View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11180A_low_100 (Length: 273)
Name: NF11180A_low_100
Description: NF11180A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11180A_low_100 |
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Alignment Details
Target: chr6 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 25399946 - 25400191
Alignment:
| Q |
1 |
aaataataataaatatgataggtgtatagatgtaggaccatactccactgagaaaataaatgtaggaccatccaacaaacaactgtcatctcacaaagtc |
100 |
Q |
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|||||||||||| ||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25399946 |
aaataataataattattataggtgtatagatgtaggaccatcctccacgtcgaaaataaatgtaggaccatccaacaaacaactgtcatctcacaaagtc |
25400045 |
T |
|
| Q |
101 |
acaatatcaataataacttcacgtttacaaagtaaatgaagagtgaaaatttagaaaatgtatctaccccatgattaaatacatataaaatatggaaact |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
25400046 |
acaatatcaataataacttcacgtttacaaagtaaatgaagagtgaaaatttagaaaatgtatctaccccatgattaaatacatataaaatttggaaact |
25400145 |
T |
|
| Q |
201 |
atataaaatatgggaaaccaatcgtactttgacggtcacatttgaa |
246 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
25400146 |
atataaaatatgggaaaccaatcgtactttgtcggtcacatttgaa |
25400191 |
T |
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