View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11180A_low_183 (Length: 233)

Name: NF11180A_low_183
Description: NF11180A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11180A_low_183
NF11180A_low_183
[»] chr3 (60 HSPs)
chr3 (99-227)||(10305483-10305615)
chr3 (99-213)||(51005318-51005436)
chr3 (117-214)||(4251260-4251358)
chr3 (1-97)||(39043822-39043918)
chr3 (1-97)||(10366714-10366812)
chr3 (36-101)||(29024026-29024091)
chr3 (1-98)||(19822964-19823062)
chr3 (1-98)||(37695730-37695830)
chr3 (28-97)||(12904845-12904914)
chr3 (28-98)||(8679118-8679188)
chr3 (28-98)||(23004446-23004516)
chr3 (5-98)||(23068155-23068249)
chr3 (33-99)||(36460479-36460545)
chr3 (5-98)||(43253927-43254023)
chr3 (1-97)||(30711026-30711123)
chr3 (5-94)||(37497447-37497539)
chr3 (4-99)||(3901212-3901309)
chr3 (19-97)||(11632053-11632131)
chr3 (1-98)||(11905775-11905873)
chr3 (36-98)||(17652741-17652803)
chr3 (29-98)||(3313236-3313305)
chr3 (29-98)||(12736636-12736705)
chr3 (5-98)||(44301517-44301613)
chr3 (21-98)||(51838023-51838100)
chr3 (1-98)||(36476536-36476635)
chr3 (28-91)||(1778624-1778687)
chr3 (5-99)||(27471291-27471387)
chr3 (23-98)||(34750472-34750547)
chr3 (38-97)||(41351629-41351688)
chr3 (48-98)||(24569164-24569214)
chr3 (36-98)||(30190724-30190786)
chr3 (36-98)||(37311939-37312001)
chr3 (1-98)||(52290846-52290944)
chr3 (1-94)||(40462273-40462366)
chr3 (37-97)||(28690847-28690907)
chr3 (28-72)||(31158601-31158645)
chr3 (1-98)||(38795296-38795395)
chr3 (18-100)||(30682128-30682211)
chr3 (33-99)||(33491422-33491489)
chr3 (5-98)||(37773028-37773125)
chr3 (46-97)||(45710849-45710900)
chr3 (36-98)||(5323001-5323063)
chr3 (25-99)||(38137509-38137583)
chr3 (21-99)||(40194477-40194555)
chr3 (1-98)||(53560168-53560268)
chr3 (5-93)||(25108594-25108683)
chr3 (58-95)||(37804796-37804833)
chr3 (46-99)||(38705174-38705227)
chr3 (46-99)||(41038456-41038509)
chr3 (25-85)||(14194534-14194594)
chr3 (46-98)||(19611908-19611960)
chr3 (46-98)||(34957502-34957554)
chr3 (1-97)||(54726437-54726535)
chr3 (15-72)||(45811590-45811648)
chr3 (53-99)||(48541063-48541109)
chr3 (39-97)||(26467101-26467161)
chr3 (33-77)||(24703648-24703692)
chr3 (46-98)||(36463010-36463062)
chr3 (34-98)||(49447855-49447919)
chr3 (57-97)||(54477524-54477564)
[»] chr5 (39 HSPs)
chr5 (114-228)||(4246090-4246204)
chr5 (1-98)||(6315839-6315938)
chr5 (1-98)||(1248666-1248765)
chr5 (1-98)||(19929898-19929997)
chr5 (1-99)||(21060583-21060682)
chr5 (25-98)||(8725071-8725144)
chr5 (1-98)||(6753720-6753819)
chr5 (21-98)||(8698283-8698360)
chr5 (28-97)||(29374323-29374392)
chr5 (33-98)||(31655039-31655104)
chr5 (14-97)||(4440986-4441071)
chr5 (5-99)||(6753985-6754081)
chr5 (5-97)||(29570347-29570442)
chr5 (21-98)||(40530286-40530363)
chr5 (25-98)||(40899896-40899969)
chr5 (5-97)||(41496036-41496130)
chr5 (28-98)||(7827988-7828058)
chr5 (33-98)||(4818537-4818602)
chr5 (25-88)||(9515714-9515777)
chr5 (36-99)||(27542784-27542847)
chr5 (32-98)||(22848446-22848512)
chr5 (36-98)||(27580589-27580651)
chr5 (1-72)||(41480101-41480176)
chr5 (21-98)||(6615942-6616018)
chr5 (1-77)||(32439823-32439902)
chr5 (1-98)||(3348192-3348291)
chr5 (18-97)||(11796230-11796308)
chr5 (34-84)||(2232145-2232195)
chr5 (46-96)||(26285542-26285592)
chr5 (1-98)||(41062222-41062320)
chr5 (19-87)||(39325834-39325903)
chr5 (1-72)||(41478735-41478810)
chr5 (36-97)||(42803683-42803744)
chr5 (45-92)||(843286-843333)
chr5 (46-97)||(18841478-18841529)
chr5 (56-99)||(29856056-29856099)
chr5 (5-89)||(30512757-30512843)
chr5 (5-89)||(30553097-30553183)
chr5 (33-97)||(15818545-15818609)
[»] chr2 (44 HSPs)
chr2 (115-228)||(13761554-13761667)
chr2 (1-99)||(36354504-36354603)
chr2 (28-98)||(5789710-5789780)
chr2 (1-97)||(35242360-35242458)
chr2 (5-98)||(8947114-8947208)
chr2 (28-98)||(34225571-34225641)
chr2 (36-99)||(19937374-19937437)
chr2 (1-98)||(9458328-9458426)
chr2 (25-99)||(39691468-39691542)
chr2 (1-95)||(5272204-5272299)
chr2 (1-98)||(14523434-14523533)
chr2 (1-99)||(17695280-17695382)
chr2 (1-96)||(38187947-38188043)
chr2 (1-98)||(43410378-43410477)
chr2 (36-99)||(43115863-43115926)
chr2 (28-98)||(15359149-15359219)
chr2 (28-98)||(35313868-35313938)
chr2 (36-98)||(37322417-37322479)
chr2 (1-89)||(7494909-7495000)
chr2 (5-98)||(36794240-36794335)
chr2 (5-97)||(3323335-3323429)
chr2 (1-98)||(16463639-16463740)
chr2 (22-97)||(26863421-26863496)
chr2 (33-95)||(7438917-7438979)
chr2 (1-98)||(16377718-16377816)
chr2 (1-99)||(39785537-39785637)
chr2 (28-84)||(12520936-12520992)
chr2 (5-98)||(45235535-45235632)
chr2 (46-97)||(17346425-17346476)
chr2 (28-99)||(26608204-26608275)
chr2 (5-97)||(34120500-34120594)
chr2 (46-99)||(18202104-18202157)
chr2 (1-97)||(25637432-25637531)
chr2 (41-98)||(31448755-31448812)
chr2 (19-84)||(43699672-43699736)
chr2 (28-72)||(25904769-25904813)
chr2 (28-83)||(16028296-16028351)
chr2 (28-99)||(18853262-18853333)
chr2 (28-99)||(39329725-39329795)
chr2 (40-98)||(11742590-11742648)
chr2 (39-97)||(32831238-32831296)
chr2 (1-95)||(34451400-34451493)
chr2 (28-97)||(28170646-28170715)
chr2 (46-98)||(28186213-28186265)
[»] chr6 (38 HSPs)
chr6 (1-100)||(7920193-7920292)
chr6 (5-97)||(31894274-31894366)
chr6 (5-98)||(15058074-15058168)
chr6 (10-97)||(181517-181606)
chr6 (22-97)||(34657626-34657701)
chr6 (1-98)||(11143650-11143748)
chr6 (33-99)||(3720303-3720369)
chr6 (36-98)||(11656009-11656071)
chr6 (28-98)||(13087511-13087581)
chr6 (1-90)||(15582237-15582326)
chr6 (33-98)||(24983512-24983577)
chr6 (1-98)||(4367316-4367417)
chr6 (46-97)||(3291832-3291883)
chr6 (1-98)||(34299946-34300046)
chr6 (33-98)||(1781790-1781853)
chr6 (21-98)||(6801905-6801982)
chr6 (21-98)||(13909398-13909475)
chr6 (34-95)||(15046111-15046171)
chr6 (46-99)||(22398412-22398465)
chr6 (28-77)||(28106013-28106062)
chr6 (3-98)||(29363258-29363357)
chr6 (28-100)||(16205219-16205291)
chr6 (46-97)||(17828939-17828990)
chr6 (15-93)||(1224962-1225038)
chr6 (1-98)||(30716851-30716951)
chr6 (37-93)||(1063671-1063727)
chr6 (1-98)||(5302303-5302402)
chr6 (5-83)||(21425635-21425717)
chr6 (36-99)||(1225037-1225099)
chr6 (21-99)||(1956041-1956118)
chr6 (39-97)||(13206896-13206954)
chr6 (6-63)||(1517242-1517299)
chr6 (6-63)||(1519329-1519386)
chr6 (1-97)||(17835338-17835434)
chr6 (25-98)||(32440708-32440781)
chr6 (24-97)||(33510117-33510190)
chr6 (10-99)||(8695006-8695097)
chr6 (36-84)||(21010162-21010210)
[»] scaffold0024 (1 HSPs)
scaffold0024 (114-227)||(143086-143199)
[»] chr4 (67 HSPs)
chr4 (114-195)||(1814041-1814122)
chr4 (1-98)||(16821401-16821501)
chr4 (22-99)||(50264149-50264226)
chr4 (5-97)||(7061735-7061829)
chr4 (5-99)||(34360611-34360707)
chr4 (5-99)||(35311292-35311390)
chr4 (28-98)||(17237366-17237436)
chr4 (1-98)||(21240774-21240869)
chr4 (5-98)||(22129998-22130094)
chr4 (21-99)||(47464434-47464512)
chr4 (1-99)||(26147684-26147787)
chr4 (28-97)||(43237224-43237293)
chr4 (18-97)||(6643731-6643811)
chr4 (1-97)||(42616974-42617072)
chr4 (10-98)||(49428412-49428502)
chr4 (36-98)||(33790801-33790863)
chr4 (1-98)||(38405172-38405272)
chr4 (1-98)||(49176004-49176104)
chr4 (1-98)||(2066743-2066840)
chr4 (1-98)||(5841497-5841597)
chr4 (1-96)||(25233134-25233230)
chr4 (23-99)||(32884777-32884853)
chr4 (1-98)||(47773089-47773188)
chr4 (16-99)||(43902221-43902303)
chr4 (1-84)||(35251851-35251936)
chr4 (5-95)||(49746916-49747009)
chr4 (5-97)||(35380404-35380499)
chr4 (28-97)||(47359020-47359089)
chr4 (28-97)||(51624767-51624836)
chr4 (37-98)||(52247498-52247559)
chr4 (1-97)||(53412059-53412158)
chr4 (38-98)||(48914218-48914278)
chr4 (1-98)||(52859869-52859963)
chr4 (5-97)||(10754330-10754423)
chr4 (5-97)||(10968099-10968192)
chr4 (5-95)||(31370373-31370464)
chr4 (28-98)||(2942714-2942784)
chr4 (36-98)||(19265797-19265859)
chr4 (1-99)||(2653372-2653472)
chr4 (1-98)||(11907669-11907768)
chr4 (28-96)||(36985767-36985835)
chr4 (46-97)||(18741545-18741596)
chr4 (36-98)||(461947-462009)
chr4 (46-100)||(11288697-11288751)
chr4 (20-98)||(25142449-25142527)
chr4 (1-72)||(28500979-28501054)
chr4 (15-101)||(30260972-30261058)
chr4 (28-98)||(30682266-30682336)
chr4 (28-98)||(44536266-44536335)
chr4 (28-97)||(35998793-35998861)
chr4 (15-97)||(54506754-54506838)
chr4 (21-97)||(6609735-6609811)
chr4 (5-62)||(17121200-17121259)
chr4 (25-97)||(18532157-18532229)
chr4 (34-98)||(53346746-53346810)
chr4 (14-97)||(54202162-54202246)
chr4 (5-63)||(4972529-4972588)
chr4 (46-97)||(49579249-49579300)
chr4 (15-98)||(4739435-4739520)
chr4 (5-70)||(5618504-5618570)
chr4 (40-98)||(17114433-17114491)
chr4 (10-63)||(19627115-19627169)
chr4 (39-97)||(20612242-20612300)
chr4 (5-98)||(40122924-40123020)
chr4 (37-98)||(10672643-10672704)
chr4 (37-98)||(10886283-10886344)
chr4 (46-98)||(44526378-44526430)
[»] chr8 (44 HSPs)
chr8 (1-98)||(22771900-22771999)
chr8 (1-99)||(41091949-41092046)
chr8 (21-99)||(45425730-45425808)
chr8 (28-97)||(7172895-7172964)
chr8 (1-98)||(10180012-10180111)
chr8 (5-98)||(21216166-21216260)
chr8 (1-97)||(39405714-39405812)
chr8 (1-97)||(34948753-34948849)
chr8 (25-98)||(39301021-39301094)
chr8 (1-98)||(396676-396775)
chr8 (33-97)||(17823907-17823971)
chr8 (1-98)||(17719323-17719422)
chr8 (5-99)||(29226592-29226687)
chr8 (28-98)||(44761559-44761629)
chr8 (33-98)||(9300178-9300243)
chr8 (28-97)||(14855000-14855069)
chr8 (1-97)||(4428417-4428513)
chr8 (1-98)||(10098056-10098156)
chr8 (1-99)||(31270975-31271073)
chr8 (28-98)||(32476268-32476338)
chr8 (1-97)||(13335169-13335266)
chr8 (1-98)||(40996430-40996525)
chr8 (16-99)||(1739511-1739595)
chr8 (35-98)||(11977001-11977064)
chr8 (36-98)||(26626177-26626239)
chr8 (36-98)||(39482604-39482666)
chr8 (28-97)||(4924133-4924202)
chr8 (5-98)||(31231686-31231781)
chr8 (46-98)||(32678402-32678454)
chr8 (28-96)||(36006954-36007022)
chr8 (6-85)||(10953813-10953891)
chr8 (6-85)||(10961818-10961896)
chr8 (46-97)||(27294125-27294176)
chr8 (34-97)||(43719302-43719365)
chr8 (5-97)||(39466103-39466197)
chr8 (37-97)||(21649427-21649487)
chr8 (37-97)||(42886990-42887050)
chr8 (36-99)||(5053217-5053280)
chr8 (58-97)||(31331419-31331458)
chr8 (42-99)||(12559558-12559615)
chr8 (49-97)||(5356602-5356650)
chr8 (36-97)||(6796395-6796460)
chr8 (50-90)||(34057691-34057731)
chr8 (28-64)||(36967354-36967390)
[»] scaffold0159 (1 HSPs)
scaffold0159 (28-98)||(34083-34153)
[»] chr7 (51 HSPs)
chr7 (21-98)||(21350696-21350773)
chr7 (5-98)||(2459434-2459529)
chr7 (1-98)||(34947459-34947558)
chr7 (1-98)||(25571379-25571477)
chr7 (25-98)||(9785973-9786046)
chr7 (28-97)||(34100619-34100688)
chr7 (1-98)||(759162-759261)
chr7 (1-98)||(28202380-28202479)
chr7 (28-99)||(41506135-41506206)
chr7 (25-95)||(7463198-7463268)
chr7 (28-98)||(28103721-28103791)
chr7 (33-98)||(11373499-11373564)
chr7 (5-97)||(19271805-19271898)
chr7 (5-99)||(37245653-37245749)
chr7 (1-99)||(32346122-32346222)
chr7 (36-96)||(49101659-49101719)
chr7 (39-97)||(3178276-3178334)
chr7 (21-99)||(17828421-17828498)
chr7 (33-99)||(26974019-26974085)
chr7 (4-99)||(32018986-32019083)
chr7 (29-99)||(33819203-33819273)
chr7 (21-99)||(38391729-38391807)
chr7 (28-97)||(6495006-6495075)
chr7 (21-98)||(21390276-21390353)
chr7 (33-98)||(24516360-24516425)
chr7 (21-98)||(46478364-46478441)
chr7 (28-96)||(16904367-16904435)
chr7 (5-95)||(22738665-22738756)
chr7 (1-98)||(13961920-13962017)
chr7 (28-98)||(44424132-44424202)
chr7 (36-98)||(48608862-48608924)
chr7 (1-99)||(17610608-17610708)
chr7 (5-87)||(37490338-37490422)
chr7 (1-99)||(83343-83444)
chr7 (1-98)||(21760055-21760154)
chr7 (1-98)||(36790697-36790798)
chr7 (5-98)||(7457492-7457586)
chr7 (39-97)||(30546427-30546485)
chr7 (28-94)||(47045546-47045612)
chr7 (21-98)||(24166972-24167049)
chr7 (34-98)||(8592511-8592575)
chr7 (28-96)||(17610890-17610958)
chr7 (4-99)||(32018782-32018880)
chr7 (32-95)||(4958674-4958737)
chr7 (36-99)||(30865963-30866026)
chr7 (46-98)||(31930568-31930622)
chr7 (25-87)||(37490448-37490510)
chr7 (46-99)||(27920994-27921047)
chr7 (48-97)||(35333051-35333100)
chr7 (46-90)||(24122563-24122607)
chr7 (46-98)||(43873929-43873981)
[»] chr1 (59 HSPs)
chr1 (5-99)||(12039038-12039134)
chr1 (5-99)||(39864067-39864163)
chr1 (1-98)||(31042749-31042848)
chr1 (5-98)||(35367758-35367853)
chr1 (1-97)||(37506076-37506174)
chr1 (33-97)||(44707828-44707892)
chr1 (1-98)||(49224053-49224152)
chr1 (36-99)||(7759204-7759267)
chr1 (28-99)||(14757660-14757731)
chr1 (18-97)||(25089154-25089233)
chr1 (36-98)||(52429333-52429395)
chr1 (5-97)||(2572424-2572519)
chr1 (5-87)||(4659733-4659816)
chr1 (5-95)||(6785212-6785304)
chr1 (33-94)||(9307613-9307674)
chr1 (5-97)||(24991721-24991816)
chr1 (36-96)||(13579690-13579750)
chr1 (1-98)||(20209907-20210006)
chr1 (16-98)||(26093361-26093445)
chr1 (28-94)||(16395117-16395183)
chr1 (28-98)||(37276442-37276512)
chr1 (1-97)||(8896400-8896499)
chr1 (5-95)||(22856307-22856399)
chr1 (1-97)||(30755009-30755108)
chr1 (1-98)||(40144914-40145013)
chr1 (15-97)||(2137437-2137520)
chr1 (1-97)||(9379184-9379282)
chr1 (40-98)||(15699115-15699173)
chr1 (36-98)||(38787330-38787392)
chr1 (1-98)||(916979-917075)
chr1 (5-98)||(23169060-23169153)
chr1 (34-99)||(27896942-27897007)
chr1 (1-77)||(35682882-35682959)
chr1 (36-97)||(44761599-44761660)
chr1 (25-97)||(37177814-37177886)
chr1 (19-97)||(6023717-6023798)
chr1 (36-99)||(6160525-6160588)
chr1 (46-97)||(10495838-10495889)
chr1 (47-98)||(15904751-15904802)
chr1 (36-99)||(31978718-31978781)
chr1 (1-97)||(33733330-33733428)
chr1 (28-99)||(37539108-37539179)
chr1 (36-99)||(52837269-52837332)
chr1 (1-98)||(3260544-3260642)
chr1 (15-77)||(24500066-24500128)
chr1 (5-97)||(32826059-32826155)
chr1 (36-97)||(34031595-34031656)
chr1 (33-97)||(29778464-29778528)
chr1 (46-94)||(34331299-34331347)
chr1 (21-97)||(39887809-39887885)
chr1 (36-94)||(4441674-4441732)
chr1 (28-98)||(7351617-7351687)
chr1 (36-98)||(36701910-36701972)
chr1 (36-98)||(36718014-36718076)
chr1 (28-99)||(40261202-40261275)
chr1 (1-97)||(11449839-11449935)
chr1 (28-97)||(28436621-28436690)
chr1 (19-99)||(32219727-32219808)
chr1 (28-96)||(27721513-27721581)
[»] scaffold0095 (2 HSPs)
scaffold0095 (1-97)||(50156-50254)
scaffold0095 (5-97)||(22304-22398)
[»] scaffold0012 (1 HSPs)
scaffold0012 (36-98)||(105673-105735)
[»] scaffold0330 (1 HSPs)
scaffold0330 (1-98)||(5344-5441)
[»] scaffold0003 (1 HSPs)
scaffold0003 (5-97)||(252870-252962)
[»] scaffold0018 (1 HSPs)
scaffold0018 (34-98)||(136101-136165)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1-98)||(8045-8145)
[»] scaffold0182 (1 HSPs)
scaffold0182 (36-98)||(20417-20479)
[»] scaffold1809 (1 HSPs)
scaffold1809 (28-97)||(749-818)
[»] scaffold0110 (1 HSPs)
scaffold0110 (25-96)||(1682-1753)
[»] scaffold0011 (1 HSPs)
scaffold0011 (32-97)||(14233-14298)
[»] scaffold0302 (1 HSPs)
scaffold0302 (46-98)||(16097-16149)
[»] scaffold0016 (1 HSPs)
scaffold0016 (28-83)||(76273-76328)
[»] scaffold0583 (1 HSPs)
scaffold0583 (36-98)||(2014-2076)
[»] scaffold0294 (1 HSPs)
scaffold0294 (28-98)||(17016-17086)


