View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1117_low_11 (Length: 233)

Name: NF1117_low_11
Description: NF1117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1117_low_11
NF1117_low_11
[»] chr3 (80 HSPs)
chr3 (88-215)||(10153458-10153585)
chr3 (88-215)||(26788528-26788655)
chr3 (88-215)||(26794118-26794245)
chr3 (88-215)||(37615647-37615774)
chr3 (90-215)||(14672925-14673050)
chr3 (88-215)||(418256-418383)
chr3 (88-215)||(5221660-5221787)
chr3 (88-215)||(26889711-26889838)
chr3 (88-215)||(31422276-31422403)
chr3 (88-215)||(5106607-5106734)
chr3 (88-215)||(6598974-6599101)
chr3 (88-215)||(6605654-6605781)
chr3 (88-215)||(10846007-10846133)
chr3 (88-215)||(16489393-16489520)
chr3 (88-215)||(16623778-16623905)
chr3 (88-215)||(16634107-16634234)
chr3 (88-215)||(16640717-16640844)
chr3 (88-215)||(43161382-43161509)
chr3 (88-215)||(43167619-43167746)
chr3 (88-215)||(48423624-48423751)
chr3 (88-215)||(48430402-48430529)
chr3 (88-215)||(1332784-1332910)
chr3 (88-182)||(13251008-13251102)
chr3 (88-182)||(13257654-13257748)
chr3 (92-215)||(5149695-5149818)
chr3 (88-215)||(53380075-53380201)
chr3 (88-215)||(53386727-53386853)
chr3 (88-182)||(41201521-41201615)
chr3 (88-215)||(16747562-16747689)
chr3 (88-182)||(23704492-23704586)
chr3 (88-182)||(23722948-23723042)
chr3 (88-182)||(23741404-23741498)
chr3 (88-182)||(30066237-30066331)
chr3 (88-177)||(14499621-14499710)
chr3 (91-182)||(15726658-15726749)
chr3 (88-215)||(16758294-16758421)
chr3 (88-182)||(11070359-11070453)
chr3 (88-182)||(11165253-11165347)
chr3 (88-174)||(41092070-41092156)
chr3 (88-180)||(15692001-15692093)
chr3 (102-215)||(3690875-3690988)
chr3 (102-215)||(10904483-10904596)
chr3 (102-215)||(10911155-10911268)
chr3 (102-215)||(20057140-20057253)
chr3 (102-215)||(20063778-20063891)
chr3 (104-176)||(15825958-15826030)
chr3 (104-176)||(17710331-17710403)
chr3 (104-176)||(19809323-19809395)
chr3 (102-215)||(10003893-10004006)
chr3 (102-215)||(10010540-10010653)
chr3 (106-174)||(4710595-4710663)
chr3 (104-176)||(10236133-10236205)
chr3 (104-176)||(13315927-13315999)
chr3 (102-175)||(6608775-6608848)
chr3 (102-175)||(12482724-12482797)
chr3 (102-175)||(5201519-5201592)
chr3 (130-175)||(5420070-5420115)
chr3 (130-175)||(5426468-5426513)
chr3 (130-175)||(15584485-15584530)
chr3 (130-175)||(15591143-15591188)
chr3 (104-176)||(1145291-1145363)
chr3 (120-176)||(4291066-4291122)
chr3 (104-176)||(15991843-15991915)
chr3 (107-176)||(410493-410562)
chr3 (102-175)||(7986001-7986074)
chr3 (103-176)||(12891700-12891773)
chr3 (103-176)||(17252795-17252868)
chr3 (136-176)||(13321266-13321306)
chr3 (104-176)||(15343345-15343417)
chr3 (104-176)||(15349988-15350060)
chr3 (136-176)||(15397674-15397714)
chr3 (136-176)||(15404265-15404305)
chr3 (102-176)||(839540-839614)
chr3 (134-176)||(16333467-16333509)
chr3 (104-176)||(8720895-8720967)
chr3 (104-176)||(9072782-9072854)
chr3 (136-176)||(15337727-15337767)
chr3 (136-176)||(15360986-15361026)
chr3 (88-144)||(22643062-22643118)
chr3 (88-144)||(55023174-55023230)
[»] chr5 (58 HSPs)
chr5 (88-215)||(17706654-17706781)
chr5 (88-215)||(22062605-22062732)
chr5 (88-215)||(22265200-22265327)
chr5 (88-215)||(27663513-27663640)
chr5 (88-215)||(27670153-27670280)
chr5 (89-215)||(41097947-41098073)
chr5 (89-215)||(41769497-41769623)
chr5 (88-215)||(27608994-27609121)
chr5 (89-215)||(41776071-41776197)
chr5 (90-215)||(34294278-34294403)
chr5 (88-215)||(23584395-23584522)
chr5 (88-215)||(27615600-27615727)
chr5 (88-215)||(24471971-24472098)
chr5 (88-215)||(25107039-25107166)
chr5 (88-215)||(25166132-25166259)
chr5 (88-215)||(1692160-1692287)
chr5 (88-215)||(14994759-14994886)
chr5 (88-215)||(16355100-16355227)
chr5 (88-215)||(16361759-16361886)
chr5 (88-215)||(19992138-19992265)
chr5 (88-215)||(23610157-23610284)
chr5 (88-215)||(23841553-23841680)
chr5 (88-215)||(34565093-34565220)
chr5 (88-215)||(34571748-34571875)
chr5 (88-215)||(15001402-15001529)
chr5 (88-215)||(27687052-27687179)
chr5 (88-182)||(40707409-40707503)
chr5 (88-182)||(40714051-40714145)
chr5 (88-213)||(22334541-22334666)
chr5 (88-215)||(18038391-18038518)
chr5 (88-213)||(22327887-22328012)
chr5 (88-215)||(25406680-25406807)
chr5 (88-215)||(22133253-22133380)
chr5 (88-215)||(22139945-22140072)
chr5 (88-179)||(41294158-41294249)
chr5 (88-215)||(22588349-22588476)
chr5 (88-215)||(37286504-37286631)
chr5 (88-215)||(37293207-37293334)
chr5 (88-182)||(27517040-27517133)
chr5 (88-182)||(27523677-27523770)
chr5 (88-181)||(17284355-17284448)
chr5 (88-179)||(29477678-29477769)
chr5 (88-182)||(15236504-15236598)
chr5 (88-179)||(29471083-29471174)
chr5 (102-215)||(33726114-33726227)
chr5 (129-175)||(20776183-20776229)
chr5 (102-215)||(37544296-37544410)
chr5 (102-175)||(21667544-21667617)
chr5 (130-175)||(22410364-22410409)
chr5 (102-175)||(29316713-29316786)
chr5 (102-176)||(14359557-14359631)
chr5 (130-175)||(22258239-22258284)
chr5 (104-176)||(19768642-19768714)
chr5 (104-176)||(19775238-19775310)
chr5 (104-176)||(23250234-23250306)
chr5 (104-176)||(25808226-25808298)
chr5 (102-176)||(22325664-22325738)
chr5 (102-176)||(23337026-23337100)
[»] scaffold0044 (3 HSPs)
scaffold0044 (88-215)||(30782-30909)
scaffold0044 (88-215)||(72622-72749)
scaffold0044 (88-182)||(8347-8441)
[»] chr8 (26 HSPs)
chr8 (88-215)||(17669294-17669421)
chr8 (88-215)||(17675946-17676073)
chr8 (88-215)||(5534163-5534290)
chr8 (88-215)||(21915294-21915421)
chr8 (88-215)||(8354487-8354614)
chr8 (88-211)||(20019664-20019787)
chr8 (88-215)||(22084086-22084213)
chr8 (88-202)||(20013588-20013702)
chr8 (88-215)||(28455014-28455141)
chr8 (88-182)||(19111514-19111608)
chr8 (88-182)||(19117805-19117899)
chr8 (88-215)||(22123109-22123236)
chr8 (88-215)||(18855191-18855318)
chr8 (88-215)||(18865586-18865713)
chr8 (88-174)||(22115444-22115530)
chr8 (88-182)||(29123373-29123467)
chr8 (88-215)||(16882896-16883023)
chr8 (102-215)||(19496645-19496758)
chr8 (102-175)||(18065626-18065699)
chr8 (102-215)||(22048201-22048314)
chr8 (117-176)||(19905790-19905849)
chr8 (132-174)||(22124296-22124338)
chr8 (88-137)||(22122146-22122195)
chr8 (103-176)||(26934915-26934988)
chr8 (104-176)||(20023668-20023740)
chr8 (136-176)||(3216555-3216595)
[»] chr7 (45 HSPs)
chr7 (88-215)||(18164397-18164524)
chr7 (88-215)||(40523085-40523212)
chr7 (88-215)||(60400-60527)
chr7 (88-215)||(9510736-9510863)
chr7 (88-211)||(14337629-14337752)
chr7 (88-215)||(18176359-18176486)
chr7 (88-215)||(18183031-18183158)
chr7 (88-211)||(14331045-14331168)
chr7 (88-215)||(21937-22064)
chr7 (88-215)||(8201798-8201925)
chr7 (88-215)||(11366455-11366582)
chr7 (88-215)||(14655140-14655267)
chr7 (88-192)||(15022408-15022512)
chr7 (88-215)||(15155893-15156020)
chr7 (88-215)||(16407018-16407145)
chr7 (88-215)||(13684717-13684844)
chr7 (88-215)||(13691332-13691459)
chr7 (88-215)||(15162544-15162671)
chr7 (88-182)||(44786198-44786292)
chr7 (88-182)||(44792839-44792933)
chr7 (88-174)||(11232008-11232094)
chr7 (88-174)||(11238695-11238781)
chr7 (88-182)||(20702715-20702809)
chr7 (88-182)||(32767962-32768056)
chr7 (88-173)||(1347804-1347889)
chr7 (88-182)||(33395-33489)
chr7 (88-182)||(70489-70583)
chr7 (88-166)||(12703111-12703189)
chr7 (108-182)||(49051658-49051732)
chr7 (88-177)||(12704382-12704471)
chr7 (88-182)||(74597-74692)
chr7 (139-215)||(12703184-12703260)
chr7 (102-176)||(4318283-4318357)
chr7 (102-176)||(18531538-18531612)
chr7 (102-175)||(8706290-8706363)
chr7 (102-175)||(8719706-8719779)
chr7 (102-215)||(18585038-18585151)
chr7 (102-176)||(14148863-14148937)
chr7 (129-175)||(18553297-18553343)
chr7 (130-175)||(10869742-10869787)
chr7 (130-175)||(10875822-10875867)
chr7 (104-175)||(9410239-9410310)
chr7 (103-176)||(6016910-6016983)
chr7 (130-175)||(23519720-23519765)
chr7 (136-176)||(13570187-13570227)
[»] chr6 (56 HSPs)
chr6 (88-215)||(6980914-6981041)
chr6 (88-215)||(18194248-18194375)
chr6 (88-215)||(20649517-20649644)
chr6 (90-215)||(12762957-12763082)
chr6 (88-215)||(2869859-2869986)
chr6 (88-215)||(2876474-2876601)
chr6 (88-215)||(4233222-4233349)
chr6 (88-215)||(8229143-8229270)
chr6 (88-215)||(14059340-14059467)
chr6 (88-215)||(18931332-18931459)
chr6 (88-215)||(29587403-29587530)
chr6 (88-215)||(29593544-29593671)
chr6 (88-215)||(20060905-20061032)
chr6 (88-215)||(27327780-27327907)
chr6 (88-215)||(27388520-27388647)
chr6 (88-215)||(30694618-30694745)
chr6 (88-215)||(30597473-30597600)
chr6 (88-215)||(30637854-30637980)
chr6 (88-182)||(1538668-1538762)
chr6 (88-182)||(1544767-1544861)
chr6 (102-215)||(8797446-8797559)
chr6 (101-215)||(17031126-17031240)
chr6 (88-174)||(26130765-26130851)
chr6 (102-215)||(27430021-27430134)
chr6 (102-182)||(20802044-20802124)
chr6 (104-176)||(34832949-34833021)
chr6 (102-176)||(16372153-16372227)
chr6 (102-175)||(27186005-27186078)
chr6 (102-175)||(27207841-27207914)
chr6 (102-175)||(27241314-27241387)
chr6 (102-175)||(27263162-27263235)
chr6 (102-175)||(28314867-28314940)
chr6 (102-182)||(17037073-17037153)
chr6 (104-176)||(25595092-25595164)
chr6 (102-182)||(28258192-28258272)
chr6 (102-182)||(28264816-28264896)
chr6 (102-182)||(28336941-28337021)
chr6 (102-182)||(28343565-28343645)
chr6 (102-176)||(22331734-22331808)
chr6 (102-175)||(32564980-32565053)
chr6 (104-175)||(14098922-14098993)
chr6 (102-175)||(16551758-16551831)
chr6 (102-175)||(16577122-16577195)
chr6 (102-175)||(16618185-16618258)
chr6 (102-175)||(16628314-16628387)
chr6 (130-175)||(17016688-17016733)
chr6 (104-176)||(25111135-25111207)
chr6 (104-176)||(25117738-25117810)
chr6 (104-176)||(31316832-31316904)
chr6 (104-175)||(3708222-3708293)
chr6 (119-182)||(28287644-28287707)
chr6 (102-176)||(19808821-19808895)
chr6 (102-176)||(34369711-34369785)
chr6 (136-176)||(23277050-23277090)
chr6 (104-176)||(24314819-24314891)
chr6 (134-176)||(22759146-22759188)
[»] chr4 (51 HSPs)
chr4 (88-215)||(19780014-19780141)
chr4 (90-215)||(18024154-18024279)
chr4 (88-211)||(8048220-8048343)
chr4 (88-211)||(8054833-8054956)
chr4 (88-215)||(12475274-12475401)
chr4 (88-215)||(12481904-12482031)
chr4 (88-215)||(17962049-17962176)
chr4 (88-215)||(14268182-14268309)
chr4 (88-215)||(4772351-4772478)
chr4 (88-215)||(8385089-8385216)
chr4 (88-215)||(8391744-8391871)
chr4 (88-215)||(14074085-14074212)
chr4 (88-215)||(15256863-15256990)
chr4 (88-215)||(17808668-17808795)
chr4 (88-215)||(22194874-22195001)
chr4 (88-215)||(23954402-23954529)
chr4 (88-215)||(23961064-23961191)
chr4 (88-215)||(36884459-36884586)
chr4 (88-215)||(15148710-15148837)
chr4 (88-215)||(15383218-15383345)
chr4 (88-215)||(17089702-17089829)
chr4 (88-215)||(29040623-29040750)
chr4 (88-215)||(14298552-14298679)
chr4 (88-215)||(15321818-15321945)
chr4 (88-215)||(15362387-15362514)
chr4 (88-215)||(16231566-16231693)
chr4 (88-215)||(20115397-20115524)
chr4 (88-182)||(18295913-18296007)
chr4 (88-215)||(14305176-14305303)
chr4 (88-215)||(51493542-51493669)
chr4 (88-215)||(6873100-6873227)
chr4 (88-215)||(7900895-7901022)
chr4 (88-182)||(26284632-26284726)
chr4 (88-182)||(40478435-40478529)
chr4 (88-182)||(17810560-17810654)
chr4 (88-182)||(40471762-40471856)
chr4 (88-182)||(14757146-14757240)
chr4 (102-215)||(18071423-18071536)
chr4 (102-173)||(9271842-9271913)
chr4 (102-175)||(12349312-12349385)
chr4 (102-175)||(55795752-55795825)
chr4 (104-176)||(16956390-16956462)
chr4 (104-176)||(30234918-30234990)
chr4 (102-176)||(35170922-35170996)
chr4 (130-175)||(12299664-12299709)
chr4 (103-176)||(53433671-53433744)
chr4 (88-144)||(386078-386134)
chr4 (104-176)||(19941894-19941966)
chr4 (104-176)||(23081882-23081954)
chr4 (104-176)||(27710039-27710111)
chr4 (88-125)||(17991393-17991430)
[»] chr2 (45 HSPs)
chr2 (88-215)||(22320710-22320837)
chr2 (88-215)||(22326863-22326990)
chr2 (88-215)||(26877292-26877419)
chr2 (88-215)||(29233784-29233911)
chr2 (88-215)||(29347083-29347210)
chr2 (90-211)||(19489650-19489771)
chr2 (88-215)||(13306313-13306440)
chr2 (88-215)||(16986199-16986326)
chr2 (88-215)||(27216321-27216448)
chr2 (88-215)||(28431636-28431763)
chr2 (88-182)||(27617584-27617678)
chr2 (88-215)||(9340538-9340665)
chr2 (88-215)||(9489172-9489299)
chr2 (88-215)||(9608433-9608560)
chr2 (88-215)||(24913688-24913815)
chr2 (88-215)||(27599519-27599646)
chr2 (95-215)||(16922787-16922907)
chr2 (88-215)||(23171293-23171420)
chr2 (88-215)||(23582550-23582677)
chr2 (88-182)||(16997338-16997432)
chr2 (88-182)||(17003971-17004065)
chr2 (88-215)||(1843338-1843465)
chr2 (88-215)||(12829325-12829452)
chr2 (96-182)||(16928644-16928730)
chr2 (88-182)||(10101369-10101463)
chr2 (104-176)||(37318569-37318641)
chr2 (102-182)||(10866660-10866740)
chr2 (102-182)||(10873827-10873907)
chr2 (102-175)||(27369597-27369670)
chr2 (102-175)||(27376107-27376180)
chr2 (103-175)||(24872146-24872218)
chr2 (103-175)||(24880031-24880103)
chr2 (104-176)||(41604471-41604543)
chr2 (104-176)||(41610368-41610440)
chr2 (117-176)||(27197179-27197238)
chr2 (130-175)||(44380959-44381004)
chr2 (130-175)||(44387629-44387674)
chr2 (104-176)||(13970109-13970181)
chr2 (104-176)||(24715006-24715078)
chr2 (104-176)||(45057165-45057237)
chr2 (134-176)||(24640730-24640772)
chr2 (103-176)||(19645716-19645789)
chr2 (103-176)||(30970718-30970791)
chr2 (136-176)||(21139043-21139083)
chr2 (136-176)||(21147061-21147101)
[»] scaffold0155 (1 HSPs)
scaffold0155 (88-215)||(9540-9667)
[»] scaffold0052 (3 HSPs)
scaffold0052 (88-215)||(10614-10741)
scaffold0052 (88-215)||(57036-57163)
scaffold0052 (88-215)||(776-903)
[»] chr1 (32 HSPs)
chr1 (88-215)||(20215652-20215779)
chr1 (88-215)||(46157044-46157171)
chr1 (88-215)||(43078695-43078822)
chr1 (88-215)||(18599829-18599956)
chr1 (90-215)||(44844608-44844734)
chr1 (88-182)||(51328402-51328496)
chr1 (88-182)||(51335036-51335130)
chr1 (88-181)||(41478300-41478393)
chr1 (88-215)||(21828969-21829096)
chr1 (88-215)||(21844482-21844609)
chr1 (88-182)||(1011011-1011105)
chr1 (102-215)||(16345512-16345625)
chr1 (102-215)||(16352160-16352273)
chr1 (102-215)||(41356025-41356138)
chr1 (102-215)||(41348588-41348701)
chr1 (102-215)||(47659472-47659585)
chr1 (117-176)||(20524968-20525027)
chr1 (102-176)||(19063814-19063888)
chr1 (102-176)||(19105047-19105121)
chr1 (102-176)||(19111704-19111778)
chr1 (102-175)||(27898397-27898470)
chr1 (102-175)||(43063014-43063087)
chr1 (102-175)||(44756400-44756473)
chr1 (102-175)||(49334867-49334940)
chr1 (130-175)||(18626041-18626086)
chr1 (104-176)||(21806940-21807012)
chr1 (104-176)||(33385963-33386035)
chr1 (104-176)||(33392607-33392679)
chr1 (103-176)||(8305430-8305503)
chr1 (102-215)||(33394102-33394215)
chr1 (103-176)||(50887491-50887564)
chr1 (136-176)||(21835660-21835700)
[»] scaffold0028 (4 HSPs)
scaffold0028 (88-215)||(67763-67890)
scaffold0028 (88-215)||(57299-57426)
scaffold0028 (88-215)||(41792-41919)
scaffold0028 (104-176)||(7298-7370)
[»] scaffold0140 (1 HSPs)
scaffold0140 (88-215)||(38959-39086)
[»] scaffold0032 (1 HSPs)
scaffold0032 (88-215)||(109048-109175)
[»] scaffold0061 (1 HSPs)
scaffold0061 (91-215)||(59187-59311)
[»] scaffold0017 (1 HSPs)
scaffold0017 (91-215)||(139322-139446)
[»] scaffold0109 (1 HSPs)
scaffold0109 (88-215)||(26897-27024)
[»] scaffold0005 (1 HSPs)
scaffold0005 (88-182)||(307384-307478)
[»] scaffold0525 (1 HSPs)
scaffold0525 (88-182)||(3600-3694)
[»] scaffold0029 (2 HSPs)
scaffold0029 (120-182)||(105634-105696)
scaffold0029 (88-182)||(125837-125931)
[»] scaffold0349 (1 HSPs)
scaffold0349 (88-177)||(12715-12804)
[»] scaffold0180 (1 HSPs)
scaffold0180 (102-173)||(3006-3077)
[»] scaffold0003 (1 HSPs)
scaffold0003 (102-215)||(57229-57342)
[»] scaffold0431 (1 HSPs)
scaffold0431 (104-176)||(12738-12810)
[»] scaffold0216 (1 HSPs)
scaffold0216 (88-182)||(8601-8695)
[»] scaffold0156 (1 HSPs)
scaffold0156 (104-174)||(3068-3138)
[»] scaffold0144 (1 HSPs)
scaffold0144 (102-175)||(32050-32123)
[»] scaffold0141 (1 HSPs)
scaffold0141 (102-215)||(38297-38410)
[»] scaffold0049 (1 HSPs)
scaffold0049 (102-215)||(76402-76515)
[»] scaffold0004 (1 HSPs)
scaffold0004 (104-176)||(78508-78580)
[»] scaffold0553 (1 HSPs)
scaffold0553 (102-175)||(9084-9157)
[»] scaffold0126 (1 HSPs)
scaffold0126 (102-175)||(3816-3889)
[»] scaffold0133 (1 HSPs)
scaffold0133 (130-175)||(22499-22544)
[»] scaffold0009 (1 HSPs)
scaffold0009 (104-176)||(74290-74362)
[»] scaffold0560 (1 HSPs)
scaffold0560 (136-182)||(5570-5616)
[»] scaffold0259 (1 HSPs)
scaffold0259 (102-176)||(10471-10545)
[»] scaffold0233 (1 HSPs)
scaffold0233 (102-176)||(14278-14352)
[»] scaffold0051 (1 HSPs)
scaffold0051 (102-176)||(37001-37075)
[»] scaffold0013 (1 HSPs)
scaffold0013 (102-176)||(9634-9708)
[»] scaffold0780 (1 HSPs)
scaffold0780 (103-176)||(408-481)


Alignment Details
Target: chr3 (Bit Score: 116; Significance: 4e-59; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 10153458 - 10153585
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10153458 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 10153557  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||||| ||||| |||||||||||    
T  10153558 acttgtttgtgtgtttgtgcgatctgtg 10153585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 26788528 - 26788655
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  26788528 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 26788627  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  26788628 acttgtttatgtgtttatgcgatctgtg 26788655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 26794118 - 26794245
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  26794118 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 26794217  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  26794218 acttgtttatgtgtttatgcgatctgtg 26794245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 37615774 - 37615647
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  37615774 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 37615675  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  37615674 acttgtttatgtgtttatgcgatctgtg 37615647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 90 - 215
Target Start/End: Original strand, 14672925 - 14673050
Alignment:
Q  90 taggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaac 189  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||| |||||||||||||||    
T  14672925 taggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgcgatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaac 14673024  T
Q  190 ttgtttgtatgtttatgcgatctgtg 215  Q
    |||||| | |||||||||||||||||    
T  14673025 ttgtttatgtgtttatgcgatctgtg 14673050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 418383 - 418256
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  418383 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 418284  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  418283 acttgtttatgtgtttatgcgatctgtg 418256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 5221787 - 5221660
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||      
T  5221787 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgacacggcgagtaagaactctcgcctcgcgagcacagccaggatat 5221688  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||||||||||    
T  5221687 agttgcttgagtgtttgtgcgatctgtg 5221660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 26889838 - 26889711
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  26889838 tgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctctcgcctcgcgagtacaaccaggatga 26889739  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  26889738 acttgattatgtgtttgtgcgatctgtg 26889711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 31422276 - 31422403
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||| |||||||  |||||||||||| |||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  31422276 tgtaggatcagagggaacctagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 31422375  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  31422376 acttgtttatgtgtttatgcgatctgtg 31422403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 5106607 - 5106734
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| || |||||||||| ||||||||||||| |||||| ||||||||| |||||||||| |||||||||||||||| ||||| |||||||    
T  5106607 tgtaggatcagagggagcccagaacaaccttagtttgggagatgagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaactaggatga 5106706  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  5106707 acttgtttatgtgtttatgcgatctgtg 5106734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 6599101 - 6598974
