatgaattgcaagccttcacacttttctgcacagc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28612028 aagagttggatttggttcacacactcttacaccaaaagtcatgacattcagagtgtgaaacttgaaatgaattgcaagccttcacacttttctgcacagc 28612127  T
Q  202 aagctatgcctagccatgtctctccaccgtaagctatatcatagctttcctatttgtagaaaaatgcatccttgcattaaataggtagaagactatttac 301  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28612128 aagctatgcctagccatgtctctccaccgtaagctataccatagctttcctatttgtagaaaaatgcatccttgcattaaataggtagaagactatttac 28612227  T
Q  302 aattacttgtagtaattgtctttggctggaaacaatacccacacgtggtggggcca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28612228 aattacttgtagtaattgtctttggctggaaacaatacccacacgtggtggggcca 28612283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 359 - 411
Target Start/End: Complemental strand, 14177959 - 14177907
Alignment:
Q  359 atttttgcaatttagattgccaagatacagctccccctgcaaaagtaaacaca 411  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14177959 atttttgcaatttagattgccaagatacagctccccctgcaaaagtaaacaca 14177907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 359 - 411
Target Start/End: Original strand, 28607914 - 28607966
Alignment:
Q  359 atttttgcaatttagattgccaagatacagctccccctgcaaaagtaaacaca 411  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28607914 atttttgcaatttagattgccaagatacagctccccctgcaaaagtaaacaca 28607966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 11104474 - 11104424
Alignment:
Q  4 tctcacacacttctacacacagaagctttgtattctcacttctgcttcaatg 55  Q
    ||||||||||||||||||| |||||||||||||| | |||||||||||||||    
T  11104474 tctcacacacttctacacatagaagctttgtatt-tgacttctgcttcaatg 11104424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 14178696 - 14178646
Alignment:
Q  4 tctcacacacttctacacaca--gaagctttgtattctcacttctgcttca 52  Q
    |||||||||||||||||||||  ||||||||||||| ||||||||||||||    
T  14178696 tctcacacacttctacacacacagaagctttgtattttcacttctgcttca 14178646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 14173942 - 14173892
Alignment:
Q  4 tctcacacacttctacacaca--gaagctttgtattctcacttctgcttca 52  Q
    |||||||||||||||||||||  ||| ||||||||| ||||||||||||||    
T  14173942 tctcacacacttctacacacacagaaactttgtattttcacttctgcttca 14173892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 44161591 - 44161538
Alignment:
Q  4 tctcacacacttctacacacagaagctttgt-attctcacttctgcttcaatgc 56  Q
    |||||||||| ||||||||||||||||||||  || ||||||||||||| ||||    
T  44161591 tctcacacacctctacacacagaagctttgtgtttttcacttctgcttcgatgc 44161538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 273; Significance: 1e-152; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 57 - 357
Target Start/End: Complemental strand, 34907056 - 34906756
Alignment:
Q  57 tttccttcaattccattgcctctatttataggggaaatgagccgtaagagttggatttggttcacacactcttacaccaaaagtcatggtattcaaagtg 156  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||    
T  34907056 tttctttcaattctattgcctctatttataggggaaatgagccgtaagagttggatttggttcacacactcttacaccaaaagtcatgacattcagagtg 34906957  T
Q  157 tgaaacttgaaatgaattgcaagccttcacacttttctgcacagcaagctatgcctagccatgtctctccaccgtaagctatatcatagctttcctattt 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  34906956 tgaaacttgaaatgaattgcaagccttcacacttttctgcacagcaagctatgcctagccatgtctctccaccgtaagctataccatagctttcctattt 34906857  T
Q  257 gtagaaaaatgcatccttgcattaaataggtagaagactatttacaattacttgtagtaattgtctttggctggaaacaatacccacacgtggtggggcc 356  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34906856 gtagaaaaattcatccttgcattaaataggtagaagactatttacaattacttgtagtaattgtctttggctggaaacaatacccacacgtggtggggcc 34906757  T
Q  357 a 357  Q
    |    
T  34906756 a 34906756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 34907144 - 34907092
Alignment:
Q  4 tctcacacacttctacacaca--gaagctttgtattctcacttctgcttcaat 54  Q
    |||||||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  34907144 tctcacacacttctacacacacagaagctttgtattttcacttctgcttcaat 34907092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 4 - 357