Alignment Details
Target: chr3 (Bit Score: 112; Significance: 9e-57; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 99 - 227
Target Start/End: Complemental strand, 10305615 - 10305483
Alignment:
Q  99 atggaaaatgcttaa----gcgacaaaagtttcacgaatatcacacgagaaaagctcaaaagcggtgatttccttgttttatctctttttggttatacca 194  Q
    |||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10305615 atggaaaatgcttaacatcgcgacaaaagtttcacgaatatcacacgagaaaagctcaaaagcggtgatttccttgttttatctctttttggtgatacca 10305516  T
Q  195 tttatctctccccttgtttcaaactgttccact 227  Q
    |||||||||||||||||||||||||||||||||    
T  10305515 tttatctctccccttgtttcaaactgttccact 10305483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 99 - 213
Target Start/End: Complemental strand, 51005436 - 51005318
Alignment:
Q  99 atggaaaatgcttaa----gcgacaaaagtttcacgaatatcacacgagaaaagctcaaaagcggtgatttccttgttttatctctttttggttatacca 194  Q
    |||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  51005436 atggaaaatgcttaacatcgcgacaaaagtttcacgaatatcacacgagaaaagctcaaaagcggtgatttccttgttttatctctttttggtcatacca 51005337  T
Q  195 tttatctctccccttgttt 213  Q
    |||||||||||||||||||    
T  51005336 tttatctctccccttgttt 51005318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 4251260 - 4251358
Alignment:
Q  117 acaaaagtttcacgaatatcacacgagaaaagctcaaaagcggtgatttccttg-ttttatctctttttggttataccatttatctctccccttgtttc 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  4251260 acaaaagtttcacgaatatcacacgagaaaagctcaaaagcggtgatttccttgtttttatctctttttggtcataccatttatctctccccttgtttc 4251358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 39043918 - 39043822
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||||| |||||||||||  ||||||| ||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  39043918 ttagaataccaatgcaacatttattattttttcattattatacccttatttattgaatttcattcaacttaactactccactaactacaattaataa 39043822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 10366812 - 10366714
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttcac--tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||||| |||||||||||  |||||| |  ||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  10366812 ttagaataccaatgcaacatttattattttttcccattattatacccttatttattgaatttcatccaacttaactacttcactaactacaattaataa 10366714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 29024091 - 29024026
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataagatg 101  Q
    |||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||    
T  29024091 tattataccattatttattgaatttcatccaacttaattactccactaactacaattaataagatg 29024026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 19822964 - 19823062
Alignment:
Q  1 ttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||| || |||||||| | ||||||| || |||||| |||||||||||||||||| |||||||| || | ||||||||||||||||||||    
T  19822964 ttagaataccaatgcagcatttattatttttttcattaatatacccttatttattgaatttcatccaacttaactattccactaactacaattaataag 19823062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 37695830 - 37695730
Alignment:
Q  1 ttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||||| |||||||||||  |||||   || ||||||||| ||||||||||||||||||  ||||||| |||| |||||||||||||||||||    
T  37695830 ttagaataccaatgcaacatttattattttttttccattattatacccttatttattgaatttcatctaacttaactactccactaactacaattaataa 37695731  T
Q  98 g 98  Q
    |    
T  37695730 g 37695730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 12904845 - 12904914
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||| |||||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||||    
T  12904845 ttttccactattatacccttatttattgaatttcatccaacttaattactccactaactacaattaataa 12904914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 8679188 - 8679118
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||| |||||||||||| |||||||||||||||||| |||||||| || ||||||||||| ||||||||||    
T  8679188 ttttccactattatacccttatttattgaatttcatccaacttaattaattcactaactataattaataag 8679118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 23004516 - 23004446
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| ||| ||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  23004516 tttttcacttttacacccttatttattgaatttcatacaacttaactactccactaactacaattaataag 23004446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 23068155 - 23068249
Alignment:
Q  5 aataccaatacaacatttatttatttt-tcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||| ||||||||||||||||  |||| ||| ||||||||  ||||||||||||||||||  |||||||||| ||||| ||||||||||||||||    
T  23068155 aatatcaatacaacatttattatttttgtcattattatacttttatttattgaatttcatctaacttaaatatttcacaaactacaattaataag 23068249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 36460545 - 36460479
Alignment:
Q  33 cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||||||||||| |||||||||||||||||| |||||||| |||| || ||||||||||||||||||    
T  36460545 cactattatacccttatttattgaatttcatccaacttaattactccattaactacaattaataaga 36460479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 43254023 - 43253927
Alignment:
Q  5 aataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| |||||||||||  |||||   |||||||||||| ||||||| |||||||||| | |||||| |||| ||||||||||||||||||||    
T  43254023 aataccaatgcaacatttattagtttttttccactattatacccttatttaatgaatttcatcccacttaactactccactaactacaattaataag 43253927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 30711026 - 30711123
Alignment:
Q  1 ttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||| |||||||||||||||| | |||||||||||||||   ||||||||||||||||||  ||||||| | || || ||||||||||||||||    
T  30711026 ttagaatatcaatacaacatttattatttttttcactattataatcttatttattgaatttcatctaacttaattgctccattaactacaattaataa 30711123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 37497447 - 37497539
Alignment:
Q  5 aataccaatacaacatttatt--tattttt-cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaa 94  Q
    |||||||||||||||||||||  ||||||| || ||||||||  |||||||||||||||||| |||||||| |||| ||||||||||| ||||    
T  37497447 aataccaatacaacatttattattattttttcattattatacgtttatttattgaatttcatccaacttaactactccactaactacagttaa 37497539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 3901309 - 3901212
Alignment:
Q  4 gaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||||||||  ||||||||||  |||||  || ||||||||| |||||||||||||||||| |||||||| |||  |||||||||||| ||||||||    
T  3901309 gaataccaatgtaacatttattatttttttccattattatacccttatttattgaatttcatccaacttaagtaccccactaactacaactaataaga 3901212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 11632053 - 11632131
Alignment:
Q  19 atttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||  ||||||||||||||||  |||||||||||||||||| |||||||| |  | |||||||||||||||||||    
T  11632053 atttattattttttcactattatacttttatttattgaatttcatccaacttaacttttccactaactacaattaataa 11632131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 11905775 - 11905873
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||| |||| |||||||||||  |||||| | ||||||| | |||||||||||||||||| ||||||||  ||| || |||||||||||||||||    
T  11905775 ttagaatatcaatgcaacatttattattttttccattattatatctttatttattgaatttcatccaacttaacaactccattaactacaattaataag 11905873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 17652741 - 17652803
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| ||||||||| |||||||| |||||||| ||| |||||||||||||||||||||    
T  17652741 tattatacccttatttattaaatttcatccaacttaactacctcactaactacaattaataag 17652803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 3313236 - 3313305
Alignment:
Q  29 ttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||| |||||||   |||||||||||||||||| ||||||||||||| || |||||||||||||||||    
T  3313236 ttttcattattataatcttatttattgaatttcatccaacttaaatactccattaactacaattaataag 3313305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 12736705 - 12736636
Alignment:
Q  29 ttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||||||||||| ||||||||||||||| || ||| |||| |||| |||||| |||||||||||||    
T  12736705 ttttcactattatacccttatttattgaattttatccaaattaactactacactaagtacaattaataag 12736636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 44301517 - 44301613
Alignment:
Q  5 aataccaatacaacatttatt--tatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||| |||| |||||||||||  |||||||| ||||||||||  |||||||||||||||||| |||||||| |||| |||||| ||||||| |||||    
T  44301517 aatatcaatgcaacatttattaatatttttccactattatactcttatttattgaatttcatccaacttaactactccactaattacaattgataag 44301613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 51838100 - 51838023
Alignment:
Q  21 ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||| |||| |||||||||||| ||||||| ||||||||||||||| ||| |||| ||||| |||||| |||||||    
T  51838100 ttattttttttccactattatacccttatttaatgaatttcattcaacgtaactactccactagctacaactaataag 51838023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 36476536 - 36476635
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttc--actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||| || ||||||||  |||||   | ||||||||| ||||||||||||||||||  ||||||| ||||  |||||||||||||||||||    
T  36476536 ttagaataccaatgcagcatttattacttttttctattattatacccttatttattgaatttcatcaaacttaactactctactaactacaattaataag 36476635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 1778624 - 1778687
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaat 91  Q
    ||||||| ||||||||| |||||||||||||||||| |||||||  |||| |||||||||||||    
T  1778624 tttttcattattatacccttatttattgaatttcatccaacttatctactccactaactacaat 1778687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 27471291 - 27471387
Alignment:
Q  5 aataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||||||||||| |||||||| ||||||   |||||  ||||| ||||||||||||||||||||||||||| |||| |||||  || |||||||||||    
T  27471291 aataccaatacagcatttatt-atttttgtccactaccatacctttatttattgaatttcattcaacttaactactccactacttataattaataaga 27471387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 34750472 - 34750547
Alignment:
Q  23 atttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||| ||||| ||||||||||||||||||||| | |||||| ||| |||| |||| ||| ||||||||||||||||    
T  34750472 attttttttttactattataccattatttattaattttcatccaagttaactactccaccaactacaattaataag 34750547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 41351688 - 41351629
Alignment:
Q  38 ttataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||| ||||||||||||||||||||||||||| |||| |||||||||  ||||||||    
T  41351688 ttatacctttatttattgaatttcattcaacttaactactccactaactatcattaataa 41351629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 24569214 - 24569164
Alignment:
Q  48 atttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||| ||||||||||||||||||| |||| ||||||||||||||||||||    
T  24569214 atttaatgaatttcattcaacttaactactccactaactacaattaataag 24569164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 30190786 - 30190724
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||| |||| ||||| |||||||||||| |||||||| |||| ||||||||||||||||||||    
T  30190786 tattttacccttattaattgaatttcatccaacttaactactccactaactacaattaataag 30190724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 37311939 - 37312001
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||  ||||||||||||||||||| || |||| |||| ||||||||||||||||||||    
T  37311939 tattatactcttatttattgaatttcattaaatttaactactccactaactacaattaataag 37312001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 52290846 - 52290944
Alignment:
Q  1 ttagaataccaatacaacatttatttattttt-cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||| || ||||||||  ||||| || ||| ||| | |||||||||||| || ||||||||||| |||| ||||||||| ||||||||||    
T  52290846 ttagaataccaatgcagcatttattattttttacattataatatccttatttattgaactttattcaacttaactactccactaactataattaataag 52290944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 40462273 - 40462366
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaa 94  Q
    |||||||  |||| |||||||||||| |||  ||||||||||| | |||||||||||||| || |||||||| ||||   ||||||||||||||    
T  40462273 ttagaatgtcaatgcaacatttatttttttcccactattatacaactatttattgaattttatccaacttaactactcttctaactacaattaa 40462366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 28690907 - 28690847
Alignment:
Q  37 attataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||  |||||||||||||||||| |||||||| ||  ||||||||||||||||||||    
T  28690907 attatacatttatttattgaatttcatccaacttaactatctcactaactacaattaataa 28690847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 31158645 - 31158601
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaa 72  Q
    ||||||||||||||||||||||||||||||||||||  |||||||    
T  31158645 tttttcactattataccattatttattgaatttcatctaacttaa 31158601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 38795296 - 38795395
Alignment:
Q  1 ttagaataccaatacaacattta--tttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||| ||| ||||   |||||||| ||||||||| || || |||||| |||||||| ||||||||  ||| ||| ||||||||||||||||    
T  38795296 ttagaataccaatgcaatattttattttattttccactattatgcccttttttattaaatttcatccaacttaacaactccaccaactacaattaataag 38795395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 30682211 - 30682128
Alignment:
Q  18 catttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataagat 100  Q
    ||||||| |||||||| | ||| |||| ||||||||||||||||| | |||||||| || | || |||||||||||||||||||    
T  30682211 catttatatatttttctattatcatactattatttattgaatttcgtccaacttaattattccattaactacaattaataagat 30682128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 33491489 - 33491422
Alignment:
Q  33 cactattataccattatttattgaa-tttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||||||||||| ||||||||| || |||||| |||||||| |||| ||||||||| |||||||||||    
T  33491489 cactattatacccttatttattaaaatttcatacaacttaactactccactaactataattaataaga 33491422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 37773125 - 37773028
Alignment:
Q  5 aataccaatacaacatttattt-attttt---cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| || ||||||||| ||||||   || ||||||||| ||||||| ||||||||||||||||||| || | |||| |||| ||||||||||    
T  37773125 aataccaatgcagcatttattttatttttttccattattatacccttatttaatgaatttcattcaacttaactattccactgactataattaataag 37773028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 97
Target Start/End: Original strand, 45710849 - 45710900
Alignment:
Q  46 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||||||| ||||| |||||||| |||| |||||||||||||||||||    
T  45710849 ttatttattgaacttcatccaacttaactactccactaactacaattaataa 45710900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 5323063 - 5323001
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| ||||||||||||||||||  ||||||| ||||| ||||| || ||||||||||    
T  5323063 tattatacccttatttattgaatttcatcaaacttaactactttactaattataattaataag 5323001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 38137583 - 38137509
Alignment:
Q  25 ttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||||| |||||||||| | ||||||||||||||||||  || |||| |||  ||||||||||| |||||||||    
T  38137583 ttattttccactattatatctttatttattgaatttcatcgaatttaactaccccactaactacagttaataaga 38137509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 40194477 - 40194555
Alignment:
Q  21 ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||||| |||| |||||||||| | ||||||||| |||||| | ||||| || |||  |||||||||||||||||||||    
T  40194477 ttattttttttccactattatatctttatttattaaatttcttccaactcaactacgccactaactacaattaataaga 40194555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 53560168 - 53560268
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttcactattatacca---ttatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||| ||| || |||||||||||||||  | |||||| ||   |||||||||||| |||||||||||||| ||||  |||||||| | |||||||    
T  53560168 ttagaatactaatgcagcatttatttatttttttccattataacacccttatttattgaacttcattcaacttaactactctactaactatatttaataa 53560267  T
Q  98 g 98  Q
    |    
T  53560268 g 53560268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 25108683 - 25108594
Alignment:
Q  5 aataccaatacaacatttatttattttt-cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaatta 93  Q
    |||| ||||| || |||||||||||||| ||||| ||||   |||||||||||||||||||| | |||| ||||||| ||||||| ||||    
T  25108683 aatatcaatataatatttatttattttttcactaatatatttttatttattgaatttcattctatttaactacttcattaactacgatta 25108594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 95
Target Start/End: Original strand, 37804796 - 37804833
Alignment:
Q  58 tttcattcaacttaaatacttcactaactacaattaat 95  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  37804796 tttcattcaacttaactacttcactaactacaattaat 37804833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 38705174 - 38705227
Alignment:
Q  46 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||||||||||||||||  ||||||| ||||  ||||||||||||||||||||    
T  38705174 ttatttattgaatttcatctaacttaattactcaactaactacaattaataaga 38705227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 41038509 - 41038456
Alignment:
Q  46 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||||||||||| ||||  |||||||| ||||||| ||||||||||||||||||    
T  41038509 ttatttattgaacttcaaccaacttaactacttcattaactacaattaataaga 41038456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 14194534 - 14194594
Alignment:
Q  25 ttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaac 85  Q
    |||||| ||| ||||||||| ||||| |||||||||||| |||||||| |||| |||||||    
T  14194534 ttatttgtcattattatacctttattaattgaatttcatccaacttaattactccactaac 14194594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 19611908 - 19611960
Alignment:
Q  46 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||||||||  ||||||| |||| ||||||| ||||||||||||    
T  19611908 ttatttattgaatttcatcaaacttaactactccactaacaacaattaataag 19611960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 34957502 - 34957554
Alignment:
Q  46 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||||||||| |||| || |||| ||||||||| ||||||||||    
T  34957502 ttatttattgaatttcatttaactgaactactccactaactataattaataag 34957554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 54726437 - 54726535
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttcac--tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||| ||| |||||||||||  |||||| |  ||| ||||| ||||||||| || |||||  ||||||| |||| || ||||||||||||||||    
T  54726437 ttagaatactaatgcaacatttattagtttttcccattataatacccttatttattaaacttcatctaacttaactactccattaactacaattaataa 54726535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 45811590 - 45811648
Alignment:
Q  15 caacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaa 72  Q
    ||||||||||| | |||||||||| ||||  ||||||||||||||||||||||| ||||    
T  45811590 caacatttattatttttttcactaatatattattatttattgaatttcattcaatttaa 45811648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 48541109 - 48541063
Alignment:
Q  53 ttgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||||||||||||||||||| ||||  ||||| ||||||||||||||    
T  48541109 ttgaatttcattcaacttaactactcaactaattacaattaataaga 48541063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 26467101 - 26467161
Alignment:
Q  39 tataccattatttattgaatttcattcaacttaaatacttca--ctaactacaattaataa 97  Q
    |||| ||||||||||||||||||||  ||||||| |||||||   ||||||||||||||||    
T  26467101 tatatcattatttattgaatttcatctaacttaactacttcattataactacaattaataa 26467161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 24703648 - 24703692
Alignment:
Q  33 cactattataccattatttattgaatttcattcaacttaaatact 77  Q
    |||||||||| | |||||||||||||||||| |||||||| ||||    
T  24703648 cactattatatctttatttattgaatttcatccaacttaactact 24703692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 36463062 - 36463010
Alignment:
Q  46 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| |||||||| |||||||| |||| ||| ||| ||||||||||||    
T  36463062 ttatttatttaatttcatccaacttaattactccacaaacaacaattaataag 36463010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 49447919 - 49447855
Alignment:
Q  34 actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||| ||||||||| ||||||||  || |||| || |  |||||||||||||||||||    
T  49447919 actattatacccttatttattaaatttcatcaaatttaactattctactaactacaattaataag 49447855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 54477564 - 54477524
Alignment:
Q  57 atttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||||||||||| |||| || ||||||||||||||||    
T  54477564 atttcattcaacttaactactccattaactacaattaataa 54477524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 3e-44; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 114 - 228
Target Start/End: Original strand, 4246090 - 4246204
Alignment:
Q  114 gcgacaaaagtttcacgaatatcacacgagaaaagctcaaaagcggtgatttccttgttttatctctttttggttataccatttatctctccccttgttt 213  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  4246090 gcgacaaaagtttcacgaatatcacatgagaaaagctcaaaagcggtgatttctttgttttatctctttttggtcataccatttatctctccccttgttt 4246189  T
Q  214 caaactgttccactt 228  Q
    |   |||||||||||    
T  4246190 cctgctgttccactt 4246204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 6315938 - 6315839
Alignment:
Q  1 ttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||| |||||||||||  |||||| || ||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  6315938 ttagaataccaatgcaacatttattattattttccattattatacccttatttattgaatttcatccaacttaactacttcactaactacaattaataag 6315839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 1248765 - 1248666
Alignment:
Q  1 ttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||| |||| |||||||||||  ||||||||| ||||||||| ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  1248765 ttagaatatcaatgcaacatttattattatttttcattattatacccttattaattgaattttattcaacttaactacttcactaactacaattaataag 1248666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 19929898 - 19929997
Alignment:
Q  1 ttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||| |||||||||||  |||||| || ||||||||| |||||||||||||||||| |||||||| || ||||||||||||||||||||||    
T  19929898 ttagaataccaatgcaacatttattattattttccattattatacccttatttattgaatttcatccaacttaactatttcactaactacaattaataag 19929997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 21060583 - 21060682
Alignment:
Q  1 ttagaataccaatacaacatttattt-atttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||||||| |||| || ||||||||| ||||| || ||||||||||||||||||||||||| || |||||||| |||| |||||||||||||||||||||    
T  21060583 ttagaatatcaatgcatcatttattttattttccattattataccattatttattgaattttatccaacttaactactccactaactacaattaataaga 21060682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 8725144 - 8725071
Alignment:
Q  25 ttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||||| |||||||| ||||||||||||||||||||||| |||| |||| ||||||||||||||||||||    
T  8725144 ttatttttcattattatactattatttattgaatttcattcaagttaactactccactaactacaattaataag 8725071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 6753819 - 6753720
Alignment:
Q  1 ttagaataccaatacaacatttatt-tatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||| ||||||||||| | |||||| | ||||||||| ||||||||| |||||||| |||||||| |||| ||||||||||||||||||||    
T  6753819 ttagaataccaatgcaacatttattatctttttccattattatacccttatttattaaatttcatccaacttaactactccactaactacaattaataag 6753720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 8698283 - 8698360
Alignment:
Q  21 ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||| |||| |||||||||||| |||||||||||||||||| ||||||||  ||| ||||||||||||||||||||    
T  8698283 ttattttttttccactattatacccttatttattgaatttcatccaacttaaccactccactaactacaattaataag 8698360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 29374323 - 29374392
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||||||||    
T  29374323 tttttcactattatacccttatttattgaattttattcaatttaactactccactaactacaattaataa 29374392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 31655039 - 31655104
Alignment:
Q  33 cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  31655039 cactattatacccttatttattgaatttcattcaacataattactccactaactacaattaataag 31655104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 4440986 - 4441071
Alignment:
Q  14 acaacatttatt-tatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||||||| | |||||| ||||||||||| |||||||||||||||||| ||| |||| |||| |||||||||||||||||||    
T  4440986 acaacatttattatttttttctactattataccgttatttattgaatttcatccaatttaactactccactaactacaattaataa 4441071  T

