View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11180A_low_212 (Length: 222)

Name: NF11180A_low_212
Description: NF11180A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11180A_low_212
NF11180A_low_212
[»] chr8 (18 HSPs)
chr8 (20-144)||(40703458-40703582)
chr8 (27-144)||(28167900-28168017)
chr8 (20-144)||(42604548-42604672)
chr8 (27-143)||(41016955-41017071)
chr8 (20-140)||(41276176-41276296)
chr8 (20-144)||(41855976-41856100)
chr8 (20-144)||(484352-484476)
chr8 (20-144)||(15031419-15031543)
chr8 (20-144)||(24862443-24862567)
chr8 (28-144)||(18439285-18439401)
chr8 (27-134)||(22550173-22550280)
chr8 (20-143)||(45065775-45065898)
chr8 (20-138)||(44051535-44051653)
chr8 (28-131)||(42167923-42168026)
chr8 (27-131)||(26487576-26487680)
chr8 (27-131)||(38032890-38032994)
chr8 (32-125)||(19241648-19241741)
chr8 (32-125)||(19314832-19314925)
[»] chr7 (27 HSPs)
chr7 (20-144)||(42683510-42683634)
chr7 (20-144)||(48271758-48271882)
chr7 (20-144)||(17840306-17840430)
chr7 (27-144)||(41623188-41623305)
chr7 (20-144)||(9366215-9366339)
chr7 (20-144)||(46861173-46861297)
chr7 (28-143)||(21186280-21186395)
chr7 (20-143)||(34141959-34142082)
chr7 (28-142)||(36392807-36392921)
chr7 (20-141)||(28978211-28978332)
chr7 (36-144)||(34157787-34157895)
chr7 (20-144)||(20565746-20565870)
chr7 (20-138)||(48194078-48194196)
chr7 (20-138)||(40589850-40589968)
chr7 (20-144)||(42504353-42504477)
chr7 (20-138)||(45362271-45362389)
chr7 (27-144)||(10225177-10225294)
chr7 (27-131)||(28113391-28113495)
chr7 (28-131)||(4230593-4230696)
chr7 (27-131)||(1641667-1641771)
chr7 (27-131)||(43350377-43350481)
chr7 (27-125)||(20877009-20877107)
chr7 (27-131)||(22291966-22292070)
chr7 (27-131)||(42736111-42736214)
chr7 (27-131)||(15900391-15900495)
chr7 (32-84)||(3380049-3380101)
chr7 (27-131)||(17184320-17184423)
[»] chr4 (36 HSPs)
chr4 (20-144)||(6281501-6281625)
chr4 (20-140)||(56140004-56140124)
chr4 (27-144)||(34152269-34152386)
chr4 (20-144)||(6176413-6176537)
chr4 (20-144)||(21016275-21016399)
chr4 (20-144)||(49095730-49095854)
chr4 (27-144)||(51427184-51427302)
chr4 (20-144)||(37867557-37867681)
chr4 (27-143)||(44559310-44559426)
chr4 (28-143)||(956438-956553)
chr4 (20-138)||(34528796-34528914)
chr4 (20-138)||(39589872-39589990)
chr4 (27-144)||(40352881-40352998)
chr4 (20-144)||(55797728-55797852)
chr4 (20-138)||(1043836-1043954)
chr4 (20-140)||(9490576-9490696)
chr4 (20-144)||(41793900-41794024)
chr4 (28-143)||(49572208-49572323)
chr4 (27-144)||(49422741-49422854)
chr4 (27-131)||(4784326-4784430)
chr4 (27-131)||(42887399-42887503)
chr4 (27-125)||(49816399-49816497)
chr4 (27-131)||(36775468-36775572)
chr4 (28-131)||(21410963-21411066)
chr4 (27-131)||(2774140-2774243)
chr4 (27-131)||(21170599-21170703)
chr4 (27-131)||(49790915-49791019)
chr4 (27-131)||(51026774-51026878)
chr4 (32-131)||(4910624-4910723)
chr4 (28-131)||(21412380-21412483)
chr4 (28-131)||(24076245-24076348)
chr4 (32-131)||(25145652-25145751)
chr4 (27-125)||(43888476-43888574)
chr4 (27-131)||(45940661-45940765)
chr4 (32-131)||(9718377-9718475)
chr4 (32-87)||(17292831-17292886)
[»] chr1 (37 HSPs)
chr1 (29-144)||(18974418-18974533)
chr1 (28-144)||(13974033-13974149)
chr1 (20-144)||(35525172-35525295)
chr1 (27-143)||(42570773-42570889)
chr1 (28-144)||(46142438-46142554)
chr1 (20-144)||(49925424-49925548)
chr1 (20-144)||(27485698-27485821)
chr1 (27-144)||(41803333-41803450)
chr1 (27-144)||(48227618-48227735)
chr1 (21-138)||(51270916-51271033)
chr1 (20-144)||(13634394-13634518)
chr1 (20-144)||(29437041-29437164)
chr1 (20-144)||(49428446-49428570)
chr1 (30-144)||(26494565-26494679)
chr1 (20-138)||(29761155-29761273)
chr1 (29-144)||(24363051-24363166)
chr1 (27-137)||(36910995-36911104)
chr1 (27-144)||(49397753-49397870)
chr1 (31-125)||(6436846-6436940)
chr1 (27-131)||(23343637-23343741)
chr1 (27-131)||(35585888-35585992)
chr1 (27-131)||(37779266-37779370)
chr1 (27-131)||(39856229-39856333)
chr1 (27-131)||(15355770-15355874)
chr1 (27-131)||(17685315-17685419)
chr1 (27-86)||(26634190-26634249)
chr1 (36-144)||(13284564-13284675)
chr1 (20-101)||(44336893-44336974)
chr1 (27-87)||(14172742-14172802)
chr1 (27-131)||(38044190-38044294)
chr1 (27-131)||(49260665-49260769)
chr1 (32-131)||(16531181-16531280)
chr1 (44-125)||(12790273-12790354)
chr1 (27-131)||(24269353-24269457)
chr1 (27-131)||(35186121-35186225)
chr1 (30-125)||(40532366-40532461)
chr1 (47-131)||(31451459-31451543)
[»] chr2 (24 HSPs)
chr2 (27-144)||(35492634-35492751)
chr2 (28-144)||(19470607-19470723)
chr2 (27-143)||(2918349-2918465)
chr2 (20-143)||(16582913-16583036)
chr2 (28-143)||(41498104-41498219)
chr2 (20-144)||(3936399-3936523)
chr2 (20-144)||(22002814-22002938)
chr2 (20-144)||(43983714-43983838)
chr2 (20-144)||(28476494-28476618)
chr2 (20-144)||(39798963-39799087)
chr2 (31-143)||(23408824-23408936)
chr2 (28-143)||(43492563-43492678)
chr2 (20-144)||(17425778-17425902)
chr2 (28-144)||(40676404-40676520)
chr2 (20-138)||(3942495-3942613)
chr2 (27-131)||(33404871-33404975)
chr2 (27-121)||(37311626-37311720)
chr2 (27-131)||(6977952-6978056)
chr2 (28-131)||(15890958-15891060)
chr2 (27-131)||(5421258-5421362)
chr2 (27-131)||(17537894-17537998)
chr2 (27-131)||(16413259-16413362)
chr2 (27-131)||(34520701-34520805)
chr2 (27-131)||(24107754-24107858)
[»] chr6 (21 HSPs)
chr6 (20-144)||(13616877-13617001)
chr6 (27-143)||(32026608-32026724)
chr6 (27-143)||(32036667-32036783)
chr6 (27-144)||(13403917-13404034)
chr6 (20-144)||(6206473-6206597)
chr6 (20-144)||(11693440-11693564)
chr6 (27-143)||(34802168-34802284)
chr6 (27-144)||(32691694-32691811)
chr6 (20-144)||(27641163-27641287)
chr6 (35-144)||(35020248-35020356)
chr6 (20-138)||(29067587-29067705)
chr6 (20-138)||(29109176-29109294)
chr6 (27-143)||(14123812-14123931)
chr6 (31-131)||(20241340-20241440)
chr6 (31-131)||(22135324-22135424)
chr6 (31-131)||(22142677-22142777)
chr6 (27-131)||(12397916-12398019)
chr6 (32-129)||(30763971-30764068)
chr6 (45-143)||(32133671-32133772)
chr6 (32-131)||(33201401-33201500)
chr6 (32-95)||(17464487-17464550)
[»] chr5 (26 HSPs)
chr5 (20-144)||(8538963-8539087)
chr5 (27-144)||(34682913-34683030)
chr5 (28-139)||(20199451-20199562)
chr5 (20-144)||(11028434-11028558)
chr5 (28-144)||(18309366-18309482)
chr5 (20-143)||(11347788-11347911)
chr5 (28-144)||(1399288-1399404)
chr5 (28-144)||(3602448-3602563)
chr5 (20-144)||(8575240-8575364)
chr5 (28-144)||(25499187-25499303)
chr5 (20-144)||(38855141-38855265)
chr5 (27-144)||(35566377-35566494)
chr5 (20-144)||(6329-6453)
chr5 (20-144)||(19035774-19035898)
chr5 (20-143)||(27660476-27660599)
chr5 (27-144)||(35927066-35927181)
chr5 (20-143)||(30710587-30710710)
chr5 (27-131)||(7484478-7484582)
chr5 (27-125)||(1695934-1696032)
chr5 (27-122)||(1972506-1972601)
chr5 (32-131)||(7400831-7400930)
chr5 (27-131)||(6792432-6792536)
chr5 (27-125)||(36349289-36349386)
chr5 (27-75)||(4723076-4723124)
chr5 (32-127)||(10978414-10978509)
chr5 (32-116)||(31239140-31239224)
[»] chr3 (42 HSPs)
chr3 (20-144)||(55268057-55268181)
chr3 (20-144)||(2429584-2429708)
chr3 (27-144)||(55205926-55206042)
chr3 (20-144)||(2267581-2267705)
chr3 (20-144)||(46406004-46406128)
chr3 (20-144)||(52568417-52568541)
chr3 (20-144)||(54391441-54391565)
chr3 (20-143)||(49139150-49139273)
chr3 (28-144)||(7247158-7247275)
chr3 (27-144)||(43570982-43571099)
chr3 (27-144)||(45099454-45099571)
chr3 (28-144)||(2645980-2646096)
chr3 (20-144)||(4003250-4003374)
chr3 (20-144)||(34050726-34050850)
chr3 (20-144)||(36136014-36136137)
chr3 (28-144)||(41579025-41579141)
chr3 (28-144)||(46345591-46345707)
chr3 (20-143)||(34692280-34692403)
chr3 (27-144)||(13894890-13895006)
chr3 (20-137)||(43478134-43478251)
chr3 (20-140)||(49217725-49217845)
chr3 (20-144)||(51694532-51694656)
chr3 (20-138)||(49611260-49611378)
chr3 (20-144)||(3494120-3494244)
chr3 (27-131)||(34646206-34646310)
chr3 (27-129)||(51012271-51012373)
chr3 (28-129)||(27096676-27096777)
chr3 (27-131)||(11377966-11378070)
chr3 (27-131)||(49274547-49274651)
chr3 (27-144)||(50458235-50458355)
chr3 (30-131)||(20374965-20375065)
chr3 (27-131)||(34471046-34471150)
chr3 (27-131)||(44928588-44928692)
chr3 (20-81)||(3497814-3497875)
chr3 (27-131)||(27188201-27188305)
chr3 (27-120)||(14632606-14632699)
chr3 (27-131)||(51016416-51016520)
chr3 (32-131)||(50341432-50341531)
chr3 (103-143)||(24701353-24701393)
chr3 (27-131)||(46413273-46413378)
chr3 (27-131)||(10052342-10052445)
chr3 (27-131)||(30193663-30193767)
[»] scaffold0176 (1 HSPs)
scaffold0176 (20-143)||(2884-3007)
[»] scaffold0618 (1 HSPs)
scaffold0618 (28-144)||(4545-4661)
[»] scaffold0494 (1 HSPs)
scaffold0494 (20-144)||(5820-5944)
[»] scaffold0859 (1 HSPs)
scaffold0859 (27-131)||(1456-1560)
[»] scaffold0589 (1 HSPs)
scaffold0589 (27-131)||(5420-5524)
[»] scaffold0258 (1 HSPs)
scaffold0258 (34-131)||(9610-9707)


Alignment Details
Target: chr8 (Bit Score: 105; Significance: 1e-52; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 40703582 - 40703458
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||    
T  40703582 atcactagaggttgaggaggagcaagaggacatgctatttcgatcctcaaccaaaacaaggtgccccagggactgtagtgtgcaacccgattgacttgtg 40703483  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||| ||||||||||    
T  40703482 tgacgaggaagaattaatgtaatgg 40703458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 28168017 - 28167900
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28168017 gaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccccagggactgtagcgggcaacccgattgacttgtgtgacgag 28167918  T
Q  127 gaagaatgaatgtaatgg 144  Q
    ||||||||||||||||||    
T  28167917 gaagaatgaatgtaatgg 28167900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 42604672 - 42604548
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||  || |||||||||||||||||||||    
T  42604672 atcactcgaggttgaggaggagcgggaggacatgctatttcgatcctcaaccaaaacaaggtgccccagggactccagtgggcaacccgattgacttgtg 42604573  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  42604572 tgacgaggaagaatgaatgtaatgg 42604548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 27 - 143
Target Start/End: Original strand, 41016955 - 41017071
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| || |||| ||||||||||||||||||||||| |||||||||||     
T  41016955 gaggttgaggatgagcaggaggacatgctatttcggtcctcaaccaaaacaaggtaccacagggactgtagcgggcaacccgattgatttgtgtgacgaa 41017054  T
Q  127 gaagaatgaatgtaatg 143  Q
    |||||||||||||||||    
T  41017055 gaagaatgaatgtaatg 41017071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 140
Target Start/End: Complemental strand, 41276296 - 41276176
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||| | |||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||    
T  41276296 atcactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccgcagggactgtagcgggaaacccgattgacttgtg 41276197  T
Q  120 tgacgaggaagaatgaatgta 140  Q
    ||||||||| |||||||||||    
T  41276196 tgacgaggatgaatgaatgta 41276176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 41855976 - 41856100
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||| | | || |||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  41855976 atcactcgaggttgaggaggagcgggaggacatgctattttggttcttaaccaaaacaaggtgccccagggactgtagcgggcaacccgattgatttgtg 41856075  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||| ||||||||||||||||||||    
T  41856076 tgacaaggaagaatgaatgtaatgg 41856100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 484352 - 484476
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||| | ||||||||||||||||||| || |||| |||||||||| ||| |||||||| |||||    
T  484352 atcactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtg 484451  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  484452 tgacgaggaagaatgaatgtaatgg 484476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 15031419 - 15031543
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||| ||||||||||| ||||||||||||||||||| || |||| |||||||||| ||| |||||||| |||||    
T  15031419 atcactcgaggttgaggaggagcgggaggatatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtg 15031518  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  15031519 tgacgaggaagaatgaatgtaatgg 15031543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 24862567 - 24862443
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||  |||||||||||||||| | ||||||||||||||||||||||  ||| ||||||||||| |||||| ||||||||||    
T  24862567 atcactcgaggttgaggaggagtgggaggacatgctattttggtcctcaaccaaaacaaggtgccgtagggactgtagcgggaaacccgtttgacttgtg 24862468  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    ||||||||| |||||||||||||||    
T  24862467 tgacgaggatgaatgaatgtaatgg 24862443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 18439285 - 18439401
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    ||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||| ||| || || | ||| |||||||||||||| ||||||||||    
T  18439285 aggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccctagggacagttgtgggaaacccgattgacttttgtgacgagg 18439384  T
Q  128 aagaatgaatgtaatgg 144  Q
    |||||||||||||||||    
T  18439385 aagaatgaatgtaatgg 18439401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 22550280 - 22550173
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | |||||||||||||||||||||| |||| || |||||||| ||||||||||||||||||||||||    
T  22550280 gaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccgcagggacagtagcgggaaacccgattgacttgtgtgacgag 22550181  T
Q  127 gaagaatg 134  Q
    || |||||    