Target Start/End: Complemental strand, 8539188 - 8538835
Alignment:
Q  4 tctcacacacttctacacaca--gaagctttgtattctcacttctgcttcaatgctttccttcaattccattgcctctatttataggggaaatgagccgt 101  Q
    |||||||||||||||||||||  ||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||| |    
T  8539188 tctcacacacttctacacacacagaagctttgtattttcacttctgcttcgatgctttccttcaattccat-gcctctatttataggggaaataagccat 8539090  T
Q  102 aagagttggatttggttcacacactcttacaccaaaagtcatggtattcaaagtgtgaaacttgaaatgaattgcaagccttcacacttttctgcacagc 201  Q
    ||||||||||  | |||||||| ||||||||||||||||||||  ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8539089 aagagttggaaatagttcacac-ctcttacaccaaaagtcatgacattcagagtgtgaaacttggaatgaattgcaagccttcacacttttctgcacagc 8538991  T
Q  202 aagctatgcctagccatgtctctccaccgtaagctatatcatagctttcctatttgtagaaaaatgcatccttgcattaaataggtagaagactatttac 301  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||  ||||||||||| |||     
T  8538990 aagctatgcctagccatgtctctccaccttaagctataccatagctttcctatttgtagaaaaatgcatcattgcattaaatgagtagaagactagttat 8538891  T
Q  302 aa-ttacttgtagtaattgtctttggctggaaacaatacccacacgtggtggggcca 357  Q
    || ||| || |||||||||||||||||||| |||| |||||||| ||||||||||||    
T  8538890 aatttatttatagtaattgtctttggctgg-aacagtacccacatgtggtggggcca 8538835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 212 - 357
Target Start/End: Complemental strand, 2308905 - 2308760
Alignment:
Q  212 tagccatgtctctccaccgtaagctatatcatagctttcctatttgtagaaaaatgcatccttgcattaaataggtagaagactatttacaattacttgt 311  Q
    |||||||||||||||||||||||||||| ||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2308905 tagccatgtctctccaccgtaagctataccatagttttcctatttatagaaaaatacatccttgcattaaataggtagaagactatttacaattacttgt 2308806  T
Q  312 agtaattgtctttggctggaaacaatacccacacgtggtggggcca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  2308805 agtaattgtctttggctggaaacaatacccacacgtggtggggcca 2308760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 1e-54; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 6 - 295
Target Start/End: Complemental strand, 17124176 - 17123887
Alignment:
Q  6 tcacacacttctacacacagaagctttgtattctcacttctgcttcaatgctttccttcaattccattgcctctatttataggggaaatgagccgtaaga 105  Q
    |||||||||||| |||||| || | || |||  ||| |||| |||| ||||||||||||| | |||||| ||||||||||| |  |||  ||||||||||    
T  17124176 tcacacacttctgcacacaaaaacattatatattcatttctacttcgatgctttccttcattgccattgactctatttataaga-aaacaagccgtaaga 17124078  T
Q  106 gttggatttggttcacacactcttacaccaaaagtcatggtattcaaagtgtgaaacttgaaatgaattgcaagccttcacacttttctgcacagcaagc 205  Q
    ||| || || ||||||| | ||||||||||||||||||   ||||||||||||||||||| |||||||||||| | |||||||||||||||  ||||||     
T  17124077 gtttgaattagttcaca-attcttacaccaaaagtcataacattcaaagtgtgaaacttggaatgaattgcaaacattcacacttttctgctaagcaaga 17123979  T
Q  206 tatgcctagccatgtctctccaccgtaagctatatcatagctttcctatttgtagaaa--aatgcatccttgcattaaataggtagaagact 295  Q
    || ||||||||||| ||||||||| |||||||||  |||| |||||||||||||||||  ||||| |||||||||||||||  |||||||||    
T  17123978 taagcctagccatgcctctccaccttaagctatactatagttttcctatttgtagaaaataatgcttccttgcattaaataaatagaagact 17123887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 359 - 411
Target Start/End: Complemental strand, 12934689 - 12934637
Alignment:
Q  359 atttttgcaatttagattgccaagatacagctccccctgcaaaagtaaacaca 411  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12934689 atttttgcaatttagattgccaagatacagctccccctgcaaaagtaaacaca 12934637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 12930681 - 12930629
Alignment:
Q  4 tctcacacacttctacacaca--gaagctttgtattctcacttctgcttcaat 54  Q
    |||||||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  12930681 tctcacacacttctacacacacagaagctttgtattttcacttctgcttcaat 12930629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 12935427 - 12935375
Alignment:
Q  4 tctcacacacttctacacaca--gaagctttgtattctcacttctgcttcaat 54  Q
    |||||||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  12935427 tctcacacacttctacacacacagaagctttgtattttcacttctgcttcaat 12935375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 295