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Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 6753985 - 6754081
Alignment:
Q  5 aataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||||||| |||||||| ||| |||||  ||  | |||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||||||    
T  6753985 aataccaatgcaacattttttttttttttccatcaatatacccttatttattgaatttcatccaacttaactactccactaactacaattaataaga 6754081  T

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Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 29570347 - 29570442
Alignment:
Q  5 aataccaatacaacatttatttattt---ttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||||||||| ||||||| |||   |||||||||||||  |||||||||||||||||| |||||||| || | || ||||||||||||||||    
T  29570347 aataccaatacaacgtttatttttttcttttcactattatactcttatttattgaatttcatccaacttaactattccattaactacaattaataa 29570442  T

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Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 40530363 - 40530286
Alignment:
Q  21 ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||  |||||||||||| ||||||||| |||||||| ||||||||  ||| ||||||||||||||||||||    
T  40530363 ttatttatttcccactattatacccttatttatttaatttcatccaacttaaccactccactaactacaattaataag 40530286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 40899896 - 40899969
Alignment:
Q  25 ttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||| || ||||||||| ||||||||||||||||||  ||||||| |||| ||||||||||||||||||||    
T  40899896 ttattttccattattatacccttatttattgaatttcatctaacttaactactccactaactacaattaataag 40899969  T

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Target: chr5; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 41496036 - 41496130
Alignment:
Q  5 aataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||| ||| |||||||||||  | |||| |||||||||||| |||||||||| ||||||| ||| |||| |||| |||||||||||||||||||    
T  41496036 aatactaatgcaacatttattattcttttccactattatacctttatttattgcatttcatccaatttaactactccactaactacaattaataa 41496130  T

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Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 7828058 - 7827988
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||| ||||||| | ||||||||| |||||||| |||||||| |||| ||||||||||||||||||||    
T  7828058 tttttcattattatatccttatttattaaatttcatccaacttaactactccactaactacaattaataag 7827988  T

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Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 4818537 - 4818602
Alignment:
Q  33 cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||||||| ||||||||||||||||||  |||||||  ||| ||||||||||||||||||||    
T  4818537 cactattatacccttatttattgaatttcatctaacttaatcactccactaactacaattaataag 4818602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 9515714 - 9515777
Alignment:
Q  25 ttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactac 88  Q
    ||||||| |||||||||||  ||||||| ||||||||||||||||||| |||| ||||||||||    
T  9515714 ttattttccactattatactcttatttaatgaatttcattcaacttaactactccactaactac 9515777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 27542784 - 27542847
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||||||  ||||||||||||||| || |||||||| |||| |||||||||||||||||||||    
T  27542784 tattatactcttatttattgaattttatccaacttaactactccactaactacaattaataaga 27542847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 22848512 - 22848446
Alignment:
Q  32 tcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||| |||||||||||||||||| |||  ||| |||| || |||||||||||||||||    
T  22848512 tcactattatacccttatttattgaatttcatccaatctaactactccattaactacaattaataag 22848446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 27580589 - 27580651
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||  ||||||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  27580589 tattatacatttatttaattaatttcattcaacttaactactccactaactacaattaataag 27580651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 41480101 - 41480176
Alignment:
Q  1 ttagaataccaatacaacatttatt----tatttttcactattataccattatttattgaatttcattcaacttaa 72  Q
    |||||||| |||| |||||||||||    | ||||||||||||||||| |||||||||||||||||| ||||||||    
T  41480101 ttagaatatcaatgcaacatttattattatttttttcactattatacctttatttattgaatttcatccaacttaa 41480176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 6616018 - 6615942
Alignment:
Q  21 ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||| |||| |||||||||||| |||||||||||| ||||| ||||||||  ||| ||||||||| ||||||||||    
T  6616018 ttattttttttccactattatacccttatttattgaa-ttcatccaacttaaccactccactaactaaaattaataag 6615942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 32439823 - 32439902
Alignment:
Q  1 ttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatact 77  Q
    |||||||||||||||||||||||||  |||||   |||||||||| |  ||||||||||||||||| |||||||| ||||    
T  32439823 ttagaataccaatacaacatttattgttttttttccactattatatccctatttattgaatttcatccaacttaactact 32439902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 3348291 - 3348192
Alignment:
Q  1 ttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||| || ||||||||  |||||  || ||| ||| | |||||||||||| ||||| |||||||| |||||||| ||||||| ||||||||    
T  3348291 ttagaataccaatgcagcatttattatttttttccattataatatccttatttattgaacttcatccaacttaattacttcaccaactacatttaataag 3348192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 11796308 - 11796230
Alignment:
Q  18 catttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||| |||| ||||| |||||  ||||||||| ||||||||  ||||||| |||| |||||||||||||||||||    
T  11796308 catttattt-ttttccactagtatactcttatttattaaatttcatctaacttaactactacactaactacaattaataa 11796230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 2232195 - 2232145
Alignment:
Q  34 actattataccattatttattgaatttcattcaacttaaatacttcactaa 84  Q
    ||||||||||| |||||||||||||||||| |||||||| |||| ||||||    
T  2232195 actattatacccttatttattgaatttcatccaacttaactactccactaa 2232145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 26285592 - 26285542
Alignment:
Q  46 ttatttattgaatttcattcaacttaaatacttcactaactacaattaata 96  Q
    ||||||||||||||| || |||||||| ||||||| |||||||||||||||    
T  26285592 ttatttattgaattttatacaacttaactacttcattaactacaattaata 26285542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 41062320 - 41062222
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||| |||||||||||  |||||| | ||| ||||| |||||||||||| | ||| || ||||| || |  |||||||||||||||||||    
T  41062320 ttagaataccaatgcaacatttattattttttccattataatacccttatttattgaactccatccagcttaattattctactaactacaattaataag 41062222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 39325834 - 39325903
Alignment:
Q  19 atttatttatttttcactattataccatt-atttattgaatttcattcaacttaaatacttcactaacta 87  Q
    |||||||| |||| |||||||||| |||| ||||||||||||| || |||||||| |||| |||||||||    
T  39325834 atttattttttttccactattatatcatttatttattgaatttaatccaacttaactactccactaacta 39325903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 41478735 - 41478810
Alignment:
Q  1 ttagaataccaatacaacatttatt--tatttttc--actattataccattatttattgaatttcattcaacttaa 72  Q
    |||||||| |||| |||||||||||  |||||||   ||||||||||| |||||||||||||||||| ||||||||    
T  41478735 ttagaatatcaatgcaacatttattattattttttctactattatacctttatttattgaatttcatccaacttaa 41478810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 42803744 - 42803683
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||  |||||||||||||||||| ||||||||  ||| || ||||||||||||||||    
T  42803744 tattatactcttatttattgaatttcatccaacttaaccactccattaactacaattaataa 42803683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 843286 - 843333
Alignment:
Q  45 attatttattgaatttcattcaacttaaatacttcactaactacaatt 92  Q
    |||||| ||||||||||||||||||||| ||||| | |||||||||||    
T  843286 attattcattgaatttcattcaacttaattactttattaactacaatt 843333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 97
Target Start/End: Original strand, 18841478 - 18841529
Alignment:
Q  46 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||||||||||||  ||| |||| || |||||||||||||||||||||    
T  18841478 ttatttattgaatttcacccaatttaattatttcactaactacaattaataa 18841529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 29856056 - 29856099
Alignment:
Q  56 aatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||| |||||||||||| |||| |||||||||||||||||||||    
T  29856056 aattgcattcaacttaactactccactaactacaattaataaga 29856099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 30512843 - 30512757
Alignment:
Q  5 aataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactaca 89  Q
    ||||| ||| ||||||| ||||||||||  ||  |||||| | ||||||||| |||||||| |||||||| || |||||||||||||    
T  30512843 aatactaatgcaacattcatttattttttccatcattatatccttatttattaaatttcatccaacttaactatttcactaactaca 30512757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 30553183 - 30553097
Alignment:
Q  5 aataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactaca 89  Q
    ||||| ||| ||||||| ||||||||||  ||  |||||| | ||||||||| |||||||| |||||||| || |||||||||||||    
T  30553183 aatactaatgcaacattcatttattttttccatcattatatccttatttattaaatttcatccaacttaactatttcactaactaca 30553097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 15818609 - 15818545
Alignment:
Q  33 cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||| || ||||||||| |||||||| ||| |||| |||| |||| | ||||||||||||    
T  15818609 cactattatgcctttatttattaaatttcatccaatttaactactccactgattacaattaataa 15818545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 1e-43; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 115 - 228
Target Start/End: Complemental strand, 13761667 - 13761554
Alignment:
Q  115 cgacaaaagtttcacgaatatcacacgagaaaagctcaaaagcggtgatttccttgttttatctctttttggttataccatttatctctccccttgtttc 214  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13761667 cgacaaaagtttcacaaatatcacacgagaaaagctcaaaagtggtgatttccttgttttatctctttttggtcataccatttatctctccccttgtttc 13761568  T
Q  215 aaactgttccactt 228  Q
       |||||||||||    
T  13761567 ctgctgttccactt 13761554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 36354603 - 36354504
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||||||||||| ||  |||||||  |||||| | |||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||    
T  36354603 ttagaataccaatgcagaatttattattttttccattattataccattatttattgaatttcatccaacttaactactccactaactacaattaataaga 36354504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 5789780 - 5789710
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||| ||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||    
T  5789780 ttttccactattataccattatttattgaatttcatccaacttaactatttcactaactacaattaataag 5789710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 35242458 - 35242360
Alignment:
Q  1 ttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||||| ||| |||||||  || |||||||||||||||  |||||||||||||||||| |||||||| ||||  ||||||||||||||||||    
T  35242458 ttagaataccaatgcaatatttattattagttttcactattatacttttatttattgaatttcatccaacttaactactcaactaactacaattaataa 35242360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 8947208 - 8947114
Alignment:
Q  5 aataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| ||| ||||||| | ||||||| ||||||||| |||||||||||||||||| |||||||| |||| ||||||||| ||||||||||    
T  8947208 aataccaatgcaatatttattatttttttcattattatacccttatttattgaatttcatccaacttaactactccactaactataattaataag 8947114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 34225571 - 34225641
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||| ||||||||| ||||||||| |||||||||||||||||||||| || |||||||||||||||||    
T  34225571 tttttcattattatacccttatttattaaatttcattcaacttaaatactccattaactacaattaataag 34225641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 19937374 - 19937437
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||||||| ||||||||||||||| ||||||||||| |||| |||||||||||||||||||||    
T  19937374 tattatacctttatttattgaattttattcaacttaactactccactaactacaattaataaga 19937437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 9458426 - 9458328
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||| || ||||||||  |||||| | ||||||||| ||||||||| |||||||| |||||| | |||| ||||||||||||||||||||    
T  9458426 ttagaataccaatgcagcatttattattttttccattattatacccttatttattaaatttcatccaactttactactccactaactacaattaataag 9458328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 39691468 - 39691542
Alignment:
Q  25 ttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||||| || ||||||||| ||||||||||||||||||||||||| | |||| |||||||| ||||||||||||    
T  39691468 ttattttccattattatacccttatttattgaatttcattcaactttactactccactaactgcaattaataaga 39691542  T

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Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 5272299 - 5272204
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttcac--tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaat 95  Q
    ||||||||| ||| ||||||||||| ||||||| |  ||||||||| |||||||||||||||||| ||| |||| |||| |||||||||||||||||    
T  5272299 ttagaatacaaatgcaacatttatt-atttttcccattattatacccttatttattgaatttcatccaatttaattactccactaactacaattaat 5272204  T

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Target: chr2; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 14523533 - 14523434
Alignment:
Q  1 ttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||| |||| |||||||||||  |||||| || ||||||| | ||||| ||||||||||||  ||||||| |||| ||||||||||||||||||||    
T  14523533 ttagaatatcaatgcaacatttattattattttccattattatatccttattaattgaatttcatctaacttaactactccactaactacaattaataag 14523434  T