T  22550180 gatgaatg 22550173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 45065898 - 45065775
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||||||| || || | |||||||||| ||| |||||||| |||||    
T  45065898 atcactcgaggttggggaggagcggaaggacatgctatttcggtcctcaaccaaaacaaggtaccgcatggactgtagcggacaagccgattgatttgtg 45065799  T
Q  120 tgacgaggaagaatgaatgtaatg 143  Q
    ||||||||||||||||||||||||    
T  45065798 tgacgaggaagaatgaatgtaatg 45065775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 44051653 - 44051535
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| ||||||||| |||||| |||||||||||||||| | ||||||| ||||| | ||||||  ||| ||||||||||| |||||||||||||||||    
T  44051653 atcactcgaggttgagaaggagcgggaggacatgctattttggtcctcaatcaaaagagggtgccgtagggactgtagcgggaaacccgattgacttgtg 44051554  T
Q  120 tgacgaggaagaatgaatg 138  Q
    ||||||||| |||||||||    
T  44051553 tgacgaggatgaatgaatg 44051535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 42167923 - 42168026
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    ||||||||||||||| |||||||||||||||| | |||||| ||||||  ||||||||| || ||||| | || |||||| |||||||||||||| ||||    
T  42167923 aggttgaggaggagcgggaggacatgctattttggtcctcagccaaaagcaggtgccccggggactgtcgaggacaacccaattgacttgtgtgatgagg 42168022  T
Q  128 aaga 131  Q
    ||||    
T  42168023 aaga 42168026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 26487680 - 26487576
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | |||||| ||||||  |||||||||||| |||||    | |||||| |||||||||||| | |||    
T  26487680 gaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaagcaggtgccccagggactgtcaatgacaacccaattgacttgtgtcatgag 26487581  T
Q  127 gaaga 131  Q
    |||||    
T  26487580 gaaga 26487576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 38032890 - 38032994
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||| ||||||||| |||||||||||||||| | |||||| ||||||  ||||| ||| || ||||| | || |||||| |||||||||||||| |||    
T  38032890 gaggttaaggaggagcgggaggacatgctattttggtcctcagccaaaagcaggtgtcccggggactgtcgaggacaacccaattgacttgtgtgatgag 38032989  T
Q  127 gaaga 131  Q
    |||||    
T  38032990 gaaga 38032994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 19241648 - 19241741
Alignment:
Q  32 tgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacga 125  Q
    ||||||||||| ||||||||| ||||||   |||||| ||||||  || ||||||||| |||||   || ||||||||||||||||||||||||    
T  19241648 tgaggaggagcgggaggacatactatttttgtcctcacccaaaagcagttgccccagggactgtcaaggacaacccgattgacttgtgtgacga 19241741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 19314832 - 19314925
Alignment:
Q  32 tgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacga 125  Q
    ||||||||||| ||||||||| ||||||   |||||| ||||||  || ||||||||| |||||   || ||||||||||||||||||||||||    
T  19314832 tgaggaggagcgggaggacatactatttttgtcctcacccaaaagcagttgccccagggactgtcaaggacaacccgattgacttgtgtgacga 19314925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 3e-50; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 42683634 - 42683510
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  42683634 atcactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccccagggactgtagcgggcaacccgattgacttgtg 42683535  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    ||| |||||||||||||||||||||    
T  42683534 tgatgaggaagaatgaatgtaatgg 42683510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 48271882 - 48271758
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| ||| |||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  48271882 atcactcgaggttgaggaggagcgggatgacatgctattttggtcctcaaccaaaacaaggtgccccagggactgtagcgggcaacccgattgacttgtg 48271783  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  48271782 tgacgaggaagaatgaatgtaatgg 48271758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 17840430 - 17840306
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| ||||||||||||||||||||||| |||||    
T  17840430 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggcaacccgattgatttgtg 17840331  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  17840330 tgacgaggaagaatgaatgtaatgg 17840306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 41623305 - 41623188
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| | |||||||||||||| | |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  41623305 gaggttgaggaggagcggaaggacatgctattttggtcctcatccaaaacaaggtgccccagggactgtagcgggcaacccgattgacttgtgtgatgag 41623206  T
Q  127 gaagaatgaatgtaatgg 144  Q
    ||||||||||||||||||    
T  41623205 gaagaatgaatgtaatgg 41623188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 9366215 - 9366339
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| |||||||||| ||| |||||||| |||||    
T  9366215 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtg 9366314  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  9366315 tgacgaggaagaatgaatgtaatgg 9366339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 46861173 - 46861297
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| ||| |||||||||||  |||||| ||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  46861173 atcactcgagattgaggaggagtgggaggaaatgctattttggtcctcaaccaaaacaaggtgccccagggactgtagcgggcaacccgattgacttgta 46861272  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  46861273 tgacgaggaagaatgaatgtaatgg 46861297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 28 - 143
Target Start/End: Original strand, 21186280 - 21186395
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    ||||||||||||||| |||||||||| ||||| | ||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||    
T  21186280 aggttgaggaggagcgggaggacatgttattttggtcctcaaccaaaacaaggtgccctagggactgtagcgggcaactcgattgacttgtgtgacgagg 21186379  T
Q  128 aagaatgaatgtaatg 143  Q
    ||||||||||||||||    
T  21186380 aagaatgaatgtaatg 21186395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 34142082 - 34141959
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| ||| |||||||||||| | |||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||    
T  34142082 atcactcgaggttgaggaggagcgggatgacatgctattttggtcctcaaccaaaacaaggtgccacagggactgtagcgggaaacccgattgacttgtg 34141983  T
Q  120 tgacgaggaagaatgaatgtaatg 143  Q
    ||||||||| ||||||||||||||    
T  34141982 tgacgaggaggaatgaatgtaatg 34141959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 28 - 142
Target Start/End: Original strand, 36392807 - 36392921
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    ||||||||||||||| |||||||||| ||||| | |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  36392807 aggttgaggaggagcgggaggacatgttattttggtcctcaaccaaaacaaggtgcctcagggactgtagcgggcaacccgattgacttgtgtgacgagg 36392906  T
Q  128 aagaatgaatgtaat 142  Q
    |||||| ||||||||    
T  36392907 aagaattaatgtaat 36392921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 28978211 - 28978332
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||| ||||| | |||||||| ||||||||| ||| |||| |||||||||||||||||||||||||||||    
T  28978211 atcactcgaggttgaggaggagcgggaggacatgttattttggtcctcaacaaaaacaaggcgccacagggactgtagcgggcaacccgattgacttgtg 28978310  T
Q  120 tgacgaggaagaatgaatgtaa 141  Q
    ||||||||||||||||||||||    
T  28978311 tgacgaggaagaatgaatgtaa 28978332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 36 - 144
Target Start/End: Complemental strand, 34157895 - 34157787
Alignment:
Q  36 gaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgaggaagaatga 135  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||| || |||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  34157895 gaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccacagggactgtagcgggcaacccgattgatttgtgtgacgaggaagaatga 34157796  T
Q  136 atgtaatgg 144  Q
    |||||||||    
T  34157795 atgtaatgg 34157787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 20565870 - 20565746
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| |||||||||| ||| || || || |||||    
T  20565870 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccaatcgatttgtg 20565771  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  20565770 tgacgaggaagaatgaatgtaatgg 20565746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 48194196 - 48194078
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||| | |||||||||||||||||||||| |||| ||| ||||||| |||| ||||||||||||    
T  48194196 atcactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccgcagggactatagcgggaaacctgattgacttgtg 48194097  T
Q  120 tgacgaggaagaatgaatg 138  Q
    ||||||||| |||||||||    
T  48194096 tgacgaggatgaatgaatg 48194078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 40589968 - 40589850
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||| | || ||||||||||||||||||| |||| || ||||| || |||||||||||||||||    
T  40589968 atcactcgaggttgaggaggagcgggaggacatgctattttggtcatcaaccaaaacaaggtgccgcagggaccgtagcaggaaacccgattgacttgtg 40589869  T
Q  120 tgacgaggaagaatgaatg 138  Q
    ||||||||| |||||||||    
T  40589868 tgacgaggatgaatgaatg 40589850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 42504353 - 42504477
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||| ||||| || |||| |||||||||| ||| || ||||| |||||    
T  42504353 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaagaaggtaccgcagggactgtagcggacaagccaattgatttgtg 42504452  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    ||||||||||||||||  |||||||    
T  42504453 tgacgaggaagaatgacagtaatgg 42504477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 45362271 - 45362389
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||| | ||||||||||||| |||||||| || | |||||||| || || ||||||||||||||    
T  45362271 atcactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaagaaggtgccgcaaggactgtagcaggaaatccgattgacttgtg 45362370  T
Q  120 tgacgaggaagaatgaatg 138  Q
    ||||||||| |||||||||    
T  45362371 tgacgaggatgaatgaatg 45362389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 10225294 - 10225177
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| || ||| ||||||||| | | |||||||||||||||||||| |||  | |||||||| |||||||||||||||||||||||||    
T  10225294 gaggttgaggaggagcggggggaaatgctattttggttctcaaccaaaacaaggtgcctcagagattgtagcggccaacccgattgacttgtgtgacgag 10225195  T
Q  127 gaagaatgaatgtaatgg 144  Q
    ||||||||||| ||||||    
T  10225194 gaagaatgaatataatgg 10225177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 28113391 - 28113495
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||| ||||| | |||||||||||||||||||||| |||| ||||||||||||||||||| | || | |||||||||    
T  28113391 gaggttgaggaggagcgggaggacatgttattttggtcctcaaccaaaacaaggtgccacagggactgtagcgggcaacccgagtaacctttgtgacgag 28113490  T
Q  127 gaaga 131  Q
    |||||    
T  28113491 gaaga 28113495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 4230696 - 4230593
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    |||| |||||||||| |||||||||||||||| |||||||||||||||  |||||||||||| ||||| | || |||||| |||||||||||||||||||    
T  4230696 aggtggaggaggagcgggaggacatgctattttgatcctcaaccaaaagcaggtgccccagggactgtcgaggacaacccaattgacttgtgtgacgagg 4230597  T
Q  128 aaga 131  Q
    ||||    
T  4230596 aaga 4230593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 1641667 - 1641771
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||| ||||| | ||||||||||||| ||||||||||||||||||  | || ||| ||  |||||||||||||||||    
T  1641667 gaggttgaggaggagcgggaggacatgttattttggtcctcaaccaaaagaaggtgccccaggaactggcgaggacaatccagttgacttgtgtgacgag 1641766  T
Q  127 gaaga 131  Q
    |||||    
T  1641767 gaaga 1641771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 43350377 - 43350481
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | || ||||||||||  |||||||||||| ||||| | || |||||| |||||||||||||| |||    
T  43350377 gaggttgaggaggagcgggaggacatgctattttggtcttcaaccaaaagcaggtgccccagggactgtcgaggacaacccaattgacttgtgtgatgag 43350476  T
Q  127 gaaga 131  Q
    |||||    
T  43350477 gaaga 43350481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 20877009 - 20877107
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacga 125  Q
    |||||| ||||||||| |||||||||||||||| | |||||||||||||  |||||||||||| ||||| | || |||||||||||| |||||||||||    
T  20877009 gaggtttaggaggagcgggaggacatgctattttggtcctcaaccaaaagcaggtgccccagggactgtcgaggacaacccgattgaattgtgtgacga 20877107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 22292070 - 22291966
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | |||| | ||||||  |||||||||||| ||||| | || |||||  |||||||||||||| |||    
T  22292070 gaggttgaggaggagcgggaggacatgctattttggtcctgagccaaaagcaggtgccccagggactgtcgaggacaacctaattgacttgtgtgatgag 22291971  T
Q  127 gaaga 131  Q
    |||||    
T  22291970 gaaga 22291966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 42736214 - 42736111
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||| ||||||||||| | |||||| ||||||  ||||| |||||| ||||| | || |||||| |||||||||||||| |||    
T  42736214 gaggttgaggaggagcgggagaacatgctattttggtcctcagccaaaagcaggtg-cccagggactgtcgaggacaacccaattgacttgtgtgatgag 42736116  T
Q  127 gaaga 131  Q
    |||||    
T  42736115 gaaga 42736111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 15900391 - 15900495
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||| ||||||||||  |||||| ||||||||| | ||||||  |||||  |||||||||||| ||||| | || |||||||||| || |||||||||||    
T  15900391 gaggctgaggaggagtgggaggatatgctattttggtcctcagtcaaaagcaggtgccccagggactgtcgaggacaacccgattaacctgtgtgacgag 15900490  T
Q  127 gaaga 131  Q
    |||||    
T  15900491 gaaga 15900495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 3380049 - 3380101
Alignment:
Q  32 tgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgcc 84  Q
