View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11183_low_14 (Length: 479)

Name: NF11183_low_14
Description: NF11183
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11183_low_14
NF11183_low_14
[»] chr7 (41 HSPs)
chr7 (175-320)||(32884179-32884324)
chr7 (204-320)||(8675739-8675856)
chr7 (207-320)||(29893380-29893493)
chr7 (207-320)||(37972561-37972674)
chr7 (204-320)||(12740778-12740894)
chr7 (216-320)||(41827736-41827840)
chr7 (207-320)||(18838818-18838931)
chr7 (207-320)||(33891918-33892031)
chr7 (207-320)||(37328315-37328428)
chr7 (207-320)||(23101699-23101812)
chr7 (207-320)||(29614479-29614592)
chr7 (219-320)||(33383082-33383183)
chr7 (207-320)||(44256439-44256552)
chr7 (214-320)||(43172115-43172221)
chr7 (207-320)||(510054-510167)
chr7 (207-320)||(7993565-7993678)
chr7 (207-320)||(28034532-28034645)
chr7 (207-320)||(28342719-28342832)
chr7 (207-320)||(29585922-29586035)
chr7 (207-316)||(40460398-40460507)
chr7 (221-320)||(39028495-39028594)
chr7 (210-320)||(44121620-44121730)
chr7 (204-323)||(16709393-16709510)
chr7 (204-323)||(17683629-17683746)
chr7 (204-319)||(42610579-42610694)
chr7 (207-320)||(39784515-39784628)
chr7 (204-285)||(48136909-48136990)
chr7 (207-320)||(3023342-3023455)
chr7 (204-320)||(26201813-26201929)
chr7 (215-322)||(4639908-4640015)
chr7 (216-322)||(27148804-27148910)
chr7 (206-283)||(11735215-11735292)
chr7 (171-280)||(37915886-37915995)
chr7 (204-320)||(14741387-14741503)
chr7 (145-210)||(21486222-21486287)
chr7 (204-280)||(21024067-21024143)
chr7 (204-279)||(14732318-14732393)
chr7 (208-258)||(30823108-30823158)
chr7 (252-319)||(5772106-5772171)
chr7 (204-280)||(33497116-33497192)
chr7 (292-320)||(47067167-47067195)
[»] chr8 (32 HSPs)
chr8 (204-319)||(12522531-12522646)
chr8 (207-320)||(10295017-10295130)
chr8 (207-320)||(31625718-31625831)
chr8 (207-320)||(9288172-9288285)
chr8 (207-320)||(19717552-19717665)
chr8 (204-320)||(43166351-43166467)
chr8 (204-322)||(8029864-8029982)
chr8 (207-320)||(18305654-18305767)
chr8 (207-320)||(18958405-18958518)
chr8 (207-312)||(32497959-32498064)
chr8 (142-321)||(6388074-6388266)
chr8 (207-320)||(26856515-26856628)
chr8 (207-320)||(42305282-42305395)
chr8 (207-320)||(16364116-16364229)
chr8 (175-320)||(24082173-24082318)
chr8 (207-320)||(39467196-39467309)
chr8 (207-317)||(43308186-43308296)
chr8 (207-320)||(14781810-14781923)
chr8 (207-320)||(44725469-44725582)
chr8 (204-279)||(41393958-41394033)
chr8 (215-280)||(24067107-24067172)
chr8 (204-320)||(19484176-19484292)
chr8 (204-319)||(17234676-17234791)
chr8 (146-275)||(27878591-27878729)
chr8 (146-275)||(28018772-28018910)
chr8 (235-319)||(7760770-7760854)
chr8 (217-292)||(7466759-7466834)
chr8 (244-290)||(12522485-12522531)
chr8 (146-277)||(27915535-27915675)
chr8 (146-277)||(27961954-27962094)
chr8 (216-280)||(37131322-37131386)
chr8 (204-280)||(26620369-26620445)
[»] chr1 (47 HSPs)
chr1 (205-320)||(5494772-5494887)
chr1 (204-320)||(45272976-45273092)
chr1 (207-320)||(46328395-46328508)
chr1 (176-320)||(9322153-9322297)
chr1 (146-321)||(47371531-47371715)
chr1 (204-319)||(3583579-3583694)
chr1 (217-320)||(8140919-8141022)
chr1 (204-319)||(28403969-28404084)
chr1 (207-320)||(6312985-6313098)
chr1 (207-320)||(15834710-15834823)
chr1 (207-320)||(25612501-25612614)
chr1 (207-320)||(29396110-29396223)
chr1 (204-320)||(48966514-48966630)
chr1 (215-320)||(38535830-38535935)
chr1 (215-320)||(38558048-38558153)
chr1 (207-320)||(51702004-51702117)
chr1 (244-320)||(25830962-25831038)
chr1 (212-319)||(49971627-49971734)
chr1 (207-320)||(48177118-48177232)
chr1 (204-320)||(49453083-49453200)
chr1 (204-323)||(49236989-49237108)
chr1 (215-321)||(32760133-32760230)
chr1 (204-323)||(52182305-52182424)
chr1 (207-320)||(18798866-18798974)
chr1 (204-309)||(25253486-25253591)
chr1 (204-320)||(35177233-35177350)
chr1 (204-320)||(4005049-4005165)
chr1 (216-320)||(5209403-5209507)
chr1 (204-320)||(26757597-26757713)
chr1 (204-309)||(27257881-27257986)
chr1 (207-280)||(49231456-49231529)
chr1 (204-320)||(1243329-1243445)
chr1 (204-320)||(8147299-8147415)
chr1 (216-320)||(9192006-9192110)
chr1 (204-320)||(41353403-41353519)
chr1 (204-320)||(51106874-51106990)
chr1 (255-320)||(28387141-28387206)
chr1 (204-320)||(3593237-3593344)
chr1 (196-280)||(18954487-18954571)
chr1 (204-280)||(7798522-7798598)
chr1 (204-282)||(1108372-1108450)
chr1 (204-274)||(33886883-33886953)
chr1 (204-274)||(33957297-33957367)
chr1 (216-280)||(2293411-2293475)
chr1 (196-280)||(8122211-8122294)
chr1 (204-280)||(11579123-11579199)
chr1 (207-267)||(42304526-42304586)
[»] chr4 (43 HSPs)
chr4 (207-320)||(49501211-49501324)
chr4 (207-320)||(49507276-49507389)
chr4 (204-326)||(32889851-32889973)
chr4 (210-320)||(32322476-32322586)
chr4 (204-320)||(29510092-29510208)
chr4 (207-320)||(30967021-30967134)
chr4 (207-320)||(5800374-5800487)
chr4 (207-320)||(23987607-23987719)
chr4 (207-320)||(27768474-27768587)
chr4 (207-319)||(28484306-28484419)
chr4 (207-320)||(41725523-41725636)
chr4 (207-320)||(49834512-49834625)
chr4 (207-320)||(50018602-50018715)
chr4 (207-320)||(54341552-54341665)
chr4 (196-319)||(33138771-33138885)
chr4 (207-320)||(48261488-48261601)
chr4 (207-320)||(51321266-51321379)
chr4 (204-320)||(23671400-23671516)
chr4 (207-320)||(5441812-5441925)
chr4 (207-320)||(29855926-29856039)
chr4 (207-320)||(37828108-37828221)
chr4 (217-320)||(54853164-54853267)
chr4 (204-309)||(871782-871886)
chr4 (204-321)||(46286678-46286786)
chr4 (204-320)||(50517163-50517270)
chr4 (216-320)||(55165486-55165590)
chr4 (204-282)||(26491149-26491227)
chr4 (247-320)||(32683746-32683818)
chr4 (244-320)||(37916211-37916287)
chr4 (204-323)||(29469121-29469240)
chr4 (206-319)||(24966547-24966651)
chr4 (204-320)||(8084170-8084286)
chr4 (204-280)||(51967278-51967354)
chr4 (204-281)||(42937437-42937514)
chr4 (196-276)||(41470344-41470424)
chr4 (204-280)||(46862941-46863017)
chr4 (204-280)||(6487344-6487420)
chr4 (222-282)||(40487703-40487763)
chr4 (205-280)||(56424002-56424077)
chr4 (196-282)||(2326680-2326765)
chr4 (282-319)||(12754489-12754526)
chr4 (185-238)||(12754539-12754592)
chr4 (215-280)||(14334395-14334460)
[»] scaffold0110 (1 HSPs)
scaffold0110 (204-312)||(39311-39419)
[»] scaffold1128 (1 HSPs)
scaffold1128 (205-323)||(929-1047)
[»] scaffold0042 (1 HSPs)
scaffold0042 (207-320)||(57743-57856)
[»] chr3 (38 HSPs)
chr3 (207-320)||(52810766-52810879)
chr3 (207-315)||(20833310-20833418)
chr3 (204-320)||(21386508-21386624)
chr3 (166-320)||(48379558-48379721)
chr3 (207-320)||(37455255-37455368)
chr3 (207-320)||(52617651-52617764)
chr3 (207-318)||(17946638-17946749)
chr3 (217-320)||(18750051-18750154)
chr3 (209-319)||(7437600-7437710)
chr3 (207-320)||(31645940-31646053)
chr3 (207-320)||(51737366-51737479)
chr3 (207-320)||(54629259-54629372)
chr3 (216-320)||(44905543-44905647)
chr3 (207-320)||(23753068-23753181)
chr3 (207-320)||(26107737-26107850)
chr3 (207-320)||(39038498-39038611)
chr3 (137-311)||(33693226-33693409)
chr3 (207-320)||(40897539-40897652)
chr3 (235-320)||(50761807-50761892)
chr3 (207-320)||(50902988-50903101)
chr3 (136-277)||(16155168-16155318)
chr3 (205-319)||(43172889-43173003)
chr3 (204-321)||(4962755-4962872)
chr3 (215-320)||(7665552-7665657)
chr3 (204-308)||(45602441-45602545)
chr3 (244-320)||(45863231-45863307)
chr3 (207-320)||(36673831-36673944)
chr3 (204-320)||(49296077-49296193)
chr3 (204-320)||(8598620-8598736)
chr3 (219-319)||(21718452-21718552)
chr3 (205-280)||(25049872-25049947)
chr3 (144-280)||(49458359-49458504)
chr3 (204-320)||(42736268-42736384)
chr3 (207-280)||(22489511-22489584)
chr3 (204-320)||(53835923-53836039)
chr3 (204-282)||(53645337-53645415)
chr3 (204-280)||(9818588-9818664)
chr3 (204-280)||(40064279-40064355)
[»] chr2 (36 HSPs)
chr2 (216-320)||(214945-215049)
chr2 (207-320)||(6224256-6224369)
chr2 (204-321)||(15224190-15224307)
chr2 (207-320)||(28739973-28740086)
chr2 (207-320)||(7027313-7027426)
chr2 (207-320)||(25288573-25288686)
chr2 (204-320)||(34342199-34342315)
chr2 (204-319)||(40829596-40829713)
chr2 (207-320)||(10657840-10657953)
chr2 (207-320)||(28844995-28845108)
chr2 (216-320)||(13833107-13833211)
chr2 (210-320)||(379340-379450)
chr2 (140-309)||(2308665-2308843)
chr2 (207-320)||(33136028-33136139)
chr2 (207-320)||(3575251-3575364)
chr2 (207-320)||(26789195-26789308)
chr2 (142-321)||(31847171-31847360)
chr2 (217-320)||(18177681-18177784)
chr2 (204-321)||(18899952-18900069)
chr2 (255-319)||(3464051-3464115)
chr2 (204-280)||(35404343-35404419)
chr2 (137-265)||(18727595-18727732)
chr2 (204-280)||(3991774-3991850)
chr2 (196-280)||(12877687-12877771)
chr2 (204-280)||(15926379-15926455)
chr2 (214-277)||(11153384-11153447)
chr2 (204-280)||(19948539-19948615)
chr2 (204-280)||(33262854-33262930)
chr2 (204-280)||(38413478-38413554)
chr2 (204-282)||(13898475-13898553)
chr2 (204-282)||(14039092-14039170)
chr2 (216-282)||(32242242-32242308)
chr2 (204-282)||(32293912-32293989)
chr2 (204-309)||(3858446-3858551)
chr2 (244-319)||(43305035-43305111)
chr2 (292-320)||(43825299-43825327)
[»] chr6 (23 HSPs)
chr6 (204-322)||(16438665-16438783)
chr6 (142-320)||(2606856-2607043)
chr6 (207-320)||(7497507-7497620)
chr6 (207-320)||(30384743-30384856)
chr6 (204-320)||(31975675-31975791)
chr6 (207-320)||(31067841-31067954)
chr6 (207-320)||(14262115-14262228)
chr6 (207-320)||(34758758-34758871)
chr6 (207-320)||(4200130-4200243)
chr6 (207-320)||(31896046-31896159)
chr6 (185-317)||(28900842-28900965)
chr6 (215-319)||(3000202-3000306)
chr6 (204-320)||(1463694-1463810)
chr6 (204-320)||(6788061-6788177)
chr6 (204-322)||(10113803-10113921)
chr6 (179-269)||(33641286-33641376)
chr6 (204-280)||(31535083-31535159)
chr6 (196-280)||(7835379-7835463)
chr6 (216-282)||(13461372-13461438)
chr6 (254-320)||(34773807-34773872)
chr6 (204-280)||(8779604-8779680)
chr6 (204-280)||(31996271-31996347)
chr6 (204-279)||(21199556-21199631)
[»] chr5 (22 HSPs)
chr5 (210-320)||(1460828-1460938)
chr5 (207-320)||(4240145-4240258)
chr5 (207-320)||(4549937-4550050)
chr5 (207-320)||(13926341-13926454)
chr5 (207-320)||(37014264-37014377)
chr5 (166-320)||(34218430-34218584)
chr5 (204-323)||(16548869-16548988)
chr5 (207-320)||(5949522-5949634)
chr5 (207-319)||(40013384-40013496)
chr5 (204-309)||(29716815-29716920)
chr5 (207-320)||(39852780-39852893)
chr5 (204-320)||(5651211-5651327)
chr5 (202-318)||(15672703-15672819)
chr5 (207-320)||(13999773-13999886)
chr5 (204-320)||(7125189-7125305)
chr5 (204-324)||(37798144-37798263)
chr5 (216-319)||(21489862-21489965)
chr5 (199-280)||(25868800-25868881)
chr5 (204-280)||(2675098-2675174)
chr5 (204-320)||(28623191-28623307)
chr5 (204-277)||(21238783-21238856)
chr5 (244-280)||(29758707-29758743)
[»] scaffold1504 (1 HSPs)
scaffold1504 (207-320)||(1276-1389)
[»] scaffold0543 (1 HSPs)
scaffold0543 (207-320)||(10934-11047)
[»] scaffold0013 (1 HSPs)
scaffold0013 (137-320)||(89241-89424)
[»] scaffold0573 (1 HSPs)
scaffold0573 (185-317)||(8829-8952)
[»] scaffold0383 (1 HSPs)
scaffold0383 (207-253)||(16708-16754)
[»] scaffold0152 (2 HSPs)
scaffold0152 (207-253)||(20944-20990)
scaffold0152 (207-253)||(28811-28857)
[»] scaffold0246 (1 HSPs)
scaffold0246 (222-282)||(25642-25702)


Alignment Details
Target: chr7 (Bit Score: 94; Significance: 1e-45; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 175 - 320
Target Start/End: Complemental strand, 32884324 - 32884179
Alignment:
Q  175 tttacacgaatttatcgagttttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgt 274  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||||||||| ||||||||||  |||||||| ||||||| ||||||||||||||    
T  32884324 tttacacgagtttaccgagtgttaactcagtcaaaccttccgattttaccagaaacagagtttacctcagagttaactcgatttttgtacctaaaaacgt 32884225  T
Q  275 aaactcagtaagctcggagagttaacactcgatttgcggaacattg 320  Q
    |||||| |||| ||||||||||||||||||||||| ||||||||||    
T  32884224 aaactcggtaatctcggagagttaacactcgatttacggaacattg 32884179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 8675856 - 8675739
Alignment:
Q  204 gtcaaacctttcgatttt-accagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacac 302  Q
    |||||||||||||||||| ||||||||| ||||||||||  ||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  8675856 gtcaaacctttcgatttttaccagaaaccgagtttaccttagagttaacacgattttggtacctaaaaacgttaactcggtaatctcggagagttaacac 8675757  T
Q  303 tcgatttgcggaacattg 320  Q
    |||||||||| |||||||    