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Target: chr2; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 17695280 - 17695382
Alignment:
Q  1 ttagaataccaatacaacatttatt--tattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaata 96  Q
    |||||||| |||| || ||||||||  |||||||  |||||||||||| |||||||||||||||||| |||||||| ||||  |||||||| ||||||||    
T  17695280 ttagaatatcaatgcagcatttattattattttttccactattatacccttatttattgaatttcatccaacttaactactctactaactataattaata 17695379  T
Q  97 aga 99  Q
    |||    
T  17695380 aga 17695382  T

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Target: chr2; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 38188043 - 38187947
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaata 96  Q
    ||||||||||||  ||||||||||| ||||||| |||  |||||||||||||||||||||||| |  ||||| |||||  |||||||||||||||||    
T  38188043 ttagaataccaaatcaacatttattaatttttccactcatataccattatttattgaatttcacttcacttacatactcgactaactacaattaata 38187947  T

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Target: chr2; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 43410378 - 43410477
Alignment:
Q  1 ttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| ||| |||||||||||  |||||  || ||||||||  | ||||||||||||||||||||||||| |||| || |||||||||||||||||    
T  43410378 ttagaatactaatgcaacatttattatttttttccattattatactctcatttattgaatttcattcaacttaactactccattaactacaattaataag 43410477  T

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Target: chr2; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 43115926 - 43115863
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||||||||||||||  |||||||||||||||||||| |||| ||||||||||||| |||||||    
T  43115926 tattataccattattcgttgaatttcattcaacttaactactccactaactacaataaataaga 43115863  T

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Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 15359219 - 15359149
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||| ||| ||||| |||||||||||| ||||| |||||||| |||| ||||||||||||||||||||    
T  15359219 tttttcattataatacccttatttattgaacttcatccaacttaactactccactaactacaattaataag 15359149  T

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Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 35313868 - 35313938
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||| |||||||||||  ||||||||||||||||||  ||||||| |||| ||||||||||||||||||||    
T  35313868 ttttccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataag 35313938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 37322417 - 37322479
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| ||||||||||||||||||  ||||||| |||| ||||||||||||||||||||    
T  37322417 tattatacccttatttattgaatttcatctaacttaactactccactaactacaattaataag 37322479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 7495000 - 7494909
Alignment:
Q  1 ttagaataccaatacaacatttatt---tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactaca 89  Q
    ||||||||||||| || ||||||||   | ||||||| ||||||||| |||||||||||||||||| |||||||| |||| | |||||||||    
T  7495000 ttagaataccaatgcagcatttattatttttttttcattattatacccttatttattgaatttcatccaacttaactactccgctaactaca 7494909  T