    ||||||||||| |||||||||||||||| | |||||||||||||  |||||||    
T  3380049 tgaggaggagcgggaggacatgctattttggtcctcaaccaaaagcaggtgcc 3380101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 17184423 - 17184320
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||| | | |||| | ||||||  |||||||||| | | ||| | || |||||| |||||||||||||| | |    
T  17184423 gaggttgaggaggagcgggaggacatgctatattg-tccttagccaaaagcaggtgccccatggattgtcgaggacaacccaattgacttgtgtgatgcg 17184325  T
Q  127 gaaga 131  Q
    |||||    
T  17184324 gaaga 17184320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 3e-50; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 6281501 - 6281625
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  6281501 atcactcgaggttgaggaggagcaggaggacatgctattttgatcctcaatcaaaacaaggtgccccagggactttagcgggcaacccgattgacttgtg 6281600  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||| ||||||    
T  6281601 tgacgaggaagaatgaatataatgg 6281625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 20 - 140
Target Start/End: Complemental strand, 56140124 - 56140004
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  56140124 atcactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccccagggactgtagcgggcaacccgattgacttgtg 56140025  T
Q  120 tgacgaggaagaatgaatgta 140  Q
    ||||||||| |||||||||||    
T  56140024 tgacgaggatgaatgaatgta 56140004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 27 - 144
Target Start/End: Original strand, 34152269 - 34152386
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | |||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  34152269 gaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaatcaaggtgccccagggactgtagcgggcaacccggttgacttgtgtgacgag 34152368  T
Q  127 gaagaatgaatgtaatgg 144  Q
    ||||||||||||||||||    
T  34152369 gaagaatgaatgtaatgg 34152386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 6176413 - 6176537
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| |||||||||| ||| |||||||| |||||    
T  6176413 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtg 6176512  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  6176513 tgacgaggaagaatgaatgtaatgg 6176537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 21016275 - 21016399
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| |||||||||| ||| |||||||| |||||    
T  21016275 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtg 21016374  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  21016375 tgacgaggaagaatgaatgtaatgg 21016399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 49095854 - 49095730
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| |||||||||| ||| |||||||| |||||    
T  49095854 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtg 49095755  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  49095754 tgacgaggaagaatgaatgtaatgg 49095730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 27 - 144
Target Start/End: Original strand, 51427184 - 51427302
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttc-gatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacga 125  Q
    |||||||||||||||| ||||||||||||||||  | |||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||    
T  51427184 gaggttgaggaggagcgggaggacatgctatttttggtcctcaaccaaaacaaggcgccccagggactatagcgggcaacccgattgacttgtgtgacga 51427283  T
Q  126 ggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||    
T  51427284 ggaagaatgaatgtaatgg 51427302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 37867681 - 37867557
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||| ||||| | |||||||| |||||||||||||||||| |||||||||||| |||| |||||||||||    
T  37867681 atcactcgaggttgaggaggagcgggaggacatgttattttggtcctcaacaaaaacaaggtgccccagggactgtagcgggcgacccaattgacttgtg 37867582  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||| ||||||||||||||    
T  37867581 tgacgaggaataatgaatgtaatgg 37867557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 27 - 143
Target Start/End: Original strand, 44559310 - 44559426
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | |||||||||||| |||||||||||||  |||||||||||||||||| |||||||||||||||||    
T  44559310 gaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaatcaaggtgccccagagactgtagcgggcaacccgtttgacttgtgtgacgag 44559409  T
Q  127 gaagaatgaatgtaatg 143  Q
    | |||||||||||||||    
T  44559410 gcagaatgaatgtaatg 44559426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 28 - 143
Target Start/End: Original strand, 956438 - 956553
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    ||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||| |||||||| |||||| || ||| ||||||||||||||    
T  956438 aggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccccagggactgtagcaggcaactcgtttggcttgtgtgacgagg 956537  T
Q  128 aagaatgaatgtaatg 143  Q
    ||||||||||||||||    
T  956538 aagaatgaatgtaatg 956553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 34528796 - 34528914
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||| | |||||||||||||||||||||| |||| | ||||||||| |||||||||||||||||    
T  34528796 atcactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccgcagggattgtagcgggaaacccgattgacttgtg 34528895  T
Q  120 tgacgaggaagaatgaatg 138  Q
    ||||||||| |||||||||    
T  34528896 tgacgaggatgaatgaatg 34528914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 39589990 - 39589872
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||  ||| ||||||||||| |||||||||||||||||    
T  39589990 atcacttgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccgtagggactgtagcgggaaacccgattgacttgtg 39589891  T
Q  120 tgacgaggaagaatgaatg 138  Q
    ||||||||| |||||||||    
T  39589890 tgacgaggatgaatgaatg 39589872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 27 - 144
Target Start/End: Original strand, 40352881 - 40352998
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||  |||||||||| ||| |||||||| ||||||||||||    
T  40352881 gaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagcgactgtagcggacaagccgattgatttgtgtgacgag 40352980  T
Q  127 gaagaatgaatgtaatgg 144  Q
    ||||||||||||||||||    
T  40352981 gaagaatgaatgtaatgg 40352998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 55797852 - 55797728
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || || | |||||||||| ||| || ||||| |||||    
T  55797852 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcatggactgtagcggacaagccaattgatttgtg 55797753  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  55797752 tgacgaggaagaatgaatgtaatgg 55797728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 1043954 - 1043836
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| ||||||||||||||||  ||| ||||||||||| | |||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||    
T  1043954 atcactcgaggttgaggaggagcgagagaacatgctattttggtcctcaaccaaaacaaggtgccgcagggactgtagcgggaaacccgattgacttgtg 1043855  T
Q  120 tgacgaggaagaatgaatg 138  Q
    ||||||||| |||||||||    
T  1043854 tgacgaggatgaatgaatg 1043836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 20 - 140
Target Start/End: Complemental strand, 9490696 - 9490576
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||| | |||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||     
T  9490696 atcactcgaggttgaggaggagctggaggacatgctattttggtcctcagccaaaacaaggtgccccagggactatagcgggcaacccgattgacttgtc 9490597  T
Q  120 tgacgaggaagaatgaatgta 140  Q
    ||| ||||| ||||| |||||    
T  9490596 tgatgaggatgaatggatgta 9490576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 41793900 - 41794024
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||| | ||||||||||||||||||| || |||| |||||||||| ||| || || || |||||    
T  41793900 atcactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccaatcgatttgtg 41793999  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  41794000 tgacgaggaagaatgaatgtaatgg 41794024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 28 - 143
Target Start/End: Complemental strand, 49572323 - 49572208
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    ||||||||||||||| ||| |||||||||||| | ||||||||||||||||||||||  ||| | ||||| | |||||||||||||||||||||||||||    
T  49572323 aggttgaggaggagcgggatgacatgctattttggtcctcaaccaaaacaaggtgccatagggattgtagtgtgcaacccgattgacttgtgtgacgagg 49572224  T
Q  128 aagaatgaatgtaatg 143  Q
    ||||||||||||||||    
T  49572223 aagaatgaatgtaatg 49572208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 27 - 144
Target Start/End: Original strand, 49422741 - 49422854
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||  |||||||||||||||| | ||||||||||||||||||||||||| | ||| |||||||||||||    |||||||||||||||    
T  49422741 gaggttgaggaggagtgggaggacatgctattttggtcctcaaccaaaacaaggtgccccaaggactttagcgggcaaccc----gacttgtgtgacgag 49422836  T
Q  127 gaagaatgaatgtaatgg 144  Q
    ||||||||||||||||||    
T  49422837 gaagaatgaatgtaatgg 49422854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 4784326 - 4784430
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| || ||||||||||||| | ||||||||||||| || |||||||||| |||||||||||||||| |||| || |||||||||||    
T  4784326 gaggttgaggaggagcggggggacatgctattttggtcctcaaccaaaagaatgtgccccagggactgtagcgggcaacctgattaacctgtgtgacgag 4784425  T
Q  127 gaaga 131  Q
    |||||    
T  4784426 gaaga 4784430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 42887503 - 42887399
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||| ||||| | ||||||||||||| |||||||||||   ||||||||||| ||||||||| || |||||||||||    
T  42887503 gaggttgaggaggagcgggaggacatgttattttggtcctcaaccaaaagaaggtgccccaatgactgtagcgggaaacccgattaacctgtgtgacgag 42887404  T
Q  127 gaaga 131  Q
    |||||    
T  42887403 gaaga 42887399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 49816399 - 49816497
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacga 125  Q
    |||||||||||||||| |||||||||||||||| | |||||| ||||||  |||||||| ||| ||||| | || ||||||||||||||||||||||||    
T  49816399 gaggttgaggaggagctggaggacatgctattttggtcctcagccaaaagcaggtgccctagggactgtcgaggacaacccgattgacttgtgtgacga 49816497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 36775468 - 36775572
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | |||||| ||||||  |||||||||||| || || | || |||||| |||||||||||||| |||    
T  36775468 gaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaagcaggtgccccagggaccgtcgaggacaacccaattgacttgtgtgatgag 36775567  T
Q  127 gaaga 131  Q
    |||||    
T  36775568 gaaga 36775572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 21410963 - 21411066
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    ||||||||||| ||| |||||||||||||||| | |||||||||||||  ||||||| |||| ||||  | || |||||| |||||||||||||||||||    
T  21410963 aggttgaggagaagcgggaggacatgctattttggtcctcaaccaaaagcaggtgccacagggactggcgaggacaacccaattgacttgtgtgacgagg 21411062  T
Q  128 aaga 131  Q
    ||||    
T  21411063 aaga 21411066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 2774243 - 2774140
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | || ||||||||||  ||||||||| || ||||| | || |||||| |||||||||||||| |||    
T  2774243 gaggttgaggaggagcgggaggacatgctattttggtcttcaaccaaaagcaggtgcccc-gggactgtcgaggacaacccaattgacttgtgtgatgag 2774145  T
Q  127 gaaga 131  Q
    |||||    
T  2774144 gaaga 2774140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 21170703 - 21170599
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| | |||||||||||||| | |||||| ||||||  ||||||||| || ||||| | || |||||| |||||||||||||| |||    
T  21170703 gaggttgaggaggagcggaaggacatgctattttggtcctcagccaaaagcaggtgcccccgggactgtcgaggacaacccaattgacttgtgtgatgag 21170604  T
Q  127 gaaga 131  Q
    |||||    
T  21170603 gaaga 21170599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 49790915 - 49791019
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||| ||||| | |||||| ||||||  |||||||||||| ||||| | |  |||||| |||||||||||||| |||    
T  49790915 gaggttgaggaggagcgggaggacatgatattttggtcctcagccaaaagcaggtgccccagggactgtcgagaacaacccaattgacttgtgtgatgag 49791014  T
Q  127 gaaga 131  Q
    |||||    
T  49791015 gaaga 49791019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 51026774 - 51026878
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| ||| |||||||||||| | |||||| ||||||  |||||||||||| |||||   || |||||| |||||||||||||| |||    
T  51026774 gaggttgaggaggagcgggatgacatgctattttggtcctcagccaaaagcaggtgccccagggactgtcaaggacaacccaattgacttgtgtgatgag 51026873  T
Q  127 gaaga 131  Q
    |||||    
T  51026874 gaaga 51026878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 32 - 131
Target Start/End: Original strand, 4910624 - 4910723
Alignment:
Q  32 tgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgaggaaga 131  Q
    |||||| |||| |||||||||||||||| | |||||| ||||||  |||||||| ||| ||||| | || |||||| |||||||||||||||||||||||    
T  4910624 tgaggaagagcgggaggacatgctattttggtcctcatccaaaagcaggtgccctagggactgtcgaggacaacccaattgacttgtgtgacgaggaaga 4910723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 21412483 - 21412380
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    ||||||||||| ||| |||||||||||||||| | |||||||||||||  ||||||| | || ||||  | || |||||| |||||||||||||||||||    
T  21412483 aggttgaggagaagcgggaggacatgctattttggtcctcaaccaaaagcaggtgcctctgggactggcgaggacaacccaattgacttgtgtgacgagg 21412384  T
Q  128 aaga 131  Q
    ||||    
T  21412383 aaga 21412380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 24076348 - 24076245
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    ||||||||||||||| | ||||| || ||||||| |||||||||||||  |||||||||||| ||| | | || |||||| |||| ||||||||||||||    
