View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11180A_low_199 (Length: 228)
Name: NF11180A_low_199
Description: NF11180A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11180A_low_199 |
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Alignment Details
Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 5251170 - 5251259
Alignment:
| Q |
7 |
tttggtgttgatgttggattttatatataaaatgtttctttgctgaaagcacaaaaaacaagtgttaaagcataagaatagtggtttttg |
96 |
Q |
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| T |
5251170 |
tttggtgttgatgttggattttatatataaaatgtttctttgcagaaagcacaaaaaacaagtgttacaacataagaatagtggtttttg |
5251259 |
T |
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