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Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 36794240 - 36794335
Alignment:
Q  5 aataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| || ||||||||  | ||||||| ||| ||||| |||||||||||| ||||| |||||||| |||| ||||||||||| ||||||||    
T  36794240 aataccaatgcagcatttattattttttttcattataatacccttatttattgaacttcatccaacttaactactccactaactacagttaataag 36794335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 3323429 - 3323335
Alignment:
Q  5 aataccaatacaacatttatttatttttc--actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||| || ||||||||  ||||||  ||||||| ||  ||| |||||||||||||| |||||||| |||| |||||||||||||||||||    
T  3323429 aataccaatgcagcatttattattttttcccactattacactcttacttattgaatttcatccaacttaactactccactaactacaattaataa 3323335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 16463639 - 16463740
Alignment:
Q  1 ttagaataccaatacaacatttatt--tattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaata 96  Q
    ||||||||||||| || ||||||||  |||||||  || |||| |||||||||||||| ||||||||  ||||| | |||| ||||||||||||||||||    
T  16463639 ttagaataccaatgcagcatttattattattttttccattattttaccattatttattaaatttcatcaaactttactactccactaactacaattaata 16463738  T
Q  97 ag 98  Q
    ||    
T  16463739 ag 16463740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 26863496 - 26863421
Alignment:
Q  22 tatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||| |||| |||||||||||  ||||||| |||||||||| | |||||| |||| |||||||||||||||||||    
T  26863496 tatttcttttccactattatacatttatttaatgaatttcatccgacttaactactccactaactacaattaataa 26863421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 7438979 - 7438917
Alignment:
Q  33 cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaat 95  Q
    |||||||||||| ||||||||||||||||||||||||||| |||| || ||| || |||||||    
T  7438979 cactattatacccttatttattgaatttcattcaacttaactactccaataattataattaat 7438917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 16377816 - 16377718
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaac----ttaaatacttcactaactacaattaata 96  Q
    |||||||| |||| |||||||| |||   ||||||||||||||  |||||||||||||||||| ||||    |||| |||| ||||||||||||||||||    
T  16377816 ttagaatatcaatgcaacattttttt---tttcactattatacttttatttattgaatttcatccaacttaattaactactccactaactacaattaata 16377720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 39785537 - 39785637
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttcac--tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||| || |||||| |  |||||| |  ||| ||||| |||||||||||| ||||| |||||||| |||| || |||||||||||||||||    
T  39785537 ttagaataccaatgcagcatttactattttttcccattataatacccttatttattgaacttcatccaacttaactactccattaactacaattaataag 39785636  T
Q  99 a 99  Q
    |    
T  39785637 a 39785637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 12520992 - 12520936
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 84  Q
    ||||||| |||||||||||| |||||||||||| ||||||||||| || ||||||||    
T  12520992 tttttcattattataccattttttattgaattttattcaacttaactatttcactaa 12520936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 45235535 - 45235632
Alignment:
Q  5 aataccaatacaacatttatt----tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| |||||||||||    | ||||||| || |||| | ||||||||||||||||||  ||||||| || |||| |||||||||||||||||    
T  45235535 aataccaatgcaacatttattattatttttttcattactatatccttatttattgaatttcatcaaacttaactatttcattaactacaattaataag 45235632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 17346476 - 17346425
Alignment:
Q  46 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||||||||||| | |||||||| |||| |||||||||||||||||||    
T  17346476 ttatttattgaatttcttccaacttaactactccactaactacaattaataa 17346425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 26608275 - 26608204
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||||| ||||||||| ||||||| | | ||||||||||||||| || | ||||||||| |||||||||||    
T  26608275 tttttcattattatacccttatttaattattttcattcaacttaactaatccactaactataattaataaga 26608204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 34120594 - 34120500
Alignment:
Q  5 aataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||| || ||||||||  |||||  || ||||||||  ||| |||||||||||||| |||||||| || | |||||||||||||||||||    
T  34120594 aataccaatgcagcatttattatttttttccattattatactcttacttattgaatttcatccaacttaactattccactaactacaattaataa 34120500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 18202104 - 18202157
Alignment:
Q  46 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||||||| |||||||| |||||||| |||||||||||||||| |||| ||||    
T  18202104 ttatttattaaatttcatccaacttaactacttcactaactacatttaacaaga 18202157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 25637432 - 25637531
Alignment:
Q  1 ttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||||| || ||||||||  |||||   || ||||| ||| ||||||||| |||||||| |||||||| |||| |  ||||||||||||||||    
T  25637432 ttagaataccaatgcagcatttattattttttttccattattacacccttatttattaaatttcatccaacttaactactcctataactacaattaataa 25637531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 31448812 - 31448755
Alignment:
Q  41 taccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||| |||||||||||||||||| |||||||| || |||||||||| |||||| ||||    
T  31448812 tacccttatttattgaatttcatccaacttaactatttcactaactgcaattagtaag 31448755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 43699736 - 43699672
Alignment:
Q  19 atttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 84  Q
    ||||||||||||| |||||||||||| || |||||||||||| || |||||||| |||| ||||||    
T  43699736 atttatttatttt-cactattatacccttgtttattgaattttatccaacttaattactccactaa 43699672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 25904769 - 25904813
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaa 72  Q
    |||| |||||||||||| | |||||||||||||||||||||||||    
T  25904769 ttttccactattataccctaatttattgaatttcattcaacttaa 25904813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 16028296 - 16028351
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 83  Q
    ||||||||||||||||  ||||||||||||||||| || |||||| ||||| ||||    
T  16028296 tttttcactattatacatttatttattgaatttcactccacttaactactttacta 16028351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 18853333 - 18853262
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||||||||| | || | |||||||||||||||||| ||| |||| ||||  ||||||||||| ||||||||    
T  18853333 tttttcactaatgtatccttatttattgaatttcatccaaattaattactctactaactacaactaataaga 18853262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 39329795 - 39329725
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||| ||||||| || | |||||||||||||||||| ||| |||| |||| || ||||||||||||||||||    
T  39329795 ttttccactattgtatcgttatttattgaatttcatccaatttaactactcca-taactacaattaataaga 39329725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 11742648 - 11742590
Alignment:
Q  40 ataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||| |||||||||||| |||||  ||||||| |||| || |||||||||||||||||    
T  11742648 atacccttatttattgaacttcatcaaacttaactactccattaactacaattaataag 11742590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 32831296 - 32831238
Alignment:
Q  39 tataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||||||||||||||||||||   | |||| |||| || ||||||||||||||||    
T  32831296 tataccattatttattgaatttcatctcatttaactactccaataactacaattaataa 32831238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 34451493 - 34451400
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaat 95  Q
    |||||||| |||| ||||||||| || |||  || |||||| || |||||||||||||||||| ||||| || || |||| |||||| |||||||    
T  34451493 ttagaatatcaatgcaacatttaatt-tttcccagtattatgcctttatttattgaatttcatccaactaaactatttcaataactagaattaat 34451400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 28170715 - 28170646
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||||||||  |||||||| ||||||||| ||| |||| || |  | ||||||||||||||||    
T  28170715 tttttcactattatactcttatttatagaatttcatccaatttaattattctattaactacaattaataa 28170646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 28186213 - 28186265
Alignment:
Q  46 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||||||||||||||||| ||||   ||||||| ||| ||||||    
T  28186213 ttatttattgaatttcattcaacttaactactctgctaactaaaatgaataag 28186265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 2e-42; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 7920193 - 7920292
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataagat 100  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7920193 ttagaatatcaatgcaacatttatttatttttcactattataccattatttattgaatttcattcaaattaaatacttcactaactacaattaataagat 7920292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 31894366 - 31894274
Alignment:
Q  5 aataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||| |||| |||||||||||  ||||||||||||||||| ||||||||| |||||||| |||||||| ||||||||||||||||||||||||    
T  31894366 aatatcaatgcaacatttattattttttcactattatacccttatttattaaatttcatccaacttaactacttcactaactacaattaataa 31894274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 15058074 - 15058168
Alignment:
Q  5 aataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||| || |||||||||||  |||||  ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15058074 aataccgatgcaacatttattattttttgtactattatacccttatttattgaatttcatccaacttaaatacttcactaactacaattaataag 15058168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 181517 - 181606
Alignment:
Q  10 caatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||| |||||||||||  ||||||||||||||||||| |||||||||||||||||| |||||||| |||| ||||||||| |||||||||    
T  181517 caatgcaacatttattattatttttcactattatacccttatttattgaatttcatccaacttaactactccactaactataattaataa 181606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 34657701 - 34657626
Alignment:
Q  22 tatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||| |||| |||||||||||  |||||||||||||||||| |||||||| |||| |||||||||||||||||||    
T  34657701 tattttttttccactattatacatttatttattgaatttcatccaacttaactactccactaactacaattaataa 34657626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 11143748 - 11143650
Alignment:
Q  1 ttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||| ||||||| || |||||||| | ||||||| ||| ||||| |||||||||||| ||||| |||||||| |||||||||||||| ||||||||||    
T  11143748 ttagactaccaatgcagcatttattatttttttcattataatacccttatttattgaacttcatccaacttaactacttcactaactataattaataag 11143650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 3720369 - 3720303
Alignment:
Q  33 cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||||||||||  ||||||| ||||||||||||||||||| || | |||||||||||||||||||||    
T  3720369 cactattatactcttatttactgaatttcattcaacttaactattccactaactacaattaataaga 3720303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 11656071 - 11656009
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| |||||||||||||||||| |||||| | |||| ||||||||||||||||||||    
T  11656071 tattatacccttatttattgaatttcatccaactttactactccactaactacaattaataag 11656009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 13087511 - 13087581
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||| |||||||   |||||||||||||||||| |||||||| |||||||||||||| ||||||||||    
T  13087511 tttttcattattatattcttatttattgaatttcatccaacttaattacttcactaactataattaataag 13087581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 15582237 - 15582326
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaa 90  Q
    |||||||| |||| ||| | |||||  ||||||||||| ||| | ||||||||||||||||||| |||||||  ||||||||||||||||    
T  15582237 ttagaatatcaatgcaataattattattttttcactatcatatccttatttattgaatttcattaaacttaaccacttcactaactacaa 15582326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 24983577 - 24983512
Alignment:
Q  33 cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||| |||||| |||||||||||||||||  |||||||| |||| ||||||||||||||||||||    
T  24983577 cactaatatacccttatttattgaatttcacccaacttaactactccactaactacaattaataag 24983512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 4367417 - 4367316
Alignment:
Q  1 ttagaataccaatacaacatttatt----tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaata 96  Q
    |||||||| ||||||| ||||||||    | ||||||  |||||| || ||||||||| |||||||| |||||||| |||||||||||||||| ||||||    
T  4367417 ttagaataacaatacatcatttattattatttttttctttattattcccttatttattaaatttcatgcaacttaactacttcactaactacagttaata 4367318  T
Q  97 ag 98  Q
    ||    
T  4367317 ag 4367316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 3291883 - 3291832
Alignment:
Q  46 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||||||| || |||||||| ||||||||||||||||||||||||    
T  3291883 ttatttattgaattttatccaacttaactacttcactaactacaattaataa 3291832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 34299946 - 34300046
Alignment:
Q  1 ttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||| ||||||||||||||||  ||| |   ||||| |||| | |||||||||||||  ||| |||||||| |||||||||||| |||||||||||    
T  34299946 ttagaatatcaatacaacatttattattttctttccactaatatatccttatttattgaataccatccaacttaactacttcactaaccacaattaataa 34300045  T
Q  98 g 98  Q
    |    
T  34300046 g 34300046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 1781790 - 1781853
Alignment:
Q  33 cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||||||| || |||||||||||||||||||||| || ||| ||||||||||||||||||||    
T  1781790 cactattataccttt-tttattgaatttcattcaactt-aacactccactaactacaattaataag 1781853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 6801905 - 6801982
Alignment:
Q  21 ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||| |||| || ||| ||||| |||||||| ||| ||||| |||||||| |||| ||||||||||||||||||||    
T  6801905 ttattttttttccattataatacccttatttatcgaacttcatccaacttaactactccactaactacaattaataag 6801982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 13909398 - 13909475
Alignment:
Q  21 ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||| ||| ||| ||||||||  ||||||||| ||||||||  ||||||| |||| ||||||||||||||||||||    
T  13909398 ttatttttttctcattattatactcttatttattcaatttcatctaacttaattactccactaactacaattaataag 13909475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 15046111 - 15046171
Alignment:
Q  34 actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaat 95  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||| |||||||||||||||||    
T  15046111 actattatacccttatttattgaatttcatccaac-taactactccactaactacaattaat 15046171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 22398412 - 22398465
Alignment:
Q  46 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||||||||||||||||  ||||||| ||||||| ||||||||||||||||||    
T  22398412 ttatttattgaatttcatctaacttaactacttcaataactacaattaataaga 22398465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 28106062 - 28106013
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatact 77  Q
    |||| |||||||||| ||||||||||||||||||||||||||||| ||||    
T  28106062 ttttccactattatatcattatttattgaatttcattcaacttaactact 28106013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 29363258 - 29363357
Alignment:
Q  3 agaataccaatacaacatttatt--tattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||| || ||||||||  |||||||  || ||||||||  |||||||||||||||||| |||||||| || | | ||||||||||||||||||    
T  29363258 agaataccaatgcagcatttattattattttttccattattatactcttatttattgaatttcatccaacttaactaatccgctaactacaattaataag 29363357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 16205291 - 16205219
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataagat 100  Q
    ||||||||| || |||  ||||||||||| ||||||  |||||||||| | ||||||||||||||||||||||    
T  16205291 tttttcactgttgtacacttatttattgagtttcatctaacttaaatattccactaactacaattaataagat 16205219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 97
Target Start/End: Original strand, 17828939 - 17828990
Alignment:
Q  46 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||| ||| |||||||| |||||||| ||||||||||||||||||||||||    
T  17828939 ttattaattaaatttcatccaacttaattacttcactaactacaattaataa 17828990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 1224962 - 1225038
Alignment:
Q  15 caacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaatta 93  Q
    |||||||||||| ||||||||||||||||| ||||||||| ||||| || |||||||| | ||| |||||||| |||||    
T  1224962 caacatttattt-tttttcactattatacccttatttattcaattt-atccaacttaacttcttaactaactaaaatta 1225038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 30716851 - 30716951
Alignment:
Q  1 ttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||| | |||||||||||  |||||   || ||| ||||  ||||||||||||||| || |||||| | |||| |||||||||||||||||||    
T  30716851 ttagaataccagtgcaacatttattattttttttccattataatactcttatttattgaattttatccaactttactactccactaactacaattaataa 30716950  T
Q  98 g 98  Q
    |    
T  30716951 g 30716951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 1063727 - 1063671
Alignment:
Q  37 attataccattatttattgaatttcattcaacttaaatacttcactaactacaatta 93  Q
    |||||||| ||| ||||| ||||||||| ||||||| |||| |||||||||||||||    
T  1063727 attatacccttacttattaaatttcatttaacttaactactccactaactacaatta 1063671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 5302303 - 5302402
Alignment:
Q  1 ttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| ||| || ||||||||  |||||  || ||| |||||  ||||||||||| ||||| |||||||| |||| || |||||||||||||||||    
T  5302303 ttagaatactaatgcagcatttattatttttttccattataatacccgtatttattgaacttcatccaacttaactactccattaactacaattaataag 5302402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 21425717 - 21425635
Alignment:
Q  5 aataccaatacaacatttatt--tattttt--cactattataccattatttattgaatttcattcaacttaaatacttcacta 83  Q
    |||| |||| |||||||||||  |||||||  ||| |||||| | |||||||||||||||||| |||||||| ||||||||||    
T  21425717 aatatcaatgcaacatttattattattttttccaccattatatccttatttattgaatttcatccaacttaactacttcacta 21425635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 1225037 - 1225099
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||||||| ||||||||| ||||| || |||||||| | |||||||||||| |||||||||||    
T  1225037 tattatacccttatttattcaattt-atccaacttaacttcttcactaactaaaattaataaga 1225099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 1956118 - 1956041
Alignment:
Q  21 ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||||| ||| ||| ||||||||| ||||||||||||||| ||  |||  |  ||||||||||||||||||||||||||    
T  1956118 ttatttttttctcattattatacc-ttatttattgaattttatcgaacacagctacttcactaactacaattaataaga 1956041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 13206954 - 13206896
Alignment:
Q  39 tataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||| |||||||||||||| || |||| ||||  ||| |||||||||||||||||||    
T  13206954 tatacccttatttattgaattacactcaatttaacaactccactaactacaattaataa 13206896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 1517242 - 1517299
Alignment:
Q  6 ataccaatacaacatttatttatttttcactattataccattatttattgaatttcat 63  Q
    |||||||| |||||||||||  |||||||||| ||||   ||||||||||||||||||    
T  1517242 ataccaatgcaacatttattattttttcactaatatatttttatttattgaatttcat 1517299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 1519329 - 1519386
Alignment:
Q  6 ataccaatacaacatttatttatttttcactattataccattatttattgaatttcat 63  Q
    |||||||| |||||||||||  |||||||||| ||||   ||||||||||||||||||    
T  1519329 ataccaatgcaacatttattattttttcactaatatatttttatttattgaatttcat 1519386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 17835338 - 17835434
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttcac-tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||||| |||||||| ||  ||||||   ||||||||||||||| || |||| |||| |||||||| ||||  || |||||||||||||||    
T  17835338 ttagaataccaatgcaacatttgttattttttcctatattataccattattaat-gaatatcatccaacttaactactaaacaaactacaattaataa 17835434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 32440781 - 32440708
Alignment:
Q  25 ttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||| || |||| |||| |||||||||  ||||||| |||||||| ||||  ||||| |||||||||||||    
T  32440781 ttattttccattattgtacctttatttattacatttcatccaacttaactactctactaattacaattaataag 32440708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 33510117 - 33510190
Alignment:
Q  24 tttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||| | ||||||||| ||||||| | |||||||| |||||||| ||||  | ||| ||||||||||||    
T  33510117 tttattttttattattatacccttatttaataaatttcatccaacttaactactcaattaattacaattaataa 33510190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 8695006 - 8695097
Alignment:
Q  10 caatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||| |||||||||||  |||||| ||||| ||||   |||||||| |||||||| |  | ||||  |||||||||||||||||||||||||    
T  8695006 caatgcaacatttattattattttccactagtatattcttatttatagaatttcacttcatttaaccacttcactaactacaattaataaga 8695097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 21010162 - 21010210
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaa 84  Q
    ||||||||  |||||||||||||||||| |||||||| |||| ||||||    
T  21010162 tattatactgttatttattgaatttcatccaacttaactactccactaa 21010210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 114 - 227
Target Start/End: Complemental strand, 143199 - 143086
Alignment:
Q  114 gcgacaaaagtttcacgaatatcacacgagaaaagctcaaaagcggtgatttccttgttttatctctttttggttataccatttatctctccccttgttt 213  Q
    |||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  143199 gcgacaaaagtttcacgaatatcatatgagaaaagttcaaaagcggtgatttccttgttttatctctttttggtcataccatttatctcttcccttgttt 143100  T
Q  214 caaactgttccact 227  Q
    | | ||||||||||    
T  143099 ccagctgttccact 143086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 6e-27; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 114 - 195
Target Start/End: Original strand, 1814041 - 1814122
Alignment:
Q  114 gcgacaaaagtttcacgaatatcacacgagaaaagctcaaaagcggtgatttccttgttttatctctttttggttataccat 195  Q
    ||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||| |||||||||| |||||||    
T  1814041 gcgacaaaagtttcacgaatatcacacgagaaaagtttaaaaacggtgatttccttgttttatttctttttggtcataccat 1814122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 16821501 - 16821401
Alignment:
Q  1 ttagaataccaatacaacatttatt--tattttt-cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||||| || ||||||||  ||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  16821501 ttagaataccaatgcagcatttattattatttttgcactattatacccttatttattgaatttcattcaacttaaatactccactaactataattaataa 16821402  T
Q  98 g 98  Q
    |    
T  16821401 g 16821401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 50264226 - 50264149
Alignment:
Q  22 tatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||| |||| || ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  50264226 tattttttttccattattatacccttatttattgaatttcattcaacttaaatatttcactaactacaattaataaga 50264149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 7061829 - 7061735
Alignment:
Q  5 aataccaatacaacatttatttatt--tttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||| ||||||||||||||||  ||  ||||||||||||||| ||||||||||||||||||||||||||| || | |||||||||||||||||||    
T  7061829 aatatcaatacaacatttattatttattttcactattatacccttatttattgaatttcattcaacttaattaatccactaactacaattaataa 7061735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 34360611 - 34360707
Alignment:
Q  5 aataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||||||||  ||||||| ||| |||||  |||||||||||| ||||||||||||||| ||||||||||| |||| |||||||||||||||||||||    
T  34360611 aataccaatttaacattttttttttttttccactattatacccttatttattgaattttattcaacttaactactccactaactacaattaataaga 34360707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 35311390 - 35311292
Alignment:
Q  5 aataccaatacaacatttatt--tattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||||||| |||||||||||  |||||||  || ||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||||||    
T  35311390 aataccaatgcaacatttattattattttttccaatattatacctttatttattgaatttcatccaacttaattactccactaactacaattaataaga 35311292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 17237436 - 17237366
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||| |||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  17237436 ttttccactattatacccttatttattgaatttcatccaacttaactactccactaactacaattaataag 17237366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 21240869 - 21240774
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||| |||| ||||||||||  ||||| || ||||||||| |||||||||||||||||| |||||||| ||||  |||||||||||||||||||    
T  21240869 ttagaatatcaatgcaacatttat--attttccattattatacccttatttattgaatttcatccaacttaactactcaactaactacaattaataag 21240774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 22129998 - 22130094
Alignment:
Q  5 aataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| |||||||||||  |||||   || ||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  22129998 aataccaatgcaacatttattattttttttccattattatacctttatttattgaatttcatccaacttaattactccactaactacaattaataag 22130094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 47464512 - 47464434
Alignment:
Q  21 ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||||| |||| |||||||||||| |||||||||||||||||| |||||||| |||| ||| |||||||||||||||||    
T  47464512 ttattttttttccactattatacccttatttattgaatttcatccaacttaactactccaccaactacaattaataaga 47464434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 26147787 - 26147684
Alignment:
Q  1 ttagaataccaatacaacatttattt-attttt---cactattataccattatttattgaat-ttcattcaacttaaatacttcactaactacaattaat 95  Q
    |||||||||||||||||||||||||| ||||||   || ||||||||| ||||||||||||  ||||| |||||||| |||| |||||||||||||||||    
T  26147787 ttagaataccaatacaacatttattttatttttttccattattatacccttatttattgaaaattcatccaacttaattactccactaactacaattaat 26147688  T
Q  96 aaga 99  Q
    ||||    
T  26147687 aaga 26147684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 43237224 - 43237293
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||||||||  |||||||||||||||||| |||||||| |||||||||||||| |||||||||    
T  43237224 tttttcactattatacacttatttattgaatttcatccaacttaactacttcactaactataattaataa 43237293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 6643811 - 6643731
Alignment:
Q  18 catttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||| |||||||| ||   |||||||||||||||||||    
T  6643811 catttatttatttttccactattatacccttatttattgaatttcatccaacttaactataccactaactacaattaataa 6643731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 42617072 - 42616974
Alignment:
Q  1 ttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||| ||| |||||||||||  |||||| || ||||||||  |||||||||||||||||||| |||||| |||| |||| ||||||||||||||    
T  42617072 ttagaatacaaatgcaacatttattattattttccattattatacacttatttattgaatttcattcgacttaactactccacttactacaattaataa 42616974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 49428502 - 49428412
Alignment:
Q  10 caatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||| |||||||||||  |||||  || ||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  49428502 caatgcaacatttattacttttttccattattatacccttatttattgaatttcatccaacttaattactccactaactacaattaataag 49428412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 33790863 - 33790801
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  33790863 tattatacccttatttattgaatttcatccaacttaactactccactaactacaattaataag 33790801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 38405272 - 38405172
Alignment:
Q  1 ttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||| |||| |||||||||||  |||||   || ||||||||| |||||||||||||||||| |||||||| |||  |||||||||||||||||||    
T  38405272 ttagaatagcaatgcaacatttattactttttttccattattatacctttatttattgaatttcatccaacttaactacaccactaactacaattaataa 38405173  T
Q  98 g 98  Q
    |    
T  38405172 g 38405172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 49176104 - 49176004
Alignment:
Q  1 ttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||||| ||||| |||||  |||||   |||||||||||| ||||||||||||||| || |||||||| |||| | |||||||||||||||||    
T  49176104 ttagaataccaatgcaacaattattatttttttcccactattatacccttatttattgaattttatccaacttaactactccgctaactacaattaataa 49176005  T
Q  98 g 98  Q
    |    
T  49176004 g 49176004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 2066743 - 2066840
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||||||||  | ||||||||  ||||||| ||||||||| ||||||||||||||||||  ||||||| |||  ||||||||| ||||||||||    
T  2066743 ttagaataccaatgaagcatttattattttttcattattatacctttatttattgaatttcatctaacttaactaccccactaactaaaattaataag 2066840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 5841597 - 5841497
Alignment:
Q  1 ttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaa-tacttcactaactacaattaataa 97  Q
    |||||||| |||| || ||||||||  || ||| || ||||||||| |||||||||||||||||| ||||||||| |||| |||||||||||||||||||    
T  5841597 ttagaatatcaatgcatcatttattattaatttccattattatacctttatttattgaatttcatccaacttaaactactccactaactacaattaataa 5841498  T
Q  98 g 98  Q
    |    
T  5841497 g 5841497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 25233134 - 25233230
Alignment:
Q  1 ttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaata 96  Q
    |||||||| |||| ||||||||||| | ||||||| ||| ||| | |||||||||||| ||||| |||||||| |||||||||||||| ||||||||    
T  25233134 ttagaatatcaatgcaacatttattatttttttcattataatatctttatttattgaacttcatccaacttaactacttcactaactataattaata 25233230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 32884777 - 32884853
Alignment:
Q  23 atttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||| |||| |||||||||| | |||||||||||||| ||| |||||||| |||| |||||||||||||||||||||    
T  32884777 attttttttccactattatatccttatttattgaattccatccaacttaactactccactaactacaattaataaga 32884853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 47773188 - 47773089
Alignment:
Q  1 ttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||| || ||||||||  |||||  || ||| ||||| |||||||||||| ||||| |||||||| |||| ||||||||||||||||||||    
T  47773188 ttagaataccaatgcagcatttattatttttttccattataatacccttatttattgaacttcatccaacttaactactccactaactacaattaataag 47773089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 43902221 - 43902303
Alignment:
Q  16 aacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||||| |||||||| ||||||||| || |||||||||||||||||| |||||||| |||| |||||||||  ||||||||||    
T  43902221 aacatttttttatttt-cactattatgcccttatttattgaatttcatgcaacttaattactccactaactatgattaataaga 43902303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 35251851 - 35251936
Alignment:
Q  1 ttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 84  Q
    |||||||||||| ||||||||||||  ||||||||| ||||||| | ||||||||||||||||||  ||||||| |||| ||||||    
T  35251851 ttagaataccaaaacaacatttattattatttttcattattatatccttatttattgaatttcatctaacttaattactccactaa 35251936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 49746916 - 49747009
Alignment:
Q  5 aataccaatacaacatttatt--tatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaat 95  Q
    ||||||||| |||||||||||  |||||||| | ||||||||| |||||||||||||||||| |||||||| ||||  |||||||| |||||||    
T  49746916 aataccaatgcaacatttattattatttttccattattatacccttatttattgaatttcatccaacttaactactcaactaactataattaat 49747009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 35380499 - 35380404
Alignment:
Q  5 aataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||| |||||||||||  |||||   || ||||||||  |||||||||||||||||| ||||||||  ||| |||||||||||||||||||    
T  35380499 aataccaatgcaacatttattattttttttccattattatactcttatttattgaatttcatccaacttaaccactccactaactacaattaataa 35380404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 47359089 - 47359020
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||| |||||||  ||| ||||||||||||||||||||||||||| |||| |||| ||||||||||||||    
T  47359089 ttttccactattgcacccttatttattgaatttcattcaacttaattactccactgactacaattaataa 47359020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 51624767 - 51624836
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||| |||||| ||||| |||||||||||||||||| |||||||| |||| |||||||||||| ||||||    
T  51624767 ttttccactatcatacccttatttattgaatttcatccaacttaactactccactaactacaaataataa 51624836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 52247559 - 52247498
Alignment:
Q  37 attataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||  ||||||| ||||||||||||||||||| |||| ||||||||||||||||||||    
T  52247559 attatacacttatttaatgaatttcattcaacttaactactccactaactacaattaataag 52247498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 53412059 - 53412158
Alignment:
Q  1 ttagaataccaatacaacat---ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||||||||  |||||   |||||| ||||||||||||||||  |||||||||||||||||| |||||||| || | ||| ||||| |||||||||    
T  53412059 ttagaataccaatgtaacatctattatttttttttcactattatacttttatttattgaatttcatccaacttaactattccacaaactataattaataa 53412158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 48914278 - 48914218
Alignment:
Q  38 ttataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||| | ||||||||||||||||| ||||||| ||||||||||||||||| |||||||    
T  48914278 ttataccctaatttattgaatttcattaaacttaattacttcactaactacaaataataag 48914218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 52859963 - 52859869
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttcac--tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||| |||||||||||  |||||| |  ||||||||| |     ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  52859963 ttagaataccaatgcaacatttattattttttcccattattataccct-----attgaatttcattcaacttaactactccactaactacaattaataag 52859869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 10754330 - 10754423
Alignment:
Q  5 aataccaatacaacatttatttatttttc--actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||| ||||| ||||| |||||||  || |||||||  ||||||||| ||||||||||||||||| || | |||||||||||||||||||    
T  10754330 aataccaatgcaacaattatt-atttttccaaccattatactcttatttattaaatttcattcaacttaattattccactaactacaattaataa 10754423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 10968099 - 10968192
Alignment:
Q  5 aataccaatacaacatttatttatttttc--actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||| ||||| ||||| |||||||  || |||||||  ||||||||| ||||||||||||||||| || | |||||||||||||||||||    
T  10968099 aataccaatgcaacaattatt-atttttccaaccattatactcttatttattaaatttcattcaacttaattattccactaactacaattaataa 10968192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 31370464 - 31370373
Alignment:
Q  5 aataccaatacaacatttatttattttt-cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaat 95  Q
    |||| ||||||||||||||||  ||||| || ||||||||  ||||||||||| |||||| |||||||| |||| ||||||||| |||||||    
T  31370464 aataacaatacaacatttattattttttgcattattatacatttatttattgattttcatccaacttaactactccactaactataattaat 31370373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 2942784 - 2942714
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||| |||||||||| | || ||||||||| ||||||||||||||  ||| ||||||||||||||||||||    
T  2942784 ttttccactattatatctttgtttattgaaattcattcaacttaaccactccactaactacaattaataag 2942714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 19265797 - 19265859
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||| ||| ||| ||||||||||||||||||||||| |||| ||||||||| ||||||||||    
T  19265797 tattacacccttaattattgaatttcattcaacttaactactccactaactataattaataag 19265859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 2653372 - 2653472
Alignment:
Q  1 ttagaataccaatacaacatttatt-tatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||| |||| ||||||||||| | |||||| | ||||||||| ||||||||| |||||||| ||| |||| |||| |  |||||||||||||||||    
T  2653372 ttagaatatcaatgcaacatttattatctttttccattattatacctttatttattaaatttcatccaatttaactactcctttaactacaattaataag 2653471  T
Q  99 a 99  Q
    |    
T  2653472 a 2653472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 11907768 - 11907669
Alignment:
Q  1 ttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||| || ||||||||  |||||  || ||| ||||  |||||||||||| ||||| |||||||| |||| || |||||||||||||||||    
T  11907768 ttagaataccaatgcagcatttattatttttttccattataatacatttatttattgaacttcatccaacttaactactccaataactacaattaataag 11907669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 36985767 - 36985835
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaata 96  Q
    |||| ||| |||||||| |||||||||||||||||| |||||||| || |  |||||||||||||||||    
T  36985767 ttttccaccattatacccttatttattgaatttcatccaacttaattattctactaactacaattaata 36985835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 18741596 - 18741545
Alignment:
Q  46 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||||||||||||| |||||||| |||| || ||||||||||||||||    
T  18741596 ttatttattgaatttcatccaacttaactactccattaactacaattaataa 18741545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 461947 - 462009
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| |||||| |||||||| ||||||||||| |||| | |||| |||||||||||||    
T  461947 tattatacccttatttgttgaattttattcaacttaactactccgctaattacaattaataag 462009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 11288751 - 11288697
Alignment:
Q  46 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataagat 100  Q
    ||||||||||||||| || |||||||| |||| ||| ||||||||||||||||||    
T  11288751 ttatttattgaattttatccaacttaactactccaccaactacaattaataagat 11288697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 25142527 - 25142449
Alignment:
Q  20 tttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||| ||||| | | ||||| | |||||||||||||||||| |||||||| ||| ||||||||| |||| ||||||    
T  25142527 tttattttttttttattgttatatccttatttattgaatttcatccaacttaactacatcactaactgcaatcaataag 25142449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 28501054 - 28500979
Alignment:
Q  1 ttagaataccaatacaacatttatttattttt----cactattataccattatttattgaatttcattcaacttaa 72  Q
    |||||||||||||||||||||||||  |||||    || ||||||||| ||||||||||||||||||  |||||||    
T  28501054 ttagaataccaatacaacatttattattttttttcccattattatacccttatttattgaatttcatcaaacttaa 28500979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 30260972 - 30261058
Alignment:
Q  15 caacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataagatg 101  Q
    |||||||||| | |||||| ||| ||||   ||||||||||||||||| || |||||| ||||  ||||| ||||||||||||||||    
T  30260972 caacatttatctttttttctctaatatagtcttatttattgaatttcactctacttaactactctactaattacaattaataagatg 30261058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 30682336 - 30682266
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||| |||||| |  |||||||||||||||||||||| |||| ||||  ||||||||||| |||||||    
T  30682336 tttttcattattatgcttttatttattgaatttcattcaaattaactactctactaactacaactaataag 30682266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 44536335 - 44536266
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||| |||||||||||| |||||| |||||||||||  ||||||  |||| ||||||||||||||||||||    
T  44536335 ttttccactattatacccttattt-ttgaatttcatctaacttagctactccactaactacaattaataag 44536266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 35998793 - 35998861
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||||||| | |||||||||||| ||||| |||||||| |||| ||  |||||||||||||||    
T  35998793 tttttcactattatatctttatttattgaa-ttcatccaacttaactactccatcaactacaattaataa 35998861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 54506754 - 54506838
Alignment:
Q  15 caacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||||||  ||||||||| |||||||   ||||| ||||||||||||  ||||||| |||| |||||||||||||| ||||    
T  54506754 caacatttattattatttttcattattatattcttattaattgaatttcatcaaacttaactactccactaactacaattgataa 54506838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 6609735 - 6609811
Alignment:
Q  21 ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||| |||| || ||||||||  ||||||||||| |||||| |||||||| |||| || ||| ||||||||||||    
T  6609735 ttattttttttccattattatactcttatttattgagtttcatccaacttaactactccaataattacaattaataa 6609811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 17121200 - 17121259
Alignment:
Q  5 aataccaatacaacatttatt--tatttttcactattataccattatttattgaatttca 62  Q
    ||||||||| |||||||||||  ||||||||||||  |||||||||||||||| ||||||    
T  17121200 aataccaatgcaacatttattattatttttcactaacataccattatttattgcatttca 17121259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 18532157 - 18532229
Alignment:
Q  25 ttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||||||||||||| ||| |||||||||||||||| | | ||||  ||| |||| |||| |||||||||    
T  18532157 ttatttttcactattatatcataatttattgaatttcatcctagttaaccactccacttactataattaataa 18532229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 53346746 - 53346810
Alignment:
Q  34 actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||   |||||||||||||||||  ||||||| |||| ||||||||| ||||||||||    
T  53346746 actattatactcatatttattgaatttcatcaaacttaactactccactaactaaaattaataag 53346810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 54202162 - 54202246
Alignment:
Q  14 acaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||||  |||||| ||| |||||   |||||||||||||||||| | ||| || ||||||||||| ||||||||||||    
T  54202162 acaacatttattattttttctactgttatattcttatttattgaatttcatcccactcaattacttcactaattacaattaataa 54202246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 4972529 - 4972588
Alignment:
Q  5 aataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcat 63  Q
    |||||||||  |||||||||| | ||||||||||||||||  ||||||||||||||||||    
T  4972529 aataccaatgtaacatttattatttttttcactattatacacttatttattgaatttcat 4972588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 49579300 - 49579249
Alignment:
Q  46 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||||||||||||| ||||||||  | |||| ||||||||||||||||    
T  49579300 ttatttattgaatttcatccaacttaacaatttcaataactacaattaataa 49579249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 4739520 - 4739435
Alignment:
Q  15 caacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||||||  |||||||||||| |||||| ||||| ||| ||||  | || |||||| |||| ||||||||||||||| ||||    
T  4739520 caacatttattattatttttcactaatatacccttattaatttaattataatccacttaattactccactaactacaattattaag 4739435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 5618504 - 5618570
Alignment:
Q  5 aataccaatacaacatttatttattttt-cactattataccattatttattgaatttcattcaactt 70  Q
    |||| |||| || ||||||||||||||| || ||||||| | || ||||||||||||||||||||||    
T  5618504 aatatcaatgcagcatttatttattttttcattattataactttttttattgaatttcattcaactt 5618570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 17114433 - 17114491
Alignment:
Q  40 ataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||| |||||||||||| ||| | ||| |||| |||| ||||||||||||||||||||    
T  17114433 atacctttatttattgaacttcctccaaattaactactccactaactacaattaataag 17114491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 19627169 - 19627115
Alignment:
Q  10 caatacaacatttatt-tatttttcactattataccattatttattgaatttcat 63  Q
    |||||||||||| ||| | ||||||||||||||| | ||||||||||||||||||    
T  19627169 caatacaacattaattatttttttcactattatatctttatttattgaatttcat 19627115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 20612300 - 20612242
Alignment:
Q  39 tataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||| |||||||||||||||||| |  |||||| ||||||| || |||||||||||||    
T  20612300 tatactattatttattgaatttcaattcacttaactacttcattatctacaattaataa 20612242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 40123020 - 40122924
Alignment:
Q  5 aataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| |||||||||||  |||||   ||| ||| |||| |||||||||||||||| |  ||||||| | || ||||||||||||| ||||||    
T  40123020 aataccaatgcaacatttattatttttttcccaccattgtacccttatttattgaatttcgtcgaacttaactgctccactaactacaatcaataag 40122924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 10672643 - 10672704
Alignment:
Q  37 attataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||  |||||||||||||||||| |||||||| || |||| | |||| ||||||||||    
T  10672643 attatactcttatttattgaatttcatccaacttaactatttcattgactaaaattaataag 10672704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 10886283 - 10886344
Alignment:
Q  37 attataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||  |||||||||||||||||| |||||||| || |||| | |||| ||||||||||    
T  10886283 attatactcttatttattgaatttcatccaacttaactatttcattgactaaaattaataag 10886344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 44526378 - 44526430
Alignment:
Q  46 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| |||||||| |||||| | || | ||||||||||||||||||||    
T  44526378 ttatttattaaatttcatccaacttcactattccactaactacaattaataag 44526430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 2e-26; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 22771999 - 22771900
Alignment:
Q  1 ttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||| |||||||||||  || |||||| ||||||||| |||||||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  22771999 ttagaataccaatgcaacatttattattacttttcattattatacccttatttattgaatttcatccaacataattacttcactaactacaattaataag 22771900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 41091949 - 41092046
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||||||| |||| || ||||||||||||||||||||||||||| |||||||||||||| || | |||||||||| ||  |||||||||||||||||||    
T  41091949 ttagaatatcaatgcagcatttatttatttttcactattatacccttatttattgaattaca-taaacttaaatatttttctaactacaattaataaga 41092046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 45425808 - 45425730
Alignment:
Q  21 ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||||| |||| |||||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||||||    
T  45425808 ttattttttttccactattatacccttatttattgaatttcatacaacttaattactccactaactacaattaataaga 45425730  T