T  24076348 aggttgaggaggagcggaaggacttgttatttcggtcctcaaccaaaagcaggtgccccaggcactctcgaggacaacccaattgtcttgtgtgacgagg 24076249  T
Q  128 aaga 131  Q
    ||||    
T  24076248 aaga 24076245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 25145751 - 25145652
Alignment:
Q  32 tgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgaggaaga 131  Q
    ||||||||||| | |||||||| ||||||| |||||||||||||  |||||| ||||| ||||| | || |||||| |||||||| ||||||||||||||    
T  25145751 tgaggaggagcggaaggacatgttatttcggtcctcaaccaaaagcaggtgcgccagggactgtcgaggacaacccaattgacttatgtgacgaggaaga 25145652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 43888476 - 43888574
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacga 125  Q
    |||||||||||||||| |||||||||||||||| |  ||||| ||||||  |||||||||||| |||||   || ||| ||||||||||||||||||||    
T  43888476 gaggttgaggaggagcgggaggacatgctattttggccctcagccaaaagcaggtgccccagggactgtcaaggacaatccgattgacttgtgtgacga 43888574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 45940765 - 45940661
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | |||||| ||||||  |||||||| ||  ||||| | || |||| | |||||||||||||| ||     
T  45940765 gaggttgaggaggagcgggaggacatgctatttgggtcctcagccaaaagcaggtgccctagagactgtcgaggacaactcaattgacttgtgtgatgac 45940666  T
Q  127 gaaga 131  Q
    |||||    
T  45940665 gaaga 45940661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 9718475 - 9718377
Alignment:
Q  32 tgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgaggaaga 131  Q
    ||||||||||  |||||||||||||||| | |||||| ||||| || ||||| ||||| ||||| | || |||||| |||||||||||||||||| ||||    
T  9718475 tgaggaggagtgggaggacatgctattttggtcctcagccaaagca-ggtgctccagggactgtcgaggacaacccaattgacttgtgtgacgagaaaga 9718377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 17292886 - 17292831
Alignment:
Q  32 tgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgcccca 87  Q
    |||||||||||||||||||||||||||| | |||||||| ||||  ||||||||||    
T  17292886 tgaggaggagcaggaggacatgctattttggtcctcaacaaaaagcaggtgcccca 17292831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 1e-49; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 18974533 - 18974418
Alignment:
Q  29 ggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagga 128  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  18974533 ggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtgccccagggactgtagcggacaacccgattgacttgtgtgacgagga 18974434  T
Q  129 agaatgaatgtaatgg 144  Q
    ||||||||||||||||    
T  18974433 agaatgaatgtaatgg 18974418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 13974149 - 13974033
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    ||||||||||||||  |||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  13974149 aggttgaggaggagatggaggacatgctattttgttcctcaaccaaaacaaggtgccccagggactgtagcgggcaacccgattaacttgtgtgacgagg 13974050  T
Q  128 aagaatgaatgtaatgg 144  Q
    |||||||||||||||||    
T  13974049 aagaatgaatgtaatgg 13974033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 35525172 - 35525295
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||    
T  35525172 atcactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccccagggaatgtagcgggcaa-ccgattgacttgtg 35525270  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  35525271 tgacgaggaagaatgaatgtaatgg 35525295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 27 - 143
Target Start/End: Original strand, 42570773 - 42570889
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | |||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  42570773 gaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgcctcagggactgtagagggcaacccgattgacttgtgtgacgag 42570872  T
Q  127 gaagaatgaatgtaatg 143  Q
    |||||||||||||||||    
T  42570873 gaagaatgaatgtaatg 42570889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 46142438 - 46142554
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    ||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||    
T  46142438 aggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgcccctgggactgtagcgggcaacccgattgacttgtgtgatgagg 46142537  T
Q  128 aagaatgaatgtaatgg 144  Q
    |||||||||||||||||    
T  46142538 aagaatgaatgtaatgg 46142554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 49925424 - 49925548
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||| ||||||| |||||||||| ||||||| ||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||    
T  49925424 atcactcgaggttgacgaggagcgggaggacatgttatttcggtcctcaaccaaaacaaggtgccttagggactgtagcgggcaacccgattgacttgtg 49925523  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  49925524 tgacgaggaagaatgaatgtaatgg 49925548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 27485698 - 27485821
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||| ||||||||||  |||||||||||||||||    
T  27485698 atcactcgaggttgaggaggagcaggaggacatgctattttggtcctcaaccaaaacaaggtgccgcagg-actgtagcggaaaacccgattgacttgtg 27485796  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    ||||||||| |||||||||||||||    
T  27485797 tgacgaggatgaatgaatgtaatgg 27485821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 41803450 - 41803333
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||| ||||| | |||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||| ||    
T  41803450 gaggttgaggaggagcgggaggacatgttattttggtcctcaaccaaaacaaggtgtcccaaggactgtagcgggcaacccgattgacttgtgtgacaag 41803351  T
Q  127 gaagaatgaatgtaatgg 144  Q
    ||||||||||||||||||    
T  41803350 gaagaatgaatgtaatgg 41803333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 48227735 - 48227618
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    ||||||||||||||||  ||||||||||||||| | ||||||||||||||||||| || |||| ||||||||||||||||||||||| ||||||||||||    
T  48227735 gaggttgaggaggagcgagaggacatgctattttggtcctcaaccaaaacaaggtaccgcagggactgtagcgggcaacccgattgatttgtgtgacgag 48227636  T
Q  127 gaagaatgaatgtaatgg 144  Q
    ||||||||||||||||||    
T  48227635 gaagaatgaatgtaatgg 48227618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 51271033 - 51270916
Alignment:
Q  21 tcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgt 120  Q
    ||||| |||||||||||||||| |||||||||||||||| | |||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||    
T  51271033 tcactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccgcagggactgtagcgggaaacccgattgacttgtgt 51270934  T
Q  121 gacgaggaagaatgaatg 138  Q
    |||||||| |||||||||    
T  51270933 gacgaggatgaatgaatg 51270916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 13634394 - 13634518
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||| ||| |||||||||||||||||| ||||||||||||||||||| || |||| |||||||||| ||| |||||||| |||||    
T  13634394 atcactcgaggttgaggagtagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtg 13634493  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  13634494 tgacgaggaagaatgaatgtaatgg 13634518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 29437164 - 29437041
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| || ||||||||||||| |||||||||| ||||| | ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  29437164 atcactcgaagttgaggaggagcgggaggacatgttattttggtcctcaaccaaaacaaggtgccc-agggactgtagcgggcaacccgattgacttgtg 29437066  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||| ||||||||||||||||||    
T  29437065 tgacgaagaagaatgaatgtaatgg 29437041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 49428570 - 49428446
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| ||||||| |||||||||| |||| |||||    
T  49428570 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagtgggcaacccggttgatttgtg 49428471  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||| ||||||    
T  49428470 tgacgaggaagaatgaatataatgg 49428446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 30 - 144
Target Start/End: Complemental strand, 26494679 - 26494565
Alignment:
Q  30 gttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgaggaa 129  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||    
T  26494679 gttgaggaggagcgggaggacatgctattttggtcctcaaccaaaagaaggtgctccagggactgtagcgggcaacccgattgacttgtatgacgaggaa 26494580  T
Q  130 gaatgaatgtaatgg 144  Q
    || ||||||||||||    
T  26494579 gactgaatgtaatgg 26494565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 29761155 - 29761273
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||| | |||||||||||||||||||||| |||| ||||||||||| | |||||||| ||||||    
T  29761155 atcactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccgcagggactgtagcgggaatcccgattggcttgtg 29761254  T
Q  120 tgacgaggaagaatgaatg 138  Q
    ||||||||| |||||||||    
T  29761255 tgacgaggatgaatgaatg 29761273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 144
Target Start/End: Original strand, 24363051 - 24363166
Alignment:
Q  29 ggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagga 128  Q
    |||||||||||||  |||||| ||||||||| | ||||||||||||| ||||||| ||||| ||||||| |||||||| |||||||||||||||||||||    
T  24363051 ggttgaggaggagtgggaggatatgctattttggtcctcaaccaaaagaaggtgctccagggactgtagtgggcaacctgattgacttgtgtgacgagga 24363150  T
Q  129 agaatgaatgtaatgg 144  Q
    ||||||||||||||||    
T  24363151 agaatgaatgtaatgg 24363166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 137
Target Start/End: Complemental strand, 36911104 - 36910995
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    ||||||||| |||||| |||||||||||||||| | ||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||| ||||||    
T  36911104 gaggttgagaaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccccagggactgtagc-ggcaacccggttgacttgtgcgacgag 36911006  T
Q  127 gaagaatgaat 137  Q
    |||||||||||    
T  36911005 gaagaatgaat 36910995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 49397870 - 49397753
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    ||||||||||| |||| ||||||||| |||||| | || || ||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||     
T  49397870 gaggttgaggatgagcgggaggacatactattttggtcatcgaccaaaacacggtgccccaaggactgtagcgggcaacccgattgacttgtgtgacgat 49397771  T
Q  127 gaagaatgaatgtaatgg 144  Q
    ||||||||||||||||||    
T  49397770 gaagaatgaatgtaatgg 49397753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 6436940 - 6436846
Alignment:
Q  31 ttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacga 125  Q
    |||||||||||| |||||||||||||||| | ||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||    
T  6436940 ttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacatggtgccccagggattgtagcgggcaacccgattgacttgtgtgacga 6436846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 23343741 - 23343637
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | |||||||||||||  |||||||||||| | ||| | || |||||| |||||||||||||| |||    
T  23343741 gaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaagcaggtgccccagggattgtcgaggacaacccaattgacttgtgtgatgag 23343642  T
Q  127 gaaga 131  Q
    |||||    
T  23343641 gaaga 23343637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 35585888 - 35585992
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | |||||| ||||||  |||||||||||| ||||| | || |||||| |||||||||||||| |||    
T  35585888 gaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaagcaggtgccccagggactgtcgaggacaacccaattgacttgtgtgatgag 35585987  T
Q  127 gaaga 131  Q
    |||||    
T  35585988 gaaga 35585992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 37779370 - 37779266
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||  |||||||||||||||| | |||||| ||||||  |||||||||||| ||||| | || |||||| |||||||||||||| |||    
T  37779370 gaggttgaggaggagtgggaggacatgctattttggtcctcagccaaaagcaggtgccccagggactgtcgaggacaacccaattgacttgtgtgatgag 37779271  T
Q  127 gaaga 131  Q
    |||||    
T  37779270 gaaga 37779266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 39856229 - 39856333
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    ||||||||||||||||||||||||||||||||| | |||||| ||||||  |||||||||||| ||||| |  |  ||||| |||||||||||||| |||    
T  39856229 gaggttgaggaggagcaggaggacatgctattttggtcctcagccaaaagcaggtgccccagggactgtcgaagaaaacccaattgacttgtgtgatgag 39856328  T
Q  127 gaaga 131  Q
    |||||    
T  39856329 gaaga 39856333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 15355770 - 15355874
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | |||||| ||||||  |||| ||||||| ||| | | || |||||| |||||||||||||| |||    
T  15355770 gaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaagcaggtaccccagggactatcgaggacaacccaattgacttgtgtgatgag 15355869  T
Q  127 gaaga 131  Q
    |||||    
T  15355870 gaaga 15355874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 17685315 - 17685419
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | |||||| ||||||  |||||||| ||| ||||| | |  |||||| |||||||||||||| |||    
T  17685315 gaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaagcaggtgccctagggactgtcgagtacaacccaattgacttgtgtgatgag 17685414  T
Q  127 gaaga 131  Q
    |||||    
T  17685415 gaaga 17685419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 26634190 - 26634249
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgcccc 86  Q
    |||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||    
T  26634190 gaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgcccc 26634249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 144
Target Start/End: Complemental strand, 13284675 - 13284564
Alignment:
Q  36 gaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgaggaa---gaa 132  Q
    |||||||  ||||||||||||||| | |||||||  ||||  | |||||| ||| ||||||||||||||||||||||| |||||||| ||||||   |||    
