View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11180A_low_138 (Length: 250)
Name: NF11180A_low_138
Description: NF11180A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11180A_low_138 |
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Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 14 - 230
Target Start/End: Original strand, 50386246 - 50386462
Alignment:
| Q |
14 |
gaataacaatgcctctaaaaacctattcaccaacaaatgcaactatttcaatctcacctcactcatcatatttctccatccaccaactagtttcccaaca |
113 |
Q |
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| T |
50386246 |
gaataacaatgcctctaaaaacctattcaccaacaaatgcaactatttcaatttcacctcactcatcatatttctccatccaccaactagtttcccaaca |
50386345 |
T |
|
| Q |
114 |
aaccacatttctaagaaggatgtcaaaattgacaagataagtatagaccaagcaatttccttctacacaagaatcttgaaaaccaaagagttgtatccat |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50386346 |
aaccacatttctaagaaggatgtcaaaattgacaagataagtatagaccaagcaatttccttctacacaagaatcttgaaaaccaaagagttgtatccat |
50386445 |
T |
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| Q |
214 |
tagatatggacattatt |
230 |
Q |
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||||||||||||||||| |
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| T |
50386446 |
tagatatggacattatt |
50386462 |
T |
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