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Target: chr8; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 7172895 - 7172964
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||| |||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  7172895 ttttccactattatacccttatttattgaatttcattcaacttaactacttcattaactacaattaataa 7172964  T

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Target: chr8; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 10180111 - 10180012
Alignment:
Q  1 ttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||| |||||||||||  ||||||  | ||||||||  ||||| ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  10180111 ttagaataccaatgcaacatttattattattttctattattatacacttattaattgaatttcattcaacttaactactccactaactacaattaataag 10180012  T

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Target: chr8; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 21216260 - 21216166
Alignment:
Q  5 aataccaatacaacatttatttatttttc---actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| ||||||||||||||||||    ||||||||||||||  |||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  21216260 aataccaatgcaacatttatttatttttttctactattataccatt--ttattgaatttcatccaacttaactactccactaactacaattaataag 21216166  T

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Target: chr8; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 39405714 - 39405812
Alignment:
Q  1 ttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||| |||| || ||||||||  ||||||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||  |||||||||    
T  39405714 ttagaatatcaatgcagcatttattattatttttcactattatacccttatttatttaatttcattcaacttaattactccactaactgtaattaataa 39405812  T

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Target: chr8; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 34948849 - 34948753
Alignment:
Q  1 ttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||||| ||| ||||||| | ||||||| | ||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||||    
T  34948849 ttagaataccaatgcaatatttattatttttttcattgttatacc-ttatttattgaatttcatccaacttaactactccactaactacaattaataa 34948753  T

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Target: chr8; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 39301094 - 39301021
Alignment:
Q  25 ttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||| || ||||||||  |||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  39301094 ttattttccattattatacttttatttattgaatttcattcaactgaactacttcactaactacaattaataag 39301021  T

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Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 396775 - 396676
Alignment:
Q  1 ttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||| |||||||||||  ||||||||| ||||||||| ||||| ||||||||| || |||  ||| ||||||| |||||||||||||||||    
T  396775 ttagaataccaatgcaacatttattattatttttcattattatacccttattaattgaattttatccaatataactacttcattaactacaattaataag 396676  T

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Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 17823907 - 17823971
Alignment:
Q  33 cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||| |||||||||| |||||||| |||||||| ||||||||||||||||||||||||    
T  17823907 cactattatactattatttatttaatttcatccaacttaactacttcactaactacaattaataa 17823971  T

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Target: chr8; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 17719422 - 17719323
Alignment:
Q  1 ttagaataccaatacaacatttatt-tattttt-cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||| ||||||||||| | ||||| || ||||||||| ||||||||| |||||||| |||||||| |||| ||||||||| ||||||||||    
T  17719422 ttagaataccaatgcaacatttattatctttttccattattatacctttatttattaaatttcatccaacttaactactccactaactataattaataag 17719323  T

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Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 29226687 - 29226592
Alignment:
Q  5 aataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||| |||| || |||||||| ||||||||| |||| |||| ||||||||||||||||||  ||||||| |||| |||||||||||||||||||||    
T  29226687 aatatcaatgcagcatttattatatttttcattattgtacccttatttattgaatttcatctaacttaactactccactaactacaattaataaga 29226592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 44761629 - 44761559
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||| |||||||||||| | |||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  44761629 ttttccactattataccctcatttattgaatttcatccaacttaactactccactaactacaattaataag 44761559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 9300243 - 9300178
Alignment:
Q  33 cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||||| | ||||||||||||||||||||||||||| |||| ||||||||| ||||||||||    
T  9300243 cactattatatccttatttattgaatttcattcaacttaactactccactaactaaaattaataag 9300178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 14855069 - 14855000
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||| ||||||||||||||| |||||||||||||||||| | ||| |||| |||||||||||||||||||    
T  14855069 ttttccactattataccattctttattgaatttcattcagcctaactactccactaactacaattaataa 14855000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 4428513 - 4428417
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||| ||||  |||| |||||  |||| |||||||||||  ||||||||||||||||||  ||||||| || |||||||||||||||||||||    
T  4428513 ttagaatatcaatgtaacaattattatttttccactattatacttttatttattgaatttcatctaacttaactaattcactaactacaattaataa 4428417  T