T  13284675 gaggagcgagaggacatgctattttggtcctcaatgaaaagcaagtgcccaagggactgtagcgggcaacccgattgatttgtgtgatgaggaagatgaa 13284576  T
Q  133 tgaatgtaatgg 144  Q
    ||||||||||||    
T  13284575 tgaatgtaatgg 13284564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 44336893 - 44336974
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcggg 101  Q
    |||||| |||||||| ||| ||| |||||||||||||||| | |||||||||||| ||||||||| |||| |||||||||||    
T  44336893 atcactcgaggttgaagagaagcgggaggacatgctattttggtcctcaaccaaatcaaggtgccgcagggactgtagcggg 44336974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 14172742 - 14172802
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgcccca 87  Q
    |||||||||||||||| |||||||||||||||| | ||||||||||||| |||||||||||    
T  14172742 gaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaagaaggtgcccca 14172802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 38044190 - 38044294
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| ||||||||||||||||   |||||||||||||  ||||||| |||| ||||| |  | |||||| |||||| ||||||| |||    
T  38044190 gaggttgaggaggagcgggaggacatgctatttttgtcctcaaccaaaagcaggtgcctcagggactgtcgacgacaacccaattgacctgtgtgatgag 38044289  T
Q  127 gaaga 131  Q
    |||||    
T  38044290 gaaga 38044294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 49260665 - 49260769
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    ||||||||||| |||| | |||||||||||||| | |||||| ||||||  |||| ||||||| ||||| | || |||||| |||||||||||||| |||    
T  49260665 gaggttgaggatgagcggaaggacatgctattttggtcctcagccaaaagcaggtaccccagggactgtcgaggacaacccaattgacttgtgtgatgag 49260764  T
Q  127 gaaga 131  Q
    |||||    
T  49260765 gaaga 49260769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 32 - 131
Target Start/End: Original strand, 16531181 - 16531280
Alignment:
Q  32 tgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgaggaaga 131  Q
    ||||||||||  |||||||||||||||| |||||||||||||||  |||||||||| | ||||| | || |||||| ||||| ||  |||||||||||||    
T  16531181 tgaggaggagtgggaggacatgctattttgatcctcaaccaaaagcaggtgccccaaggactgtcgaggacaacccaattgagttcagtgacgaggaaga 16531280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 12790273 - 12790354
Alignment:
Q  44 ggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacga 125  Q
    |||||||||||||||| | |||||| ||||||  |||||||||||| ||||| | || ||||||||||| ||||||||||||    
T  12790273 ggaggacatgctattttggtcctcagccaaaagcaggtgccccagggactgtcgaggacaacccgattgccttgtgtgacga 12790354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 24269353 - 24269457
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | |||||  ||||||  |||||||| ||| ||||| | || || | | |||||||||||||| |||    
T  24269353 gaggttgaggaggagcgggaggacatgctattttggtcctcggccaaaagcaggtgccctagggactgtcgaggacagctcaattgacttgtgtgatgag 24269452  T
Q  127 gaaga 131  Q
    |||||    
T  24269453 gaaga 24269457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 35186225 - 35186121
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||| ||||||||||| | | |||| ||||||  | |||||||||| ||||| | || |||||| |||||||||||| | |||    
T  35186225 gaggttgaggaggagcgggagaacatgctattttggttctcagccaaaagcaagtgccccagggactgtcgaggacaacccaattgacttgtgtcatgag 35186126  T
Q  127 gaaga 131  Q
    |||||    
T  35186125 gaaga 35186121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 40532366 - 40532461
Alignment:
Q  30 gttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacga 125  Q
    ||||||||||||| ||||||||||||||||   |||||| ||||||  ||||||| |||| || || | || |||| |||||||||||||||||||    
T  40532366 gttgaggaggagcgggaggacatgctatttttgtcctcagccaaaagcaggtgcctcagggaccgtcgaggacaactcgattgacttgtgtgacga 40532461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 31451459 - 31451543
Alignment:
Q  47 ggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgaggaaga 131  Q
    ||||||||||||| | |||||||||||||  | ||||||| || ||||| | || |||||| ||||||||||||||| |||||||    
T  31451459 ggacatgctattttggtcctcaaccaaaagcaagtgccccggggactgttgaggacaacccaattgacttgtgtgacaaggaaga 31451543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 35492751 - 35492634
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  35492751 gaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccccagggactgtagtgggcaacccgattgacttgtgtgacgag 35492652  T
Q  127 gaagaatgaatgtaatgg 144  Q
    ||||||||||||||||||    
T  35492651 gaagaatgaatgtaatgg 35492634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 19470607 - 19470723
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    ||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  19470607 aggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccctagggactgtagcgggcaacccgattgacttgtgtgacgagg 19470706  T
Q  128 aagaatgaatgtaatgg 144  Q
    |||||||||||||||||    
T  19470707 aagaatgaatgtaatgg 19470723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 27 - 143
Target Start/End: Original strand, 2918349 - 2918465
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| | ||||||| |||||||||| |||||||||||||||||    
T  2918349 gaggttgaggaggagcaggaggacatgctattttggtcctcaaccaaaacaaggtgccccatggactgtagtgggcaacccggttgacttgtgtgacgag 2918448  T
Q  127 gaagaatgaatgtaatg 143  Q
    |||||||||||||||||    
T  2918449 gaagaatgaatgtaatg 2918465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 16583036 - 16582913
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||| | |||||||| |||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  16583036 atcactcgaggttgaggaggagcgggaggacatgctattttggtcctcaacaaaaacaaggtgccctagggactgtagagggcaacccgattgacttgtg 16582937  T
Q  120 tgacgaggaagaatgaatgtaatg 143  Q
    ||||||||||||||||||||||||    
T  16582936 tgacgaggaagaatgaatgtaatg 16582913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 28 - 143
Target Start/End: Original strand, 41498104 - 41498219
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||     
T  41498104 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtgccccagggactgtagcggccaacccgattgacttgtgtgacaagt 41498203  T
Q  128 aagaatgaatgtaatg 143  Q
    ||||||||||||||||    
T  41498204 aagaatgaatgtaatg 41498219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 3936399 - 3936523
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| |||||||||| ||| |||||||| |||||    
T  3936399 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtg 3936498  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  3936499 tgacgaggaagaatgaatgtaatgg 3936523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 22002938 - 22002814
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| |||||||||| ||| |||||||| |||||    
T  22002938 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtg 22002839  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  22002838 tgacgaggaagaatgaatgtaatgg 22002814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 43983838 - 43983714
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| |||||||||| ||| |||||||| |||||    
T  43983838 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtg 43983739  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  43983738 tgacgaggaagaatgaatgtaatgg 43983714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 28476618 - 28476494
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| |||||||||| ||| || ||||| |||||    
T  28476618 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccaattgatttgtg 28476519  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  28476518 tgacgaggaagaatgaatgtaatgg 28476494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 39798963 - 39799087
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| | |||||||||||||| |||||||||||||||||| ||||||||||||||||||| || ||||||||||||||| ||| | |||||| |||||    
T  39798963 atcactcgcggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcaggaactgtagcggacaagcagattgatttgtg 39799062  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  39799063 tgacgaggaagaatgaatgtaatgg 39799087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 23408936 - 23408824
Alignment:
Q  31 ttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgaggaag 130  Q
    |||||||||||| |||||||||||||||| | |||||||||||| |||||| ||||||| | |||||||||||||||||||||||||||||| |||||||    
T  23408936 ttgaggaggagcgggaggacatgctattttggtcctcaaccaaatcaaggtaccccagggattgtagcgggcaacccgattgacttgtgtgatgaggaag 23408837  T
Q  131 aatgaatgtaatg 143  Q
    |||||||||||||    
T  23408836 aatgaatgtaatg 23408824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 28 - 143
Target Start/End: Complemental strand, 43492678 - 43492563
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    ||||||| ||||||  |||||||||||||||| | ||||||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||||||||    
T  43492678 aggttgacgaggagtgggaggacatgctattttggtcctcaaccaaaacaaggtgccccagtgactgtaacggacaacccgattgacttgtgtgacgagg 43492579  T
Q  128 aagaatgaatgtaatg 143  Q
    ||||||||||||||||    
T  43492578 aagaatgaatgtaatg 43492563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 17425902 - 17425778
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||  ||||||||||||||||||| || |||| |||||||||| ||| || || || |||||    
T  17425902 atcactcgaggttgaggaggagcgggaggacatgctatttcagtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccaatcgatttgtg 17425803  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  17425802 tgacgaggaagaatgaatgtaatgg 17425778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 40676404 - 40676520
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    ||||||||||||||| ||||||||||||||||   |||| || ||||||||||||||||| | |||||||| |||||||||||| ||||||||||| |||    
T  40676404 aggttgaggaggagcgggaggacatgctattttcgtccttaatcaaaacaaggtgccccatggactgtagcaggcaacccgattcacttgtgtgactagg 40676503  T
Q  128 aagaatgaatgtaatgg 144  Q
    |||||||||||||||||    
T  40676504 aagaatgaatgtaatgg 40676520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 3942613 - 3942495
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||| ||||||||| | |||||||| ||||||||||||  || | ||||||||||| |||||||||||||||||    
T  3942613 atcacttgaggttgaggaggagcgggaggatatgctattttggtcctcaactaaaacaaggtgcggcatggactgtagcgggaaacccgattgacttgtg 3942514  T
Q  120 tgacgaggaagaatgaatg 138  Q
    ||||||| | |||||||||    
T  3942513 tgacgagaatgaatgaatg 3942495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 33404975 - 33404871
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| | |||||||||||||| | |||||||||||||  |||||||||||| ||||| | |||||||||||||||||||||||| |||    
T  33404975 gaggttgaggaggagcggtaggacatgctattttggtcctcaaccaaaagtaggtgccccagggactgtcgagggcaacccgattgacttgtgtgaggag 33404876  T
Q  127 gaaga 131  Q
    |||||    
T  33404875 gaaga 33404871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 27 - 121
Target Start/End: Original strand, 37311626 - 37311720
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtg 121  Q
    |||||||| ||||||| |||||||||||||||| |||||||| ||||||  |||||||||||| ||||| | || ||||||||||||||||||||    
T  37311626 gaggttgatgaggagcgggaggacatgctattttgatcctcagccaaaagtaggtgccccagggactgtcgaggacaacccgattgacttgtgtg 37311720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 6978056 - 6977952
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | |||||||||||||  |||||||| ||| ||||| | || |||||| ||||| |||||||| |||    
T  6978056 gaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaagcaggtgcccaagggactgtcgaggacaacccaattgatttgtgtgatgag 6977957  T
Q  127 gaaga 131  Q
    |||||    
T  6977956 gaaga 6977952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 15890958 - 15891060
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    ||||||||||||||| | |||||||||||||| | |||||||||||||  |||||||||||| ||||| |  | |||||| |||||||||||||| ||||    
T  15890958 aggttgaggaggagcggaaggacatgctattttggtcctcaaccaaaagcaggtgccccagggactgtcg-agacaacccaattgacttgtgtgatgagg 15891056  T
Q  128 aaga 131  Q
    ||||    
T  15891057 aaga 15891060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 5421362 - 5421258
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| | || ||||||||||| | |||||| ||||||  |||||||||||| ||| | | || |||||| |||||||||||||| |||    
T  5421362 gaggttgaggaggagcggcagaacatgctattttggtcctcagccaaaagcaggtgccccagggactctcgaggacaacccaattgacttgtgtgatgag 5421263  T
Q  127 gaaga 131  Q
    |||||    
T  5421262 gaaga 5421258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 17537894 - 17537998
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | |||||| ||||||  ||||| ||||   ||||| | || |||||| |||||||||||||| |||    
T  17537894 gaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaaacaggtgtcccatagactgtcgaggacaacccaattgacttgtgtgatgag 17537993  T
Q  127 gaaga 131  Q
    |||||    
T  17537994 gaaga 17537998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 16413259 - 16413362
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| ||| |||||| ||||| | || ||||||||||  ||||||  |||| ||||  | || |||||||||||||||||||||||||    
T  16413259 gaggttgaggaggagcgggaagacatgttattttggtc-tcaaccaaaagcaggtgctgcagggactggcgaggacaacccgattgacttgtgtgacgag 16413357  T
Q  127 gaaga 131  Q
    |||||    
T  16413358 gaaga 16413362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 34520701 - 34520805
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | || ||| ||||||  |||||||| ||| || || | || || ||| |||||||||||||| |||    
T  34520701 gaggttgaggaggagcgggaggacatgctattttggtcttcagccaaaagcaggtgcccgagggaccgtcgaggacatcccaattgacttgtgtgatgag 34520800  T
Q  127 gaaga 131  Q
    |||||    
T  34520801 gaaga 34520805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 24107754 - 24107858
