View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11180A_low_66 (Length: 309)
Name: NF11180A_low_66
Description: NF11180A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11180A_low_66 |
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Alignment Details
Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 6 - 297
Target Start/End: Complemental strand, 16834690 - 16834399
Alignment:
| Q |
6 |
atttaatgttgaataatatgtactacatcattgagcaactataaaatttgtaagcattatattatatttccaaccattcacttttatcattaaactaacg |
105 |
Q |
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| T |
16834690 |
atttaatgttgaataatatgtactacatcattgagcaactataaaatttgtaagcattatattatatttccaaccattcacttttatcattaaactaacg |
16834591 |
T |
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| Q |
106 |
tatattggataaaattaaacatcaatttctcagctcttcattttattttttaagcaatttagaatatactgttcctgttattttaggagtcttaacatat |
205 |
Q |
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| T |
16834590 |
tatattggataaaattaaacatcaatttctcagctcttcattttattttttaagcaatttagaatatactgttcctgttattttaggagtcttaacatat |
16834491 |
T |
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| Q |
206 |
caagaatgttacaaaatgttttcttannnnnnnnnataattatcacctatcatttctaaaacatgnnnnnnnngtgacagatacaatatatt |
297 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
16834490 |
caagaatgttacaaaatgttttcttatttttttttataattatcacctatcatttctaaaacatgtcttttttgtgacagatacaatatatt |
16834399 |
T |
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