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Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 10098156 - 10098056
Alignment:
Q  1 ttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||||||||||| ||||||||  |||||   || ||| ||| | |||||||||||| ||||| |||||||| |||| |||||||||||||||||||    
T  10098156 ttagaataccaatacatcatttattattttttttccattataatatctttatttattgaacttcatccaacttaactactccactaactacaattaataa 10098057  T
Q  98 g 98  Q
    |    
T  10098056 g 10098056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 31270975 - 31271073
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||||||| ||| ||| |||||||  ||||| | || |||||| ||||||||||||||| || |||||||| |||| ||||||||| |||||||||||    
T  31270975 ttagaatactaatgcaatatttattatttttttattactatacccttatttattgaattttatccaacttaactactccactaactataattaataaga 31271073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 32476268 - 32476338
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||| | ||||||| ||||||||||||||||||  ||||||| ||||||| |||||||||||||||||    
T  32476268 tttttcattgttatacccttatttattgaatttcatcaaacttaactacttcattaactacaattaataag 32476338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 13335169 - 13335266
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||||| |||||||||||  |||||| | ||||||||| | ||||||||||||||||  ||||||| ||||  ||||||| ||||||||||    
T  13335169 ttagaataccaatgcaacatttattattttttccattattataccctgatttattgaatttcatcaaacttaactactctactaactgcaattaataa 13335266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 40996525 - 40996430
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||| ||||||| |||| ||||||| || ||  || |||||||||||||||||| ||||||||  | ||||||||||||||||||||||    
T  40996525 ttagaataccaatgcaacattcattt-tttttcattagtacccc-ttatttattgaatttcatccaacttaaccatttcactaactacaattaataag 40996430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 1739511 - 1739595
Alignment:
Q  16 aacatttatttatttt-tcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||||||||| |||| ||||| ||||||| ||||||||| ||||||||  || |||| ||||| ||||||||||||||||||||    
T  1739511 aacatttattttttttctcacttttatacccttatttattaaatttcatcaaaattaactacttaactaactacaattaataaga 1739595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 11977064 - 11977001
Alignment:
Q  35 ctattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||||| ||||||||||||||||||  ||||||| ||||  |||||||||||||||||||    
T  11977064 ctattatacctttatttattgaatttcatctaacttaactactctactaactacaattaataag 11977001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 26626239 - 26626177
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| |||||||||||||||||||||||   | |||| ||||||||||||||||||||    
T  26626239 tattatacccttatttattgaatttcattcaaccggactactccactaactacaattaataag 26626177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 39482604 - 39482666
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| |||||||||||||||||||| |||||| || | ||||||||| ||||||||||    
T  39482604 tattatacccttatttattgaatttcattccacttaactagtccactaactataattaataag 39482666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 4924202 - 4924133
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||||| |||||| ||||||||| | ||||||||||||||| ||||  | ||||||||||||||||    
T  4924202 tttttcactaatatacccttatttattaagtttcattcaacttaactactctattaactacaattaataa 4924133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 31231686 - 31231781
Alignment:
Q  5 aataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| || ||||||||  |||||  || ||| ||||| |||||||||||| || || |||||||| |||| ||||||||||||||||||||    
T  31231686 aataccaatgcatcatttattatttttttccattataatacccttatttattgaactttatccaacttaactactccactaactacaattaataag 31231781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 32678402 - 32678454
Alignment:
Q  46 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| |||||||| |||||||| |||| ||||||||||||||||||||    
T  32678402 ttatttatttaatttcatccaacttaactactccactaactacaattaataag 32678454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 36007022 - 36006954
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaata 96  Q
    |||||||||||||| |  ||||||||||||||||||  ||||||| |||  ||||||||||||||||||    
T  36007022 tttttcactattatgctcttatttattgaatttcatcaaacttaattaccccactaactacaattaata 36006954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 10953891 - 10953813
Alignment:
Q  6 ataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaac 85  Q
    |||||||| ||||||||| |||||||||| ||||||||| |||| |||||||||| ||  ||||||| |||| |||||||    
T  10953891 ataccaatgcaacattta-ttatttttcattattatacccttatatattgaatttgatctaacttaactactccactaac 10953813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 10961896 - 10961818
Alignment:
Q  6 ataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaac 85  Q
    |||||||| ||||||||| |||||||||| ||||||||| |||| |||||||||| ||  ||||||| |||| |||||||    
T  10961896 ataccaatgcaacattta-ttatttttcattattatacccttatatattgaatttgatctaacttaactactccactaac 10961818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 27294176 - 27294125
Alignment:
Q  46 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||||||||||||| |||||||| |||| |||||||| ||||||||||    
T  27294176 ttatttattgaatttcatccaacttaattactccactaactgcaattaataa 27294125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 43719365 - 43719302
Alignment:
Q  34 actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||| |||||||||||||||||| |||||||| || |  |||||||| |||||||||    
T  43719365 actattatacctttatttattgaatttcatccaacttaattattcaactaactataattaataa 43719302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 39466197 - 39466103
Alignment:
Q  5 aataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaa-cttaaatacttcactaactacaattaataa 97  Q
    |||||| |||||||||||||| | ||||||||||||||| | ||||||||||||||| || |||  |||| |||| ||||||| || ||||||||    
T  39466197 aataccgatacaacatttattatttttttcactattatatccttatttattgaattttatccaattttaactactgcactaaccacgattaataa 39466103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 21649487 - 21649427
Alignment:
Q  37 attataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||| |||||||||||||||||||||||| |||| ||||  ||||||||  ||||||||    
T  21649487 attatatcattatttattgaatttcattcaatttaactactcaactaactatgattaataa 21649427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 42886990 - 42887050
Alignment:
Q  37 attataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||  ||||||||||||||| || |||||||| |||  |||||||||||||||||||    
T  42886990 attatactcttatttattgaattttatccaacttaactacgccactaactacaattaataa 42887050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 5053280 - 5053217
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||||||  ||||||||||||| |||| ||| |||| |||| | |||||||||||||||||||    
T  5053280 tattatactcttatttattgaatctcatccaatttaactactccgctaactacaattaataaga 5053217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 97
Target Start/End: Original strand, 31331419 - 31331458
Alignment:
Q  58 tttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  31331419 tttcatccaacttaattacttcactaactacaattaataa 31331458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 12559558 - 12559615
Alignment:
Q  42 accattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||||||||||| || |||||  ||||| | || |||||||||||||||||||||||    
T  12559558 accattatttatttaaattcatcaaacttgactagttcactaactacaattaataaga 12559615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 5356602 - 5356650
Alignment:
Q  49 tttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||||||| |||||||| || | || ||||||||||||||||    
T  5356602 tttattgaatttcatccaacttaattattccattaactacaattaataa 5356650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 6796460 - 6796395
Alignment:
Q  36 tattataccattatttattgaatttcattcaac----ttaaatacttcactaactacaattaataa 97  Q
    ||||||||| ||||||| ||||||| |||||||    |||| |||| |||||||||||||||||||    
T  6796460 tattatacccttatttaatgaattttattcaacttaattaactactccactaactacaattaataa 6796395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 34057731 - 34057691
Alignment:
Q  50 ttattgaatttcattcaacttaaatacttcactaactacaa 90  Q
    |||||||||||||| |||||||| || ||||||||||||||    
T  34057731 ttattgaatttcatccaacttaactatttcactaactacaa 34057691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 36967354 - 36967390
Alignment:
Q  28 tttttcactattataccattatttattgaatttcatt 64  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  36967354 tttttcattattatacccttatttattgaatttcatt 36967390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 34153 - 34083
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||| ||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||    
T  34153 ttttccactattataccattatttattgaatttcatccaacttaactatttcactaactacaattaataag 34083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 21350773 - 21350696
Alignment:
Q  21 ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||| |||| |||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  21350773 ttattttttttccactattatacccttatttattgaatttcatccaacttaactactccactaactacaattaataag 21350696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 2459434 - 2459529
Alignment:
Q  5 aataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| || ||||||||  | ||||||||||||||||| |||||||||||||||||| | |||||| |||| ||||||||||||||||||||    
T  2459434 aataccaatgcagcatttattattttttttcactattatacccttatttattgaatttcatcctacttaactactccactaactacaattaataag 2459529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 34947459 - 34947558
Alignment:
Q  1 ttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||| |||||||||||  |||||  || ||||||||| | |||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  34947459 ttagaataccaatgcaacatttattatttttttccattattataccctcatttattgaatttcatccaacttaactactccactaactacaattaataag 34947558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 25571379 - 25571477
Alignment:
Q  1 ttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||| ||||||||||| | ||||| | ||||||||| |||||||||||||||||| |||||||| || | |||||||||||| |||||||    
T  25571379 ttagaataccaatgcaacatttattatttttttaattattatacccttatttattgaatttcatccaacttaactattccactaactacaactaataag 25571477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 9785973 - 9786046
Alignment:
Q  25 ttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||||  ||||||||| ||||||||||||||| || |||||||| |||||||||||||||||||||||||    
T  9785973 ttatttttctttattatacccttatttattgaattttatccaacttaactacttcactaactacaattaataag 9786046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 34100688 - 34100619
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||| ||||||| ||||||||||||||||    
T  34100688 tttttcactattatacccttatttattgaatgtcatccaacttaactacttcagtaactacaattaataa 34100619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 759261 - 759162
Alignment:
Q  1 ttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||| || ||||||||  |||||  || ||||||||| |||||||||||||||||| |||||||| |||| | ||||||||||||||||||    
T  759261 ttagaataccaatgcagcatttattatttttttccattattatacccttatttattgaatttcatccaacttaactactccgctaactacaattaataag 759162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 28202479 - 28202380
Alignment:
Q  1 ttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||||||||||| ||||||||  |||||  || ||||||||  |||||||||||||||||| |||||| | |||| ||||||||||||||||||||    
T  28202479 ttagaataccaatacagcatttattatttttttccattattatactcttatttattgaatttcatccaactttactactccactaactacaattaataag 28202380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 41506206 - 41506135
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||||| ||||||||  |||||||||||||||||| |||||||| |||| |||||||||||||||||||||    
T  41506206 tttttcaatattatactcttatttattgaatttcatccaacttaactactccactaactacaattaataaga 41506135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 7463198 - 7463268
Alignment:
Q  25 ttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaat 95  Q
    ||||||||||||||| || | |||||||||||||||||| |||||||| |||| |||||||||||||||||    
T  7463198 ttatttttcactattctatctttatttattgaatttcatccaacttaactactccactaactacaattaat 7463268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 28103721 - 28103791
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||| |||||||||||  |||||||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  28103721 ttttccactattatacgcttatttattgaatttcatccaacttaaccacttcactaactacaattaataag 28103791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 11373564 - 11373499
Alignment:
Q  33 cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||||||  |||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  11373564 cactattatactcttatttattgaatttcatccaacttaactactccactaactacaattaataag 11373499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 19271898 - 19271805
Alignment:
Q  5 aataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||| |||||||||||  |||||| | ||||||||| ||||||||| | |||||| |||||||| |||| |||||||||||||||||||    
T  19271898 aataccaatgcaacatttattattttttccaatattatacccttatttattaattttcatccaacttaactactccactaactacaattaataa 19271805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 37245653 - 37245749
Alignment:
Q  5 aataccaatacaacatttatttatttttc--actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||||||| |||||||||||  ||||||  ||||||||||| |||||||||||||||||| ||||||||  ||| |||| | ||||||||||||||    
T  37245653 aataccaatgcaacatttattattttttctcactattatacccttatttattgaatttcatccaacttaaccactccacttattacaattaataaga 37245749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 32346222 - 32346122
Alignment:
Q  1 ttagaataccaatacaacatttatt-tatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| ||| || |||||||| | |||||| | ||||||||| ||||||||||||||||||||||||||| |||| |||||| || ||||||||||    
T  32346222 ttagaatactaatgcagcatttattatctttttccattattatacccttatttattgaatttcattcaacttaactactccactaattataattaataag 32346123  T
Q  99 a 99  Q
    |    
T  32346122 a 32346122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 49101659 - 49101719
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaata 96  Q
    ||||||||  ||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  49101659 tattatacttttatttattgaatttcattcaacttaactactccactaactacaattaata 49101719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 3178334 - 3178276
Alignment:
Q  39 tataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||||    
T  3178334 tatacccttatttattgaatttcatccaacttaactactccactaactacaattaataa 3178276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 17828498 - 17828421
Alignment:
Q  21 ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||||| ||||||| ||||||| |||||||||||||| ||||| |||||||| |||| |||||||||||||| ||||||    
T  17828498 ttatttttttttcattattatatcattatttattgaa-ttcatccaacttaattactccactaactacaattgataaga 17828421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 26974019 - 26974085
Alignment:
Q  33 cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||||||||||  ||||||| | ||||||||||||||||| |||| |||||||||||||||||||||    
T  26974019 cactattatacatttatttaataaatttcattcaacttaactactccactaactacaattaataaga 26974085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 32019083 - 32018986
Alignment:
Q  4 gaataccaatacaacatttatttatttttc--actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||||| |||||||||||||||  ||||||  |||||||  || ||||||||| |||||||| |||||||| |||| ||||||| |||||||||||||    
T  32019083 gaatactaatacaacatttattattttttcccactattaatcccttatttattaaatttcatccaacttaattactccactaacaacaattaataaga 32018986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 33819203 - 33819273
Alignment:
Q  29 ttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||||||||||||||| ||||||| ||||||||||||||||| | |||| ||| ||| |||||||||||||    
T  33819203 ttttcactattatacccttatttaatgaatttcattcaacttcactactccacaaacaacaattaataaga 33819273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 38391729 - 38391807
Alignment:
Q  21 ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||||| ||||||| ||||||||  |||||||||||||||||| |||||||| || | |||||||||||||||| ||||    
T  38391729 ttatttttttttcattattatacttttatttattgaatttcatccaacttaattattccactaactacaattaacaaga 38391807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 6495075 - 6495006
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||| ||||||||| ||||||||| |||||||| |||||| | |||| |||||||||||||||||||    
T  6495075 tttttcattattatacccttatttattaaatttcatccaactttactactccactaactacaattaataa 6495006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 21390276 - 21390353
Alignment:
Q  21 ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||| |||| || ||||||||| ||||||||||||||||||  ||||||| |||| ||||||||||||| ||||||    
T  21390276 ttattttttttccattattatacccttatttattgaatttcatctaacttaactactccactaactacaatcaataag 21390353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 24516425 - 24516360
Alignment:
Q  33 cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||| || | |||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  24516425 cactattttatctttatttattgaatttcatccaacttaactactccactaactacaattaataag 24516360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 46478441 - 46478364
Alignment:
Q  21 ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||| |||| |||||||||||  |||||||||||||||||| |||||||| ||||  | |||||||||||||||||    
T  46478441 ttattttttttccactattatactcttatttattgaatttcatccaacttaactactcaattaactacaattaataag 46478364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 16904367 - 16904435
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaata 96  Q
    |||| |||||||||||| ||||||||||||||| || |||||||| || ||||||||||| ||||||||    
T  16904367 ttttccactattatacccttatttattgaatttgatccaacttaattatttcactaactataattaata 16904435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 22738665 - 22738756
Alignment:
Q  5 aataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaat 95  Q
    |||||||||  ||||||||||  |||||| ||||||||||| ||||||||| |||||||| |||||||| || |  ||||||||||||||||    
T  22738665 aataccaatggaacatttattattttttccactattatacctttatttattaaatttcatccaacttaactaatctactaactacaattaat 22738756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 13961920 - 13962017
Alignment:
Q  1 ttagaataccaatacaacatttatttatttt-tcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||| || ||||||||| |||| ||| ||  ||| ||||||||||| |||||||| |||||||| |||| ||||||||||| ||||||||    
T  13961920 ttagaataccaatgcagcatttattttttttctca-taggatatcattatttattaaatttcatccaacttaactactccactaactacacttaataag 13962017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 44424132 - 44424202
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||| ||| ||||| |||||||||||| ||||| |||||||| |||| ||||||||||| ||||||||    
T  44424132 tttttcattataatacccttatttattgaacttcatccaacttaattactccactaactacatttaataag 44424202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 48608862 - 48608924
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||  |||||||||||||||||| |||||||| ||| ||||||||||| |||||||||    
T  48608862 tattatactcttatttattgaatttcatccaacttaactacatcactaactacgattaataag 48608924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 17610708 - 17610608
Alignment:
Q  1 ttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||| ||||| |||||||||||||||||  ||||| |||| |  |||||||||||||||| || | |||| || |||||||| || ||||||||||    
T  17610708 ttagaatatcaatataacatttatttattttttccactaatatatccctatttattgaatttcactctaattaactatttcactaattaaaattaataag 17610609  T
Q  99 a 99  Q
    |    
T  17610608 a 17610608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 37490338 - 37490422
Alignment:
Q  5 aataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaacta 87  Q
    ||||||||| |||||||||||  ||||||| |||| ||| |  |||||||||||||||||||||| |||| |||| |||||||||    
T  37490338 aataccaatgcaacatttattattattttttactagtatgctcttatttattgaatttcattcaatttaattactccactaacta 37490422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 83343 - 83444
Alignment:
Q  1 ttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||||| || ||||||||  |||||   || ||| ||||  ||||||||||||||||||  ||||||| |||| | |||||||||||||||||    
T  83343 ttagaataccaatgcagcatttattattttttttccattatcatactcttatttattgaatttcatcaaacttaactactccgctaactacaattaataa 83442  T
Q  98 ga 99  Q
    ||    
T  83443 ga 83444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 21760154 - 21760055
Alignment:
Q  1 ttagaataccaatacaacatttatt-tatttttcact-attataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||| |||| ||||||||||| ||||||||  | |||||||| | | |||||||||||||| |||||||| |||| || |||||||||||| ||||    
T  21760154 ttagaatatcaatgcaacatttattatatttttcctttattataccctcaattattgaatttcatccaacttaactactccattaactacaattagtaag 21760055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 36790697 - 36790798
Alignment:
Q  1 ttagaataccaatacaacatttatt--tattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaata 96  Q
    |||||||| |||| || ||||||||  |||||||  || ||||||||| |||||||||||||||||| | || ||| ||||  |||||||||||||||||    
T  36790697 ttagaatagcaatgcagcatttattattattttttccattattatacccttatttattgaatttcatccgacataactactcaactaactacaattaata 36790796  T
Q  97 ag 98  Q
    ||    
T  36790797 ag 36790798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 7457586 - 7457492
Alignment:
Q  5 aataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||| |||| |||||||||||  |||||| ||||||||||  ||||||||||||||| ||| ||||||| || | | ||||||||| ||||||||    
T  7457586 aatatcaatgcaacatttattattttttccactattatactcttatttattgaatttaatttaacttaattattccgctaactacatttaataag 7457492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 30546485 - 30546427
Alignment:
Q  39 tataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||| ||||||||||||||||| || |||||| |||| || ||||||||||||||||    
T  30546485 tatacccttatttattgaatttcactccacttaactactccaataactacaattaataa 30546427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 47045612 - 47045546
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaa 94  Q
    |||| |||||||||||  |||||| ||||||||||| |||||||| |||| ||||||| ||||||||    
T  47045612 ttttccactattatactcttatttgttgaatttcatccaacttaactactacactaaccacaattaa 47045546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 24166972 - 24167049
Alignment:
Q  21 ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||| | ||||||| |||| || |||||| |||||||||||||||  ||| |||| |||||||||| |||||||||    
T  24166972 ttatttttatttcacttttattcccttatttcttgaatttcattcaatgtaactactgcactaactactattaataag 24167049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 8592575 - 8592511
Alignment:
Q  34 actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||  ||||||||| ||||||||  ||||| | |||| ||||||||||||||||||||    
T  8592575 actattatactcttatttattaaatttcatctaactttactactccactaactacaattaataag 8592511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 17610890 - 17610958
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaata 96  Q
    ||||| ||||||||| | || | ||||||||||||| |||||||| || |||| |||||||||||||||    
T  17610890 ttttttactattatatctttgtgtattgaatttcatccaacttaactatttcaataactacaattaata 17610958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 32018880 - 32018782
Alignment:
Q  4 gaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||||| |||||||||||||||  |||||   ||||||||  || ||||||||| ||||| || |||||||| ||||  |||||| |||||||||||||    
T  32018880 gaatactaatacaacatttattatttttttcccactattaagcccttatttattaaatttaatccaacttaattactctactaacgacaattaataaga 32018782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 4958737 - 4958674
Alignment:
Q  32 tcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaat 95  Q
    |||||||||||||  |||| |||||| |||||  ||||||| |||||||||||||| |||||||    
T  4958737 tcactattatacccctattgattgaacttcatcaaacttaactacttcactaactataattaat 4958674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 30865963 - 30866026
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||||| | ||||||||||||||||||  ||||||| |||| |||||| || |||||||||||    
T  30865963 tattatatctttatttattgaatttcatctaacttaactactccactaattataattaataaga 30866026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 31930622 - 31930568
Alignment:
Q  46 ttatttattgaatttcattcaacttaa--atacttcactaactacaattaataag 98  Q
    ||||||||||||||||||  |||||||  ||||| ||||||||||||||||||||    
T  31930622 ttatttattgaatttcatcaaacttaactatactccactaactacaattaataag 31930568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 37490448 - 37490510
Alignment:
Q  25 ttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaacta 87  Q
    |||||||| |||| ||| |  |||||||||||||||||||||| |||| |||| |||||||||    
T  37490448 ttattttttactagtatgctcttatttattgaatttcattcaatttaattactccactaacta 37490510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 27920994 - 27921047
Alignment:
Q  46 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||| |||||| ||||| |||||||| || | |||||||||||||||||||||    
T  27920994 ttattgattgaacttcatccaacttaactaatgcactaactacaattaataaga 27921047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 35333051 - 35333100
Alignment:
Q  48 atttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||| |||||||||||  ||||||| |||| |||||||||||||||||||    
T  35333051 atttgttgaatttcatctaacttaactactccactaactacaattaataa 35333100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 24122563 - 24122607
Alignment:
Q  46 ttatttattgaatttcattcaacttaaatacttcactaactacaa 90  Q
    |||||||||||||||||||| |||||  || ||||||||||||||    
T  24122563 ttatttattgaatttcattctacttatttatttcactaactacaa 24122607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 43873929 - 43873981
Alignment:
Q  46 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| || ||||| |||||||| |||| ||||||||||| ||||||||    
T  43873929 ttatttattaaacttcatccaacttaactactccactaactacatttaataag 43873981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 12039038 - 12039134
Alignment:
Q  5 aataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||| ||| |||||||||||  |||||| |||||||||||| |||||||||||||| ||| ||||||||||||| || ||||||||||||||||||    
T  12039038 aatactaatgcaacatttattattattttccactattatacccttatttattgaattacatccaacttaaatactccattaactacaattaataaga 12039134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 39864067 - 39864163
Alignment:
Q  5 aataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||| |||| |||||||||||  |||||  |||||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||||||    
T  39864067 aatatcaatgcaacatttattatttttttccactattatacccttatttattgaatttcatccaacttaactactccactaactacaattaataaga 39864163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 31042749 - 31042848
Alignment:
Q  1 ttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||| ||||||| ||||||||  |||||  |||||| ||| | ||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  31042749 ttagaatatcaatacatcatttattatttttttccactatgatatctttatttattgaatttcattcaacttaattacttcactacctacaattaataag 31042848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 35367758 - 35367853
Alignment:
Q  5 aataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||||  ||||||||||  | ||||||||||||||||| ||||||||||||||||||  ||||||| |||| ||||||||||||||||||||    
T  35367758 aataccaatgaaacatttattagtctttttcactattatacccttatttattgaatttcatctaacttaactactccactaactacaattaataag 35367853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 37506076 - 37506174
Alignment:
Q  1 ttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||| |||| |||||||||||  |||||  || ||| ||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  37506076 ttagaatatcaatgcaacatttattatttttttccattataatacccttatttattgaatttcattcaacttaactactccactaactacaattaataa 37506174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 44707892 - 44707828
Alignment:
Q  33 cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||||||| |||||||||||||||||| |||||||| | ||||||||||||||||||||||    
T  44707892 cactattatacctttatttattgaatttcatccaacttaactgcttcactaactacaattaataa 44707828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 49224152 - 49224053
Alignment:
Q  1 ttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| ||| |||||||||||  | ||||||| ||| ||||| |||||||||||| ||||| |||||||| |||| ||||||||||||||||||||    
T  49224152 ttagaatactaatgcaacatttattattttttttcattataatacccttatttattgaacttcatccaacttaactactccactaactacaattaataag 49224053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 7759204 - 7759267
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||||||| ||||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  7759204 tattatacccttatttattgaatttcattcaacttaactattccactaactacaattaataaga 7759267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 14757731 - 14757660
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||| |||||||||||| ||||||||| ||||||||  ||||||| ||||||||||||||||||||||||||    
T  14757731 ttttccactattatacccttatttattaaatttcatcgaacttaactacttcactaactacaattaataaga 14757660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 25089233 - 25089154
Alignment:
Q  18 catttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||| ||| |||| || || |||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  25089233 cattttttttttttccattagtatacccttatttattgaatttcatccaacttaactacttcactaactacaattaataa 25089154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 52429333 - 52429395
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| ||||||| ||||||||||||||||||| |||| ||||||||||||||||||||    
T  52429333 tattatacccttatttaatgaatttcattcaacttaactactccactaactacaattaataag 52429395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 2572424 - 2572519
Alignment:
Q  5 aataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||| |||| ||| ||||||||||||||   || |||||||   ||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  2572424 aatatcaatgcaatatttatttatttttttccattattatatttttatttattgaatttcattcaacttaactactccactaactacaattaataa 2572519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 4659733 - 4659816
Alignment:
Q  5 aataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaacta 87  Q
    ||||||||| ||||||| ||||||||||  |||||||||| | ||||||||||||||||||||||||||| |||| |||||||||    
T  4659733 aataccaatgcaacatt-atttattttttccactattatatccttatttattgaatttcattcaacttaattactccactaacta 4659816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 6785212 - 6785304
Alignment:
Q  5 aataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaat 95  Q
    |||||| || |||||||||||  |||||  |||||||||||| ||||||||||||||||||  ||||||| |||| |||||||||||||||||    
T  6785212 aatacctatgcaacatttattatttttttccactattatacccttatttattgaatttcatcaaacttaactactccactaactacaattaat 6785304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 9307613 - 9307674
Alignment:
Q  33 cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaa 94  Q
    |||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||    
T  9307613 cactattatacctttatttattgaatttcatccaacttaactactccactaactacaattaa 9307674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 24991816 - 24991721
Alignment:
Q  5 aataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||| ||| |||||||||||  |||||   |||||||||||| |||||||||||||||||| |||||||| || | |||||||||||||||||||    
T  24991816 aatactaatgcaacatttattatttttttcccactattatacctttatttattgaatttcatccaacttaactattccactaactacaattaataa 24991721  T