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  6599101 tgtaggatcagagggaacccagaacaaccttagtttgggagatgagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 6599002  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | ||||| ||| |||||||    
T  6599001 acttgtttatgtgtttgtgcaatctgtg 6598974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 6605781 - 6605654
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  6605781 tgtaggatcagagggaacccagaacaaccttagtttgggagatgagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 6605682  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | ||||| ||| |||||||    
T  6605681 acttgtttatgtgtttgtgcaatctgtg 6605654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 10846007 - 10846133
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||| ||||    
T  10846007 tgtaggatcagagggaacccagaacaaccttaatttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatga 10846106  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||||| || || |||||||||||    
T  10846107 acttgtttgtgtg-ttgtgcgatctgtg 10846133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 16489393 - 16489520
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||     
T  16489393 tgtaggatcagagggaacccagaacaactttagtttgggagatgagtggtactcgccacggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 16489492  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| |||  ||||| |||||||||||    
T  16489493 acttgcttgagtgtttgtgcgatctgtg 16489520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 16623778 - 16623905
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||| |||     
T  16623778 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgt 16623877  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||||||||||    
T  16623878 agttgcttgagtgtttgtgcgatctgtg 16623905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 16634234 - 16634107
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  16634234 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 16634135  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  16634134 acttgattatgtgtttgtgcgatctgtg 16634107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 16640844 - 16640717
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  16640844 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 16640745  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  16640744 acttgattatgtgtttgtgcgatctgtg 16640717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 43161509 - 43161382
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  43161509 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 43161410  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  43161409 acttgattatgtgtttgtgcgatctgtg 43161382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 43167746 - 43167619
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  43167746 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 43167647  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  43167646 acttgattatgtgtttgtgcgatctgtg 43167619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 48423751 - 48423624
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||||||||||| |||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  48423751 tgtaggatcagagggaacccagaacaagctcagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 48423652  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  48423651 acttgcttatgtgtttgtgcgatctgtg 48423624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 48430529 - 48430402
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||||||||||| |||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  48430529 tgtaggatcagagggaacccagaacaagctcagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 48430430  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  48430429 acttgcttatgtgtttgtgcgatctgtg 48430402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 1332784 - 1332910
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||| | |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  1332784 tgtaggatcagagggaacccagaacaagcttagtt-gtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 1332882  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  1332883 acttgattatgtgtttgtgcgatctgtg 1332910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 13251102 - 13251008
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  13251102 tgtaggatcagagggaacccagaacaagcttagtttggaagttgagtggtgctcgccatggcgagtaagaactctcgcctcgcgagtacaaccag 13251008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 13257748 - 13257654
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  13257748 tgtaggatcagagggaacccagaacaagcttagtttggaagttgagtggtgctcgccatggcgagtaagaactctcgcctcgcgagtacaaccag 13257654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 215
Target Start/End: Original strand, 5149695 - 5149818
Alignment:
Q  92 ggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaactt 191  Q
    ||||||||  |||||||||||||   ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| | ||    
T  5149695 ggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgtagtt 5149794  T
Q  192 gtttgtatgtttatgcgatctgtg 215  Q
    | |||  ||||| |||||||||||    
T  5149795 gcttgagtgtttgtgcgatctgtg 5149818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 53380075 - 53380201
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| | ||||| ||||| |||||||||| ||||||||||||||||||| |||||||||| |||||||||||||| | |||| ||| ||||    
T  53380075 tgtaggatcagaggggacccataacaaccttagtttggaagttgagtggtactcgccatggcgagtaaggactctcgcctcgcgggtacaatcagaatga 53380174  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||||| | ||| |||||||||||    
T  53380175 acttgtttgtgt-tttgtgcgatctgtg 53380201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 53386727 - 53386853
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| | ||||| ||||| |||||||||| ||||||||||||||||||| |||||||||| |||||||||||||| | |||| ||| ||||    
T  53386727 tgtaggatcagaggggacccataacaaccttagtttggaagttgagtggtactcgccatggcgagtaaggactctcgcctcgcgggtacaatcagaatga 53386826  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||||| | ||| |||||||||||    
T  53386827 acttgtttgtgt-tttgtgcgatctgtg 53386853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 41201521 - 41201615
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  |||||||||||||   ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41201521 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccag 41201615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 16747562 - 16747689
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    |||||||||||||| | |||||||||| |||||||||||||  |||||  |||||||| ||||||| ||  ||||||||||||||| |||||||||| ||    
T  16747562 tgtaggatcagagaaagcccagaacaaccttagtttgggagaagagtgtcactcgccatggcgagtgagtgctctcgcctcgcgagtacaaccaggacga 16747661  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | ||||| |||||||||||    
T  16747662 acttgtttatgtgtttgtgcgatctgtg 16747689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 23704492 - 23704586
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  |||||||||||||   |||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23704492 tgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccag 23704586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 23722948 - 23723042
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  |||||||||||||   |||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23722948 tgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccag 23723042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 23741404 - 23741498
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  |||||||||||||   |||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23741404 tgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccag 23741498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 30066331 - 30066237
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  |||||||||||||   ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  30066331 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacatccag 30066237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 88 - 177
Target Start/End: Complemental strand, 14499710 - 14499621
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcaca 177  Q
    ||||||||||||  |||||||||||||   ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  14499710 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcaca 14499621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 182
Target Start/End: Original strand, 15726658 - 15726749
Alignment:
Q  91 aggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    |||||||||  |||||||||||||   ||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15726658 aggatcagattgaacccagaacaacactagtttgggagataagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccag 15726749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 16758294 - 16758421
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    |||||||||||| | | |||||||||| |||||||||||||  |||||  |||||||| ||||||| ||  ||||||||||||||| |||||||||| ||    
T  16758294 tgtaggatcagataaagcccagaacaaccttagtttgggagaagagtgtcactcgccatggcgagtgagtgctctcgcctcgcgagtacaaccaggacga 16758393  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | ||||| |||||||||||    
T  16758394 acttgtttatgtgtttgtgcgatctgtg 16758421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 11070453 - 11070359
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  |||||||||||||   |||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  11070453 tgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacatccag 11070359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 11165253 - 11165347
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  ||||||| |||||   ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  11165253 tgtaggatcagattgaacccaaaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacatccag 11165347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 41092070 - 41092156
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagc 174  Q
    ||||||| ||||| |||||||||||||  |||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||    
T  41092070 tgtaggagcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtgagaactctcgcctcgcgagc 41092156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 88 - 180
Target Start/End: Original strand, 15692001 - 15692093
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaacc 180  Q
    ||||||||||||  |||||||||||||   ||||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||| ||||    
T  15692001 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactctccatggcgagtaagaactctcgcctcgcaagcataacc 15692093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 3690988 - 3690875
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtttgtatgt 201  Q
    |||||||||||||  | |||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| |||||||| ||| | ||| |||  |||    
T  3690988 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 3690889  T
Q  202 ttatgcgatctgtg 215  Q
    || |||||||||||    
T  3690888 ttgtgcgatctgtg 3690875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 10904596 - 10904483
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtttgtatgt 201  Q
    |||||||||||||  | |||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| |||||||| ||| | ||| |||  |||    
T  10904596 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 10904497  T
Q  202 ttatgcgatctgtg 215  Q
    || |||||||||||    
T  10904496 ttgtgcgatctgtg 10904483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 10911268 - 10911155
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtttgtatgt 201  Q
    |||||||||||||  | |||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| |||||||| ||| | ||| |||  |||    
T  10911268 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 10911169  T
Q  202 ttatgcgatctgtg 215  Q
    || |||||||||||    
T  10911168 ttgtgcgatctgtg 10911155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 20057140 - 20057253
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtttgtatgt 201  Q
    |||||||||||||  | |||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| |||||||| ||| | ||| |||  |||    
T  20057140 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaaggactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 20057239  T
Q  202 ttatgcgatctgtg 215  Q
    || |||||||||||    
T  20057240 ttgtgcgatctgtg 20057253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 20063778 - 20063891
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtttgtatgt 201  Q
    |||||||||||||  | |||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| |||||||| ||| | ||| |||  |||    
T  20063778 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaaggactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 20063877  T
Q  202 ttatgcgatctgtg 215  Q
    || |||||||||||    
T  20063878 ttgtgcgatctgtg 20063891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 15826030 - 15825958
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||  |||||||||||| ||||||||||||||||||||||||||||||    
T  15826030 acccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaagaactctcgcctcgcgagcac 15825958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 17710331 - 17710403
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||| |||||||||||| ||| ||||||||||||||||||||||||||    
T  17710331 acccagaacaactttagtttgggaattgaatggtactcgccaaggcaagtaagaactctcgcctcgcgagcac 17710403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 19809395 - 19809323
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||  |||||||||||| ||||||||||||||||||||||||||||||    
T  19809395 acccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaagaactctcgcctcgcgagcac 19809323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 10004006 - 10003893
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtttgtatgt 201  Q
    |||||||||||||  | |||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| |||||||| ||| | ||| |||  ||     
T  10004006 gaacccagaacaacttcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgg 10003907  T
Q  202 ttatgcgatctgtg 215  Q
    || |||||||||||    
T  10003906 ttgtgcgatctgtg 10003893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 10010653 - 10010540
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtttgtatgt 201  Q
    |||||||||||||  | |||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| |||||||| ||| | ||| |||  ||     
T  10010653 gaacccagaacaacttcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgg 10010554  T
Q  202 ttatgcgatctgtg 215  Q
    || |||||||||||    
T  10010553 ttgtgcgatctgtg 10010540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 4710663 - 4710595
Alignment:
Q  106 ccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagc 174  Q
    |||||||||  ||||||||||| ||||||||||||||||| ||||||| || |||||||||||||||||    
T  4710663 ccagaacaactttagtttgggatttgagtggtactcgccatggcgagtgaggactctcgcctcgcgagc 4710595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 10236133 - 10236205
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  |||||||||||  ||  |||||||||||| ||||||||||||||||||||||||||||||    
T  10236133 acccagaacaactttagtttgggaaatgtttggtactcgccatggcgagtaagaactctcgcctcgcgagcac 10236205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 13315927 - 13315999
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||   | |||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  13315927 acccagaacaacactggtttgggatttgagtggtactcgccatggcgagtaataactctcgcctcgcgagcac 13315999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 6608848 - 6608775
Alignment:
Q  102 gaacccagaacaagcttagtttgggagtt-gagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    |||||||||||||  |||||| ||||||| ||||||||||||||| |||||||||| ||||||||||||||||||    
T  6608848 gaacccagaacaacattagtt-gggagtttgagtggtactcgccatggcgagtaaggactctcgcctcgcgagca 6608775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 12482797 - 12482724
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||| |||||  |||||| || | ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  12482797 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 12482724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 5201592 - 5201519
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||| |||||  |||||| || | ||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  5201592 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcacctcgcgagca 5201519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 5420070 - 5420115
Alignment:
Q  130 tgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  5420070 tgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 5420115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 5426468 - 5426513
Alignment:
Q  130 tgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  5426468 tgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 5426513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 15584485 - 15584530
Alignment:
Q  130 tgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||    
T  15584485 tgagtggtactcgccatggcgagtaagaaccctcgcctcgcgagca 15584530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 15591143 - 15591188
Alignment:
Q  130 tgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||    
T  15591143 tgagtggtactcgccatggcgagtaagaaccctcgcctcgcgagca 15591188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 1145291 - 1145363
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||  | |||||||||| |||||| |||||| ||||||||||||||||    
T  1145291 acccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccctcgcctcgcgagcac 1145363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 4291122 - 4291066
Alignment:
Q  120 gtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||| |||  |||||||||||| |||||| |||||||||||||||||||||||    
T  4291122 gtttgggaattgtttggtactcgccatggcgagcaagaactctcgcctcgcgagcac 4291066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 15991843 - 15991915
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    ||||| |||||  ||||||||||| |||  |||||||||||| |||||||||| | |||||||||||||||||    
T  15991843 acccaaaacaactttagtttgggaattgtttggtactcgccatggcgagtaaggattctcgcctcgcgagcac 15991915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 410493 - 410562
Alignment:
Q  107 cagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    ||||||||  ||||||||||| |||  | |||||||||| |||||| |||||| ||||||||||||||||    
T  410493 cagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccctcgcctcgcgagcac 410562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 7986074 - 7986001
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||| |||||||  |||||||||||||||  | | |||||||| |||||||| | ||||||||||||||||||    
T  7986074 gaacctagaacaacattagtttgggagttggcttgaactcgccatggcgagtaggtactctcgcctcgcgagca 7986001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 12891773 - 12891700
Alignment:
Q  103 aacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||   ||||||||| | |||  | |||||||||| |||||||||||| |||||||||||||||||    
T  12891773 aacccagaacagcattagtttggaacttgtcttgtactcgccatggcgagtaagaattctcgcctcgcgagcac 12891700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 17252795 - 17252868
Alignment:
Q  103 aacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||   ||||||||| | |||  | |||||||||| |||||||||||| |||||||||||||||||    
T  17252795 aacccagaacagcattagtttggaacttgtcttgtactcgccatggcgagtaagaattctcgcctcgcgagcac 17252868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 13321306 - 13321266
Alignment:
Q  136 gtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  13321306 gtactcgccatggcgagtaagaattctcgcctcgcgagcac 13321266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 15343345 - 15343417
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    ||||| |||||  ||||||||||| |||  | |||||||||| |||||| |||||| ||||||||||||||||    
T  15343345 acccataacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccctcgcctcgcgagcac 15343417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 15349988 - 15350060
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||  | |||||||||| |||||| |||||| ||| ||||||||||||    
T  15349988 acccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccctcacctcgcgagcac 15350060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 15397674 - 15397714
Alignment:
Q  136 gtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  15397674 gtactcgccatggcgagcaagaactctcgcctcgcgagcac 15397714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 15404265 - 15404305