T  8675756 tcgatttgcgaaacattg 8675739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 29893493 - 29893380
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    |||||||||||||| ||||||||||||||||||||  |||||||||||||||| |||| |||||| |||||||| |||| ||||||||||||||||||||    
T  29893493 aaacctttcgatttcaccagaaactgagtttacctcagagttaacacgatttttgtacttaaaaatgtaaactcggtaatctcggagagttaacactcga 29893394  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  29893393 tttgcggaacattg 29893380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 37972561 - 37972674
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| |||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||| |||| ||| || |||||||||||||    
T  37972561 aaaccttccgattttaccagaaactgagtttatctcagagttaacacgattttggtacctaaaaacgtaaactcggtaatctcagaaagttaacactcga 37972660  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  37972661 tttgcggaacattg 37972674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 12740894 - 12740778
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    |||||||||| | ||||||||||| || ||||||||||  ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  12740894 gtcaaaccttccaattttaccagacaccgagtttacctcagagttaacacgattttggtacctaaaaacgtaaactcggtaatctcggagagttaacact 12740795  T
Q  304 cgatttgcggaacattg 320  Q
    ||||||||| |||||||    
T  12740794 cgatttgcgtaacattg 12740778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 216 - 320
Target Start/End: Complemental strand, 41827840 - 41827736
Alignment:
Q  216 gattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaa 315  Q
    ||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||| ||||||||||    
T  41827840 gattttaccagaaactgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcaataatctcagagagttaacactcaatttgcggaa 41827741  T
Q  316 cattg 320  Q
    |||||    
T  41827740 cattg 41827736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 18838931 - 18838818
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||    
T  18838931 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcga 18838832  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  18838831 tttgcggaacattg 18838818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 33891918 - 33892031
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| |||||||||||||||||||  |||| ||||||||||||||||||||    
T  33891918 aaaccttccaattttaccagaaaccgattttaccttagagttaacacgatttttgtacctaaaaacgtaaacttggtaatctcggagagttaacactcga 33892017  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  33892018 tttgcggaacattg 33892031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 37328428 - 37328315
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| |||||||||||||||  ||||||||||  |||||||||||||||| ||||||||||||||||||||  ||| |||||||||| |||||||||    
T  37328428 aaaccttccgattttaccagaaatcgagtttaccttagagttaacacgatttttgtacctaaaaacgtaaactcgataatctcggagagtcaacactcga 37328329  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  37328328 tttgcggaacattg 37328315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 23101812 - 23101699
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | ||||||||||||||||| |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| |||||||| |||||||||||    
T  23101812 aaaccttccaattttaccagaaactgattttaccttagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 23101713  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  23101712 tttgcggaacattg 23101699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 29614479 - 29614592
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||||| |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| |||||||| |||||||||||    
T  29614479 aaacctttcaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 29614578  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  29614579 tttgcggaacattg 29614592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 219 - 320
Target Start/End: Complemental strand, 33383183 - 33383082
Alignment:
Q  219 tttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacat 318  Q
    |||| ||||||| ||||||| ||  |||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  33383183 tttatcagaaaccgagtttatctcagagttaccacgattttggtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgcggaacat 33383084  T
Q  319 tg 320  Q
    ||    
T  33383083 tg 33383082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 44256439 - 44256552
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| |||||||||||||||  ||||||||||  |||||||||||||||| ||| ||||||||||||||||  ||| ||||||||||||||||||||    
T  44256439 aaaccttccgattttaccagaaatcgagtttacctcagagttaacacgatttttgtatctaaaaacgtaaactcgataatctcggagagttaacactcga 44256538  T
Q  307 tttgcggaacattg 320  Q
    ||||||| ||||||    
T  44256539 tttgcgggacattg 44256552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 214 - 320
Target Start/End: Complemental strand, 43172221 - 43172115
Alignment:
Q  214 tcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcgg 313  Q
    ||||||||||||||||  ||||||||||  ||||||||| ||||||| |||||||||| |||||||| |||| ||| |||||||||||||||||||||||    
T  43172221 tcgattttaccagaaatcgagtttacctccgagttaacatgattttgatacctaaaaatgtaaactcggtaaactcagagagttaacactcgatttgcgg 43172122  T
Q  314 aacattg 320  Q
    |||||||    
T  43172121 aacattg 43172115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 510167 - 510054
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| |||||||| |||||||||||    
T  510167 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 510068  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  510067 tttgcggaacattg 510054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 7993678 - 7993565
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| |||||||||||||||| ||||||||||   ||||||||||||||| |||| ||||||  || |||| |||| ||||||||||||||||||||    
T  7993678 aaaccttccgattttaccagaaaccgagtttacctcatagttaacacgatttttgtacttaaaaatatatactcggtaatctcggagagttaacactcga 7993579  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  7993578 tttgcggaacattg 7993565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 28034532 - 28034645
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || ||||| |  |||||||||||||||| |||| ||||||||||||||| |||| ||| ||||||||||||||||    
T  28034532 aaaccttccaattttaccagaaaccgattttacatcagagttaacacgatttttgtacataaaaacgtaaactcggtaatctcagagagttaacactcga 28034631  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  28034632 tttgcggaacattg 28034645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 28342832 - 28342719
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| |||||||| |||||||||||    
T  28342832 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 28342733  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  28342732 tttgcggaacattg 28342719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 29586035 - 29585922
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| |||||||||| ||||| || |||||||  |||||||||||||||| |||||||||||||||||||| |||| ||| |||||||||||||| |    
T  29586035 aaaccttccgattttacccgaaaccgactttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcagagagttaacactcaa 29585936  T
Q  307 tttgcggaacattg 320  Q
    | ||||||||||||    
T  29585935 tctgcggaacattg 29585922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 316
Target Start/End: Original strand, 40460398 - 40460507
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| |||||||||| ||||||||| |||| |||| |||||||||||||||    
T  40460398 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaagcgtaaactcggtaatctcgaagagttaacactcga 40460497  T
Q  307 tttgcggaac 316  Q
    ||||||||||    
T  40460498 tttgcggaac 40460507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 221 - 320
Target Start/End: Complemental strand, 39028594 - 39028495
Alignment:
Q  221 taccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattg 320  Q
    |||||||||| || |||||||  ||||| |||| ||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  39028594 taccagaaaccgattttacctcagagtttacacaatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgcggaacattg 39028495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 210 - 320
Target Start/End: Original strand, 44121620 - 44121730
Alignment:
Q  210 cctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgattt 309  Q
    |||| |||||||||||||||| || |||||||   ||||||||||||||| ||||||||||||||||| || |||| ||| |||||||||||||||||||    
T  44121620 ccttccgattttaccagaaaccgaatttacctcatagttaacacgatttttgtacctaaaaacgtaaattcggtaatctcagagagttaacactcgattt 44121719  T
Q  310 gcggaacattg 320  Q
    |||||| ||||    
T  44121720 gcggaatattg 44121730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 204 - 323
Target Start/End: Complemental strand, 16709510 - 16709393
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    |||||||||| ||| |||||||  ||||||||||||||  |||||| |||||||||||||||||||||||||||||| |||| |||  |  |||||||||    
T  16709510 gtcaaaccttccgagtttacca--aactgagtttacctcagagttaccacgattttggtacctaaaaacgtaaactcggtaaactcataatgttaacact 16709413  T
Q  304 cgatttgcggaacattgctt 323  Q
     |||||||||||||||||||    
T  16709412 tgatttgcggaacattgctt 16709393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 204 - 323
Target Start/End: Complemental strand, 17683746 - 17683629
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    |||||||||| ||| |||||||  ||||||||||||||  |||||| |||||||||||||||||||||||||||||| |||| |||  |  |||||||||    
T  17683746 gtcaaaccttccgagtttacca--aactgagtttacctcagagttaccacgattttggtacctaaaaacgtaaactcggtaaactcataatgttaacact 17683649  T
Q  304 cgatttgcggaacattgctt 323  Q
     |||||||||||||||||||    
T  17683648 tgatttgcggaacattgctt 17683629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 204 - 319
Target Start/End: Complemental strand, 42610694 - 42610579
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||||||  |||||||||||||||  |||||||||   | ||||||||||||||||||||||| ||||||| || |||| ||| |||||||||||||    
T  42610694 gtcaaaccttctgattttaccagaaaccaagtttacctcaaatttaacacgattttggtacctaaacacgtaaattcggtaaactcagagagttaacact 42610595  T
Q  304 cgatttgcggaacatt 319  Q
    | ||||||||||||||    
T  42610594 caatttgcggaacatt 42610579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 39784628 - 39784515
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| |||| ||| |||||||||||    
T  39784628 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcgaagatttaacactcga 39784529  T
Q  307 tttgcggaacattg 320  Q
    ||| ||||||||||    
T  39784528 tttacggaacattg 39784515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 204 - 285
Target Start/End: Original strand, 48136909 - 48136990
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaa 285  Q
    ||||||||||   |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  48136909 gtcaaaccttctaattttaccagaaactgagtttacctcagagttaacacgattttggtacctaaaaacgtaaactcggtaa 48136990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 3023455 - 3023342
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||| ||||||| || |||||||   |||||||| |||||| |||||||||||| |||||||  ||| ||||||||||||||||||||    
T  3023455 aaaccttccaattttatcagaaaccgattttacctcaaagttaacatgatttttgtacctaaaaacataaactcgataatctcggagagttaacactcga 3023356  T
Q  307 tttgcggaacattg 320  Q
    |||||||| |||||    
T  3023355 tttgcggatcattg 3023342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 26201813 - 26201929
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| || |||||||| ||  || |||||||||||  ||||| |||||||||||||||||||||| ||||| || |||| |||||  ||||||||||    
T  26201813 gtcaaacattccgattttagcaataattgagtttacctccgagtttacacgattttggtacctaaaaatgtaaattcggtaaactcggcaagttaacact 26201912  T
Q  304 cgatttgcggaacattg 320  Q
    ||||||| |||||||||    
T  26201913 cgatttgtggaacattg 26201929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 215 - 322
Target Start/End: Original strand, 4639908 - 4640015
Alignment:
Q  215 cgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcgga 314  Q
    |||||||||||||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| |||| ||||||| |||    
T  4639908 cgattttaccagaaatagagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtgga 4640007  T
Q  315 acattgct 322  Q
    ||||||||    
T  4640008 acattgct 4640015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 322
Target Start/End: Complemental strand, 27148910 - 27148804
Alignment:
Q  216 gattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaa 315  Q
    ||||||| | |||| |||| ||||||  || |||||||||||||| |||||||||||||||||||  ||| ||  | |||||||||||||||||| ||||    