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Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 13579750 - 13579690
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaata 96  Q
    ||||||||| ||||||||||||||||||  |||||||||||| ||||||||||||||||||    
T  13579750 tattatacccttatttattgaatttcatcaaacttaaatactccactaactacaattaata 13579690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 20210006 - 20209907
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttcac--tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||| || ||||||||  |||||| |  ||| ||||| |||||||||||| ||||| |||||||| |||| ||||||||||||||||||||    
T  20210006 ttagaataccaatgcagcatttattattttttcccattataatacccttatttattgaacttcatccaacttaactactccactaactacaattaataag 20209907  T

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Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 26093361 - 26093445
Alignment:
Q  16 aacatttatt-tatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||||| |||||||| | ||||||||| |||||||||||| |||||  ||||||| |||||||||||||||||||||||||    
T  26093361 aacatttattatatttttccattattatacccttatttattgaacttcatctaacttaattacttcactaactacaattaataag 26093445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 16395183 - 16395117
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaa 94  Q
    ||||||| ||||||| ||||||||||||||||||||  ||||||| |||| ||||||||||||||||    
T  16395183 tttttcattattatatcattatttattgaatttcatctaacttaactactccactaactacaattaa 16395117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 37276442 - 37276512
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||| ||||||||| |||||||||||||||||| ||| |||| || | ||||||||||||||||||||    
T  37276442 tttttcattattatacccttatttattgaatttcatccaatttaactattccactaactacaattaataag 37276512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 8896499 - 8896400
Alignment:
Q  1 ttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||| |||| |||||||||||  |||||   ||  |||||||| |||||||||||||||||| ||||||||  ||| |||||||||||||||||||    
T  8896499 ttagaatatcaatgcaacatttattatttttttcccatgattatacctttatttattgaatttcatccaacttaaccactccactaactacaattaataa 8896400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 22856399 - 22856307
Alignment:
Q  5 aataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaat 95  Q
    |||| |||| |||||||||||  |||||  |||||||||||  |||||||||||||||||| || ||||| |||| |||||||||||||||||    
T  22856399 aatatcaattcaacatttattatttttttgcactattatacttttatttattgaatttcatccagcttaactactccactaactacaattaat 22856307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 30755108 - 30755009
Alignment:
Q  1 ttagaataccaatacaacatttatttatttt---tcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||||| || ||| ||||| ||||   ||| ||||||||| ||||||||||||||||||  ||||||| || ||||||||||| |||||||||    
T  30755108 ttagaataccaatgcatcatgtattttttttctttcattattatacctttatttattgaatttcatctaacttaactatttcactaactataattaataa 30755009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 40145013 - 40144914
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttcac--tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||| |||| |||||||||||  |||||| |  ||| ||||| |||||||||||| ||||| |||||||| |||| || |||||||||||||||||    
T  40145013 ttagaatatcaatgcaacatttattattttttcccattataatacccttatttattgaacttcatccaacttaactactccattaactacaattaataag 40144914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 2137520 - 2137437
Alignment:
Q  15 caacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||| | ||||||| ||||||| | ||||||||||||||| || ||||||||||||| || |||| |||||||||||    
T  2137520 caacatttattatttttttcattattatatctttatttattgaattttatccaacttaaatactccaataacaacaattaataa 2137437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 9379184 - 9379282
Alignment:
Q  1 ttagaataccaatacaacatttatttattttt-cactattataccattatttattgaatttcattcaacttaaatact-tcactaactacaattaataa 97  Q
    |||||||| |||| ||| |||||||||||||| || |||||||||  |||||||| ||||||||  ||||||| ||||  |||||||||||||||||||    
T  9379184 ttagaatatcaatgcaatatttatttatttttccattattatacctatatttattaaatttcatcaaacttaactactcccactaactacaattaataa 9379282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 15699115 - 15699173
Alignment:
Q  40 ataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||| |||||||||||| ||||| |||||||| |||| ||||||||||||||||||||    
T  15699115 atacccttatttattgaacttcatccaacttaactactccactaactacaattaataag 15699173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 38787330 - 38787392
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| |||||||||||||||||| ||| |||| |||| ||||||||| ||||||||||    
T  38787330 tattatacccttatttattgaatttcatccaatttaactactccactaactataattaataag 38787392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 916979 - 917075
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||| |||| || ||||||||| |||| || |||| |||| ||||||||| |||||||| |||||||| || |  |||||||||||||||||||    
T  916979 ttagaatatcaatgcagcatttattt-ttttccattattttacccttatttattaaatttcatgcaacttaactaatctactaactacaattaataag 917075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 23169153 - 23169060
Alignment:
Q  5 aataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| |||||||||||  |||| |||||||||||  |||||||||||||||||    |||||| || || |||||||| ||||||||||    
T  23169153 aataccaatgcaacatttattacttttccactattatactcttatttattgaatttcacctcacttaactatttaactaactataattaataag 23169060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 27896942 - 27897007
Alignment:
Q  34 actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||||||||| ||||||||| |||||||| ||||| || |||| ||||||||| |||||||||||    
T  27896942 actattatacctttatttattaaatttcatccaactaaattactccactaactataattaataaga 27897007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 35682959 - 35682882
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatact 77  Q
    |||||||| |||| ||| |||||||  |||||| ||||||||||| |||||||||||||||||| |||||||| ||||    
T  35682959 ttagaatatcaatgcaatatttattattttttccactattatacccttatttattgaatttcatccaacttaactact 35682882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 44761660 - 44761599
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||| |||||||||||||||||||||||||||  | | ||||||||| |||||||||    
T  44761660 tattatacccttatttattgaatttcattcaacttaaccattccactaactataattaataa 44761599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 37177814 - 37177886
Alignment:
Q  25 ttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||||||||||||||  ||||||||| ||||| || |||||||| ||||  ||||||||| ||||||||    
T  37177814 ttatttttcactattatactcttatttatttaattttatccaacttaactactatactaactaccattaataa 37177886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 6023798 - 6023717
Alignment:
Q  19 atttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||||||   |||||||||||  | || ||||||||||||| |||||||| |||| || ||||||||||||||||    
T  6023798 atttatttatttttttccactattatactctcatgtattgaatttcatccaacttaactactccaataactacaattaataa 6023717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 6160588 - 6160525
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||||||| || ||||||||||| |||||||||||| || | || ||||||||||||||||||    
T  6160588 tattatacccttgtttattgaattacattcaacttaactattccattaactacaattaataaga 6160525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 97
Target Start/End: Original strand, 10495838 - 10495889
Alignment:
Q  46 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||||||||||||| |||||||| |||| |||||| ||||||||||||    
T  10495838 ttatttattgaatttcatccaacttaactactccactaattacaattaataa 10495889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 15904751 - 15904802
Alignment:
Q  47 tatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||||||||||| |  |||||| |||||||||||||||||||||||||    
T  15904751 tatttattgaatttcacttcacttaactacttcactaactacaattaataag 15904802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 31978781 - 31978718
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||||||| ||||||| ||||||| ||||||||||| |||| || |||||| |||||||||||    
T  31978781 tattatacccttatttaatgaatttaattcaacttaactactccattaactataattaataaga 31978718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 33733428 - 33733330
Alignment:
Q  1 ttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||||||||  | ||||||||  | |||| || ||||||||| |||||||||||||||||||| || |||  |||  ||||||||||||||||||    
T  33733428 ttagaataccaatgaagcatttattattcttttccattattatacccttatttattgaatttcattctacctaaccactctactaactacaattaataa 33733330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 37539108 - 37539179
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||| |||||| ||||| ||||||||||||||||||  ||||||| ||||  ||||||||||||||| ||||    
T  37539108 ttttccactatgatacccttatttattgaatttcatcaaacttaactactctactaactacaattaacaaga 37539179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 52837269 - 52837332
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    ||||||||| ||| |||||||||||||||||  |||| |||| ||||| |||||||||||||||    
T  52837269 tattatacctttaattattgaatttcattcatattaactactccactagctacaattaataaga 52837332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 3260544 - 3260642
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| ||||||| |||||||  || ||| |||||||||   ||||||||| ||||||||  ||||||| | || ||||||||||||||||||||    
T  3260544 ttagaatactaatacaatatttattatttgttctactattataaacttatttattcaatttcatcaaacttaacttctccactaactacaattaataag 3260642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 24500128 - 24500066
Alignment:
Q  15 caacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatact 77  Q
    |||||||||||  ||||||||||||| |||||||||| |||||||||||  ||||||| ||||    
T  24500128 caacatttattgttttttcactattacaccattatttgttgaatttcatctaacttaactact 24500066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 32826155 - 32826059
Alignment:
Q  5 aataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaata---cttcactaactacaattaataa 97  Q
    |||||||||||||||||||||  |||||| | ||| ||||| |||||||||||| ||||| |||||||| ||   || |||||| ||||||||||||    
T  32826155 aataccaatacaacatttattattttttccattataatacccttatttattgaacttcatccaacttaactactcctccactaattacaattaataa 32826059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 34031656 - 34031595
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||  ||||||||||||||||||||||| | | || | |||||||||||||||||||    
T  34031656 tattatactcttatttattgaatttcattcaaccttactattacactaactacaattaataa 34031595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 29778528 - 29778464
Alignment:
Q  33 cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||  |||||||||||||||| || |||||||  | ||| ||||||||||||||||||    
T  29778528 cactattatattattatttattgaattttatccaacttaggttcttaactaactacaattaataa 29778464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 34331299 - 34331347
Alignment:
Q  46 ttatttattgaatttcattcaacttaaatacttcactaactacaattaa 94  Q
    ||||||||| ||||||||| || |||| |||||||||||||||||||||    
T  34331299 ttatttattcaatttcatttaatttaattacttcactaactacaattaa 34331347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 39887809 - 39887885
Alignment:
Q  21 ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||| ||| ||||| ||||||  ||||||||||||||||||  ||||||| ||||  ||||||||| ||||||||    
T  39887809 ttatttttttctcactgttatacatttatttattgaatttcatcaaacttaattactcaactaactactattaataa 39887885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 4441732 - 4441674
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaa 94  Q
    ||||||||| ||||||||| ||||||||  || |||| |||| ||||||||||||||||    
T  4441732 tattatacctttatttattaaatttcatctaatttaattactccactaactacaattaa 4441674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 7351617 - 7351687
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||| ||||||||  |||||||||||||||  | |||||||| || | ||||||||| ||||||||||    
T  7351617 tttttcattattatactcttatttattgaattttgtccaacttaattattccactaactagaattaataag 7351687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 36701910 - 36701972
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||  ||||||||||||||||||  |||||||  | | ||||||||||||||||||||    
T  36701910 tattatactcttatttattgaatttcatcaaacttaacgattccactaactacaattaataag 36701972  T

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Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 36718014 - 36718076
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||  ||||||||||||||||||  |||||||  | | ||||||||||||||||||||    
T  36718014 tattatactcttatttattgaatttcatcaaacttaacgattccactaactacaattaataag 36718076  T

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Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 40261202 - 40261275
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaactta--aatacttcactaactacaattaataaga 99  Q
    ||||||| ||||||| | ||||||||||||||||||| ||||||   | ||| |||||||||||| ||||||||    
T  40261202 tttttcattattatatctttatttattgaatttcatttaacttagctacactccactaactacaactaataaga 40261275  T

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Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 11449839 - 11449935
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||| ||| |||||||| ||| | |||| | ||||||||| |||||||||||||||||| ||| || | ||||  | ||||||||||||||||    
T  11449839 ttagaatactaatgcaacatttttttttctttccattattatacc-ttatttattgaatttcatccaattttactactctattaactacaattaataa 11449935  T

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Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 28436690 - 28436621
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||||||| | ||||||||| || |||||  || |||| || |||| ||||||||||||||||    
T  28436690 tttttcactattatatcgttatttatttaacttcatcgaatttaactaattcattaactacaattaataa 28436621  T

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Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 32219808 - 32219727
Alignment:
Q  19 atttatttatttttcactattataccattattt-attgaatttcattcaacttaaatacttcactaactacaattaataaga 99  Q
    |||||||  |||||||| |||||||  |||||| |||||||||||| ||||||||  ||| ||| ||||| |||||||||||    
T  32219808 atttattactttttcacaattatacatttattttattgaatttcatccaacttaaccactccacaaactataattaataaga 32219727  T

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Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 27721513 - 27721581
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaata 96  Q
    |||| |||||||||||  ||||||||||||||| || ||| |||| || |  |||||||||||||||||    
T  27721513 ttttccactattatacttttatttattgaattttatccaatttaactattctactaactacaattaata 27721581  T

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Target: scaffold0095 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 50156 - 50254
Alignment:
Q  1 ttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||||||| |||| || ||||||||  ||||||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||  |||||||||    
T  50156 ttagaatatcaatgcagcatttattattatttttcactattatacccttatttatttaatttcattcaacttaattactccactaactgtaattaataa 50254  T

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Target: scaffold0095; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 22304 - 22398
Alignment:
Q  5 aataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaa-cttaaatacttcactaactacaattaataa 97  Q
    |||||| |||||||||||||| | ||||||||||||||| | ||||||||||||||| || |||  |||| |||| ||||||| || ||||||||    
T  22304 aataccgatacaacatttattatttttttcactattatatccttatttattgaattttatccaattttaactactgcactaaccacgattaataa 22398  T

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Target: scaffold0012 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 105673 - 105735
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  105673 tattatacccttatttatcgaatttcattcaacttaactacttcactaactacaattaataag 105735  T

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Target: scaffold0330 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 5344 - 5441
Alignment:
Q  1 ttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||| |||||||||||||||||  ||||||  |  |||||| |||||||||||||||||| |||||||| |||| ||||||||| ||||||||||    
T  5344 ttagaatgccaatacaacatttattattttttccattatatacctttatttattgaatttcatccaacttaactactccactaactaaaattaataag 5441  T

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Target: scaffold0003 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 252962 - 252870
Alignment:
Q  5 aataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||| ||||||||||| | ||||||| ||||||||  ||||||||||||||||||||||||||| |||| || | ||||||||||||||    
T  252962 aataccaatgcaacatttattatttttttcattattatactcttatttattgaatttcattcaacttaactactccaat-actacaattaataa 252870  T

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Target: scaffold0018 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 136165 - 136101
Alignment:
Q  34 actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||||||||||||||| ||||||||  ||||||| |||||||||||||| ||||||||||    
T  136165 actattataccattatttatttaatttcatcaaacttaactacttcactaactataattaataag 136101  T

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Target: scaffold0328 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 8145 - 8045
Alignment:
Q  1 ttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||||| || ||||||||  |||||   || ||| ||||| |||||||||||| ||||| |||||||| |||| |||||||||||||||||||    
T  8145 ttagaataccaatgcagcatttattatttttttcccattataatacccttatttattgaacttcatccaacttaattactccactaactacaattaataa 8046  T
Q  98 g 98  Q
    |    
T  8045 g 8045  T

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Target: scaffold0182 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 20479 - 20417
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| | |||||||||||||||| |||||||| ||||||||||||| |||||||||||    
T  20479 tattataccctcatttattgaatttcatccaacttaactacttcactaactgcaattaataag 20417  T

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Target: scaffold1809 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 818 - 749
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    |||| |||||||||||| |||||||||||||||||| ||| ||||| ||| ||||||||||||| |||||    
T  818 ttttccactattatacccttatttattgaatttcatccaatttaaacactccactaactacaatcaataa 749  T

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Target: scaffold0110 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 1682 - 1753
Alignment:
Q  25 ttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaata 96  Q
    ||||||| || ||||||||| ||||||||||||||| || |||||||| |||| |||| |||||||||||||    
T  1682 ttattttccattattatacccttatttattgaatttaatccaacttaactactccactgactacaattaata 1753  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 14298 - 14233
Alignment:
Q  32 tcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 97  Q
    ||||||||||||| ||||||||||||||||||  || |||| |||| || |||||| |||||||||    
T  14298 tcactattatacctttatttattgaatttcatcaaatttaactactccattaactataattaataa 14233  T

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Target: scaffold0302 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 16097 - 16149
Alignment:
Q  46 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||||||||||||||||| || ||||| | ||||| |||||||||||||||||    
T  16097 ttatttattgaatttcatccatcttaactgcttcattaactacaattaataag 16149  T

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Target: scaffold0016 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 76273 - 76328
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 83  Q
    ||||| ||||||||||| ||||||||||||||||||  ||||||| |||| |||||    
T  76273 tttttgactattatacccttatttattgaatttcatctaacttaactactccacta 76328  T

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Target: scaffold0583 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 2014 - 2076
Alignment:
Q  36 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    ||||||||| ||||||||||||||||||  ||  ||| || | ||||||||||||||||||||    
T  2014 tattatacccttatttattgaatttcatcgaatgtaattaatccactaactacaattaataag 2076  T

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Target: scaffold0294 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 17016 - 17086
Alignment:
Q  28 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 98  Q
    |||| ||||||||||   ||||||||||||||||||||||| ||| |||  || |||||| ||||||||||    
T  17016 ttttccactattataattttatttattgaatttcattcaacgtaattacgccattaactataattaataag 17086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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