Alignment:
Q  136 gtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  15404265 gtactcgccatggcgagcaagaactctcgcctcgcgagcac 15404305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 839614 - 839540
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    ||||| |||||||  |||||| ||||||||| | | |||||||| ||||||||   |||||||||||||||||||    
T  839614 gaacctagaacaacattagttggggagttgacttgaactcgccatggcgagtagatactctcgcctcgcgagcac 839540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 16333509 - 16333467
Alignment:
Q  134 tggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||| |||||||| |||| ||||||||||||||||    
T  16333509 tggtactcgccatggcgagtaggaaccctcgcctcgcgagcac 16333467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 8720895 - 8720967
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||  | |||||||||| ||| || | |||| ||||||||||||||||    
T  8720895 acccagaacaactttagtttgggaattgtttagtactcgccatggcaagcaggaaccctcgcctcgcgagcac 8720967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 9072782 - 9072854
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||  | |||||||||| ||| || | |||| ||||||||||||||||    
T  9072782 acccagaacaactttagtttgggaattgtttagtactcgccatggcaagcaggaaccctcgcctcgcgagcac 9072854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 15337767 - 15337727
Alignment:
Q  136 gtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||| |||||| |||||||||||||||| ||||||    
T  15337767 gtactcgccatggcgagcaagaactctcgcctcgggagcac 15337727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 15361026 - 15360986
Alignment:
Q  136 gtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||| || ||| |||||||||||||||||||||||    
T  15361026 gtactcgccatggtgagcaagaactctcgcctcgcgagcac 15360986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 22643062 - 22643118
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgcc 144  Q
    ||||||||||||   ||||||||||||   ||||||||||||||||| |||||||||    
T  22643062 tgtaggatcagacttaacccagaacaacactagtttgggagttgagttgtactcgcc 22643118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 55023230 - 55023174
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgcc 144  Q
    ||||||||||||  |||||||||||||   |||||||| || |||||||||||||||    
T  55023230 tgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgcc 55023174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 5e-52; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 17706654 - 17706781
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  17706654 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagcacaaccaggatga 17706753  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  17706754 acttgtttatgtgtttatgcgatctgtg 17706781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 22062605 - 22062732
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  22062605 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 22062704  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  22062705 acttgtttatgtgtttatgcgatctgtg 22062732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 22265327 - 22265200
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  22265327 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 22265228  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  22265227 acttgtttatgtgtttatgcgatctgtg 22265200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 27663513 - 27663640
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  27663513 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 27663612  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  27663613 acttgtttatgtgtttatgcgatctgtg 27663640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 27670153 - 27670280
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  27670153 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 27670252  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  27670253 acttgtttatgtgtttatgcgatctgtg 27670280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 89 - 215
Target Start/End: Original strand, 41097947 - 41098073
Alignment:
Q  89 gtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaa 188  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||    
T  41097947 gtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaa 41098046  T
Q  189 cttgtttgtatgtttatgcgatctgtg 215  Q
    ||||||| | |||||||||||||||||    
T  41098047 cttgtttatgtgtttatgcgatctgtg 41098073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 89 - 215
Target Start/End: Complemental strand, 41769623 - 41769497
Alignment:
Q  89 gtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaa 188  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||    
T  41769623 gtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaa 41769524  T
Q  189 cttgtttgtatgtttatgcgatctgtg 215  Q
    ||||||| | |||||||||||||||||    
T  41769523 cttgtttatgtgtttatgcgatctgtg 41769497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 27609121 - 27608994
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  27609121 tgtaggatcagagggaacccagaacaaccttaatttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 27609022  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||||| ||||| |||||||||||    
T  27609021 acttgtttgtgtgtttgtgcgatctgtg 27608994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 89 - 215
Target Start/End: Complemental strand, 41776197 - 41776071
Alignment:
Q  89 gtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaa 188  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||    
T  41776197 gtaggatcagagggaacctagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaa 41776098  T
Q  189 cttgtttgtatgtttatgcgatctgtg 215  Q
    ||||||| | |||||||||||||||||    
T  41776097 cttgtttatgtgtttatgcgatctgtg 41776071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 90 - 215
Target Start/End: Original strand, 34294278 - 34294403
Alignment:
Q  90 taggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaac 189  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||| |||||||||||||||    
T  34294278 taggatcacagggaacccagaacaagcttagtttgggagttgagtggtactcgccgtggcgagtaagtactctcgcctcgcgagtacaaccaggatgaac 34294377  T
Q  190 ttgtttgtatgtttatgcgatctgtg 215  Q
    |||||| | |||||||||||||||||    
T  34294378 ttgtttatgtgtttatgcgatctgtg 34294403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 23584522 - 23584395
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| | ||    
T  23584522 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaaggactctcgcctcgcgagtacaaccagaacga 23584423  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | |||||| | ||||| |||||||||||    
T  23584422 aattgtttttgtgtttgtgcgatctgtg 23584395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 27615727 - 27615600
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||| | |||||||||||    
T  27615727 tgtaggatcagagggaacccagaacaaccttaatttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtaaaaccaggatga 27615628  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||||| ||||| |||||||||||    
T  27615627 acttgtttgtgtgtttgtgcgatctgtg 27615600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 24471971 - 24472098
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||| |||||||  |||||||||||| |||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  24471971 tgtaggatcagagggaacctagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 24472070  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  24472071 acttgtttatgtgtttatgcgatctgtg 24472098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 25107166 - 25107039
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  25107166 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 25107067  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  25107066 acttgattatgtgtttgtgcgatctgtg 25107039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 25166259 - 25166132
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  25166259 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 25166160  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  25166159 acttgattatgtgtttgtgcgatctgtg 25166132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 1692160 - 1692287
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    |||||||||||||||||||||||||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||     
T  1692160 tgtaggatcagagagaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 1692259  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| |||  ||||| |||||||||||    
T  1692260 acttgcttgagtgtttgtgcgatctgtg 1692287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 14994759 - 14994886
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||||||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||    
T  14994759 tgtaggatcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatga 14994858  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| |||  ||||| |||||||||||    
T  14994859 acttgcttgagtgtttgtgcgatctgtg 14994886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 16355227 - 16355100
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  16355227 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 16355128  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  16355127 acttgattatgtgtttgtgcgatctgtg 16355100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 16361886 - 16361759
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  16361886 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 16361787  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  16361786 acttgattatgtgtttgtgcgatctgtg 16361759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 19992265 - 19992138
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||     
T  19992265 tgtaggatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacagccaggatgc 19992166  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||| ||||  |||||||||||    
T  19992165 agttgcttgtgtgttggtgcgatctgtg 19992138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 23610284 - 23610157
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    |||||||||||||  |||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||     
T  23610284 tgtaggatcagaggaaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagcacaaccagaatgg 23610185  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | |||||| | ||||| |||||||||||    
T  23610184 aattgtttatgtgtttgtgcgatctgtg 23610157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 23841680 - 23841553
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    |||||||||||||  |||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||     
T  23841680 tgtaggatcagaggaaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagcacaaccagaatgg 23841581  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | |||||| | ||||| |||||||||||    
T  23841580 aattgtttatgtgtttgtgcgatctgtg 23841553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 34565220 - 34565093
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  34565220 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 34565121  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  34565120 acttgattatgtgtttgtgcgatctgtg 34565093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 34571875 - 34571748
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  34571875 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 34571776  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  34571775 acttgattatgtgtttgtgcgatctgtg 34571748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 15001402 - 15001529
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||||||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||    
T  15001402 tgtaggatcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatga 15001501  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| |||  | ||| |||||||||||    
T  15001502 acttgcttgagtatttgtgcgatctgtg 15001529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 27687052 - 27687179
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    |||||||||||||||||||||||||||  |||||||||||| |||||||||||||||| |||||| |||||||||||||||||||| |||||||| |||     
T  27687052 tgtaggatcagagagaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagcaagaactctcgcctcgcgagtacaaccagaatgt 27687151  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| |||  ||||| |||||||||||    
T  27687152 acttgcttgagtgtttgtgcgatctgtg 27687179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 40707503 - 40707409
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  40707503 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactctcgcctcgcgagtacaaccag 40707409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 40714145 - 40714051
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  40714145 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactctcgcctcgcgagtacaaccag 40714051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 88 - 213
Target Start/End: Original strand, 22334541 - 22334666
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||     
T  22334541 tgtaggatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagtaagaactatcgcctcgcgagcacagccaggatgc 22334640  T
Q  188 acttgtttgtatgtttatgcgatctg 213  Q
    | ||| | || ||||| |||||||||    
T  22334641 agttgctggtgtgtttgtgcgatctg 22334666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 18038391 - 18038518
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||| |||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||     
T  18038391 tgtaggatcagagggaacccaaaacaactttagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 18038490  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| |||  ||||| |||||||||||    
T  18038491 acttgcttgagtgtttgtgcgatctgtg 18038518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 88 - 213
Target Start/End: Original strand, 22327887 - 22328012
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||| |||||||| ||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||     
T  22327887 tgtaggatcagagggaacctagaacaagtttattttgggagttgagtggtactcgccatggcgagtaagaactttcgcctcgcgagcacagccaggatgc 22327986  T
Q  188 acttgtttgtatgtttatgcgatctg 213  Q
    | ||| | || ||||| |||||||||    
T  22327987 agttgctggtgtgtttgtgcgatctg 22328012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 25406807 - 25406680
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||  |||||||||||||   ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||     
T  25406807 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 25406708  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||||||||||    
T  25406707 agttgcttgagtgtttgtgcgatctgtg 25406680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 22133380 - 22133253
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    |||| |||||||  |||||||||||||   ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||     
T  22133380 tgtatgatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 22133281  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||||||||||    
T  22133280 agttgcttgagtgtttgtgcgatctgtg 22133253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 22140072 - 22139945
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    |||| |||||||  |||||||||||||   ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||     
T  22140072 tgtatgatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 22139973  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||||||||||    
T  22139972 agttgcttgagtgtttgtgcgatctgtg 22139945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 41294158 - 41294249
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaac 179  Q
    ||||||||||||  |||||||||||||   |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41294158 tgtaggatcagattgaacccagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaac 41294249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 22588476 - 22588349
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||  |||| ||||||||   ||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||     
T  22588476 tgtaggatcagattgaactcagaacaacactagtttgggagatgagtggtactcgccaaggcgagtaagaactctcgcctcgcaagcacaaccagaatgt 22588377  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||||||||||    
T  22588376 agttgcttgagtgtttgtgcgatctgtg 22588349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 37286504 - 37286631
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||  ||||| |||||||   ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||     
T  37286504 tgtaggatcagattgaacctagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 37286603  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||||||||||    
T  37286604 agttgcttgagtgtttgtgcgatctgtg 37286631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 37293207 - 37293334
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||  ||||| |||||||   ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||     
T  37293207 tgtaggatcagattgaacctagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 37293306  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||||||||||    
T  37293307 agttgcttgagtgtttgtgcgatctgtg 37293334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 27517133 - 27517040
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||| |||||||||| |||||||||||||||| ||||||||    
T  27517133 tgtaggatcagaggaaacccagaacaagcttagtt-gggagttgagtggtgctcgccatggcgagtaaggactctcgcctcgcgagtacaaccag 27517040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 27523770 - 27523677
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||| ||||||| |||||||||| |||||||||||||||| ||||||||    
T  27523770 tgtaggatcagaggaaacccagaacaagcttagtt-gggagttgagtggtgctcgccatggcgagtaaggactctcgcctcgcgagtacaaccag 27523677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 88 - 181
Target Start/End: Complemental strand, 17284448 - 17284355
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaacca 181  Q
    ||||||||||||  |||||||||||||   |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17284448 tgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaacca 17284355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 29477678 - 29477769
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaac 179  Q
    ||||||||||||  ||||||| |||||   ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29477678 tgtaggatcagattgaacccataacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaac 29477769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 15236504 - 15236598
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  |||||||||||||   |||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  15236504 tgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacatccag 15236598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 29471083 - 29471174
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaac 179  Q
    ||||||||||||  ||||||| |||||   |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29471083 tgtaggatcagattgaacccataacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaac 29471174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 33726227 - 33726114
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtttgtatgt 201  Q
    |||||||||||||  | |||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| |||||||| ||| | ||| |||  ||     
T  33726227 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgg 33726128  T
Q  202 ttatgcgatctgtg 215  Q
    || |||||||||||    
T  33726127 ttgtgcgatctgtg 33726114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 175
Target Start/End: Complemental strand, 20776229 - 20776183
Alignment:
Q  129 ttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  20776229 ttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagca 20776183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 37544410 - 37544296
Alignment:
Q  102 gaacccagaacaagcttagtttgggagt-tgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtttgtatg 200  Q
    |||||||||||||  | ||||||||||  | |||| ||||||||| |||||||||| |||||||||||||||| |||||||| ||| | ||| |||  ||    
T  37544410 gaacccagaacaacatcagtttgggagaatcagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtg 37544311  T
Q  201 tttatgcgatctgtg 215  Q
    ||| |||||||||||    
T  37544310 tttgtgcgatctgtg 37544296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 21667544 - 21667617
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||| |||||  |||||| || | ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  21667544 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 21667617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 22410364 - 22410409