T  27148910 gattttagctgaaattgaggttacctccgatttaacacgattttgatacctaaaaacgtaaactcgataaactttgcgagttaacactcgatttgtggaa 27148811  T
Q  316 cattgct 322  Q
    |||||||    
T  27148810 cattgct 27148804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 11735215 - 11735292
Alignment:
Q  206 caaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagt 283  Q
    ||||| || |||||||||||||||  ||||||||||  |||||||||||||||||| |||||||| ||||||||||||    
T  11735215 caaacattccgattttaccagaaatcgagtttacctccgagttaacacgattttgggacctaaaatcgtaaactcagt 11735292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 171 - 280
Target Start/End: Original strand, 37915886 - 37915995
Alignment:
Q  171 caattttacacgaatttatcgagttttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaa 270  Q
    |||||| |||||| ||||  |||| |||||||||||||||  ||||||||||||| |||  |||||||||| |||||||| ||| |||| | |||||||     
T  37915886 caatttcacacgagtttactgagtgttaactcggtcaaactgttcgattttaccataaatcgagtttacctctgagttaaaacgcttttagcacctaaac 37915985  T
Q  271 acgtaaactc 280  Q
    ||||||||||    
T  37915986 acgtaaactc 37915995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 14741503 - 14741387
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| || ||||||||| |||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| ||||     
T  14741503 gtcaaactttccgattttactagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacg 14741404  T
Q  304 cgatttgcggaacattg 320  Q
    ||||||| |||||||||    
T  14741403 cgatttgtggaacattg 14741387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 210
Target Start/End: Complemental strand, 21486287 - 21486222
Alignment:
Q  145 ttagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttttaactcggtcaaac 210  Q
    ||||||||||||||||||| ||||||| | ||||||||| |||| ||||| |||||||| ||||||    
T  21486287 ttagatgtaaactcgtaaatttcggtcgagtttacacgagtttaccgagtgttaactcgatcaaac 21486222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 280
Target Start/End: Complemental strand, 21024143 - 21024067
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||| || |||||| |||| |||| ||||||||||  ||||||||||| |||||  |||||||| |||||||||    
T  21024143 gtcaaactttccgatttcaccaaaaaccgagtttaccttcgagttaacacgtttttgtcacctaaaatcgtaaactc 21024067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 279
Target Start/End: Original strand, 14732318 - 14732393
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaact 279  Q
    ||||||| || |||||| |||| ||||  |||||||||  ||||||||||| |||||  |||||||||||||||||    
T  14732318 gtcaaactttccgatttcaccaaaaaccaagtttacctccgagttaacacgtttttgccacctaaaaacgtaaact 14732393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 30823158 - 30823108
Alignment:
Q  208 aacctttcgattttaccagaaactgagtttacctatgagttaacacgattt 258  Q
    |||||| ||||||||| |||||| ||||||||||  |||||||||||||||    
T  30823158 aaccttccgattttactagaaaccgagtttacctcagagttaacacgattt 30823108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 319
Target Start/End: Original strand, 5772106 - 5772171
Alignment:
Q  252 acgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacatt 319  Q
    ||||||||||||| |||||| ||||||||||||| ||||  ||||  ||||||||||| || ||||||    
T  5772106 acgattttggtacataaaaatgtaaactcagtaaactcgacgagt--acactcgatttacgaaacatt 5772171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 33497116 - 33497192
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||| || | |||||| ||||||  ||||||||||  ||||| ||||||||||| ||| |||||| ||||||||    
T  33497116 gtcaaacattccaattttatcagaaatcgagtttacctccgagttgacacgattttgatacttaaaaatgtaaactc 33497192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 292 - 320
Target Start/End: Complemental strand, 47067195 - 47067167
Alignment:
Q  292 agagttaacactcgatttgcggaacattg 320  Q
    |||||||||||||||||||||||||||||    
T  47067195 agagttaacactcgatttgcggaacattg 47067167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 4e-42; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 204 - 319
Target Start/End: Original strand, 12522531 - 12522646
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    |||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||    
T  12522531 gtcaaaccttccgattttaccagaaaccgagtttacctctgagttaacacgattttggtacctaaaaatgcaaacttagtaaactcggagagttaacact 12522630  T
Q  304 cgatttgcggaacatt 319  Q
    ||||||||||||||||    
T  12522631 cgatttgcggaacatt 12522646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 10295017 - 10295130
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| |||||||||||||||| ||||||||||  |||||||||||||| | |||||||||||||||||||| |||| ||||||||||||||||||||    
T  10295017 aaaccttccgattttaccagaaaccgagtttacctcagagttaacacgattgttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcga 10295116  T
Q  307 tttgcggaacattg 320  Q
    ||| ||||||||||    
T  10295117 tttacggaacattg 10295130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 31625831 - 31625718
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| |||||||||||||||| ||||||||||  |||||||||| ||||| ||||||||||| |||||||| |||| ||||||||||||||||||||    
T  31625831 aaaccttccgattttaccagaaaccgagtttacctcagagttaacacaatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcga 31625732  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  31625731 tttgcggaacattg 31625718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 9288172 - 9288285
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| |||||||||||||||||||| |||| |||| |||||||||||||||    
T  9288172 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcgaagagttaacactcga 9288271  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  9288272 tttgcggaacattg 9288285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 19717552 - 19717665
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||    
T  19717552 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcga 19717651  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  19717652 tttgcggaacattg 19717665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 43166351 - 43166467
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    |||||||||||| ||||||||||||||| | |||||||  |||||||||||||||| |||||||||||||||||||| |||| |||| | | ||||||||    
T  43166351 gtcaaacctttcaattttaccagaaacttattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcgaaaaattaacact 43166450  T
Q  304 cgatttgcggaacattg 320  Q
    |||||||||||||||||    
T  43166451 cgatttgcggaacattg 43166467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 204 - 322
Target Start/End: Original strand, 8029864 - 8029982
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    |||||||||| |||||||||||||||  ||||||| ||  |||||||||||||||||||||||||| ||||||||||  ||| |||| ||||||||||||    
T  8029864 gtcaaaccttccgattttaccagaaatcgagtttatctcagagttaacacgattttggtacctaaacacgtaaactcgataaactcgaagagttaacact 8029963  T
Q  304 cgatttgcggaacattgct 322  Q
    |||||| ||||||||||||    
T  8029964 cgatttacggaacattgct 8029982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 18305654 - 18305767
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| |||||||||||||||| ||| |||| ||||||||||||||||||||    
T  18305654 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaagctcggtaatctcggagagttaacactcga 18305753  T
Q  307 tttgcggaacattg 320  Q
    |||||| |||||||    
T  18305754 tttgcgtaacattg 18305767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 18958405 - 18958518
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | ||||||||||||||  | |||||||  |||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||    
T  18958405 aaaccttccaattttaccagaaaccaattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcga 18958504  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  18958505 tttgcggaacattg 18958518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 207 - 312
Target Start/End: Complemental strand, 32498064 - 32497959
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| ||||||||| |||||| ||||||||||  |||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||| |    
T  32498064 aaaccttccgattttactagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcaa 32497965  T
Q  307 tttgcg 312  Q
    ||||||    
T  32497964 tttgcg 32497959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 142 - 321
Target Start/End: Original strand, 6388074 - 6388266
Alignment:
Q  142 tttttagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttt----taactcggtcaaac--------ctttc-gattttaccagaa 228  Q
    ||||||||| ||||||||||||| |||||||| ||||||||| |||||||||| |    ||||| ||||||||        ||||| |||||||||| ||    
T  6388074 tttttagatttaaactcgtaaaactcggtcaagtttacacgagtttatcgagtgtacgttaacttggtcaaacttgtcaaactttccgattttaccataa 6388173  T
Q  229 actgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattgc 321  Q
    || ||||||||||  ||||||||||||||||||||||||||||| |||| ||  ||| ||||| |||||| ||||| ||||||||||||||||    
T  6388174 acagagtttacctccgagttaacacgattttggtacctaaaaacataaattcgataaactcggcgagttaccactcaatttgcggaacattgc 6388266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 26856628 - 26856515
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    |||||||  ||||||||||||||| ||||||||||  |||||||||||||||| ||||||| |||| ||||||| |||| ||||||||||||||||||||    
T  26856628 aaaccttctgattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctataaacataaactcggtaatctcggagagttaacactcga 26856529  T
Q  307 tttgcggaacattg 320  Q
    |||| | |||||||    
T  26856528 tttgtgtaacattg 26856515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 42305282 - 42305395
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  ||||||||||||||||  |||||||||| |||||||| |||| ||||||||||||||||||||    
T  42305282 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttatacctaaaaaggtaaactcggtaatctcggagagttaacactcga 42305381  T
Q  307 tttgcggaacattg 320  Q
    |||| |||||||||    
T  42305382 tttgtggaacattg 42305395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 16364229 - 16364116
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| ||||||||| |||||| || |||||||  |||||||||||||||| ||||||||||||||||| ||  ||| |||  |||||||||||||||    
T  16364229 aaaccttccgattttactagaaaccgaatttaccttagagttaacacgatttttgtacctaaaaacgtaaattcgataatctcatagagttaacactcga 16364130  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  16364129 tttgcggaacattg 16364116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 175 - 320
Target Start/End: Complemental strand, 24082318 - 24082173
Alignment:
Q  175 tttacacgaatttatcgagttttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgt 274  Q
    |||| |||| |||| ||||| |||||| |||||||||||||||||||||||||||| || |||||||  |  ||||||| |||||||||||||||| | |    
T  24082318 tttatacgagtttaccgagtgttaacttggtcaaacctttcgattttaccagaaaccgaatttacctcagtattaacacaattttggtacctaaaatcat 24082219  T
Q  275 aaactcagtaagctcggagagttaacactcgatttgcggaacattg 320  Q
    ||||| ||||| ||||  |||||||||||| |||||  ||||||||    
T  24082218 aaacttagtaaactcgtcgagttaacactcaatttgtagaacattg 24082173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 39467196 - 39467309
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||   | |||||||  ||||||| |||||||| |||||||||||||||||| | |||| ||||||||||||||||||||    
T  39467196 aaaccttccaattttaccagaaatcaattttaccttagagttaatacgatttttgtacctaaaaacgtaaacgcggtaatctcggagagttaacactcga 39467295  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  39467296 tttgcggaacattg 39467309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 207 - 317
Target Start/End: Original strand, 43308186 - 43308296
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || ||||  |  |||||||||||||||||||||||||||||| ||||||  ||| |||| |||||||||||||||    
T  43308186 aaaccttccaattttaccagaaaccgattttatatcagagttaacacgattttggtacctaaaaacgcaaactcgataatctcgaagagttaacactcga 43308285  T
Q  307 tttgcggaaca 317  Q
    |||||||||||    
T  43308286 tttgcggaaca 43308296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 14781810 - 14781923
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  ||||||||||||||||  |||||||||| || |||||  ||| |||||||| |||||||||||    
T  14781810 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttatacctaaaaatgtcaactcgataatctcggagatttaacactcga 14781909  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  14781910 tttgcggaacattg 14781923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 44725469 - 44725582
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| |||| |||  ||| ||| |||| |||||||||||    