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    ||||||||||||||||  ||||| ||||||||| | |||||| ||||||  ||||| || | | ||||| | || |||||| ||||||||||||||  ||    
T  24107754 gaggttgaggaggagcgagaggaaatgctattttggtcctcagccaaaagcaggtgtcctatggactgttgaggacaacccaattgacttgtgtgagaag 24107853  T
Q  127 gaaga 131  Q
    |||||    
T  24107854 gaaga 24107858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 8e-48; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 13616877 - 13617001
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  13616877 atcactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccccagggactgtagcgagcaacccgattgacttgtg 13616976  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||| ||||||||||||||||||||    
T  13616977 tgacaaggaagaatgaatgtaatgg 13617001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 27 - 143
Target Start/End: Original strand, 32026608 - 32026724
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| || ||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  32026608 gaggttgaggaggagcgggtggacatgctattttggtcctcaaccaaaacaaggtgccccagggactgtagcgggcaacccgattgacttgtgtgatgag 32026707  T
Q  127 gaagaatgaatgtaatg 143  Q
    |||||||||||||||||    
T  32026708 gaagaatgaatgtaatg 32026724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 27 - 143
Target Start/End: Original strand, 32036667 - 32036783
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| || ||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  32036667 gaggttgaggaggagcgggtggacatgctattttggtcctcaaccaaaacaaggtgccccagggactgtagcgggcaacccgattgacttgtgtgatgag 32036766  T
Q  127 gaagaatgaatgtaatg 143  Q
    |||||||||||||||||    
T  32036767 gaagaatgaatgtaatg 32036783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 13404034 - 13403917
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    ||||||||||||||||  ||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| |||    
T  13404034 gaggttgaggaggagcgagaggacatgctatttcggtcctcaaccaaaaaaaggtgccccagggactgtagcgggcaacccgatagacttgtgtgaagag 13403935  T
Q  127 gaagaatgaatgtaatgg 144  Q
    ||||||||||||||||||    
T  13403934 gaagaatgaatgtaatgg 13403917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 6206597 - 6206473
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| |||||||||| ||| |||||||| |||||    
T  6206597 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtg 6206498  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  6206497 tgacgaggaagaatgaatgtaatgg 6206473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 11693564 - 11693440
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| |||||||||| ||| |||||||| |||||    
T  11693564 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtg 11693465  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  11693464 tgacgaggaagaatgaatgtaatgg 11693440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 27 - 143
Target Start/End: Original strand, 34802168 - 34802284
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| ||||||||||||||||   ||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||    
T  34802168 gaggttgaggaggagcgggaggacatgctatttttgtcctcaaccaaaacaaggtgccccagggactgtagcaggcaacccggttgacttgtgtgacgag 34802267  T
Q  127 gaagaatgaatgtaatg 143  Q
    |||||||||||||||||    
T  34802268 gaagaatgaatgtaatg 34802284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 144
Target Start/End: Original strand, 32691694 - 32691811
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| |||||||||| ||| |||||||| ||||||||||||    
T  32691694 gaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtgtgacgag 32691793  T
Q  127 gaagaatgaatgtaatgg 144  Q
    ||||||||||||||||||    
T  32691794 gaagaatgaatgtaatgg 32691811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 27641287 - 27641163
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| |||||||||| ||| || ||||| |||||    
T  27641287 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccaattgatttgtg 27641188  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  27641187 tgacgaggaagaatgaatgtaatgg 27641163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 35020248 - 35020356
Alignment:
Q  35 ggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgaggaagaatg 134  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||||||| ||| ||||||| || |||||||||||||||||||||||||||||||||    
T  35020248 ggaggagcgggaggacatgttatttcggtcctcaaccaaaacaaggtgccctagggactgtagtgg-caacccgattgacttgtgtgacgaggaagaatg 35020346  T
Q  135 aatgtaatgg 144  Q
    ||||||||||    
T  35020347 aatgtaatgg 35020356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 29067705 - 29067587
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| ||||||||||| |||| |||||||||||||||| | |||||||||||||||||||||| ||||  |||||||||  |||||||||||||||||    
T  29067705 atcactcgaggttgaggatgagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccgcaggggctgtagcggaaaacccgattgacttgtg 29067606  T
Q  120 tgacgaggaagaatgaatg 138  Q
    |||| |||| |||||||||    
T  29067605 tgacaaggatgaatgaatg 29067587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 29109294 - 29109176
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| ||||||||||| |||| |||||||||||||||| | |||||||||||||||||||||| ||||  |||||||||  |||||||||||||||||    
T  29109294 atcactcgaggttgaggatgagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccgcaggggctgtagcggaaaacccgattgacttgtg 29109195  T
Q  120 tgacgaggaagaatgaatg 138  Q
    |||| |||| |||||||||    
T  29109194 tgacaaggatgaatgaatg 29109176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 143
Target Start/End: Complemental strand, 14123931 - 14123812
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||| ||||||||  ||||||||||||| || | |||| || |||||  ||||||| |||| |||||||||||||||||||||||||||||||||||     
T  14123931 gaggttaaggaggagtgggaggacatgctactttggtccttaatcaaaagtaggtgccgcagggactgtagcgggcaacccgattgacttgtgtgacgat 14123832  T
Q  127 gaa---gaatgaatgtaatg 143  Q
    |||   ||||||||||||||    
T  14123831 gaagatgaatgaatgtaatg 14123812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 20241340 - 20241440
Alignment:
Q  31 ttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgaggaag 130  Q
    ||||||||||||||||||  ||||||||| | |||||||||||||  |||| ||| ||| ||||| | || |||||| ||||||||||||||||||||||    
T  20241340 ttgaggaggagcaggaggttatgctattttggtcctcaaccaaaagcaggttcccaagggactgttgaggacaacccaattgacttgtgtgacgaggaag 20241439  T
Q  131 a 131  Q
    |    
T  20241440 a 20241440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 22135324 - 22135424
Alignment:
Q  31 ttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgaggaag 130  Q
    ||||||||||||||||||  ||||||||| | |||||||||||||  |||| ||| ||| ||||| | || |||||| ||||||||||||||||||||||    
T  22135324 ttgaggaggagcaggaggttatgctattttggtcctcaaccaaaagcaggttcccaagggactgttgaggacaacccaattgacttgtgtgacgaggaag 22135423  T
Q  131 a 131  Q
    |    
T  22135424 a 22135424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 22142677 - 22142777
Alignment:
Q  31 ttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgaggaag 130  Q
    ||||||||||||||||||  ||||||||| | |||||||||||||  |||| ||| ||| ||||| | || |||||| ||||||||||||||||||||||    
T  22142677 ttgaggaggagcaggaggttatgctattttggtcctcaaccaaaagcaggttcccaagggactgttgaggacaacccaattgacttgtgtgacgaggaag 22142776  T
Q  131 a 131  Q
    |    
T  22142777 a 22142777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 12398019 - 12397916
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||| ||||| | |||||| ||||||  ||||| |||||| ||||| | || |||||| |||||||||||||| |||    
T  12398019 gaggttgaggaggagcgggaggacatgatattttggtcctcagccaaaagcaggtg-cccagggactgtcgaggacaacccaattgacttgtgtgatgag 12397921  T
Q  127 gaaga 131  Q
    |||||    
T  12397920 gaaga 12397916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 30763971 - 30764068
Alignment:
Q  32 tgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgaggaa 129  Q
    ||||||||||| | | |||||| ||||||| |||||||||||||    |||||||| | ||||| | || |||||| |||||||||||||||||||||    
T  30763971 tgaggaggagcggaatgacatgttatttcggtcctcaaccaaaagcgagtgccccatggactgtcgaggacaacccaattgacttgtgtgacgaggaa 30764068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 32133671 - 32133772
Alignment:
Q  45 gaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgaggaa---gaatgaatgtaa 141  Q
    ||||||||||||||| | |||||| ||||||  |||| ||||||| ||||| |  | ||||| ||||||| ||||||||||||||   ||||||||||||    
T  32133671 gaggacatgctattttggtcctcagccaaaagcaggttccccagggactgtcgatgacaacctgattgacctgtgtgacgaggaagatgaatgaatgtaa 32133770  T
Q  142 tg 143  Q
    ||    
T  32133771 tg 32133772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 33201500 - 33201401
Alignment:
Q  32 tgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgaggaaga 131  Q
    |||||| |||| | |||||||| ||| ||| |||||||||||||  |||||| ||||| | ||| | || |||||  |||||||||||||||||||||||    
T  33201500 tgaggaagagcggaaggacatgttatatcggtcctcaaccaaaatcaggtgcgccagggaatgtcgaggacaacctaattgacttgtgtgacgaggaaga 33201401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 17464487 - 17464550
Alignment:
Q  32 tgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgt 95  Q
    ||||||||||| |||||||||| ||||| | |||||||||||||  ||||| |||||| |||||    
T  17464487 tgaggaggagcgggaggacatgttattttggtcctcaaccaaaagcaggtgtcccagggactgt 17464550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 8e-48; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 8539087 - 8538963
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||  ||| ||||||||||||||||||||||| |||||    
T  8539087 atcactcgaggttgaggaggagcaggaggacatgctatttcggtcctcaaccaaaacaaggtaccgtagggactgtagcgggcaacccgattgatttgtg 8538988  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  8538987 tgacgaggaagaatgaatgtaatgg 8538963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 27 - 144
Target Start/End: Original strand, 34682913 - 34683030
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | ||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||    
T  34682913 gaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggttccccagggactgtagcgggcaactcgattgacttgtgtgacgag 34683012  T
Q  127 gaagaatgaatgtaatgg 144  Q
    ||||||||||||||||||    
T  34683013 gaagaatgaatgtaatgg 34683030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 20199562 - 20199451
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    ||||||||||||||| |||||||||||||||| | |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  20199562 aggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaagtgccccagggactgtagcgggcaacccgattgacttgtgtgacgagg 20199463  T
Q  128 aagaatgaatgt 139  Q
    ||||||||||||    
T  20199462 aagaatgaatgt 20199451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 11028558 - 11028434
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| |||||||||| ||| |||||||| |||||    
T  11028558 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtg 11028459  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  11028458 tgacgaggaagaatgaatgtaatgg 11028434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 18309482 - 18309366
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    ||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||| ||| ||||||||||||||||||||||  |||||||||||||    
T  18309482 aggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgcccaagggactgtagcgggcaacccgattgcattgtgtgacgagg 18309383  T
Q  128 aagaatgaatgtaatgg 144  Q
    |||||||||||||||||    
T  18309382 aagaatgaatgtaatgg 18309366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 11347911 - 11347788
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| ||||||||||||||||||||||| |||||    
T  11347911 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggcaacccgattgatttgtg 11347812  T
Q  120 tgacgaggaagaatgaatgtaatg 143  Q
    | ||||||||||||||||| ||||    
T  11347811 ttacgaggaagaatgaatgcaatg 11347788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 1399288 - 1399404
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    ||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||| | |||||||  ||||||| ||||||||||||||||||    
T  1399288 aggttgaggaggagcgggaggacatgctattttgatcctcaatcaaaacaaggtgccccagggattgtagcgaacaacccggttgacttgtgtgacgagg 1399387  T
Q  128 aagaatgaatgtaatgg 144  Q
    |||||||||||||||||    
T  1399388 aagaatgaatgtaatgg 1399404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 3602563 - 3602448
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    ||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||| ||| |||||||||| ||| ||||||||||||||||||||||    
T  3602563 aggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccc-agggactgtagcggacaatccgattgacttgtgtgacgagg 3602465  T
Q  128 aagaatgaatgtaatgg 144  Q
    |||||||||||||||||    
T  3602464 aagaatgaatgtaatgg 3602448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 8575240 - 8575364
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| ||| |||||| ||| |||||||| |||||    
T  8575240 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactatagcggacaagccgattgatttgtg 8575339  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  8575340 tgacgaggaagaatgaatgtaatgg 8575364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 25499303 - 25499187
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    |||| |||||||||| ||||||||| |||||| | ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  25499303 aggtggaggaggagcgggaggacatactattttggtcctcaaccaaaacaaggtgccccaaggactgtagcgggcaacccgattgacttgtgtgacgagg 25499204  T
Q  128 aagaatgaatgtaatgg 144  Q