Alignment:
Q  130 tgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  22410364 tgagtggtactcgccatggcgagtaagaactctcgcctcgcgagca 22410409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 29316786 - 29316713
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||| |||||  |||||| || | ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  29316786 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 29316713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 176
Target Start/End: Original strand, 14359557 - 14359631
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    ||||| |||||||  || |||||| | |||| |||||||||||| |||||||| |||||||||||||||||||||    
T  14359557 gaacctagaacaacattggtttggaatttgactggtactcgccatggcgagtaggaactctcgcctcgcgagcac 14359631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 22258239 - 22258284
Alignment:
Q  130 tgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  22258239 tgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 22258284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 19768714 - 19768642
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||  | |||||||||| |||||| |||||| ||||||||||||||||    
T  19768714 acccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccctcgcctcgcgagcac 19768642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 19775310 - 19775238
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||  | |||||||||| |||||| |||||| ||||||||||||||||    
T  19775310 acccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccctcgcctcgcgagcac 19775238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 23250306 - 23250234
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||  | |||||||||| |||||| |||||| ||||||||||||||||    
T  23250306 acccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccctcgcctcgcgagcac 23250234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 25808226 - 25808298
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  || |||||||| |||  | |||||||||| |||||| |||||||||||||||||||||||    
T  25808226 acccagaacaacttttgtttgggaattgtttagtactcgccatggcgagcaagaactctcgcctcgcgagcac 25808298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 176
Target Start/End: Original strand, 22325664 - 22325738
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    ||||||||||||   ||||||||| | |||  | |||||||||| |||||||||||| |||||||||||||||||    
T  22325664 gaacccagaacagcattagtttggaacttgtcttgtactcgccatggcgagtaagaattctcgcctcgcgagcac 22325738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 176
Target Start/End: Original strand, 23337026 - 23337100
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    ||||||| |||||  ||||||||| | |||| |||||||||||| ||||||||   |||||||||||||||||||    
T  23337026 gaacccataacaactttagtttggaaattgaatggtactcgccatggcgagtagatactctcgcctcgcgagcac 23337100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 100; Significance: 1e-49; HSPs: 3)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 30909 - 30782
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  30909 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 30810  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  30809 acttgtttatgtgtttatgcgatctgtg 30782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 72622 - 72749
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  72622 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 72721  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  72722 acttgtttatgtgtttatgcgatctgtg 72749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 8441 - 8347
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  |||||||||||||  |||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  8441 tgtaggatcagattgaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcacgagcacaaccag 8347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 1e-49; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 17669294 - 17669421
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  17669294 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 17669393  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  17669394 acttgtttatgtgtttatgcgatctgtg 17669421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 17675946 - 17676073
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  17675946 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 17676045  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  17676046 acttgtttatgtgtttatgcgatctgtg 17676073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 5534163 - 5534290
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  5534163 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 5534262  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  5534263 acttgtttatgtgtttatgcgatctgtg 5534290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 21915294 - 21915421
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  21915294 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 21915393  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  21915394 acttgtttatgtgtttatgcgatctgtg 21915421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 8354487 - 8354614
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||     
T  8354487 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtattcgccacggcgagtaagaactctcgcctcgcgagcacagccaggatgt 8354586  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| ||||  |||| |||||||||||    
T  8354587 agttgcttgtgagtttgtgcgatctgtg 8354614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 88 - 211
Target Start/End: Original strand, 20019664 - 20019787
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||| |||||||||||||    
T  20019664 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgccttgcgagtacaaccaggatga 20019763  T
Q  188 acttgtttgtatgtttatgcgatc 211  Q
    |||||||||| ||||| |||||||    
T  20019764 acttgtttgtgtgtttgtgcgatc 20019787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 22084213 - 22084086
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  22084213 tgtaggatcagagggaacccagaacaaccttagtttgggagttgaggggtactcgccatggcgagtaagagctctcgcctcgcgagtacaaccaggatga 22084114  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  22084113 acttgattatgtgtttgtgcgatctgtg 22084086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 88 - 202
Target Start/End: Original strand, 20013588 - 20013702
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||| |||||||||||||    
T  20013588 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgccttgcgagtacaaccaggatga 20013687  T
Q  188 acttgtttgtatgtt 202  Q
    |||||||||| ||||    
T  20013688 acttgtttgtgtgtt 20013702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 28455141 - 28455014
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||||||||||| |||||| |||||||||||| ||||||| |||||||||| |||||||||||| ||| |||||||||||||    
T  28455141 tgtaggatcagagggaacccagaacaagctcagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgggagtacaaccaggatga 28455042  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  28455041 acttgcttatgtgtttgtgcgatctgtg 28455014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 19111608 - 19111514
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  19111608 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactctcgcctcgcgagtacaaccag 19111514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 19117899 - 19117805
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  19117899 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactctcgcctcgcgagtacaaccag 19117805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 22123109 - 22123236
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    |||| |||||||| |||||||||||||  |||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||| |||||||| |||     
T  22123109 tgtaagatcagagggaacccagaacaacattagtttgggagatgagtggtactctccatggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 22123208  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||||  ||||| |||||||||||    
T  22123209 acttgtttgagtgtttgtgcgatctgtg 22123236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 18855318 - 18855191
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||  |||||||||||||   |||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||     
T  18855318 tgtaggatcagattgaacccagaacaacactagtgtgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 18855219  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||||||||||    
T  18855218 agttgcttgagtgtttgtgcgatctgtg 18855191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 18865713 - 18865586
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||  |||||||||||||   ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||     
T  18865713 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 18865614  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||| ||||||    
T  18865613 agttgcttgagtgtttgtgcgttctgtg 18865586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 22115444 - 22115530
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagc 174  Q
    ||||||||||||| |||||||||||||  |||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||    
T  22115444 tgtaggatcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtgagaactctcgcctcgcgagc 22115530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 29123467 - 29123373
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  |||||||||||||   |||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29123467 tgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccag 29123373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 16882896 - 16883023
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||| ||||||  |||||||||||||   ||||||||||| |||| ||||||||||| |||||||||||||| ||||||||||||||||||||| |||     
T  16882896 tgtagaatcagattgaacccagaacaacactagtttgggagatgagcggtactcgccatggcgagtaagaactttcgcctcgcgagcacaaccagaatgt 16882995  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||||||||||    
T  16882996 agttgcttgagtgtttgtgcgatctgtg 16883023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 19496758 - 19496645
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtttgtatgt 201  Q
    |||||||||||||  | |||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| |||||||| ||| | ||| |||  |||    
T  19496758 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 19496659  T
Q  202 ttatgcgatctgtg 215  Q
    || |||||||||||    
T  19496658 ttgtgcgatctgtg 19496645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 18065699 - 18065626
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||| |||||  |||||| || | ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  18065699 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 18065626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 22048314 - 22048201
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtttgtatgt 201  Q
    |||||||||||||  | |||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| | |||||| | | | ||| |||  |||    
T  22048314 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtataaccagaaggtagttgcttgagtgt 22048215  T
Q  202 ttatgcgatctgtg 215  Q
    || |||||||||||    
T  22048214 ttgtgcgatctgtg 22048201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 176
Target Start/End: Complemental strand, 19905849 - 19905790
Alignment:
Q  117 ttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    ||||||||| | |||| |||||||||||| |||||||| |||||||||||||||||||||    
T  19905849 ttagtttggaaattgactggtactcgccatggcgagtaggaactctcgcctcgcgagcac 19905790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 174
Target Start/End: Original strand, 22124296 - 22124338
Alignment:
Q  132 agtggtactcgccacggcgagtaagaactctcgcctcgcgagc 174  Q
    |||||||||||||| ||||||| ||||||||||||||||||||    
T  22124296 agtggtactcgccatggcgagtgagaactctcgcctcgcgagc 22124338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 22122146 - 22122195
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggt 137  Q
    ||||||||||||| |||||||||||||  |||||||||||| ||||||||    
T  22122146 tgtaggatcagagggaacccagaacaacattagtttgggagatgagtggt 22122195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 26934915 - 26934988
Alignment:
Q  103 aacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||   ||||||||| | |||  | |||||||||| |||||||||||| |||||||||||||||||    
T  26934915 aacccagaacagcattagtttggaacttgtcttgtactcgccatggcgagtaagaattctcgcctcgcgagcac 26934988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 20023668 - 20023740
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||  | |||||||||| ||| || |||||| ||||||||||||||||    
T  20023668 acccagaacaactttagtttgggaattgtttagtactcgccatggcaagcaagaaccctcgcctcgcgagcac 20023740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 3216595 - 3216555
Alignment:
Q  136 gtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||| |||||||||||| ||||| |||||||||||    
T  3216595 gtactcgccatggcgagtaagaattctcgtctcgcgagcac 3216555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 1e-49; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 18164397 - 18164524
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  18164397 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 18164496  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  18164497 acttgtttatgtgtttatgcgatctgtg 18164524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 40523085 - 40523212
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  40523085 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 40523184  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  40523185 acttgtttatgtgtttatgcgatctgtg 40523212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 60400 - 60527
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  60400 tgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctctcgcctcgcgagtacaaccaggatga 60499  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||||| ||||| |||||||||||    
T  60500 acttgtttgtgtgtttgtgcgatctgtg 60527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 9510736 - 9510863
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  9510736 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 9510835  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
     ||||||| | |||||||||||||||||    
T  9510836 gcttgtttatgtgtttatgcgatctgtg 9510863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 88 - 211
Target Start/End: Complemental strand, 14337752 - 14337629
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  14337752 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 14337653  T
Q  188 acttgtttgtatgtttatgcgatc 211  Q
    |||||||||| ||||| |||||||    
T  14337652 acttgtttgtgtgtttgtgcgatc 14337629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 18176486 - 18176359
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  18176486 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacagccaggatgt 18176387  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| ||||  |||| |||||||||||    
T  18176386 agttgcttgtgagtttgtgcgatctgtg 18176359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 18183158 - 18183031
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  18183158 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacagccaggatgt 18183059  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| ||||  |||| |||||||||||    
T  18183058 agttgcttgtgagtttgtgcgatctgtg 18183031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 88 - 211
Target Start/End: Complemental strand, 14331168 - 14331045
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||||    
T  14331168 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaactaggatga 14331069  T
Q  188 acttgtttgtatgtttatgcgatc 211  Q
    |||||||||| ||||| |||||||    
T  14331068 acttgtttgtgtgtttgtgcgatc 14331045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 22064 - 21937
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  22064 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 21965  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  21964 acttgattatgtgtttgtgcgatctgtg 21937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 8201798 - 8201925
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  8201798 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 8201897  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  8201898 acttgattatgtgtttgtgcgatctgtg 8201925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 11366582 - 11366455
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    |||| |||||||| |||||||||||||| |||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  11366582 tgtaagatcagagggaacccagaacaagtttatgttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacagccaggatga 11366483  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | |||||| | ||||| |||||||||||    
T  11366482 agttgtttatgtgtttgtgcgatctgtg 11366455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 14655140 - 14655267
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| | ||||||||     
T  14655140 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccatggcgagtaaggactctcgcctcgcgagcatagccaggatgt 14655239  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||||||||||    
T  14655240 agttgcttgagtgtttgtgcgatctgtg 14655267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 88 - 192
Target Start/End: Complemental strand, 15022512 - 15022408
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  15022512 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagagctctcgcctcgcgagtacaaccaggatga 15022413  T
Q  188 acttg 192  Q
    |||||    
T  15022412 acttg 15022408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 15155893 - 15156020
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||||||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||     
T  15155893 tgtaggatcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 15155992  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| |||  ||||| |||||||||||    
T  15155993 acttgcttgagtgtttgtgcgatctgtg 15156020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 16407018 - 16407145
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||||||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||     
T  16407018 tgtaggatcagagggaacccagaacaacgttagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 16407117  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| |||  ||||| |||||||||||    
T  16407118 acttgcttgagtgtttgtgcgatctgtg 16407145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 13684844 - 13684717
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||| |||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||     
T  13684844 tgtaggatcagagggaacccataacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 13684745  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| |||  ||||| |||||||||||    
T  13684744 acttgcttgagtgtttgtgcgatctgtg 13684717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 13691459 - 13691332
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||| |||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||     
T  13691459 tgtaggatcagagggaacccataacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 13691360  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| |||  ||||| |||||||||||    
T  13691359 acttgcttgagtgtttgtgcgatctgtg 13691332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 15162544 - 15162671
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||| ||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||     
T  15162544 tgtaggatcagagggaacccaggacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 15162643  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| |||  ||||| |||||||||||    
T  15162644 acttgcttgagtgtttgtgcgatctgtg 15162671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 44786198 - 44786292
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  44786198 tgtaggaccagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactctcgcctcgcgagtacaaccag 44786292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 44792839 - 44792933
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  44792839 tgtaggaccagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactctcgcctcgcgagtacaaccag 44792933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 11232008 - 11232094
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagc 174  Q