T  44725469 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaatctcgataatctctgagatttaacactcga 44725568  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  44725569 tttgcggaacattg 44725582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 204 - 279
Target Start/End: Complemental strand, 41394033 - 41393958
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaact 279  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||| ||||||||||||||||||    
T  41394033 gtcaaacctttcgattttatcagaaactgagtttacctccgaattaacacgattttgatacctaaaaacgtaaact 41393958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 215 - 280
Target Start/End: Complemental strand, 24067172 - 24067107
Alignment:
Q  215 cgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||||||||||| |||||| ||||  ||||| |||||||||||||||||||||||||||||||    
T  24067172 cgattttaccagaaattgagttcacctccgagttgacacgattttggtacctaaaaacgtaaactc 24067107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 19484292 - 19484176
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| || |||||||||||||||  ||||||||||  ||||||||||| |||| | ||||||| || ||||||| |||| ||||  ||||| ||||     
T  19484292 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacataaactcggtaaactcgccgagttgacacg 19484193  T
Q  304 cgatttgcggaacattg 320  Q
    ||||||| |||||||||    
T  19484192 cgatttgtggaacattg 19484176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 204 - 319
Target Start/End: Complemental strand, 17234791 - 17234676
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| || |||||||||||||||  ||||||||||  ||||| | | |||||||||||||||||||| |||||  |||| ||| | ||||||||| |    
T  17234791 gtcaaacattccgattttaccagaaatcgagtttacctccgagttgataggattttggtacctaaaaacgcaaacttggtaaactcagcgagttaacatt 17234692  T
Q  304 cgatttgcggaacatt 319  Q
    |||||||  |||||||    
T  17234691 cgatttgttgaacatt 17234676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 146 - 275
Target Start/End: Original strand, 27878591 - 27878729
Alignment:
Q  146 tagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttttaactcg---------gtcaaacctttcgattttaccagaaactgagtt 236  Q
    |||||||||||| |||||| |||||| | ||||||||| || ||||||| |||||||          |||||||||  |||||||||||||||| || ||    
T  27878591 tagatgtaaacttgtaaaactcggtcgagtttacacgagttcatcgagtgttaactctatcaaactcgtcaaacctaccgattttaccagaaaccgaatt 27878690  T
Q  237 tacctatgagttaacacgattttggtacctaaaaacgta 275  Q
    ||| |  |||||||||||||||||||||||||| |||||    
T  27878691 tacatccgagttaacacgattttggtacctaaacacgta 27878729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 146 - 275
Target Start/End: Original strand, 28018772 - 28018910
Alignment:
Q  146 tagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttttaactcg---------gtcaaacctttcgattttaccagaaactgagtt 236  Q
    |||||||||||| |||||| |||||| | ||||||||| || ||||||| |||||||          |||||||||  |||||||||||||||| || ||    
T  28018772 tagatgtaaacttgtaaaactcggtcgagtttacacgagttcatcgagtgttaactctatcaaactcgtcaaacctaccgattttaccagaaaccgaatt 28018871  T
Q  237 tacctatgagttaacacgattttggtacctaaaaacgta 275  Q
    ||| |  |||||||||||||||||||||||||| |||||    
T  28018872 tacatccgagttaacacgattttggtacctaaacacgta 28018910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 7760854 - 7760770
Alignment:
Q  235 tttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacatt 319  Q
    |||||||  ||||| ||||||||||| ||||||||||  |||||||||||| ||||   ||||||||||||||||| ||||||||    
T  7760854 tttaccttcgagttgacacgattttgatacctaaaaatataaactcagtaaactcgataagttaacactcgatttgtggaacatt 7760770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 292
Target Start/End: Complemental strand, 7466834 - 7466759
Alignment:
Q  217 attttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcgga 292  Q
    |||||| |||||||||| |||||||  |||||||||||||||| |||| ||||||| ||||||| |||| ||||||    
T  7466834 attttatcagaaactgattttacctcagagttaacacgatttttgtacttaaaaacataaactcggtaatctcgga 7466759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 244 - 290
Target Start/End: Original strand, 12522485 - 12522531
Alignment:
Q  244 gagttaacacgattttggtacctaaaaacgtaaactcagtaagctcg 290  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||    
T  12522485 gagttaacacgattttggtacctaaaaacgtaaacttggtaagctcg 12522531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 277
Target Start/End: Original strand, 27915535 - 27915675
Alignment:
Q  146 tagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttttaactcggtcaaac---------ctttcgattttaccagaaactgagtt 236  Q
    |||||||||||| |||||| |||||| | ||||||||| || ||||||| |||||||||||||||         ||  |||||||| ||||||  || ||    
T  27915535 tagatgtaaacttgtaaaactcggtcgagtttacacgagttcatcgagtgttaactcggtcaaactcgtcaaacctaccgattttatcagaaatcgaatt 27915634  T
Q  237 tacctatgagttaacacgattttggtacctaaaaacgtaaa 277  Q
    ||  | |||||||||||||||||||||| |||| |||||||    
T  27915635 taaatctgagttaacacgattttggtacataaacacgtaaa 27915675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 277
Target Start/End: Original strand, 27961954 - 27962094
Alignment:
Q  146 tagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttttaactcggtcaaac---------ctttcgattttaccagaaactgagtt 236  Q
    |||||||||||| |||||| |||||| | ||||||||| || ||||||| |||||||||||||||         ||  |||||||| ||||||  || ||    
T  27961954 tagatgtaaacttgtaaaactcggtcgagtttacacgagttcatcgagtgttaactcggtcaaactcgtcaaacctaccgattttatcagaaatcgaatt 27962053  T
Q  237 tacctatgagttaacacgattttggtacctaaaaacgtaaa 277  Q
    ||  | |||||||||||||||||||||| |||| |||||||    
T  27962054 taaatctgagttaacacgattttggtacataaacacgtaaa 27962094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 280
Target Start/End: Original strand, 37131322 - 37131386
Alignment:
Q  216 gattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    |||||||||||||   ||||||||||  ||||| |||||||||||||||||||||| ||||||||    
T  37131322 gattttaccagaagtcgagtttacctccgagttgacacgattttggtacctaaaaatgtaaactc 37131386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 26620369 - 26620445
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||| ||||||||||| |||||||||| ||||||    |||||||||||||| | || |||||||  |||||||    
T  26620369 gtcaaacttttcgattttatcagaaactgaatttaccaccaagttaacacgatttcgatatctaaaaatataaactc 26620445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 1e-39; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 205 - 320
Target Start/End: Original strand, 5494772 - 5494887
Alignment:
Q  205 tcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactc 304  Q
    |||||||||  ||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  5494772 tcaaaccttctgattttaccagaaaccgagtttacctcagagttaacacgattttggtacctaaaaacgtaaactcggtaatctcggagagttaacactc 5494871  T
Q  305 gatttgcggaacattg 320  Q
     |||||||||||||||    
T  5494872 aatttgcggaacattg 5494887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 45273092 - 45272976
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    |||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||| ||||||||||||||||||||  ||| |||||||||||||||||    
T  45273092 gtcaaaccttccgattttaccagaaaccgagtttacctcagagttaacacaatttttgtacctaaaaacgtaaactcgataatctcggagagttaacact 45272993  T
Q  304 cgatttgcggaacattg 320  Q
    |||||||||||||||||    
T  45272992 cgatttgcggaacattg 45272976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 46328508 - 46328395
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| |||||||| ||||||| ||||||||||  |||||||||||||||| |||||||||||||||||||| |||| |||||||| |||||||||||    
T  46328508 aaaccttccgattttaacagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagaattaacactcga 46328409  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  46328408 tttgcggaacattg 46328395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 176 - 320
Target Start/End: Original strand, 9322153 - 9322297
Alignment:
Q  176 ttacacgaatttatcgagttttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgta 275  Q
    |||||||| |||| ||||| ||||||| |||||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| |||    
T  9322153 ttacacgagtttaccgagtgttaactcagtcaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgta 9322252  T
Q  276 aactcagtaagctcggagagttaacactcgatttgcggaacattg 320  Q
    |||||  ||| |||||||| |||||||||||||| ||||||||||    
T  9322253 aactcgataatctcggagatttaacactcgatttacggaacattg 9322297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 146 - 321
Target Start/End: Original strand, 47371531 - 47371715
Alignment:
Q  146 tagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttttaactcggtcaaac---------ctttcgattttaccagaaactgagtt 236  Q
    ||||||||||||||||||| |||||| | ||||||||| |||| ||||| |||||||||||||||         ||| |||||||||||||||  |||||    
T  47371531 tagatgtaaactcgtaaaactcggtcgagtttacacgagtttaccgagtgttaactcggtcaaactcggcaaaccttccgattttaccagaaatcgagtt 47371630  T
Q  237 tacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattgc 321  Q
    |||||  |||||||||||||||||||||||||  ||||||||||  ||| ||| ||| |||||||||||||||||| ||||||||    
T  47371631 tacctccgagttaacacgattttggtacctaagtacgtaaactcgataaactcagagtgttaacactcgatttgcgaaacattgc 47371715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 204 - 319
Target Start/End: Original strand, 3583579 - 3583694
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| || ||||||||| |||||| |||||||| | | |||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  3583579 gtcaaactttccgattttactagaaaccgagtttacttctaagttaacacgatttcggtacctaaaaacgtaaactcggtaaactcggagagttaacact 3583678  T
Q  304 cgatttgcggaacatt 319  Q
    ||||||||||||||||    
T  3583679 cgatttgcggaacatt 3583694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 217 - 320
Target Start/End: Original strand, 8140919 - 8141022
Alignment:
Q  217 attttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaac 316  Q
    |||||||||||||  || |||||||  |||||||||||||||| ||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||    
T  8140919 attttaccagaaatcgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgataatctcggagagttaacactcgatttgcggaac 8141018  T
Q  317 attg 320  Q
    ||||    
T  8141019 attg 8141022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 204 - 319
Target Start/End: Original strand, 28403969 - 28404084
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| |||||||||||  |||||| || |||||||   ||||||||||||||||||||||||||| |||||||||||||  ||| ||||||||||||    
T  28403969 gtcaaacatttcgattttattagaaaccgaatttaccttcaagttaacacgattttggtacctaaaaatgtaaactcagtaaattcgaagagttaacact 28404068  T
Q  304 cgatttgcggaacatt 319  Q
    ||||||||||||||||    
T  28404069 cgatttgcggaacatt 28404084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 6313098 - 6312985
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| |||||||| |||||||||||    
T  6313098 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 6312999  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  6312998 tttgcggaacattg 6312985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 15834710 - 15834823
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | ||||||||| |||  || |||||||  |||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||    
T  15834710 aaaccttccaattttaccaaaaatcgaatttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcga 15834809  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  15834810 tttgcggaacattg 15834823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 25612614 - 25612501
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| |||||||| |||||||||||    
T  25612614 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 25612515  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  25612514 tttgcggaacattg 25612501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 29396110 - 29396223
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| |||||||| |||||||||||    
T  29396110 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 29396209  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  29396210 tttgcggaacattg 29396223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 48966514 - 48966630
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    |||||||||| | |||| | ||||||   |||||||||  |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||| ||    
T  48966514 gtcaaaccttccaatttcatcagaaatcaagtttacctcagagttaacacgattttggtacctaaacacgtaaactcagtaaactcgaagagttaaccct 48966613  T
Q  304 cgatttgcggaacattg 320  Q
    |||||||||||||||||    
T  48966614 cgatttgcggaacattg 48966630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 215 - 320
Target Start/End: Original strand, 38535830 - 38535935
Alignment:
Q  215 cgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcgga 314  Q
    ||||||||||||||||  |||||||||  |||||||||| ||||| ||| |||||||||||||||| |||| || |||||||||| ||||||||||||||    
T  38535830 cgattttaccagaaacccagtttacctcagagttaacacaatttttgtaactaaaaacgtaaactcggtaatcttggagagttaaaactcgatttgcgga 38535929  T
Q  315 acattg 320  Q
    ||||||    
T  38535930 acattg 38535935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 215 - 320
Target Start/End: Original strand, 38558048 - 38558153
Alignment:
Q  215 cgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcgga 314  Q
    ||||||||||||||||  |||||||||  |||||||||| ||||| ||| |||||||||||||||| |||| || |||||||||| ||||||||||||||    
T  38558048 cgattttaccagaaacccagtttacctcagagttaacacaatttttgtaactaaaaacgtaaactcggtaatcttggagagttaaaactcgatttgcgga 38558147  T
Q  315 acattg 320  Q
    ||||||    
T  38558148 acattg 38558153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 51702117 - 51702004
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||||  |||||||||||||| || |||||||  |||||||||| ||||| ||||||||||| ||||||||  ||| |||||||| |||||||||||    
T  51702117 aaaccttttaattttaccagaaaccgattttacctcagagttaacacaatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 51702018  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  51702017 tttgcggaacattg 51702004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 244 - 320
Target Start/End: Original strand, 25830962 - 25831038
Alignment:
Q  244 gagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattg 320  Q
    |||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||    
T  25830962 gagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgtggaacattg 25831038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 212 - 319
Target Start/End: Original strand, 49971627 - 49971734
Alignment:
Q  212 tttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgc 311  Q
    ||||||||||||||||||  ||||||||||  ||||| ||||||||||||||||||||||||||||||| |||| ||| |  |||||||| ||||||||     
T  49971627 tttcgattttaccagaaaacgagtttacctccgagttgacacgattttggtacctaaaaacgtaaactcggtaaactcagtaagttaacattcgatttgt 49971726  T
Q  312 ggaacatt 319  Q
    ||||||||    
T  49971727 ggaacatt 49971734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 48177118 - 48177232
Alignment:
Q  207 aaacctttcgattttaccagaaa-ctgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcg 305  Q
    ||||||| | ||||||||||||| | || |||||||  ||||||||||||||||  |||||||||||||||||||||||| ||| ||||||||| |||||    
T  48177118 aaaccttccaattttaccagaaaaccgattttacctcagagttaacacgatttttctacctaaaaacgtaaactcagtaatctcagagagttaatactcg 48177217  T
Q  306 atttgcggaacattg 320  Q
    ||||||| |||||||    
T  48177218 atttgcgaaacattg 48177232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 49453083 - 49453200
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgatttt-ggtacctaaaaacgtaaactcagtaagctcggagagttaacac 302  Q
    ||||||||||  |||||| |||||||  ||||||||||  |||||||||||||||| |||||||||| || ||||||  |||| |||||| |||||||||    
T  49453083 gtcaaaccttatgatttttccagaaatcgagtttacctcagagttaacacgatttttggtacctaaacacataaactaggtaaactcggacagttaacac 49453182  T
Q  303 tcgatttgcggaacattg 320  Q
    ||||||||||||||||||    
T  49453183 tcgatttgcggaacattg 49453200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 204 - 323
Target Start/End: Original strand, 49236989 - 49237108
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||||||||||||||||||||||| ||| ||| ||  || |||||||| |||||||||||||| || |||||||  ||| |||| ||  ||||||||    
T  49236989 gtcaaacctttcgattttaccagaaaccgagcttaactccgaattaacacggttttggtacctaaacacataaactcgataaactcgaagtattaacact 49237088  T
Q  304 cgatttgcggaacattgctt 323  Q
    |||||| |||||||||||||    
T  49237089 cgatttacggaacattgctt 49237108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 215 - 321
Target Start/End: Original strand, 32760133 - 32760230
Alignment:
Q  215 cgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcgga 314  Q
    ||||||||| |||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||         ||| ||||||||||||||||||||    
T  32760133 cgattttactagaaaccgagtttacctcagagttaacacgattttggtacctaaaaacgtaaactca---------gagtgttaacactcgatttgcgga 32760223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 204 - 323
Target Start/End: Complemental strand, 52182424 - 52182305
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| ||||||||||||||||||  || |||||||  || || |||||||||  ||||||||||||||||||||  ||| ||||| |||||||||||    
T  52182424 gtcaaacatttcgattttaccagaaatcgaatttacctccgaattgacacgatttcagtacctaaaaacgtaaactcgataaactcggcgagttaacact 52182325  T
Q  304 cgatttgcggaacattgctt 323  Q
    ||||||| | |||| |||||    
T  52182324 cgatttgtgaaacagtgctt 52182305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 18798974 - 18798866
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| |||||||| |||     ||||||||||| |||||    
T  18798974 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggta-----ggagagttaacgctcga 18798880  T
Q  307 tttgcggaacattg 320  Q
    | ||||||||||||    
T  18798879 tctgcggaacattg 18798866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 204 - 309
Target Start/End: Complemental strand, 25253591 - 25253486
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    |||||| ||| ||| |||||||||||| || |||||||  |  |||||||||||||||||||||||||| ||||||| |||| ||| |||| ||||||||    
T  25253591 gtcaaatcttccgagtttaccagaaaccgaatttacctcagtattaacacgattttggtacctaaaaacataaactcggtaaactcagagaattaacact 25253492  T
Q  304 cgattt 309  Q
    ||||||    
T  25253491 cgattt 25253486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 35177233 - 35177350
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagtt-aacac 302  Q
    ||||| |||| |||||||| ||||||  |||||||||| ||| |||||||||||||||||||||||||| |||| |   ||| ||||||| ||| |||||    
T  35177233 gtcaatccttccgattttatcagaaatcgagtttacctctgaattaacacgattttggtacctaaaaacataaatttgataaactcggagtgttaaacac 35177332  T
Q  303 tcgatttgcggaacattg 320  Q
    |||||||||||| |||||    
T  35177333 tcgatttgcggaccattg 35177350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 4005165 - 4005049
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| || |||||||||||||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| ||||     
T  4005165 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacg 4005066  T
Q  304 cgatttgcggaacattg 320  Q
    ||||||| |||||||||    
T  4005065 cgatttgtggaacattg 4005049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 216 - 320
Target Start/End: Original strand, 5209403 - 5209507
Alignment:
Q  216 gattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaa 315  Q
    ||||| ||||||||  ||||| ||||  |||||||||||||||||||||||||| |||||||  |  ||| ||| ||| |||||||||||||||||||||    
T  5209403 gatttcaccagaaatcgagttgacctccgagttaacacgattttggtacctaaacacgtaaaaacgataaactcagagtgttaacactcgatttgcggaa 5209502  T
Q  316 cattg 320  Q
    |||||    
T  5209503 cattg 5209507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 26757713 - 26757597
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| || |||||||||||||||  |||||||||| ||||||||| || |||| | ||||||| |||||||||| |||| ||||  ||||| ||||     
T  26757713 gtcaaactttccgattttaccagaaatcgagtttacctctgagttaactcgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacg 26757614  T
Q  304 cgatttgcggaacattg 320  Q
    ||||||| |||||||||    
T  26757613 cgatttgtggaacattg 26757597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 204 - 309
Target Start/End: Original strand, 27257881 - 27257986
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| || ||||||||||  |||   |||||||||  ||||| |||||||||||||||||||||||||||| ||| ||| ||||| |||||||||||    
T  27257881 gtcaaacattccgattttaccgaaaatcaagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgagttaacact 27257980  T
Q  304 cgattt 309  Q
     |||||    
T  27257981 agattt 27257986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 207 - 280
Target Start/End: Complemental strand, 49231529 - 49231456
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||| ||||| |||||||||| ||||||||||  |||||||||||||||| |||||||||||| |||||||    
T  49231529 aaaccttccgattataccagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacataaactc 49231456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 1243329 - 1243445
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| || |||||||||||||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||  |||| ||||  ||||| ||||     
T  1243329 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactaggtaaactcgccgagttgacacg 1243428  T
Q  304 cgatttgcggaacattg 320  Q
    ||||||| |||||||||    
T  1243429 cgatttgtggaacattg 1243445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 8147415 - 8147299
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| || | |||||||||||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| ||||     
T  8147415 gtcaaactttgcaattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgctgagttgacacg 8147316  T
Q  304 cgatttgcggaacattg 320  Q
    ||||||| |||||||||    
T  8147315 cgatttgtggaacattg 8147299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 320
Target Start/End: Complemental strand, 9192110 - 9192006
Alignment:
Q  216 gattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaa 315  Q
    ||||||||||||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| |||| ||||||| ||||    
T  9192110 gattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtggaa 9192011  T
Q  316 cattg 320  Q
    |||||    
T  9192010 cattg 9192006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 41353519 - 41353403
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| || |||||||||||||||  ||||||||||  ||||||||||| |||| | ||||||| || ||||||| |||| ||||  ||||| ||||     
T  41353519 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacataaactcggtaaactcgccgagttgacacg 41353420  T
Q  304 cgatttgcggaacattg 320  Q
    ||||||| |||||||||    
T  41353419 cgatttgtggaacattg 41353403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 51106990 - 51106874
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| || |||||||||||||||  |||||| |||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| ||||     
T  51106990 gtcaaactttccgattttaccagaaatcgagttttcctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacg 51106891  T
Q  304 cgatttgcggaacattg 320  Q
    ||||||| |||||||||    
T  51106890 cgatttgtggaacattg 51106874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 255 - 320
Target Start/End: Original strand, 28387141 - 28387206
Alignment:
Q  255 attttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattg 320  Q
    ||||| |||| |||||| |||||||| |||| |||||||||||||||| |||||||||||||||||    
T  28387141 atttttgtacataaaaatgtaaactcggtaatctcggagagttaacacacgatttgcggaacattg 28387206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 3593344 - 3593237
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    |||||||||| ||||||||  |||||  || |||||||  ||||||||||||||||| ||||||||||  |||||||         ||||||||||||||    
T  3593344 gtcaaaccttccgattttattagaaatcgaatttacctccgagttaacacgattttgatacctaaaaatataaactc---------ggagagttaacact 3593254  T
Q  304 cgatttgcggaacattg 320  Q
    |||||||||||||||||    
T  3593253 cgatttgcggaacattg 3593237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 196 - 280
Target Start/End: Complemental strand, 18954571 - 18954487
Alignment:
Q  196 ttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||||||||||| || |||||| |||| |||| |||||||| |  ||||||||||| |||||  ||||||||||||||||||    
T  18954571 ttaactcggtcaaactttccgatttcaccaaaaaccgagtttacgtccgagttaacacgtttttgccacctaaaaacgtaaactc 18954487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 280
Target Start/End: Complemental strand, 7798598 - 7798522
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||| || |||||| |||| |||| ||||||||||  ||||||||||| |||||  ||||||||||||||||||    
T  7798598 gtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactc 7798522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 1108450 - 1108372
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcag 282  Q
    ||||||| || |||||| |||| |||| ||||||||||  ||||| ||||| ||||   ||||||||||||||||||||    
T  1108450 gtcaaactttccgatttcaccaaaaaccgagtttacctccgagtttacacgtttttaccacctaaaaacgtaaactcag 1108372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 204 - 274
Target Start/End: Original strand, 33886883 - 33886953
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgt 274  Q
    ||||||| || |||||| |||| |||| ||||||||||  ||||||||||| |||||  ||||||||||||    