    | |||||||||||||||    
T  25499203 atgaatgaatgtaatgg 25499187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 38855265 - 38855141
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||| ||||||| ||||||||||||||||||| || |||| |||||||||| ||| |||||||| |||||    
T  38855265 atcactcgaggttgaggaggagcgggaggacatgttatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtg 38855166  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  38855165 tgacgaggaagaatgaatgtaatgg 38855141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 35566494 - 35566377
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||| |||||  ||||||||||||||| | |||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||    
T  35566494 gaggttgaggcggagcgtgaggacatgctattttggtcctcaaccaaaacaaggtgcctcagggactgtagcggccaacccgattgacttgtgtgacgag 35566395  T
Q  127 gaagaatgaatgtaatgg 144  Q
    ||||| ||||||||||||    
T  35566394 gaagattgaatgtaatgg 35566377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 6329 - 6453
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| ||||||||||  || || ||||| |||||    
T  6329 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggttaagcctattgatttgtg 6428  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  6429 tgacgaggaagaatgaatgtaatgg 6453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 19035774 - 19035898
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| |||||||||| ||| || || || |||||    
T  19035774 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccaatcgatttgtg 19035873  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  19035874 tgacgaggaagaatgaatgtaatgg 19035898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 27660476 - 27660599
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| |||||| ||| ||| |||||||| |||||    
T  27660476 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtatcggacaagccgattgatttgtg 27660575  T
Q  120 tgacgaggaagaatgaatgtaatg 143  Q
    ||||||| ||||||||||||||||    
T  27660576 tgacgagaaagaatgaatgtaatg 27660599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 144
Target Start/End: Original strand, 35927066 - 35927181
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | ||||||||||||| ||||||||||||| ||  ||||||| |||||||||| |||||||||| ||    
T  35927066 gaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaagaaggtgccccagggac--tagcgggaaacccgattggcttgtgtgaccag 35927163  T
Q  127 gaagaatgaatgtaatgg 144  Q
    ||||||||||||||||||    
T  35927164 gaagaatgaatgtaatgg 35927181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 30710710 - 30710587
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| ||||||||||||||||  ||||||||| ||||||| ||||| ||||||||||||| |  |||| |||||||||| ||| || ||||| |||||    
T  30710710 atcactcgaggttgaggaggagcgagaggacatgttatttcggtcctcgaccaaaacaaggtactgcagggactgtagcggacaagccaattgatttgtg 30710611  T
Q  120 tgacgaggaagaatgaatgtaatg 143  Q
    |||||||||||||| |||||||||    
T  30710610 tgacgaggaagaataaatgtaatg 30710587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 7484478 - 7484582
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | |||||| ||||||  |||||||||||| ||||| | ||  ||||| |||||||||||||| |||    
T  7484478 gaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaagcaggtgccccagggactgtcgaggataacccaattgacttgtgtgatgag 7484577  T
Q  127 gaaga 131  Q
    |||||    
T  7484578 gaaga 7484582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 1696032 - 1695934
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacga 125  Q
    |||||||||||||||| |||||||||||||||| |  ||||| ||||||  |||||||||| | ||||| | || ||||||||||||||||||||||||    
T  1696032 gaggttgaggaggagcgggaggacatgctattttggccctcagccaaaagcaggtgccccaaggactgtcgaggacaacccgattgacttgtgtgacga 1695934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 1972601 - 1972506
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtga 122  Q
    |||||||||||||||| |||||||||||||||| | ||||||| |||||  |||||||||||| ||||| | || ||| || ||||||||||||||    
T  1972601 gaggttgaggaggagcgggaggacatgctattttggtcctcaagcaaaagcaggtgccccagggactgtcgaggacaaaccaattgacttgtgtga 1972506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 7400930 - 7400831
Alignment:
Q  32 tgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgaggaaga 131  Q
    ||||||||||| | |||||||| ||||||| |||||||||||||  ||||||| || | ||||| | || |||||| |||||||||||||||||||||||    
T  7400930 tgaggaggagcggaaggacatgttatttcggtcctcaaccaaaatcaggtgcctcaaggactgtcgaggacaacccaattgacttgtgtgacgaggaaga 7400831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 6792432 - 6792536
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | |||||| ||||||  || ||||| ||| ||||| | || |||||| |||||||||||||| |||    
T  6792432 gaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaagcagatgccctagggactgtcgaggacaacccaattgacttgtgtgatgag 6792531  T
Q  127 gaaga 131  Q
     ||||    
T  6792532 caaga 6792536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 36349289 - 36349386
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacga 125  Q
    ||||||||||| |||| |||||||||||| ||| | |||||| ||||||  |||||| ||||| ||||| | || ||||||||||||||| ||||||||    
T  36349289 gaggttgaggaagagcgggaggacatgctttttgg-tcctcagccaaaagcaggtgctccagggactgtcgaggacaacccgattgacttatgtgacga 36349386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 4723076 - 4723124
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaa 75  Q
    |||||||||||||||| |||||||||||||||| | |||||| ||||||    
T  4723076 gaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaa 4723124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 127
Target Start/End: Complemental strand, 10978509 - 10978414
Alignment:
Q  32 tgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    ||||||||||| | ||||| || ||||| | |||||||||||||  |||| ||||||||||||  | || |||||| ||||| || ||||||||||    
T  10978509 tgaggaggagcggaaggacttgttattttggtcctcaaccaaaagcaggttccccaggaactgacgaggacaacccaattgaattttgtgacgagg 10978414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 31239224 - 31239140
Alignment:
Q  32 tgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgactt 116  Q
    ||||||||||  | |||||||||||||| | |||||||||||||  | |||||| ||| ||||| | || |||||| ||||||||    
T  31239224 tgaggaggagtggaaggacatgctattttggtcctcaaccaaaagcacgtgccctagggactgtggaggacaacccaattgactt 31239140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 8e-48; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 55268057 - 55268181
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  55268057 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctgaaccaaaacaaggtgccccagggactctagtgggcaacccgattgacttgtg 55268156  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  55268157 tgacgaggaagaatgaatgtaatgg 55268181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 2429708 - 2429584
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| ||||||||| |||||| ||| |||||||||||| | ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  2429708 atcactcgaggttgagcaggagcgggaagacatgctattttggtcctcaaccaaaacaaggtgccccagggactatagcgggcaacccgattgacttgtg 2429609  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  2429608 tgacgaggaagaatgaatgtaatgg 2429584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 27 - 144
Target Start/End: Original strand, 55205926 - 55206042
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||    
T  55205926 gaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtgccccagggactgtagtgggcaacctgattgacttgtgtgacgag 55206025  T
Q  127 gaagaatgaatgtaatgg 144  Q
    |||| |||||||||||||    
T  55206026 gaag-atgaatgtaatgg 55206042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 2267581 - 2267705
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| ||||||||||| || |||||||| |||||    
T  2267581 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtg 2267680  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  2267681 tgacgaggaagaatgaatgtaatgg 2267705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 46406128 - 46406004
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| |||||||||| ||| |||||||| |||||    
T  46406128 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtg 46406029  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  46406028 tgacgaggaagaatgaatgtaatgg 46406004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 52568417 - 52568541
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||| ||||||||||| |||| |||||||||||||||||||||||| ||||||| ||||||| |||||||||||||    
T  52568417 atcactcgaggttgaggaggagcgggagcacatgctattttgatcatcaaccaaaacaaggtgccccagggactgtagtgggcaacacgattgacttgtg 52568516  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||| ||||||||||||||||||||    
T  52568517 tgacaaggaagaatgaatgtaatgg 52568541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 54391565 - 54391441
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| |||||||||| ||| |||||||| |||||    
T  54391565 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtg 54391466  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  54391465 tgacgaggaagaatgaatgtaatgg 54391441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 49139150 - 49139273
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| |||||||||| ||| |||||||| |||||    
T  49139150 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtg 49139249  T
Q  120 tgacgaggaagaatgaatgtaatg 143  Q
    ||||||||||||||||||||||||    
T  49139250 tgacgaggaagaatgaatgtaatg 49139273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 7247275 - 7247158
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccagg-aactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||  ||||||||||||||| | ||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||    
T  7247275 aggttgaggaggagcgagaggacatgctattttggtcctcaaccaaaacaaggtgccccagggaaatatagcgggcaacccgattgacttgtgtgacgag 7247176  T
Q  127 gaagaatgaatgtaatgg 144  Q
    ||||||||||||||||||    
T  7247175 gaagaatgaatgtaatgg 7247158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 43571099 - 43570982
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | ||||| |||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  43571099 gaggttgaggaggagcgggaggacatgctattttggtcctcgaccaaatcaaggtgcctcagggactgtagcgggcaacccgattgacttgtgtgacgag 43571000  T
Q  127 gaagaatgaatgtaatgg 144  Q
    ||||||||||||| ||||    
T  43570999 gaagaatgaatgtgatgg 43570982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 144
Target Start/End: Original strand, 45099454 - 45099571
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    ||||||||||| |||| |||||||||| ||||| | ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  45099454 gaggttgaggatgagcgggaggacatgttattttggtcctcaaccaaaacaaggtgcaccagggactgtagcgggcaacccgattgacttttgtgacgag 45099553  T
Q  127 gaagaatgaatgtaatgg 144  Q
    ||||||||||||||||||    
T  45099554 gaagaatgaatgtaatgg 45099571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 2645980 - 2646096
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| |||||||||| ||| |||||||| |||||||||||||    
T  2645980 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtgtgacgagg 2646079  T
Q  128 aagaatgaatgtaatgg 144  Q
    |||||||||||||||||    
T  2646080 aagaatgaatgtaatgg 2646096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 4003250 - 4003374
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| | |||||||||||||||| ||||||||||||||||||| || |||| ||||||||||||||||||||||| ||||     
T  4003250 atcactcgaggttgaggaggagcggaaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggcaacccgattgatttgtc 4003349  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||| ||||||||||||||||||    
T  4003350 tgacgacgaagaatgaatgtaatgg 4003374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 34050850 - 34050726
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||| ||||||| ||||||||||||||||||| || |||| |||||||||| ||| |||||||| |||||    
T  34050850 atcactcgaggttgaggaggagcgggaggacatgttatttcggtcctcaaccaaaacaaggtaccacagggactgtagcggacaagccgattgatttgtg 34050751  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  34050750 tgacgaggaagaatgaatgtaatgg 34050726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 36136137 - 36136014
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||  ||| || |||||||||||||||||||| |||||    
T  36136137 atcactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgaagggac-gtagcgggcaacccgattgatttgtg 36136039  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  36136038 tgacgaggaagaatgaatgtaatgg 36136014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 41579141 - 41579025
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    ||||||||||||||| ||| |||||||||||| | ||||||||||||||||||||||||||  ||| |||||||||||| ||||||||||||||||||||    
T  41579141 aggttgaggaggagcgggaagacatgctattttggtcctcaaccaaaacaaggtgccccagtgactatagcgggcaacctgattgacttgtgtgacgagg 41579042  T
Q  128 aagaatgaatgtaatgg 144  Q
    |||||||||||||||||    
T  41579041 aagaatgaatgtaatgg 41579025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 46345591 - 46345707
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    ||||||||||| ||| |||||||||||||||||| |||||||| |||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  46345591 aggttgaggagcagcgggaggacatgctatttcggtcctcaacaaaaacaaggtgccccatggactgtagcgggcaactcgattgacttgtgtgacgagg 46345690  T
Q  128 aagaatgaatgtaatgg 144  Q
    || ||||||||||||||    
T  46345691 aataatgaatgtaatgg 46345707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 34692280 - 34692403
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| ||||||||||||| || | |||||||||||||||||||||| | || ||||||||||| |||||||||||||||||    