    ||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  11232008 tgtaggatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagc 11232094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 11238695 - 11238781
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagc 174  Q
    ||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  11238695 tgtaggatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagc 11238781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 20702715 - 20702809
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  |||||||||||||   ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20702715 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccag 20702809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 32768056 - 32767962
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  |||||||||||||   ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32768056 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccag 32767962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 88 - 173
Target Start/End: Complemental strand, 1347889 - 1347804
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgag 173  Q
    ||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  1347889 tgtaggatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 1347804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 33489 - 33395
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  |||||||||||||   ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  33489 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacatccag 33395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 70489 - 70583
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  |||||||||||||   ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  70489 tgtaggatcagattgaacccagaacaatactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacatccag 70583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 166
Target Start/End: Original strand, 12703111 - 12703189
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcc 166  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  12703111 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcc 12703189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 49051732 - 49051658
Alignment:
Q  108 agaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  49051732 agaaaaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcacgagtacaaccag 49051658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 88 - 177
Target Start/End: Original strand, 12704382 - 12704471
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcaca 177  Q
    ||||||||||||  |||||||||||||   ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  12704382 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcaca 12704471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 74597 - 74692
Alignment:
Q  88 tgtaggatcagagagaaccc-agaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  |||||| |||||||   ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  74597 tgtaggatcagattgaaccccagaacaatactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacatccag 74692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 12703184 - 12703260
Alignment:
Q  139 ctcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtttgtatgtttatgcgatctgtg 215  Q
    ||||||| |||||||||| |||||||||||||||| |||||||||| || ||||||| | |||||||||||||||||    
T  12703184 ctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggaagagcttgtttatgtgtttatgcgatctgtg 12703260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 176
Target Start/End: Original strand, 4318283 - 4318357
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||||   |||||||||| |||| |||||||||||| |||||||| |||||||||||||||||||||    
T  4318283 gaacccagaacaacactagtttgggaattgactggtactcgccatggcgagtaggaactctcgcctcgcgagcac 4318357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 18531612 - 18531538
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||||  ||||||||  | |||| | |||||||||| ||||||||||||||||||||||||||||||    
T  18531612 gaacccagaacaacattagtttgaaacttgacttgtactcgccatggcgagtaagaactctcgcctcgcgagcac 18531538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 8706363 - 8706290
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||| |||||  |||||| || | ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  8706363 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 8706290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 8719779 - 8719706
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||| |||||  |||||| || | ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  8719779 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 8719706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 18585038 - 18585151
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtttgtatgt 201  Q
    ||||||| |||||  |||||| || | ||||||||||||||||| ||||||| |||||||||||||||||||||   |||| ||| | |||||||  ||     
T  18585038 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagttgtttgagtgg 18585137  T
Q  202 ttatgcgatctgtg 215  Q
    || |||||||||||    
T  18585138 ttgtgcgatctgtg 18585151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 14148937 - 14148863
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    ||||| |||||||  ||||||||| | |||| |||||||||||| |||||||| |||||| ||||||||||||||    
T  14148937 gaacctagaacaacattagtttggaaattgactggtactcgccatggcgagtaggaactcccgcctcgcgagcac 14148863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 18553297 - 18553343
Alignment:
Q  129 ttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  18553297 ttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 18553343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 10869787 - 10869742
Alignment:
Q  130 tgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  10869787 tgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 10869742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 10875867 - 10875822
Alignment:
Q  130 tgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  10875867 tgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 10875822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 9410310 - 9410239
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||| |||||  ||||||||||| |||  |||||||||||| |||||||||| | ||||||||||||||||    
T  9410310 acccaaaacaactttagtttgggaattgtttggtactcgccatggcgagtaaggattctcgcctcgcgagca 9410239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 6016910 - 6016983
Alignment:
Q  103 aacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||   ||||||||| | |||  | |||||||||| |||||||||||| |||||||||||||||||    
T  6016910 aacccagaacagcattagtttggaacttgtcttgtactcgccatggcgagtaagaattctcgcctcgcgagcac 6016983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 23519720 - 23519765
Alignment:
Q  130 tgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    |||||||||||||||| ||||||| || ||||||||||||||||||    
T  23519720 tgagtggtactcgccatggcgagtgaggactctcgcctcgcgagca 23519765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 13570227 - 13570187
Alignment:
Q  136 gtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  13570227 gtactcgccatggcgagcaagaactctcgcctcgcgagcac 13570187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 1e-49; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 6981041 - 6980914
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  6981041 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 6980942  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  6980941 acttgtttatgtgtttatgcgatctgtg 6980914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 18194248 - 18194375
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  18194248 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacagccaggatgt 18194347  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| ||||  |||| |||||||||||    
T  18194348 agttgcttgtgagtttgtgcgatctgtg 18194375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 20649517 - 20649644
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  20649517 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 20649616  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | |||||| | |||||||||||||||||    
T  20649617 atttgtttatgtgtttatgcgatctgtg 20649644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 90 - 215
Target Start/End: Complemental strand, 12763082 - 12762957
Alignment:
Q  90 taggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaac 189  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||| |||| |||||||||||||||    
T  12763082 taggatcagagggaacccagaacaagcttagtttgggagttgagaggtactcgccatggcgagtaagtactctcgcctcacgagtacaaccaggatgaac 12762983  T
Q  190 ttgtttgtatgtttatgcgatctgtg 215  Q
    |||||| | |||||||||||||||||    
T  12762982 ttgtttatgtgtttatgcgatctgtg 12762957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 2869859 - 2869986
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||| ||||    
T  2869859 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatga 2869958  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | ||||| |||||||||||    
T  2869959 acttgtttatgtgtttgtgcgatctgtg 2869986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 2876474 - 2876601
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||| ||||    
T  2876474 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatga 2876573  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | ||||| |||||||||||    
T  2876574 acttgtttatgtgtttgtgcgatctgtg 2876601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 4233222 - 4233349
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||| |||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||| ||||    
T  4233222 tgtaggatcagagggaacccagaacaaccttattttgggagttgagtggtactcgtcatggcgagtaagtactctcgcctcgcgagtacaaccagaatga 4233321  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||||| ||||| |||||||||||    
T  4233322 acttgtttgtgtgtttgtgcgatctgtg 4233349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 8229270 - 8229143
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  8229270 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggttctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 8229171  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  8229170 acttgattatgtgtttgtgcgatctgtg 8229143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 14059340 - 14059467
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||    
T  14059340 tgtaggatcagagggaacccagaacaagcttagtttggaagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatga 14059439  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
      |||||| | ||||| |||||||||||    
T  14059440 gattgtttatgtgtttgtgcgatctgtg 14059467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 18931459 - 18931332
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  18931459 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 18931360  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  18931359 acttgattatgtgtttgtgcgatctgtg 18931332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 29587403 - 29587530
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  29587403 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 29587502  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  29587503 acttgattatgtgtttgtgcgatctgtg 29587530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 29593544 - 29593671
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  29593544 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 29593643  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  29593644 acttgattatgtgtttgtgcgatctgtg 29593671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 20061032 - 20060905
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||| | |||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  20061032 tgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtgctcgccaaggcgagtaagagctctcgcctcgcgagtacaaccaggatga 20060933  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  20060932 acttgattatgtgtttgtgcgatctgtg 20060905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 27327780 - 27327907
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||     
T  27327780 tgtaggatcagagggaacccagaacaagattagtttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaatcagaatgt 27327879  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||||||||||    
T  27327880 agttgcttgagtgtttgtgcgatctgtg 27327907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 27388520 - 27388647
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||     
T  27388520 tgtaggatcagagggaacccagaacaagattagtttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaatcagaatgt 27388619  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||||||||||    
T  27388620 agttgcttgagtgtttgtgcgatctgtg 27388647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 30694745 - 30694618
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||     
T  30694745 tgtaggatcagagggaacccaaaacaagtttattttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacagccaggatgc 30694646  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||| ||||| |||||||||||    
T  30694645 agttgcttgtgtgtttgtgcgatctgtg 30694618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 30597600 - 30597473
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||  ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||  |||     
T  30597600 tgtaggatcagaaggaacccagaacaaccttggtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagcacaaccaatatgg 30597501  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | |||||| | ||||| |||||||||||    
T  30597500 aattgtttatgtgtttgtgcgatctgtg 30597473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 30637854 - 30637980
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||| | |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  30637854 tgtaggatcagagggaacccagaacaagcttagtt-gtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 30637952  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||  | | ||||| |||||||||||    
T  30637953 acttgagtatgtgtttgtgcgatctgtg 30637980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 1538668 - 1538762
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  |||||||||||||   |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1538668 tgtaggatcagattgaacccagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccag 1538762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 1544767 - 1544861
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  |||||||||||||   |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1544767 tgtaggatcagattgaacccagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccag 1544861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 8797559 - 8797446
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtttgtatgt 201  Q
    |||||||||||||  | |||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||  ||    
T  8797559 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaacttgtttgtgcgt 8797460  T
Q  202 ttatgcgatctgtg 215  Q
    || |||||||||||    
T  8797459 ttgtgcgatctgtg 8797446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 101 - 215
Target Start/End: Complemental strand, 17031240 - 17031126
Alignment:
Q  101 agaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtttgtatg 200  Q
    |||||||| |||||  ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||| | ||| |||  ||    
T  17031240 agaacccaaaacaacattagtttgggaattgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaacagaatgtagttgcttgagtg 17031141  T
Q  201 tttatgcgatctgtg 215  Q
    ||| |||||||||||    
T  17031140 tttgtgcgatctgtg 17031126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 88 - 174
Target Start/End: Complemental strand, 26130851 - 26130765
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagc 174  Q
    ||||||||||||| |||||||||||||  |||||||||||| |||||||||||||||| ||||||| |||||| ||| |||||||||    
T  26130851 tgtaggatcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtgagaactttcgtctcgcgagc 26130765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 27430021 - 27430134
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtttgtatgt 201  Q
    |||||||||||||  |||||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| |||||||| ||| | ||| |||  |||    
T  27430021 gaacccagaacaacattagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 27430120  T
Q  202 ttatgcgatctgtg 215  Q
    || |||||||||||    
T  27430121 ttgtgcgatctgtg 27430134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 20802124 - 20802044
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    |||||||||||||  |||||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| ||||||||    
T  20802124 gaacccagaacaacattagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccag 20802044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 34833021 - 34832949
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| ||| ||||||||||| | ||||||||||||||||||||||||||||||    
T  34833021 acccagaacaactttagtttgggaattgtgtggtactcgctatggcgagtaagaactctcgcctcgcgagcac 34832949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 16372227 - 16372153
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||||  ||||||||| | |||| |||||||||||| |||||||| |||||||||||||||||||||    
T  16372227 gaacccagaacaacattagtttggaaattgactggtactcgccatggcgagtaggaactctcgcctcgcgagcac 16372153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 27186078 - 27186005
Alignment:
Q  102 gaacccagaacaagcttagtttgggagtt-gagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    |||||||||||||  |||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  27186078 gaacccagaacaacattagtt-gggagtttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagca 27186005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 27207914 - 27207841
Alignment:
Q  102 gaacccagaacaagcttagtttgggagtt-gagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    |||||||||||||  |||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  27207914 gaacccagaacaacattagtt-gggagtttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagca 27207841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 27241314 - 27241387
Alignment:
Q  102 gaacccagaacaagcttagtttgggag-ttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    |||||||||||||  |||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  27241314 gaacccagaacaacattag-ttgggagtttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagca 27241387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 27263162 - 27263235
Alignment:
Q  102 gaacccagaacaagcttagtttgggag-ttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    |||||||||||||  |||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  27263162 gaacccagaacaacattag-ttgggagtttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagca 27263235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 28314940 - 28314867
Alignment:
Q  102 gaacccagaacaagcttagtttgggagtt-gagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    |||||||||||||  |||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  28314940 gaacccagaacaacattagtt-gggagtttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagca 28314867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 17037073 - 17037153
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    |||||||||||||  ||||||||||| || ||||||||| |||| | ||||| ||||||||||||||||||||||| ||||    
T  17037073 gaacccagaacaacattagtttgggaattaagtggtacttgccatgacgagtgagaactctcgcctcgcgagcacatccag 17037153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 25595092 - 25595164
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||   ||||||||||| ||||||||||||||||||||||||||||||    
T  25595092 acccagaacaactttagtttgggaattgttgggtactcgccatggcgagtaagaactctcgcctcgcgagcac 25595164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 28258192 - 28258272
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    |||||||||||||  | |||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| ||||||||    
T  28258192 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccag 28258272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 28264816 - 28264896
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    |||||||||||||  | |||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| ||||||||    
T  28264816 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccag 28264896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 28336941 - 28337021
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    |||||||||||||  | |||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| ||||||||    