T  33886883 gtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgt 33886953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 204 - 274
Target Start/End: Complemental strand, 33957367 - 33957297
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgt 274  Q
    ||||||| || |||||| |||| |||| ||||||||||  ||||||||||| |||||  ||||||||||||    
T  33957367 gtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgt 33957297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 280
Target Start/End: Original strand, 2293411 - 2293475
Alignment:
Q  216 gattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||| || ||| ||||| |||||  ||||| |||||||||||| |||||| |||||||||||    
T  2293411 gattttatcaaaaaatgagtctaccttcgagtttacacgattttggcacctaacaacgtaaactc 2293475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 196 - 280
Target Start/End: Complemental strand, 8122294 - 8122211
Alignment:
Q  196 ttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||||||||| | |||| ||||||||| |||  |||||||  |  ||||| ||||||||||||||  |||||||||||||||    
T  8122294 ttaactcggtcaa-cttttcaattttaccaaaaaacgagtttaagttcgagtttacacgattttggtatttaaaaacgtaaactc 8122211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 11579123 - 11579199
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||| || |||||||||||||||   | |||||||  ||||||||||| |||| | ||||||| ||||||||||    
T  11579123 gtcaaactttccgattttaccagaaatcaaatttacctccgagttaacacgtttttagcacctaaacacgtaaactc 11579199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 42304526 - 42304586
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtaccta 267  Q
    ||||||| | |||||||||||||| ||||||||||  || |||||| |||||||| |||||    
T  42304526 aaaccttccaattttaccagaaaccgagtttacctccgaattaacatgattttggcaccta 42304586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 2e-38; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 49501211 - 49501324
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| |||||||||||||||| ||||||||||  |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  49501211 aaaccttccgattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcga 49501310  T
Q  307 tttgcggaacattg 320  Q
    ||||| ||||||||    
T  49501311 tttgcagaacattg 49501324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 49507276 - 49507389
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| |||||||||||||||| ||||||||||  |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  49507276 aaaccttccgattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcga 49507375  T
Q  307 tttgcggaacattg 320  Q
    ||||| ||||||||    
T  49507376 tttgcagaacattg 49507389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 204 - 326
Target Start/End: Complemental strand, 32889973 - 32889851
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||||||  |||||||||||||| ||||||||| |   ||||||||||||||||||||||||| |||||||||| ||||  ||||||||||||||||    
T  32889973 gtcaaaccttctgattttaccagaaattgagtttacatcaaagttaacacgattttggtacctaaacacgtaaactcggtaaattcggagagttaacact 32889874  T
Q  304 cgatttgcggaacattgctttga 326  Q
    |||||||||||||||||||||||    
T  32889873 cgatttgcggaacattgctttga 32889851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 210 - 320
Target Start/End: Complemental strand, 32322586 - 32322476
Alignment:
Q  210 cctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgattt 309  Q
    |||| |||||||||||||||| ||||||||||  || ||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||| ||    
T  32322586 ccttccgattttaccagaaaccgagtttacctcagaattaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgactt 32322487  T
Q  310 gcggaacattg 320  Q
    |||||||||||    
T  32322486 gcggaacattg 32322476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 29510092 - 29510208
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||||||  |||||||||||||| ||||||||| |  ||||||||||||||||| |||||||| ||||||||||  ||| |||||||||||||||||    
T  29510092 gtcaaaccttctgattttaccagaaattgagtttacatcagagttaacacgattttgatacctaaacacgtaaactcgataaactcggagagttaacact 29510191  T
Q  304 cgatttgcggaacattg 320  Q
    |||||||||||||||||    
T  29510192 cgatttgcggaacattg 29510208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 30967021 - 30967134
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | ||||||||||||||  | |||| ||  |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  30967021 aaaccttccaattttaccagaaaccaattttatctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcga 30967120  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  30967121 tttgcggaacattg 30967134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 5800487 - 5800374
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    |||||||  ||| ||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| ||||||||||||||||||||    
T  5800487 aaaccttctgatgttaccagaaaccgaatttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagagttaacactcga 5800388  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  5800387 tttgcggaacattg 5800374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 23987719 - 23987607
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | ||||||||||||||  | |||||||  |||||||||||||||| |||||||||||||||||||| |||| ||||||||| ||||||||||    
T  23987719 aaaccttccaattttaccagaaaccaa-tttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagaggtaacactcga 23987621  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  23987620 tttgcggaacattg 23987607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 27768587 - 27768474
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| |||||||| |||||||||||    
T  27768587 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 27768488  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  27768487 tttgcggaacattg 27768474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 319
Target Start/End: Complemental strand, 28484419 - 28484306
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacga-ttttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcg 305  Q
    ||||||| | |||||||||||||| ||||||||||  |||||||||||| |||| |||||||||||||||||||| |||| ||| ||||||||||||||     
T  28484419 aaaccttccaattttaccagaaaccgagtttacctcagagttaacacgactttttgtacctaaaaacgtaaactcggtaatctcagagagttaacactca 28484320  T
Q  306 atttgcggaacatt 319  Q
    ||||||||||||||    
T  28484319 atttgcggaacatt 28484306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 41725636 - 41725523
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| |||||||||||||||  ||||||||||  |||||||||||||||| |||||||||||||||||||  |||| | ||||||||||||||||||    
T  41725636 aaaccttccgattttaccagaaatcgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactaggtaatcacggagagttaacactcga 41725537  T
Q  307 tttgcggaacattg 320  Q
    ||||  ||||||||    
T  41725536 tttgaagaacattg 41725523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 49834512 - 49834625
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| |||||||||||||||| ||||||||||  |||||||||||||||| ||| |||||||||||||||| |||| ||  |||||||||||||| |    
T  49834512 aaaccttccgattttaccagaaaccgagtttacctcagagttaacacgatttttgtagctaaaaacgtaaactcggtaatcttagagagttaacactcaa 49834611  T
Q  307 tttgcggaacattg 320  Q
    ||| ||||||||||    
T  49834612 tttacggaacattg 49834625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 50018715 - 50018602
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  ||||||||| |||||| ||||||||||| |||||||| |||| ||||||||||||||||||||    
T  50018715 aaaccttccaattttaccagaaaccgattttacctcagagttaacatgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcga 50018616  T
Q  307 tttgcggaacattg 320  Q
    ||||| ||||||||    
T  50018615 tttgcagaacattg 50018602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 54341665 - 54341552
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||||| |||||||||||||| || |||||||  ||||| |||||||||| ||||||||||| ||||||||  ||| |||||||| |||||||||||    
T  54341665 aaacctttcaattttaccagaaaccgattttacctcagagtttacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 54341566  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  54341565 tttgcggaacattg 54341552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 33138885 - 33138771
Alignment:
Q  196 ttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagag 295  Q
    ||||||| |||||||||| |||||||||||||||  ||||||||||  |||||||||||||||||||||||||| |||||||         |||||||||    
T  33138885 ttaactcagtcaaaccttccgattttaccagaaatcgagtttacctccgagttaacacgattttggtacctaaacacgtaaa---------ctcggagag 33138795  T
Q  296 ttaacactcgatttgcggaacatt 319  Q
    ||||||||||||||||||||||||    
T  33138794 ttaacactcgatttgcggaacatt 33138771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 48261601 - 48261488
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| || |||||  ||| |||||||| |||||||||||    
T  48261601 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtcaactcgataatctcggagatttaacactcga 48261502  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  48261501 tttgcggaacattg 48261488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 51321379 - 51321266
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || ||||| |  |||||||||||||||| ||||||||||| ||||||||  |||  |||||||||||||||||||    
T  51321379 aaaccttccaattttaccagaaaccgattttacgtcagagttaacacgatttttgtacctaaaaatgtaaactcgataatatcggagagttaacactcga 51321280  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  51321279 tttgcggaacattg 51321266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 23671400 - 23671516
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| ||||||||| ||||||||  ||||||||||  |||||||||||||||||||||||||| |||||||  | |||| ||| ||| | |||||||    
T  23671400 gtcaaacttttcgatttcaccagaaatcgagtttacctccgagttaacacgattttggtacctaaacacgtaaaaccggtaaactcagagtgctaacact 23671499  T
Q  304 cgatttgcggaacattg 320  Q
    |||||||||||||||||    
T  23671500 cgatttgcggaacattg 23671516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 5441925 - 5441812
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| |||||||| |||||| ||||    
T  5441925 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacattcga 5441826  T
Q  307 tttgcggaacattg 320  Q
    ||| ||||||||||    
T  5441825 tttacggaacattg 5441812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 29856039 - 29855926
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||  ||||||||||  |||||||||||||||| |||| ||||||||||||||| |||| |||||||| |||| ||||||    
T  29856039 aaaccttccaattttaccagaaatcgagtttacctcagagttaacacgatttttgtacataaaaacgtaaactcggtaatctcggagaattaatactcga 29855940  T
Q  307 tttgcggaacattg 320  Q
    |||  |||||||||    
T  29855939 tttatggaacattg 29855926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 37828108 - 37828221
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||| ||||||| ||||||||  ||| |||||||| |||||| ||||    
T  37828108 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtatctaaaaatgtaaactcgataatctcggagatttaacattcga 37828207  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  37828208 tttgcggaacattg 37828221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 217 - 320
Target Start/End: Original strand, 54853164 - 54853267
Alignment:
Q  217 attttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaac 316  Q
    ||||||| |||||| || |||||||  |||||||||| ||||| |||| |||||| |||||||| |||| |||||||||||||||||||||||| |||||    
T  54853164 attttacgagaaaccgattttacctcagagttaacacaatttttgtacataaaaaggtaaactcggtaatctcggagagttaacactcgatttgtggaac 54853263  T
Q  317 attg 320  Q
    ||||    
T  54853264 attg 54853267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 204 - 309
Target Start/End: Complemental strand, 871886 - 871782
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| || |||||||||||||||  ||||||||||  ||||| ||||||||| ||||||||||||||||||||| |||| ||||  |||||||||||    
T  871886 gtcaaacattccgattttaccagaaatcgagtttacctccgagttgacacgattt-ggtacctaaaaacgtaaactcggtaaactcgacgagttaacact 871788  T
Q  304 cgattt 309  Q
    ||||||    
T  871787 cgattt 871782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 204 - 321
Target Start/End: Complemental strand, 46286786 - 46286678
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    |||||||||| ||| ||||| |||||  ||||||||||  | ||||||||||||||||||||||||||||||||         |||||||||||||||||    
T  46286786 gtcaaaccttccgagtttactagaaatcgagtttaccttagtgttaacacgattttggtacctaaaaacgtaaa---------ctcggagagttaacact 46286696  T
Q  304 cgatttgcggaacattgc 321  Q
    ||||||||||||||||||    