Target Start/End: Complemental strand, 17121801 - 17121733
Alignment:
Q  229 cgtaagctatatcatagctttcctatttgtaga--aaaatgcatccttgcattaaataggtagaagact 295  Q
    ||||||||||  |||| ||||||||||||||||  ||||||| |||||||||||||||  |||||||||    
T  17121801 cgtaagctatgccatatctttcctatttgtagaaaaaaatgcttccttgcattaaatacatagaagact 17121733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 357
Target Start/End: Complemental strand, 12930390 - 12930336
Alignment:
Q  301 caattacttgtagtaattgtctttggctggaaacaatacccacacgtggtggggcca 357  Q
    ||||| ||||||| ||||||||||||||||  |||  ||||||||||||||||||||    
T  12930390 caattgcttgtagcaattgtctttggctgg--acataacccacacgtggtggggcca 12930336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 357
Target Start/End: Complemental strand, 12935136 - 12935082
Alignment:
Q  301 caattacttgtagtaattgtctttggctggaaacaatacccacacgtggtggggcca 357  Q
    ||||| ||||||| ||||||||||||||||  |||  ||||||||||||||||||||    
T  12935136 caattgcttgtagcaattgtctttggctgg--acataacccacacgtggtggggcca 12935082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 6e-44; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 4 - 142
Target Start/End: Original strand, 37040786 - 37040927
Alignment:
Q  4 tctcacacacttctacac--acagaagctttgtattctcacttctgcttcaatgctttccttcaattccattgcctctatttataggggaaatg-agccg 100  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||| |  ||||| ||||||||||| | |||||| |||||    
T  37040786 tctcacacacttctacacacacagaagctttgtattttcacttctgcttcaatgctttccttcactatcattgtctctatttataagagaaatgaagccg 37040885  T
Q  101 taagagttggatttggttcacacactcttacaccaaaagtca 142  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  37040886 taagagttggatttggttcacacactcttacactaaaagtca 37040927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 411
Target Start/End: Complemental strand, 15300475 - 15300423
Alignment:
Q  359 atttttgcaatttagattgccaagatacagctccccctgcaaaagtaaacaca 411  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||| |||||||    
T  15300475 atttttgcaatttagattgccaagatatagctcaccctgcaaaagcaaacaca 15300423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 15302949 - 15302891
Alignment:
Q  4 tctcacacacttctacacaca--gaagctttgtattctcacttctgcttcaatgctttc 60  Q
    |||||||||||||||||||||  ||||||||||||| ||| ||||||||| ||||||||    
T  15302949 tctcacacacttctacacacacagaagctttgtattttcaattctgcttcgatgctttc 15302891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 15290244 - 15290184
Alignment:
Q  3 ttctcacacacttctacacacagaagc---tttgtattctcacttctgcttcaatgctttc 60  Q
    |||||||||||||||||||||||||||   |||||||| ||||||||||| | ||||||||    
T  15290244 ttctcacacacttctacacacagaagcttttttgtattttcacttctgctacgatgctttc 15290184  T

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Target: chr3 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 285 - 357
Target Start/End: Complemental strand, 51298598 - 51298526
Alignment:
Q  285 ggtagaagactatttacaattacttgtagtaattgtctttggctggaaacaatacccacacgtggtggggcca 357  Q
    ||||||| ||||||| |||||||||||||||||||| ||||||  ||||||||| ||||||||||||||||||    
T  51298598 ggtagaaaactatttgcaattacttgtagtaattgtttttggccagaaacaatagccacacgtggtggggcca 51298526  T

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Target: chr5 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 29107233 - 29107291
Alignment:
Q  4 tctcacacacttctacacacaga--agctttgtattctcacttctgcttcaatgctttc 60  Q
    ||||||||||||||||| |||||  |||||||||||  |||||||||||| ||||||||    
T  29107233 tctcacacacttctacatacagagaagctttgtatttccacttctgcttcgatgctttc 29107291  T

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Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 42911349 - 42911408
Alignment:
Q  4 tctcacacacttct--acacacagaagctttgt-attctcacttctgcttcaatgctttc 60  Q
    ||||||||||||||  |||||||||||||||||  || ||||||||||||| ||||||||    
T  42911349 tctcacacacttctacacacacagaagctttgtgtttttcacttctgcttcgatgctttc 42911408  T

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