T  28336941 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccag 28337021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 28343565 - 28343645
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    |||||||||||||  | |||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| ||||||||    
T  28343565 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccag 28343645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 22331808 - 22331734
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    ||||| |||||||  ||||||||| | |||| |||||||||||| |||||||| |||||||||||||||||||||    
T  22331808 gaacctagaacaacgttagtttggaaattgactggtactcgccatggcgagtaggaactctcgcctcgcgagcac 22331734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 32564980 - 32565053
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||| |||||  |||||| || | ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  32564980 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 32565053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 14098993 - 14098922
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    |||||||||||  ||||||||||| |||  |||||||||||| |||||||||| | ||||||||||||||||    
T  14098993 acccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaaggattctcgcctcgcgagca 14098922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 16551758 - 16551831
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||| |||||  |||||| || | |||||||| |||||||| ||||||| |||||||||||||||||||||    
T  16551758 gaacccaaaacaacattagttgggaatttgagtggcactcgccatggcgagtgagaactctcgcctcgcgagca 16551831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 16577195 - 16577122
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||| |||||  |||||| || | |||||||| |||||||| ||||||| |||||||||||||||||||||    
T  16577195 gaacccaaaacaacattagttgggaatttgagtggcactcgccatggcgagtgagaactctcgcctcgcgagca 16577122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 16618185 - 16618258
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||| |||||  |||||| || | |||||||| |||||||| ||||||| |||||||||||||||||||||    
T  16618185 gaacccaaaacaacattagttgggaatttgagtggcactcgccatggcgagtgagaactctcgcctcgcgagca 16618258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 16628314 - 16628387
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||| |||||  |||||| || | |||||||| |||||||| ||||||| |||||||||||||||||||||    
T  16628314 gaacccaaaacaacattagttgggaatttgagtggcactcgccatggcgagtgagaactctcgcctcgcgagca 16628387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 17016688 - 17016733
Alignment:
Q  130 tgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  17016688 tgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 17016733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 25111207 - 25111135
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||| |||||||  ||  |||||||||||| ||| ||||||||||||||||||||||||||    
T  25111207 acccagaacaactttaatttgggaaatgtttggtactcgccatggctagtaagaactctcgcctcgcgagcac 25111135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 25117810 - 25117738
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||| |||||||  ||  |||||||||||| ||| ||||||||||||||||||||||||||    
T  25117810 acccagaacaactttaatttgggaaatgtttggtactcgccatggctagtaagaactctcgcctcgcgagcac 25117738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 31316832 - 31316904
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||  | |||||||||| |||||| |||||| ||||||||||||||||    
T  31316832 acccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccctcgcctcgcgagcac 31316904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 3708222 - 3708293
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    |||||||||||  ||||||||||| |||  |||||||||||| |||||||||| | |||||||||| |||||    
T  3708222 acccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaaggattctcgcctcgtgagca 3708293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 182
Target Start/End: Complemental strand, 28287707 - 28287644
Alignment:
Q  119 agtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    |||| ||||| | |||| ||||||||| |||||||||| |||||||||||||||| ||||||||    
T  28287707 agttggggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccag 28287644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 19808895 - 19808821
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    ||||| |||||||  || |||||| | |||| |||||||||||| |||||||| ||||||||||||| |||||||    
T  19808895 gaacctagaacaacattggtttggaatttgactggtactcgccatggcgagtaggaactctcgcctcacgagcac 19808821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 176
Target Start/End: Original strand, 34369711 - 34369785
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||||  ||||||||  | |||| | |||||||||| |||||||| | |||||||||||||||||||    
T  34369711 gaacccagaacaacattagtttgtaatttgacttgtactcgccatggcgagtatgtactctcgcctcgcgagcac 34369785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 23277050 - 23277090
Alignment:
Q  136 gtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  23277050 gtactcgccatggcgagtaagaattctcgcctcgcgagcac 23277090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 24314819 - 24314891
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||  | |||||| ||| |||||| |||||| ||||||||||||||||    
T  24314819 acccagaacaactttagtttgggaattgtttagtactcaccatggcgagcaagaaccctcgcctcgcgagcac 24314891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 22759188 - 22759146
Alignment:
Q  134 tggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    ||||||| |||| |||||||| |||||||||||||||||||||    
T  22759188 tggtacttgccatggcgagtaggaactctcgcctcgcgagcac 22759146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 1e-49; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 19780014 - 19780141
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  19780014 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 19780113  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  19780114 acttgtttatgtgtttatgcgatctgtg 19780141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 90 - 215
Target Start/End: Original strand, 18024154 - 18024279
Alignment:
Q  90 taggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaac 189  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||| |||||||||||||||    
T  18024154 taggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgcgatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaac 18024253  T
Q  190 ttgtttgtatgtttatgcgatctgtg 215  Q
    |||||| | |||||||||||||||||    
T  18024254 ttgtttatgtgtttatgcgatctgtg 18024279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 88 - 211
Target Start/End: Original strand, 8048220 - 8048343
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  8048220 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 8048319  T
Q  188 acttgtttgtatgtttatgcgatc 211  Q
    |||||||||| ||||| |||||||    
T  8048320 acttgtttgtgtgtttgtgcgatc 8048343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 88 - 211
Target Start/End: Original strand, 8054833 - 8054956
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  8054833 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 8054932  T
Q  188 acttgtttgtatgtttatgcgatc 211  Q
    |||||||||| ||||| |||||||    
T  8054933 acttgtttgtgtgtttgtgcgatc 8054956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 12475401 - 12475274
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  12475401 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 12475302  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  12475301 acttgtttatgtgtttatgcgatctgtg 12475274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 12482031 - 12481904
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  12482031 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 12481932  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  12481931 acttgtttatgtgtttatgcgatctgtg 12481904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 17962049 - 17962176
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  17962049 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 17962148  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||| |||| | |||||||||||||||||    
T  17962149 actcgtttatgtgtttatgcgatctgtg 17962176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 14268182 - 14268309
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||     
T  14268182 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactttcgcctcgcgagcacagccaggatgt 14268281  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||||||||||    
T  14268282 agttgcttgagtgtttgtgcgatctgtg 14268309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 4772478 - 4772351
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  4772478 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 4772379  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||  | | ||||| |||||||||||    
T  4772378 acttggctatgtgtttgtgcgatctgtg 4772351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 8385216 - 8385089
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  8385216 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 8385117  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  8385116 acttgattatgtgtttgtgcgatctgtg 8385089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 8391871 - 8391744
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  8391871 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 8391772  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  8391771 acttgattatgtgtttgtgcgatctgtg 8391744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 14074212 - 14074085
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  14074212 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 14074113  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  14074112 acttgattatgtgtttgtgcgatctgtg 14074085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 15256990 - 15256863
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  15256990 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 15256891  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  15256890 acttgattatgtgtttgtgcgatctgtg 15256863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 17808795 - 17808668
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  17808795 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 17808696  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  17808695 acttgattatgtgtttgtgcgatctgtg 17808668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 22195001 - 22194874
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  22195001 tgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctctcgcctcgcgagtacaaccaggatga 22194902  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  22194901 acttgattttgtgtttgtgcgatctgtg 22194874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 23954529 - 23954402
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||   |||||||||||||| |||||||||||||    
T  23954529 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtacttgccatggcgagtaagttatctcgcctcgcgagtacaaccaggatga 23954430  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  23954429 acttgtttatgtgtttatgcgatctgtg 23954402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 23961191 - 23961064
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||   |||||||||||||| |||||||||||||    
T  23961191 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtacttgccatggcgagtaagttatctcgcctcgcgagtacaaccaggatga 23961092  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  23961091 acttgtttatgtgtttatgcgatctgtg 23961064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 36884459 - 36884586
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  36884459 tgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctctcgcctcgcgagtacaaccaggatga 36884558  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  36884559 acttgattatgtgtttgtgcgatctgtg 36884586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 15148837 - 15148710
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||| ||| | |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  15148837 tgtaggatcagagggaacccaaaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctctcgcctcgcgagtacaaccaggatga 15148738  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  15148737 acttgattatgtgtttgtgcgatctgtg 15148710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 15383218 - 15383345
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||| |||||||||    
T  15383218 tgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctctcgcctcgcgagtacagccaggatga 15383317  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  15383318 acttgattatgtgtttgtgcgatctgtg 15383345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 17089702 - 17089829
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||| |||| ||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  17089702 tgtaggatcagagggaacccagaacaagcttagtttgtgagtggagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 17089801  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  17089802 acttgattatgtgtttgtgcgatctgtg 17089829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 29040623 - 29040750
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  29040623 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 29040722  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  29040723 acttgattatgtgtttgtgcgatctgtg 29040750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 14298552 - 14298679
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    |||| |||||||| |||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||     
T  14298552 tgtaagatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacagccaggatgc 14298651  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||| ||||  |||||||||||    
T  14298652 agttgcttgtgtgttggtgcgatctgtg 14298679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 15321818 - 15321945
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||  |||||||||||||   |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||     
T  15321818 tgtaggatcagattgaacccagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 15321917  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  |||||||||||||||||    
T  15321918 aattgcttgagtgtttatgcgatctgtg 15321945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 15362514 - 15362387
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||| ||||| | |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  15362514 tgtaggatcagagggaaccgagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctctcgcctcgcgagtacaaccaggatga 15362415  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | || || |||||||||||    
T  15362414 acttgattatgtgcttgtgcgatctgtg 15362387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 16231566 - 16231693
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| | | |||||||||    
T  16231566 tgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctctcgcctcgcgagtatagccaggatga 16231665  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  16231666 acttgattatgtgtttgtgcgatctgtg 16231693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 20115524 - 20115397
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||||||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||     
T  20115524 tgtaggatcagagggaacccagaacaactttagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 20115425  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| |||  ||||| |||||||||||    
T  20115424 acttgcttgagtgtttgtgcgatctgtg 20115397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 18296007 - 18295913
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  18296007 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactctcgcctcgcgagtacaaccag 18295913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 14305176 - 14305303
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    |||| |||||||| |||||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||     
T  14305176 tgtaagatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcaagtaagaactctcgcctcgcgagcacagccaggatgc 14305275  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||| ||||  |||||| ||||    
T  14305276 agttgcttgtgtgttggtgcgatatgtg 14305303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 51493542 - 51493669
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||  |||||||||||||   ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||     
T  51493542 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 51493641  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||||||||||    
T  51493642 agttgcttgagtgtttgtgcgatctgtg 51493669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 6873100 - 6873227
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||  |||||||||||||   ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||     
T  6873100 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 6873199  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||| ||||||    
T  6873200 agttgcttgagtgtttgtgcgttctgtg 6873227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 7900895 - 7901022
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||  |||||||||||||   ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||     
T  7900895 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 7900994  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||||||||||    
T  7900995 agttgcttgagtgtttgtgcgatctgtg 7901022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 26284632 - 26284726
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  |||||||||||||   ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26284632 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccag 26284726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 40478529 - 40478435
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  |||||||||||||   ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40478529 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccag 40478435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 17810654 - 17810560
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  |||||||||||||   ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  17810654 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacatccag 17810560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 40471856 - 40471762
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  ||||| |||||||   ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40471856 tgtaggatcagattgaacctagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccag 40471762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 14757146 - 14757240
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  |||||||||||||   ||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||| ||||    
T  14757146 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgccttgcgagcacatccag 14757240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 18071536 - 18071423
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtttgtatgt 201  Q
    |||||||||||||  |||||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| |||||||| ||| | ||| |||  |||    
T  18071536 gaacccagaacaacattagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 18071437  T
Q  202 ttatgcgatctgtg 215  Q
    || |||||||||||    
T  18071436 ttgtgcgatctgtg 18071423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 102 - 173
Target Start/End: Original strand, 9271842 - 9271913
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgag 173  Q
    |||||||||||||  ||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||    
T  9271842 gaacccagaacaactttagtttgggatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgag 9271913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 12349312 - 12349385
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||| |||||  |||||| || | ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  12349312 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 12349385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 55795825 - 55795752
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||| |||||  |||||| || | ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  55795825 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 55795752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 16956390 - 16956462
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||  | |||||||||| |||||| |||||||||||||||||||||||    