T  34692280 atcactcgaggttgaggaggagcgggaggacatgctactttggtcctcaaccaaaacaaggtgccgcggggactgtagcgggaaacccgattgacttgtg 34692379  T
Q  120 tgacgaggaagaatgaatgtaatg 143  Q
    ||||||||| ||||||||||||||    
T  34692380 tgacgaggatgaatgaatgtaatg 34692403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 27 - 144
Target Start/End: Original strand, 13894890 - 13895006
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | |||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||| ||    
T  13894890 gaggttgaggaggagcgggaggacatgctattttggtcctcaacaaaaacaaggtgccccagggattgtag-gggcaacccgattgacttgtgtgacaag 13894988  T
Q  127 gaagaatgaatgtaatgg 144  Q
    ||||||||||||||||||    
T  13894989 gaagaatgaatgtaatgg 13895006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 43478251 - 43478134
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||| | ||||||||||||||| |||||| |||| ||||||||||| |||||||||||||||||    
T  43478251 atcactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacagggtgccgcagggactgtagcgggaaacccgattgacttgtg 43478152  T
Q  120 tgacgaggaagaatgaat 137  Q
    ||||||||| ||||||||    
T  43478151 tgacgaggatgaatgaat 43478134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 49217725 - 49217845
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| ||| |||||||||||| | |||||||||||||||||||||| |||| ||||||||||| ||||||||| |||||||    
T  49217725 atcactcgaggttgaggaggagcgggaagacatgctattttggtcctcaaccaaaacaaggtgccgcagggactgtagcgggaaacccgattaacttgtg 49217824  T
Q  120 tgacgaggaagaatgaatgta 140  Q
    ||||||||| |||||||||||    
T  49217825 tgacgaggatgaatgaatgta 49217845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 51694532 - 51694656
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||| | |||| ||||||||||||||| | |||| ||||||||||| ||||| |||||||||||    
T  51694532 atcactcgaggttgaggaggagcgggaggacatgctattttgttcctaaaccaaaacaaggtgtcgcagggactgtagcgggaaacccaattgacttgtg 51694631  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    ||||||||| |||||||||||||||    
T  51694632 tgacgaggatgaatgaatgtaatgg 51694656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 49611378 - 49611260
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||| | |||||||||||||||||||||| |||| ||||||||||| |||| ||||||||||||    
T  49611378 atcactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccgcagggactgtagcgggaaacctgattgacttgtg 49611279  T
Q  120 tgacgaggaagaatgaatg 138  Q
    ||||||| | |||||||||    
T  49611278 tgacgagaatgaatgaatg 49611260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 3494120 - 3494244
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||| ||||||||| |||||||||||||||||| ||||||||||||||||||| || |||| ||| |||||| ||| || ||||| || ||    
T  3494120 atcactggaggttcaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactatagcggacaagccaattgatttatg 3494219  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    |||||||||||||||||||||||||    
T  3494220 tgacgaggaagaatgaatgtaatgg 3494244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 34646206 - 34646310
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||  |||||||||||||||| | ||||||||||||| ||||||||| ||| ||||||||||||||||||||| || | |||||||||    
T  34646206 gaggttgaggaggagtgggaggacatgctattttggtcctcaaccaaaagaaggtgccctagggactgtagcgggcaacccgattaacctttgtgacgag 34646305  T
Q  127 gaaga 131  Q
    |||||    
T  34646306 gaaga 34646310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 51012271 - 51012373
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | |||||| ||||||  ||||||||||||||||||   || |||||| |||||||||||||| |||    
T  51012271 gaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaagcaggtgccccaggaactgtcaaggacaacccaattgacttgtgtgatgag 51012370  T
Q  127 gaa 129  Q
    |||    
T  51012371 gaa 51012373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 27096676 - 27096777
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    ||||||||||||||| |||||||||||||||| |   |||||||||||  ||||||||||| |||||| | || |||||| |||||||||||||||||||    
T  27096676 aggttgaggaggagcgggaggacatgctattttggctctcaaccaaaagcaggtgccccagaaactgtcgaggacaacccaattgacttgtgtgacgagg 27096775  T
Q  128 aa 129  Q
    ||    
T  27096776 aa 27096777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 11377966 - 11378070
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | |||||| ||||||  |||||||| ||| ||||| | || |||||| |||||||||||||| |||    
T  11377966 gaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaagcaggtgccctagggactgtcgaggacaacccaattgacttgtgtgatgag 11378065  T
Q  127 gaaga 131  Q
    |||||    
T  11378066 gaaga 11378070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 49274651 - 49274547
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | |||||| ||||||  ||||| |||||| ||||| | || |||||| |||||||||||| |||||    
T  49274651 gaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaagcaggtgtcccagggactgtcgaggacaacccaattgacttgtgttacgag 49274552  T
Q  127 gaaga 131  Q
    |||||    
T  49274551 gaaga 49274547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 144
Target Start/End: Original strand, 50458235 - 50458355
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    ||||||||||| |||| |||||||||||||||| | |||||| ||||||  |||||||||||| ||||| | || |||||| |||||||||||||  |||    
T  50458235 gaggttgaggaagagcgggaggacatgctattttggtcctcagccaaaagcaggtgccccagggactgtcgaggacaacccaattgacttgtgtggtgag 50458334  T
Q  127 gaa---gaatgaatgtaatgg 144  Q
    |||   |||||||||||||||    
T  50458335 gaagatgaatgaatgtaatgg 50458355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 20374965 - 20375065
Alignment:
Q  30 gttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgaggaa 129  Q
    ||||||||||||| |||||||||||||||| | || ||||||||||  | |||||| |||| |||  |||||||||||||||||||| ||||||||||||    
T  20374965 gttgaggaggagcgggaggacatgctattttggtcatcaaccaaaagcaagtgcccaagga-ctgccgcgggcaacccgattgacttatgtgacgaggaa 20375063  T
Q  130 ga 131  Q
    ||    
T  20375064 ga 20375065  T

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Target: chr3; HSP #32
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 34471046 - 34471150
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | |||||| ||||||  |||||||| ||| ||||| | ||  ||||| |||||||||||||| |||    
T  34471046 gaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaagcaggtgccctagggactgtcgaggaaaacccaattgacttgtgtgatgag 34471145  T
Q  127 gaaga 131  Q
    |||||    
T  34471146 gaaga 34471150  T

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Target: chr3; HSP #33
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 44928692 - 44928588
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | |||||| ||||||  |||| ||||||| ||||| | || |||||| ||||| |||||||| |||    
T  44928692 gaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaagcaggttccccagggactgtcgaggacaacccaattgaattgtgtgatgag 44928593  T
Q  127 gaaga 131  Q
    |||||    
T  44928592 gaaga 44928588  T

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Target: chr3; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 3497814 - 3497875
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggt 81  Q
    |||||| |||||| ||||||||| |||||||||||||||||| |||||||||||||||||||    
T  3497814 atcactggaggttcaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggt 3497875  T

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Target: chr3; HSP #35
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 27188305 - 27188201
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||||| | |||||||  ||||  |  || |||||| ||||| || |||| |||||||||||||||||| |||    
T  27188305 gaggttgaggaggagcgggaggacatgctattttgctcctcaattaaaagcaaatgtcccagggactgtcgcaggcatcccgattgacttgtgtgatgag 27188206  T
Q  127 gaaga 131  Q
    |||||    
T  27188205 gaaga 27188201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 120
Target Start/End: Complemental strand, 14632699 - 14632606
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgt 120  Q
    |||||||||||||||| |||||||||||||||| | |||||| ||||||  |||||||| ||| ||||| | || | |||| ||||||||||||    
T  14632699 gaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaagcaggtgccctagggactgtcgaggacgacccaattgacttgtgt 14632606  T

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Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 51016520 - 51016416
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||| | ||| |||||||||||||| | |||||| ||||||  |||||||||| | ||||| |  | |||||| |||||||||||||| |||    
T  51016520 gaggttgaggagaaacagaaggacatgctattttggtcctcagccaaaagcaggtgccccatggactgtcgaagacaacccaattgacttgtgtgatgag 51016421  T
Q  127 gaaga 131  Q
    |||||    
T  51016420 gaaga 51016416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 131
Target Start/End: Original strand, 50341432 - 50341531
Alignment:
Q  32 tgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgaggaaga 131  Q
    ||||||||||| | |||||||| |||||| ||||| ||||||||  |||||||| ||| ||||| | || ||| || ||||||||||||||| |||||||    
T  50341432 tgaggaggagcggaaggacatgttatttctatcctaaaccaaaagcaggtgccctagggactgtcgaggacaatccaattgacttgtgtgacaaggaaga 50341531  T

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Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 143
Target Start/End: Original strand, 24701353 - 24701393
Alignment:
Q  103 aacccgattgacttgtgtgacgaggaagaatgaatgtaatg 143  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  24701353 aacccgattgacttgtgtgacgaggatgaatgaatgtaatg 24701393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 46413273 - 46413378
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaa-caaggtgcccc-aggaactgtagcgggcaacccgattgacttgtgtgacg 124  Q
    ||||||| |||||||| |||||||||| ||||| |||||||| |||||| || |||||||| ||| ||| | | || |||||| |||||||||||||| |    
T  46413273 gaggttgcggaggagcgggaggacatgatattt-gatcctcagccaaaagcagggtgcccccagggactatcgaggacaacccaattgacttgtgtgatg 46413371  T
Q  125 aggaaga 131  Q
    |||||||    
T  46413372 aggaaga 46413378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 10052342 - 10052445
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| |||||||||||||| | | |||| | ||||||  |||||||||| | | ||| | || |||||| |||||||||||||| | |    
T  10052342 gaggttgaggaggagcgggaggacatgctatattg-tccttagccaaaagcaggtgccccatggattgtcgaggacaacccaattgacttgtgtgatgcg 10052440  T
Q  127 gaaga 131  Q
    |||||    
T  10052441 gaaga 10052445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 30193767 - 30193663
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| || ||||||| | ||| | ||||||  |||||  |||||||||| | ||||| |  | |||||| |||||||||||||| |||    
T  30193767 gaggttgaggaggagcgggtggacatgttgttttggtcctcagtcaaaaacaggtgccccatggactgtcgaagacaacccaattgacttgtgtgatgag 30193668  T
Q  127 gaaga 131  Q
    |||||    
T  30193667 gaaga 30193663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 3007 - 2884
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| ||| |||||||||||| | |||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||    
T  3007 atcactcgaggttgaggaggagcgggatgacatgctattttggtcctcaaccaaaacaaggtgccacagggactgtagcgggaaacccgattgacttgtg 2908  T
Q  120 tgacgaggaagaatgaatgtaatg 143  Q
    ||||||||| ||||||||||||||    
T  2907 tgacgaggaggaatgaatgtaatg 2884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 4545 - 4661
Alignment:
Q  28 aggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgagg 127  Q
    ||||||||||| ||| |||||||||||||||||| |||||||| |||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  4545 aggttgaggagcagcgggaggacatgctatttcggtcctcaacaaaaacaaggtgccccatggactgtagcgggcaactcgattgacttgtgtgacgagg 4644  T
Q  128 aagaatgaatgtaatgg 144  Q
    || ||||||||||||||    
T  4645 aataatgaatgtaatgg 4661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 5820 - 5944
Alignment:
Q  20 atcactagaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtg 119  Q
    |||||| |||||||||||||||| |||||||||||||||| | ||||||||||||| ||||| || |||| |||||||||| ||| |||||||| |||||    
T  5820 atcactcgaggttgaggaggagcgggaggacatgctatttaggtcctcaaccaaaagaaggtaccgcagggactgtagcggacaagccgattgatttgtg 5919  T
Q  120 tgacgaggaagaatgaatgtaatgg 144  Q
    ||||||||||||||||  |||||||    
T  5920 tgacgaggaagaatgacagtaatgg 5944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 1560 - 1456
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||||||||||||| || | |||||||||||| |||||||||||||| |||||||| |||| ||||| | || |||||| ||||||||||||||||||    
T  1560 gaggttgaggaggagcgggtgaacatgctatttctatcctcaaccaaaagaaggtgcctcagggactgtcgaggacaacccaattgacttgtgtgacgag 1461  T
Q  127 gaaga 131  Q
    |||||    
T  1460 gaaga 1456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 5524 - 5420
Alignment:
Q  27 gaggttgaggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgag 126  Q
    |||||| ||||||||  |||||||||||||||| | |||||| ||||||| |||||||||||| ||||| | || |||||| |||||||||||||| |||    
T  5524 gaggttaaggaggagtgggaggacatgctattttggtcctcagccaaaaccaggtgccccagggactgtcgaggacaacccaattgacttgtgtgatgag 5425  T
Q  127 gaaga 131  Q
    |||||    
T  5424 gaaga 5420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 131
Target Start/End: Complemental strand, 9707 - 9610
Alignment:
Q  34 aggaggagcaggaggacatgctatttcgatcctcaaccaaaacaaggtgccccaggaactgtagcgggcaacccgattgacttgtgtgacgaggaaga 131  Q
    ||||||||| | |||||||| ||||| | |||||||||||||  | |||||| ||| ||| | | || |||||| |||||||| ||||| ||||||||    
T  9707 aggaggagcggaaggacatgttattttggtcctcaaccaaaatcatgtgccctagggactatcgaggacaacccaattgacttatgtgaagaggaaga 9610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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