T  46286695 cgatttgcggaacattgc 46286678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 50517270 - 50517163
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    |||||||||| | |||||||||||||  ||||||||||   ||||||||||||||||||||||||| |||||||         |||||||||||||||||    
T  50517270 gtcaaaccttccaattttaccagaaatcgagtttacctcaaagttaacacgattttggtacctaaacacgtaaa---------ctcggagagttaacact 50517180  T
Q  304 cgatttgcggaacattg 320  Q
    |||||||||||||||||    
T  50517179 cgatttgcggaacattg 50517163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 216 - 320
Target Start/End: Complemental strand, 55165590 - 55165486
Alignment:
Q  216 gattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaa 315  Q
    |||||||||| |||   |||||||||   |||||| ||||||||||||| |||||||||||||||||||| ||||  |||||| ||||||||||| ||||    
T  55165590 gattttaccataaatcaagtttacctccaagttaatacgattttggtacgtaaaaacgtaaactcagtaaactcgacgagttagcactcgatttgtggaa 55165491  T
Q  316 cattg 320  Q
    |||||    
T  55165490 cattg 55165486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 26491149 - 26491227
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcag 282  Q
    ||||||||||  ||||||||||||||| ||||||||||   | ||||||||||||||||||||||| ||||||||||||    
T  26491149 gtcaaaccttctgattttaccagaaaccgagtttacctcaaatttaacacgattttggtacctaaacacgtaaactcag 26491227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 247 - 320
Target Start/End: Original strand, 32683746 - 32683818
Alignment:
Q  247 ttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattg 320  Q
    ||||||||||||| |||||||||||||||| ||| |||| ||| |||||||||||||||||||| |||||||||    
T  32683746 ttaacacgatttttgtacctaaaaacgtaa-ctcggtaatctctgagagttaacactcgatttgtggaacattg 32683818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 320
Target Start/End: Complemental strand, 37916287 - 37916211
Alignment:
Q  244 gagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattg 320  Q
    |||||||||| ||||| |||| |||||| ||||||||  ||| |||||||||||||||||| |||||||||||||||    
T  37916287 gagttaacacaatttttgtacataaaaatgtaaactcgataatctcggagagttaacactcaatttgcggaacattg 37916211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 204 - 323
Target Start/End: Complemental strand, 29469240 - 29469121
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| || |||||||||||||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  || || ||||     
T  29469240 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgaattgacacg 29469141  T
Q  304 cgatttgcggaacattgctt 323  Q
    ||||||| | ||||||||||    
T  29469140 cgatttgtgaaacattgctt 29469121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 319
Target Start/End: Original strand, 24966547 - 24966651
Alignment:
Q  206 caaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcg 305  Q
    |||||||| | ||||||||| |||| || ||||| |  |||||||||||||||||||||||||| |||||||         |||||||||||||||||||    
T  24966547 caaaccttcccattttaccaaaaaccgaatttacttccgagttaacacgattttggtacctaaacacgtaaa---------ctcggagagttaacactcg 24966637  T
Q  306 atttgcggaacatt 319  Q
    ||||||| ||||||    
T  24966638 atttgcgaaacatt 24966651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 8084286 - 8084170
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| || ||||||||| |||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| ||||     
T  8084286 gtcaaactttccgattttactagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacg 8084187  T
Q  304 cgatttgcggaacattg 320  Q
    || |||| |||||||||    
T  8084186 cggtttgtggaacattg 8084170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 204 - 280
Target Start/End: Complemental strand, 51967354 - 51967278
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||| ||||||||| |||| |||| ||||||||||  ||||||||||| |||||  ||||||||||||||||||    
T  51967354 gtcaaacttttcgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactc 51967278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 204 - 281
Target Start/End: Original strand, 42937437 - 42937514
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactca 281  Q
    ||||||| ||||||||||||||||||  ||||||||||  ||||||| ||| |||| | ||||||| |||||||||||    
T  42937437 gtcaaacttttcgattttaccagaaatcgagtttacctccgagttaaaacgcttttagcacctaaatacgtaaactca 42937514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 276
Target Start/End: Original strand, 41470344 - 41470424
Alignment:
Q  196 ttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaa 276  Q
    ||||||||||||||| || | |||| |||| |||| ||||||||||  ||||||||||| |||||  ||||||||||||||    
T  41470344 ttaactcggtcaaactttccaatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaa 41470424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 46862941 - 46863017
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||||||||||||||||||||||  || ||||| |   ||||||||| ||||| ||||||||| ||||||||||    
T  46862941 gtcaaacctttcgattttaccagaaatcgaatttacttcatagttaacacaattttagtacctaaacacgtaaactc 46863017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 6487344 - 6487420
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||| || |||||| |||| |||  ||||||||||  ||||||||||| |||||  ||||||||||||||||||    
T  6487344 gtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactc 6487420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 40487703 - 40487763
Alignment:
Q  222 accagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcag 282  Q
    |||| |||| ||||||||||  ||||||||||| |||||  ||||||||||||||||||||    
T  40487703 accaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactcag 40487763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 280
Target Start/End: Original strand, 56424002 - 56424077
Alignment:
Q  205 tcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    |||||| || |||||| || | |||| ||||||||||  ||||||||||| |||||  ||||||||||||||||||    
T  56424002 tcaaactttccgatttcactaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactc 56424077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 282
Target Start/End: Original strand, 2326680 - 2326765
Alignment:
Q  196 ttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcag 282  Q
    ||||||||||||| | |||| ||||||| |||||   ||||||| |   |||| |||||||||||||||||||||||||||| ||||    
T  2326680 ttaactcggtcaa-cttttcaattttactagaaaacaagtttacatccaagtttacacgattttggtacctaaaaacgtaaattcag 2326765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 319
Target Start/End: Complemental strand, 12754526 - 12754489
Alignment:
Q  282 gtaagctcggagagttaacactcgatttgcggaacatt 319  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  12754526 gtaaactcggcgagttaacactcgatttgcggaacatt 12754489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 12754592 - 12754539
Alignment:
Q  185 tttatcgagttttaactcggtcaaacctttcgattttaccagaaactgagttta 238  Q
    |||| ||||| ||||||||||||||| ||  ||||||||||||||| |||||||    
T  12754592 tttaccgagtgttaactcggtcaaactttctgattttaccagaaacagagttta 12754539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 280
Target Start/End: Complemental strand, 14334460 - 14334395
Alignment:
Q  215 cgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||||||| |||   ||||||| |  ||||| || ||||||||||||||||||||||||||||    
T  14334460 cgattttaccaaaaaacaagtttacgtccgagtttacgcgattttggtacctaaaaacgtaaactc 14334395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 204 - 312
Target Start/End: Original strand, 39311 - 39419
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||||||||||||||||||||||| ||||| ||||  | ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  39311 gtcaaacctttcgattttaccagaaaccgagttgacctcagggttaacacgattttggtacctaaaaacgtaaactcggtaatctcggagagttaacact 39410  T
Q  304 cgatttgcg 312  Q
    |||||||||    
T  39411 cgatttgcg 39419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 205 - 323
Target Start/End: Original strand, 929 - 1047
Alignment:
Q  205 tcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactc 304  Q
    |||||| || |||||||||||||||| ||||||||||  |||||||||||||||||||||||||| |||||||||| |||| ||| ||| ||||||||||    
T  929 tcaaactttccgattttaccagaaaccgagtttacctccgagttaacacgattttggtacctaaacacgtaaactcggtaaactcagagtgttaacactc 1028  T
Q  305 gatttgcggaacattgctt 323  Q
    |||||||||||||||||||    
T  1029 gatttgcggaacattgctt 1047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 57743 - 57856
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    |||||||  |||||||| |||||| ||||||||||  |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  57743 aaaccttctgattttactagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcga 57842  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  57843 tttgcggaacattg 57856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 4e-36; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 52810879 - 52810766
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| |||||||||||||| | ||||||||||  |||||||||| ||||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  52810879 aaaccttccgattttaccagaacccgagtttacctcagagttaacacaatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcga 52810780  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  52810779 tttgcggaacattg 52810766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 207 - 315
Target Start/End: Complemental strand, 20833418 - 20833310
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| |||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||  ||| ||| ||||||||||||||||    
T  20833418 aaaccttccgattttaccagaaactgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgataatctcagagagttaacactcga 20833319  T
Q  307 tttgcggaa 315  Q
    |||||||||    
T  20833318 tttgcggaa 20833310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 21386508 - 21386624
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| ||||||||||||||||||  |||||||||| | |||||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  21386508 gtcaaacttttcgattttaccagaaatcgagtttacctctaagttaacacgattttgatacctaaaaatgtaaactcggtaaactcggagagttaacact 21386607  T
Q  304 cgatttgcggaacattg 320  Q
    ||||||| |||||||||    
T  21386608 cgatttggggaacattg 21386624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 166 - 320
Target Start/End: Complemental strand, 48379721 - 48379558
Alignment:
Q  166 tcggtcaattttacacgaatttatcgagttttaactcggtcaaac---------ctttcgattttaccagaaactgagtttacctatgagttaacacgat 256  Q
    |||||||| ||||||||| |||| ||||| ||||||| |||||||         ||| |||||||||||||||  ||||||||||  || ||||||||||    
T  48379721 tcggtcaagtttacacgagtttaccgagtgttaactcagtcaaactcgttaagccttccgattttaccagaaatcgagtttacctcagaattaacacgat 48379622  T
Q  257 tttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattg 320  Q
    ||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  48379621 ttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgcggaacattg 48379558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 37455368 - 37455255
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| |||||||||||||||| ||| |||| ||||||||||||||||||||    
T  37455368 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaagctcggtaatctcggagagttaacactcga 37455269  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  37455268 tttgcggaacattg 37455255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 52617651 - 52617764
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| |||||||||||||||| ||||||||||  |||||||||||||||| ||||||||||||||||| ||  ||| ||| ||||||||||||||||    
T  52617651 aaaccttccgattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaattcgataatctcagagagttaacactcga 52617750  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  52617751 tttgcggaacattg 52617764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 207 - 318
Target Start/End: Complemental strand, 17946749 - 17946638
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| |||||||||||||||| ||||||||||  ||||||||| |||||| ||||||||||||||||||||  ||| |||||||| |||||||||||    
T  17946749 aaaccttccgattttaccagaaaccgagtttacctcagagttaacatgatttttgtacctaaaaacgtaaactcgataatctcggagaattaacactcga 17946650  T
Q  307 tttgcggaacat 318  Q
    ||||||||||||    
T  17946649 tttgcggaacat 17946638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 217 - 320
Target Start/End: Complemental strand, 18750154 - 18750051
Alignment:
Q  217 attttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaac 316  Q
    |||||||||||||| ||||||||||  ||||||||| |||||| |||||||||||||||||||||||||  || ||||||||||||||||||||||||||    