T  16956390 acccagaacaactttagtttgggaattgtttcgtactcgccatggcgagcaagaactctcgcctcgcgagcac 16956462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 30234918 - 30234990
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||  |||||||||||| ||||||||||||  ||||||||||||||||    
T  30234918 acccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaagaatcctcgcctcgcgagcac 30234990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 35170996 - 35170922
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    ||||| |||||||  ||||||||| | |||| |||||||||||| |||||||| ||||||||| |||||||||||    
T  35170996 gaacctagaacaacattagtttggaaattgactggtactcgccatggcgagtaggaactctcgtctcgcgagcac 35170922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 12299664 - 12299709
Alignment:
Q  130 tgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  12299664 tgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 12299709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 53433744 - 53433671
Alignment:
Q  103 aacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||   ||||||||| | |||  | |||||||||| |||||||||||| |||||||||||||||||    
T  53433744 aacccagaacagcattagtttggaacttgtcttgtactcgccatggcgagtaagaattctcgcctcgcgagcac 53433671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 386078 - 386134
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgcc 144  Q
    ||||||||||||  |||||||||||||   ||||||||||| |||||||||||||||    
T  386078 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgcc 386134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 19941894 - 19941966
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||| | |||  | |||||||||| |||||| |||||| ||||||||||||||||    
T  19941894 acccagaacaactttagtttggaaattgtttagtactcgccatggcgagcaagaaccctcgcctcgcgagcac 19941966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 23081954 - 23081882
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    ||||| |||||  ||||||||||| |||  | |||||||||| |||||| |||||| ||||||||||||||||    
T  23081954 acccaaaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccctcgcctcgcgagcac 23081882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 27710111 - 27710039
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    ||||| |||||  ||||||||||| |||  | |||||||||| |||||| |||||| ||||||||||||||||    
T  27710111 acccataacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccctcgcctcgcgagcac 27710039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 125
Target Start/End: Original strand, 17991393 - 17991430
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgg 125  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  17991393 tgtaggatcagagggaacccagaacaaccttagtttgg 17991430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 1e-49; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 22320710 - 22320837
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  22320710 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 22320809  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  22320810 acttgtttatgtgtttatgcgatctgtg 22320837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 22326863 - 22326990
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  22326863 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 22326962  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  22326963 acttgtttatgtgtttatgcgatctgtg 22326990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 26877292 - 26877419
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  26877292 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 26877391  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  26877392 acttgtttatgtgtttatgcgatctgtg 26877419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 29233911 - 29233784
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  29233911 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacgacgagtaagaactctcgcctcgcgagcacaaccaggatgt 29233812  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| ||||  |||| |||||||||||    
T  29233811 agttgcttgtgagtttgtgcgatctgtg 29233784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 29347210 - 29347083
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  29347210 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacgacgagtaagaactctcgcctcgcgagcacaaccaggatgt 29347111  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| ||||  |||| |||||||||||    
T  29347110 agttgcttgtgagtttgtgcgatctgtg 29347083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 90 - 211
Target Start/End: Original strand, 19489650 - 19489771
Alignment:
Q  90 taggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaac 189  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||    
T  19489650 taggatcagagggaacccataacaagcttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaac 19489749  T
Q  190 ttgtttgtatgtttatgcgatc 211  Q
    |||||| | ||||| |||||||    
T  19489750 ttgtttatgtgtttttgcgatc 19489771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 13306313 - 13306440
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  13306313 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 13306412  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  13306413 acttgattatgtgtttgtgcgatctgtg 13306440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 16986326 - 16986199
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  16986326 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 16986227  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  16986226 acttgattatgtgtttgtgcgatctgtg 16986199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 27216448 - 27216321
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  27216448 tgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 27216349  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  27216348 acttgattatgtgtttgtgcgatctgtg 27216321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 28431636 - 28431763
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  28431636 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 28431735  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  28431736 acttgattatgtgtttgtgcgatctgtg 28431763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 27617678 - 27617584
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27617678 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagtacaaccag 27617584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 9340665 - 9340538
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  9340665 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 9340566  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  9340565 acttgattatgtgtttgtgcgatctgtg 9340538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 9489299 - 9489172
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  9489299 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 9489200  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  9489199 acttgattatgtgtttgtgcgatctgtg 9489172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 9608560 - 9608433
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  9608560 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 9608461  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  9608460 acttgattatgtgtttgtgcgatctgtg 9608433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 24913688 - 24913815
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||||||||   |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||    
T  24913688 tgtaggatcagagggaacccagaacaacactagtttgggagttgagtggtactcgccgtggcgagtaagaactctcgcctcgcgagcacaaccagaatga 24913787  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||| ||||| |||||||||||    
T  24913788 agttgcttgtgtgtttgtgcgatctgtg 24913815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 27599646 - 27599519
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    |||| |||||||| |||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||     
T  27599646 tgtaagatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacagccaggatgc 27599547  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||| ||||| |||||||||||    
T  27599546 agttgcttgtgtgtttgtgcgatctgtg 27599519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 95 - 215
Target Start/End: Complemental strand, 16922907 - 16922787
Alignment:
Q  95 tcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtt 194  Q
    |||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||||||| |    
T  16922907 tcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaacttgat 16922808  T
Q  195 tgtatgtttatgcgatctgtg 215  Q
    | | ||||| |||||||||||    
T  16922807 tatgtgtttgtgcgatctgtg 16922787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 23171420 - 23171293
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||||||||   || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||     
T  23171420 tgtaggatcagagggaacccagaacaacactaatttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 23171321  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||||||||||    
T  23171320 agttgcttgagtgtttgtgcgatctgtg 23171293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 23582677 - 23582550
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||||||||   || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||     
T  23582677 tgtaggatcagagggaacccagaacaacactaatttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 23582578  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||||||||||    
T  23582577 agttgcttgagtgtttgtgcgatctgtg 23582550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 16997432 - 16997338
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  16997432 tgtaggaccagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactctcgcctcgcgagtacaaccag 16997338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 17004065 - 17003971
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  17004065 tgtaggaccagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactctcgcctcgcgagtacaaccag 17003971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 1843465 - 1843338
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    |||| |||||||| ||||| |||||||| ||| ||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||     
T  1843465 tgtaagatcagagggaacctagaacaagtttattttgggagttgagtggtactcgccatggcgagtgagaactctcgcttcgcgagcacaaccaggatgc 1843366  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||| ||||  |||||||||||    
T  1843365 agttgcttgtgtgttggtgcgatctgtg 1843338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 12829452 - 12829325
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||  |||||||||||||   ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||     
T  12829452 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 12829353  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||||||||||    
T  12829352 agttgcttgagtgtttgtgcgatctgtg 12829325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 16928730 - 16928644
Alignment:
Q  96 cagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  16928730 cagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactctcgcctcgcgagtacaaccag 16928644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 10101369 - 10101463
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  |||||||||||||   ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  10101369 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacatccag 10101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 37318641 - 37318569
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||  |||||||||||| ||||||||||||||||||||||||||||||    
T  37318641 acccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaagaactctcgcctcgcgagcac 37318569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 10866740 - 10866660
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    |||||||||||||  | |||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| ||||||||    
T  10866740 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccag 10866660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 10873907 - 10873827
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    |||||||||||||  | |||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| ||||||||    
T  10873907 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccag 10873827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 27369670 - 27369597
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||| |||||  |||||| || | ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  27369670 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 27369597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 27376180 - 27376107
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||| |||||  |||||| || | ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  27376180 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 27376107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 175
Target Start/End: Original strand, 24872146 - 24872218
Alignment:
Q  103 aacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||||||||  ||||||||| | |||  | |||||||||| |||||||||||||||||||||||||||||    
T  24872146 aacccagaacaacattagtttggaacttgtcttgtactcgccatggcgagtaagaactctcgcctcgcgagca 24872218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 175
Target Start/End: Original strand, 24880031 - 24880103
Alignment:
Q  103 aacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||||||||  ||||||||| | |||  | |||||||||| |||||||||||||||||||||||||||||    
T  24880031 aacccagaacaacattagtttggaacttgtcttgtactcgccatggcgagtaagaactctcgcctcgcgagca 24880103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 41604471 - 41604543
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||  | |||||||||| |||||| |||||||||||||||||||||||    
T  41604471 acccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaactctcgcctcgcgagcac 41604543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 41610368 - 41610440
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||  | |||||||||| |||||| |||||||||||||||||||||||    
T  41610368 acccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaactctcgcctcgcgagcac 41610440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 176
Target Start/End: Complemental strand, 27197238 - 27197179
Alignment:
Q  117 ttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    ||||||||| | |||| |||||||||||| |||||||| |||||||||||||||||||||    
T  27197238 ttagtttggaaattgactggtactcgccatggcgagtaggaactctcgcctcgcgagcac 27197179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 44380959 - 44381004
Alignment:
Q  130 tgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  44380959 tgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 44381004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 44387629 - 44387674
Alignment:
Q  130 tgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  44387629 tgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 44387674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 13970109 - 13970181
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||  | |||||||||| |||||| |||||| ||||||||||||||||    
T  13970109 acccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccctcgcctcgcgagcac 13970181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 24715078 - 24715006
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||  | |||||||||| |||||| |||||| ||||||||||||||||    
T  24715078 acccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccctcgcctcgcgagcac 24715006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 45057165 - 45057237
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||  | |||||||||| |||||| |||||| ||||||||||||||||    
T  45057165 acccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccctcgcctcgcgagcac 45057237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 24640730 - 24640772
Alignment:
Q  134 tggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||| |||||||| |||||||||||||||||||||    
T  24640730 tggtactcgccatggcgagtaggaactctcgcctcgcgagcac 24640772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 19645716 - 19645789
Alignment:
Q  103 aacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||   ||||||||| | |||  | |||||||||| |||||||||||| |||||||||||||||||    
T  19645716 aacccagaacagtattagtttggaacttgtcttgtactcgccatggcgagtaagaattctcgcctcgcgagcac 19645789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 30970718 - 30970791
Alignment:
Q  103 aacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||   ||||||||| | |||  | |||||||||| |||||||||||| |||||||||||||||||    
T  30970718 aacccagaacagcattagtttggaacttgtcttgtactcgccatggcgagtaagaattctcgcctcgcgagcac 30970791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 21139043 - 21139083
Alignment:
Q  136 gtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  21139043 gtactcgccatggcgagtaagaattctcgcctcgcgagcac 21139083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 21147061 - 21147101
Alignment:
Q  136 gtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  21147061 gtactcgccatggcgagtaagaattctcgcctcgcgagcac 21147101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 9540 - 9667
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||| |||||||||||||    
T  9540 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcacctcgcgagtacaaccaggatga 9639  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  9640 acttgtttatgtgtttatgcgatctgtg 9667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 96; Significance: 3e-47; HSPs: 3)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 10741 - 10614
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  10741 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 10642  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||||| ||||| |||||||||||    
T  10641 acttgtttgtgtgtttgtgcgatctgtg 10614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 57163 - 57036
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  57163 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 57064  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||||| ||||| |||||||||||    
T  57063 acttgtttgtgtgtttgtgcgatctgtg 57036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 776 - 903
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| |||||||||||||   |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  776 tgtaggatcagagggaacccagaacaacactagtttgggagttgagtggtactcgccgtggcgagtaagaactctcgcctcgcgagcacaaccaggatga 875  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||||||||||    
T  876 agttgcttgagtgtttgtgcgatctgtg 903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 3e-47; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 20215652 - 20215779
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  20215652 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 20215751  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  20215752 acttgtttatgtgtttatgcgatctgtg 20215779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 46157044 - 46157171
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  46157044 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 46157143  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  46157144 acttgattatgtgtttgtgcgatctgtg 46157171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 43078822 - 43078695
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  43078822 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 43078723  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  43078722 acttgattatgtgtttgtgcgatctgtg 43078695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 18599829 - 18599956
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||| |||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||     
T  18599829 tgtaggatcagagggaacccataacaactttagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 18599928  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| ||| |||||| |||||||||||    
T  18599929 acttgcttgaatgtttgtgcgatctgtg 18599956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 90 - 215
Target Start/End: Original strand, 44844608 - 44844734
Alignment:
Q  90 taggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaa-ccaggatgaa 188  Q
    ||||||||||| ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||||||    
T  44844608 taggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctctcgcctcgcgagtacaacccaggatgaa 44844707  T
Q  189 cttgtttgtatgtttatgcgatctgtg 215  Q
    |||| || | ||||| |||||||||||    
T  44844708 cttgattatgtgtttgtgcgatctgtg 44844734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 51328402 - 51328496
