View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1117_low_5 (Length: 362)
Name: NF1117_low_5
Description: NF1117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1117_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 99 - 265
Target Start/End: Original strand, 30633834 - 30634005
Alignment:
| Q |
99 |
agtctcaaccgttcatttactgtgttaactagctttcattctatgaaatttgtgatacatgtgcc-----ttaagaacaaatttttaaagtagagcaatg |
193 |
Q |
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| T |
30633834 |
agtctcaaccgttcatttactgtgttaactagctttcattctatgaaatttgtgatacatgtgccatgccttaagaacaaatttttaaagtagagcaatg |
30633933 |
T |
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| Q |
194 |
ctagcaacctactctttaggtgtatttggtaaaagcaaataatatttggaacccttgcaatattatttctca |
265 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30633934 |
ctagcaacctactctttaggtgtatttggtaaaagcaaataatatttggaacccttgcaatattatttctca |
30634005 |
T |
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