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||| ||||||||    
T  51328402 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcaagtaagaactctcgcctcgcgagtacaaccag 51328496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 51335036 - 51335130
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||| ||||||||    
T  51335036 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcaagtaagaactctcgcctcgcgagtacaaccag 51335130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 88 - 181
Target Start/End: Original strand, 41478300 - 41478393
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaacca 181  Q
    ||||||||||||| |||||||||||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  41478300 tgtaggatcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaacca 41478393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 21829096 - 21828969
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||  |||||||||||||   |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| || |||     
T  21829096 tgtaggatcagattgaacccagaacaacactagtttgggagttgagtggtactcgccttggcgagtaagaactctcgcctcgcgagcacaactagaatgt 21828997  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||||||||||    
T  21828996 agttgcttgagtgtttgtgcgatctgtg 21828969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 21844609 - 21844482
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||  |||||||||||||   ||||||||||| |||||||||||||||  || ||||||||||||||||||||||||||||||||| |||     
T  21844609 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccttggtgagtaagaactctcgcctcgcgagcacaaccagaatgt 21844510  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||||||||||    
T  21844509 agttgcttgagtgtttgtgcgatctgtg 21844482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 1011105 - 1011011
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  |||||||||||||   ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  1011105 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacatccag 1011011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 16345512 - 16345625
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtttgtatgt 201  Q
    |||||||||||||  | |||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| |||||||| ||| | ||| |||  |||    
T  16345512 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 16345611  T
Q  202 ttatgcgatctgtg 215  Q
    || |||||||||||    
T  16345612 ttgtgcgatctgtg 16345625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 16352160 - 16352273
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtttgtatgt 201  Q
    |||||||||||||  | |||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| |||||||| ||| | ||| |||  |||    
T  16352160 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 16352259  T
Q  202 ttatgcgatctgtg 215  Q
    || |||||||||||    
T  16352260 ttgtgcgatctgtg 16352273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 41356025 - 41356138
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtttgtatgt 201  Q
    |||||||||||||  | |||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| |||||||| ||| | ||| |||  |||    
T  41356025 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 41356124  T
Q  202 ttatgcgatctgtg 215  Q
    || |||||||||||    
T  41356125 ttgtgcgatctgtg 41356138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 41348588 - 41348701
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtttgtatgt 201  Q
    |||||||||||||  | |||||||||| | |||| ||||||||| |||||||||| ||||||||||| |||| |||||||| ||| | ||| |||  |||    
T  41348588 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcacgagtacaaccagaatgtagttgcttgagtgt 41348687  T
Q  202 ttatgcgatctgtg 215  Q
    || |||||||||||    
T  41348688 ttgtgcgatctgtg 41348701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 47659585 - 47659472
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtttgtatgt 201  Q
    |||||||||||||  | |||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| |||||||| | | | ||| |||  |||    
T  47659585 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaaggtagttgcttgagtgt 47659486  T
Q  202 ttatgcgatctgtg 215  Q
    || |||||||||||    
T  47659485 ttgtgcgatctgtg 47659472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 20524968 - 20525027
Alignment:
Q  117 ttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    ||||||||| |||||| |||||||||||| |||||||| |||||||||||||||||||||    
T  20524968 ttagtttggaagttgattggtactcgccatggcgagtaggaactctcgcctcgcgagcac 20525027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 19063888 - 19063814
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||||  |||||||||   |||| |||||||||||| |||||||| |||||||||||||||||||||    
T  19063888 gaacccagaacaacattagtttggatattgactggtactcgccatggcgagtaggaactctcgcctcgcgagcac 19063814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 19105121 - 19105047
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    ||||||| |||||  ||||||||| | |||| |||||||||||| |||||||| |||||||||||||||||||||    
T  19105121 gaacccataacaacattagtttggaaattgactggtactcgccatggcgagtaggaactctcgcctcgcgagcac 19105047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 19111778 - 19111704
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||||  |||||||||   |||| |||||||||||| |||||||| |||||||||||||||||||||    
T  19111778 gaacccagaacaacattagtttggatattgactggtactcgccatggcgagtaggaactctcgcctcgcgagcac 19111704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 27898397 - 27898470
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||| |||||  |||||| || | ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  27898397 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 27898470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 43063014 - 43063087
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||| |||||  |||||| || | ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  43063014 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 43063087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 44756473 - 44756400
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||| |||||  |||||| || | ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  44756473 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 44756400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 49334940 - 49334867
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||| |||||  |||||| || | ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  49334940 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 49334867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 18626041 - 18626086
Alignment:
Q  130 tgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  18626041 tgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 18626086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 21806940 - 21807012
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||  | |||||||||| |||||| |||||| ||||||||||||||||    
T  21806940 acccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccctcgcctcgcgagcac 21807012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 33385963 - 33386035
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||  | |||||||||| |||||| |||||| ||||||||||||||||    
T  33385963 acccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccctcgcctcgcgagcac 33386035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 33392607 - 33392679
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||  | |||||||||| |||||| |||||| ||||||||||||||||    
T  33392607 acccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccctcgcctcgcgagcac 33392679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 8305503 - 8305430
Alignment:
Q  103 aacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    ||||||||||||  ||||||||| | |||  | |||||||||| |||||||||||| ||| |||||||||||||    
T  8305503 aacccagaacaacattagtttggaacttgtctcgtactcgccatggcgagtaagaattcttgcctcgcgagcac 8305430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 33394215 - 33394102
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtttgtatgt 201  Q
    ||||||| |||||  |||||| || | || ||||| |||||||| ||||||| |||||||||||||||||||||   |||| ||| | |||||||  ||     
T  33394215 gaacccaaaacaacattagttgggaatttaagtggcactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagttgtttgagtgg 33394116  T
Q  202 ttatgcgatctgtg 215  Q
    || |||||||||||    
T  33394115 ttgtgcgatctgtg 33394102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 50887491 - 50887564
Alignment:
Q  103 aacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||   ||||||||| | |||  | |||||||||| |||||||||||| |||||||||||||||||    
T  50887491 aacccagaacagcattagtttggaacttgtcttgtactcgccatggcgagtaagaattctcgcctcgcgagcac 50887564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 21835700 - 21835660
Alignment:
Q  136 gtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||| |||||| |||||| ||||||||||||||||    
T  21835700 gtactcgccatggcgagcaagaaccctcgcctcgcgagcac 21835660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 88; Significance: 2e-42; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 67890 - 67763
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||| |||||||  |||||||||||| |||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  67890 tgtaggatcagagggaacctagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 67791  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    |||||||| | |||||||||||||||||    
T  67790 acttgtttatgtgtttatgcgatctgtg 67763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 57426 - 57299
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||| ||||||  |||||||||||||   |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||     
T  57426 tgtagaatcagattgaacccagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 57327  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||||||||||    
T  57326 agttgcttgagtgtttgtgcgatctgtg 57299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 41919 - 41792
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    |||||||||| |  |||||||||||||   |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||     
T  41919 tgtaggatcatattgaacccagaacaacactagtttgggatttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 41820  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||||||||||    
T  41819 agttgcttgagtgtttgtgcgatctgtg 41792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 7370 - 7298
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||    
T  7370 acccagaacaactttagtttgggaattgtttggtactcgccacggcgagtaagaactctcgcctcgcgagcac 7298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 39086 - 38959
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  39086 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 38987  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    ||||| || | ||||| |||||||||||    
T  38986 acttgattatgtgtttgtgcgatctgtg 38959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 109048 - 109175
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||| ||||    
T  109048 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagaactctcacctcgcgagtacaaccagaatga 109147  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
      |||||| | ||||| |||||||||||    
T  109148 gattgtttatgtgtttgtgcgatctgtg 109175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 91 - 215
Target Start/End: Original strand, 59187 - 59311
Alignment:
Q  91 aggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaact 190  Q
    |||||||||| ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||| ||||||||||||| ||    
T  59187 aggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagtgctctcgcctcacgagtacaaccaggatgagct 59286  T
Q  191 tgtttgtatgtttatgcgatctgtg 215  Q
    ||||| | ||||| |||||||||||    
T  59287 tgtttatgtgtttgtgcgatctgtg 59311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 91 - 215
Target Start/End: Complemental strand, 139446 - 139322
Alignment:
Q  91 aggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaact 190  Q
    |||||||||| ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||| ||||||||||||| ||    
T  139446 aggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagtgctctcgcctcacgagtacaaccaggatgagct 139347  T
Q  191 tgtttgtatgtttatgcgatctgtg 215  Q
    ||||| | ||||| |||||||||||    
T  139346 tgtttatgtgtttgtgcgatctgtg 139322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 27024 - 26897
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 187  Q
    ||||||||||||  ||||||| |||||   |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||     
T  27024 tgtaggatcagattgaacccaaaacaacactagtttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaacctgaatgt 26925  T
Q  188 acttgtttgtatgtttatgcgatctgtg 215  Q
    | ||| |||  ||||| |||||||||||    
T  26924 agttgcttgagtgtttgtgcgatctgtg 26897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 307478 - 307384
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  |||||||||||||   || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  307478 tgtaggatcagattgaacccagaacaacactaatttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccag 307384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 3600 - 3694
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  |||||||||||||   ||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  3600 tgtaggatcagattgaacccagaacaacactagttagggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacatccag 3694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 105634 - 105696
Alignment:
Q  120 gtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  105634 gtttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccag 105696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 125837 - 125931
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    ||||||||||||  ||||||||||||    | |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  125837 tgtaggatcagattgaacccagaacagcactggtttgggagttgagtggtactcgccatggcgagtaagaactttcgcctcgcgagcacaaccag 125931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 88 - 177
Target Start/End: Complemental strand, 12804 - 12715
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcaca 177  Q
    ||||||||||||  ||||| |||||||   ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  12804 tgtaggatcagattgaacctagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcaca 12715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 102 - 173
Target Start/End: Complemental strand, 3077 - 3006
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgag 173  Q
    |||||||||||||  ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  3077 gaacccagaacaacgttagtttgggaattgagtggtactcgccatggcgagtaagaactctcgcctcgcgag 3006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 57342 - 57229
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtttgtatgt 201  Q
    |||||||||||||  |||||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| |||||||| ||| | ||| |||  |||    
T  57342 gaacccagaacaacattagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 57243  T
Q  202 ttatgcgatctgtg 215  Q
    || |||||||||||    
T  57242 ttgtgcgatctgtg 57229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 12810 - 12738
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||  |||||||||||| ||||||||||||||||||||||||||||||    
T  12810 acccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaagaactctcgcctcgcgagcac 12738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 8601 - 8695
Alignment:
Q  88 tgtaggatcagagagaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    |||||||| |||  |||||||||||||  |||| |||| | |||| | |||||||||| |||||||||||||||||||||||||||||| |||||    
T  8601 tgtaggataagattgaacccagaacaacattaggttggaacttgacttgtactcgccatggcgagtaagaactctcgcctcgcgagcactaccag 8695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 3138 - 3068
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagc 174  Q
    ||||||||||| |||||||||||| |||  ||||||| |||| ||||||||||||||||||||||||||||    
T  3138 acccagaacaaccttagtttgggaattgtttggtacttgccatggcgagtaagaactctcgcctcgcgagc 3068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 32050 - 32123
Alignment:
Q  102 gaacccagaacaagcttagtttgggag-ttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||||||||| ||||| ||||||| |||||||||||| |||| |||||||||||||||||||||||||||||    
T  32050 gaacccagaacaaccttag-ttgggagattgagtggtacttgccatggcgagtaagaactctcgcctcgcgagca 32123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 38410 - 38297
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtttgtatgt 201  Q
    |||||||||||||  | |||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| |||||||| | | | ||| |||  |||    
T  38410 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaaggtagttgcttgagtgt 38311  T
Q  202 ttatgcgatctgtg 215  Q
    || |||||||||||    
T  38310 ttgtgcgatctgtg 38297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 76402 - 76515
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatgaacttgtttgtatgt 201  Q
    |||||||||||||  | |||||||||| | |||| ||||||||| |||||||||| |||||||||||||||| |||||||| | | | ||| |||  |||    
T  76402 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaaggtagttgcttgagtgt 76501  T
Q  202 ttatgcgatctgtg 215  Q
    || |||||||||||    
T  76502 ttgtgcgatctgtg 76515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 78580 - 78508
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  |||||||||||  ||  |||||||||||| ||||||||||||||||||||||||||||||    
T  78580 acccagaacaactttagtttgggaaatgtttggtactcgccatggcgagtaagaactctcgcctcgcgagcac 78508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 9157 - 9084
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||| |||||  |||||| || | ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  9157 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 9084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 3816 - 3889
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    ||||||| |||||  |||||| || | ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  3816 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 3889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 22544 - 22499
Alignment:
Q  130 tgagtggtactcgccacggcgagtaagaactctcgcctcgcgagca 175  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  22544 tgagtggtactcgccatggcgagtgagaactctcgcctcgcgagca 22499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 74362 - 74290
Alignment:
Q  104 acccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||  ||||||||||| |||  | |||||||||| |||||| |||||| ||||||||||||||||    
T  74362 acccagaacaactttagtttgggaattgtttagtactcgccatggcgagcaagaaccctcgcctcgcgagcac 74290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0560 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 5570 - 5616
Alignment:
Q  136 gtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccag 182  Q
    |||||||||| |||||||||||||||||||||| ||||||| |||||    
T  5570 gtactcgccatggcgagtaagaactctcgcctcacgagcactaccag 5616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 10545 - 10471
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||||  |||||| ||||||||  | | |||||||| ||||||||   |||||||||||||||||||    
T  10545 gaacccagaacaacattagttggggagttggcttgaactcgccatggcgagtagatactctcgcctcgcgagcac 10471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 176
Target Start/End: Original strand, 14278 - 14352
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||||  |||||| ||||||||  | | |||||||| ||||||||   |||||||||||||||||||    
T  14278 gaacccagaacaacattagttggggagttggcttgaactcgccatggcgagtagatactctcgcctcgcgagcac 14352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 37075 - 37001
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    ||||||||||||   |||| |||| | |||| | |||||||||  |||||||| |||||||||||||||||||||    
T  37075 gaacccagaacagcattagcttggaacttgacttgtactcgccttggcgagtaggaactctcgcctcgcgagcac 37001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 9708 - 9634
Alignment:
Q  102 gaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||||  |||||| ||||||||    |||||||||| ||||||||   |||||||||||||||||||    
T  9708 gaacccagaacaacattagttggggagttggcctgtactcgccatggcgagtagatactctcgcctcgcgagcac 9634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 481 - 408
Alignment:
Q  103 aacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcac 176  Q
    |||||||||||   ||||||||| | |||  | |||||||||| |||||||||||| ||||||||| |||||||    
T  481 aacccagaacatcattagtttggaacttgtcttgtactcgccatggcgagtaagaattctcgcctcacgagcac 408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University