T  18750154 attttaccagaaaccgagtttacctcagagttaacatgatttttgtacctaaaaacgtaaactcagtaatatcagagagttaacactcgatttgcggaac 18750055  T
Q  317 attg 320  Q
    ||||    
T  18750054 attg 18750051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 7437600 - 7437710
Alignment:
Q  209 acctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatt 308  Q
    ||||| ||||||||||| |||| ||||||| ||  | |||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||    
T  7437600 accttccgattttaccaaaaaccgagtttatctccgtgttaacacgattttggtacctaaacaagtaaactcagtaaactcggagagttaacactcgatt 7437699  T
Q  309 tgcggaacatt 319  Q
    |||||||||||    
T  7437700 tgcggaacatt 7437710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 31645940 - 31646053
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| |||||||||||||||| ||| |||| ||||||||||||||||||||    
T  31645940 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaagctcggtaatctcggagagttaacactcga 31646039  T
Q  307 tttgcggaacattg 320  Q
    |||||| |||||||    
T  31646040 tttgcgaaacattg 31646053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 51737366 - 51737479
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| ||||||||| |||||| ||||||||||  |||||||||||||||| ||||||||||| ||||||||  ||| ||| ||||||||||||||||    
T  51737366 aaaccttccgattttactagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcagagagttaacactcga 51737465  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  51737466 tttgcggaacattg 51737479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 54629372 - 54629259
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    |||||||||| ||||| ||||||  ||||||||||  |||||||||||||||| |||||||||||||||||||| |||| ||| |||||||||||||| |    
T  54629372 aaacctttcgcttttatcagaaatcgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcagagagttaacactcaa 54629273  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  54629272 tttgcggaacattg 54629259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 216 - 320
Target Start/End: Original strand, 44905543 - 44905647
Alignment:
Q  216 gattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaa 315  Q
    ||||||||||||||| ||| ||||||  || ||||||||||||| |||||||| ||||||||||| |||| |||||||||||||||||||||||||||||    
T  44905543 gattttaccagaaaccgagattacctcagaattaacacgatttttgtacctaagaacgtaaactcggtaatctcggagagttaacactcgatttgcggaa 44905642  T
Q  316 cattg 320  Q
    |||||    
T  44905643 cattg 44905647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 23753068 - 23753181
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | ||||||||| |||| || |||||||  |||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||    
T  23753068 aaaccttccaattttaccaaaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcga 23753167  T
Q  307 tttgcggaacattg 320  Q
    |||||| |||||||    
T  23753168 tttgcgaaacattg 23753181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 26107850 - 26107737
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| ||||| |||||||||  ||||||||||  ||||||||| |||||| ||||||||||||||||||||  ||| |||||||||||| |||||||    
T  26107850 aaaccttccgattgtaccagaaatcgagtttacctcagagttaacatgatttttgtacctaaaaacgtaaactcgttaatctcggagagttatcactcga 26107751  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  26107750 tttgcggaacattg 26107737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 39038611 - 39038498
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| |||||||||||||||| ||||||||||  |||||||||| ||||| ||||||||||||||||| ||  ||| ||| ||||||||||||||||    
T  39038611 aaaccttccgattttaccagaaaccgagtttacctcagagttaacaccatttttgtacctaaaaacgtaaattcgataatctcagagagttaacactcga 39038512  T
Q  307 tttgcggaacattg 320  Q
    |||| |||||||||    
T  39038511 tttgtggaacattg 39038498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 137 - 311
Target Start/End: Complemental strand, 33693409 - 33693226
Alignment:
Q  137 ttatatttttagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttttaactcggtcaaac---------ctttcgattttaccaga 227  Q
    |||| ||||||||||||||| ||||||| |||||| | ||||||||| |||| ||||| |||||||||||||||         |||  ||||||||||||    
T  33693409 ttatctttttagatgtaaacacgtaaaactcggtcgagtttacacgagtttaccgagtgttaactcggtcaaactcgtcaaaccttctgattttaccaga 33693310  T
Q  228 aactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgc 311  Q
    ||  ||||||||||   |||||||||||||||||||  ||||| | ||||||| |||| ||||||||||||||| |||||||||    
T  33693309 aatcgagtttacctccaagttaacacgattttggtatgtaaaatcataaactcggtaaactcggagagttaacattcgatttgc 33693226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 40897652 - 40897539
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||| ||||||| || |||||||  |||||||||||||||| |||||||||| |||||| || |||| ||||||||||||||||||||    
T  40897652 aaaccttccaattttatcagaaaccgattttacctcagagttaacacgatttttgtacctaaaatcgtaaattcggtaatctcggagagttaacactcga 40897553  T
Q  307 tttgcggaacattg 320  Q
    | ||||||||||||    
T  40897552 tctgcggaacattg 40897539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 235 - 320
Target Start/End: Original strand, 50761807 - 50761892
Alignment:
Q  235 tttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattg 320  Q
    |||||||  |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||    
T  50761807 tttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgctgaacattg 50761892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 50902988 - 50903101
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| ||||||||||  |||||||||||||||| |||| |||||||||||||||  ||  ||||||||||||||||||||    
T  50902988 aaaccttccaattttaccagaaaccgagtttacctcagagttaacacgatttttgtacataaaaacgtaaactcgatattctcggagagttaacactcga 50903087  T
Q  307 tttgcggaacattg 320  Q
     ||||| |||||||    
T  50903088 cttgcgaaacattg 50903101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 136 - 277
Target Start/End: Complemental strand, 16155318 - 16155168
Alignment:
Q  136 attatatttttagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttttaactcggtcaaac---------ctttcgattttaccag 226  Q
    ||||| ||||||||||||||||||||||| |||||| | ||||||||| ||||  |||| |||||||||||||||         ||| | |||||| ||     
T  16155318 attatttttttagatgtaaactcgtaaaactcggtcgagtttacacgagtttactgagtgttaactcggtcaaactcgtcaaaccttccaattttatcaa 16155219  T
Q  227 aaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaa 277  Q
    |||| ||||||||||  ||||||||||||||||||||||||||||||||||    
T  16155218 aaaccgagtttacctcagagttaacacgattttggtacctaaaaacgtaaa 16155168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 205 - 319
Target Start/End: Complemental strand, 43173003 - 43172889
Alignment:
Q  205 tcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactc 304  Q
    |||||||||||||||||||||||||  ||||||||||  |||| ||||||||||||||||||||| || |||||||  ||| ||   |||||||||| ||    
T  43173003 tcaaacctttcgattttaccagaaatcgagtttacctccgagtcaacacgattttggtacctaaacacataaactcgataaacttaaagagttaacattc 43172904  T
Q  305 gatttgcggaacatt 319  Q
    |||||||||||||||    
T  43172903 gatttgcggaacatt 43172889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 204 - 321
Target Start/End: Original strand, 4962755 - 4962872
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||||||||||||||||  ||||  ||||||||||   |||||||||||||||| |||||||||||||||||||  ||| ||  |||||||||| ||    
T  4962755 gtcaaacctttcgattttacttgaaatcgagtttacctccaagttaacacgattttgatacctaaaaacgtaaactcgataaacttagagagttaacgct 4962854  T
Q  304 cgatttgcggaacattgc 321  Q
    | ||||||||||||||||    
T  4962855 caatttgcggaacattgc 4962872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 215 - 320
Target Start/End: Complemental strand, 7665657 - 7665552
Alignment:
Q  215 cgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcgga 314  Q
    ||||||||||| |||  ||||||||||  |||||||||||||||||||| |||||||||||||||  ||||  |||| |||||||||||||||||| |||    
T  7665657 cgattttaccaaaaatcgagtttacctccgagttaacacgattttggtagctaaaaacgtaaactaggtaaattcggcgagttaacactcgatttgtgga 7665558  T
Q  315 acattg 320  Q
    ||||||    
T  7665557 acattg 7665552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 204 - 308
Target Start/End: Original strand, 45602441 - 45602545
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| |||||||||||||||||| |||||||||||| ||||| |||| |||||  |||| ||||||||||| || |||| ||||| |||||||||||    
T  45602441 gtcaaacatttcgattttaccagaaattgagtttacctacgagttgacacaattttaatacccaaaaacgtaaattcggtaaactcggcgagttaacact 45602540  T
Q  304 cgatt 308  Q
    |||||    
T  45602541 cgatt 45602545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 320
Target Start/End: Complemental strand, 45863307 - 45863231
Alignment:
Q  244 gagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattg 320  Q
    |||||||||||||||| ||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||||||    
T  45863307 gagttaacacgatttttgtacctaaaaacgtaaactctttaatctcagagagttaacactcgatttgcggaacattg 45863231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 36673831 - 36673944
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| |||| |||||| || |||||  ||| |||||||| |||||||||||    
T  36673831 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacttaaaaatgtcaactcgataatctcggagatttaacactcga 36673930  T
Q  307 tttgcggaacattg 320  Q
    ||||| ||||||||    
T  36673931 tttgcagaacattg 36673944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 49296193 - 49296077
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| ||||||||||||||||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| ||||     
T  49296193 gtcaaacttttcgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacg 49296094  T
Q  304 cgatttgcggaacattg 320  Q
    ||||||| |||||||||    
T  49296093 cgatttgtggaacattg 49296077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 8598736 - 8598620
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| || |||||||||||||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| ||||     
T  8598736 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacg 8598637  T
Q  304 cgatttgcggaacattg 320  Q
    ||||||| |||||||||    
T  8598636 cgatttgtggaacattg 8598620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 219 - 319
Target Start/End: Original strand, 21718452 - 21718552
Alignment:
Q  219 tttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacat 318  Q
    ||||| |||||  ||||||| || |||||| |||||||||||||| || ||||||||||||||||||  |||  |||||||||||||||||  |||||||    
T  21718452 tttactagaaatcgagtttatctttgagttgacacgattttggtatcttaaaacgtaaactcagtaaaatcgacgagttaacactcgatttttggaacat 21718551  T
Q  319 t 319  Q
    |    
T  21718552 t 21718552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 205 - 280
Target Start/End: Complemental strand, 25049947 - 25049872
Alignment:
Q  205 tcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    |||||| || ||||||||| |||||  ||||||||||  ||||| |||||||||||||||||||||||||||||||    
T  25049947 tcaaacattccgattttactagaaatcgagtttacctccgagttgacacgattttggtacctaaaaacgtaaactc 25049872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 144 - 280
Target Start/End: Complemental strand, 49458504 - 49458359
Alignment:
Q  144 tttagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttttaactcggtcaaac---------ctttcgattttaccagaaactgag 234  Q
    ||||||||||||||||||||| |||||| | ||||||||| ||||  |||| |||| | ||||||||         ||| |||||||||||||||  |||    
T  49458504 tttagatgtaaactcgtaaaactcggtcgagtttacacgagtttactgagtgttaatttggtcaaactcgtcaaaccttccgattttaccagaaatcgag 49458405  T
Q  235 tttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||| |  |||||||||| |||||| |||||||| ||||||||||    
T  49458404 tttacttcagagttaacacaattttgatacctaaacacgtaaactc 49458359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 42736384 - 42736268
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| ||| |||||||||||||||| |||||| ||    |||||||||||||||||| ||||||||| ||||||  ||| ||||   | ||||||||    
T  42736384 gtcaaactttttgattttaccagaaactaagtttatctcaatgttaacacgattttggtatctaaaaacgcaaactcgataaactcgacaaattaacact 42736285  T
Q  304 cgatttgcggaacattg 320  Q
     ||||| ||||||||||    
T  42736284 tgatttacggaacattg 42736268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 207 - 280
Target Start/End: Original strand, 22489511 - 22489584
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||| |||||||||||||||  |||||||| | ||| |||||||| |||||| ||||||| ||||||||||    
T  22489511 aaaccttccgattttaccagaaatcgagtttacatctgatttaacacgtttttggcacctaaacacgtaaactc 22489584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 53836039 - 53835923
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| || |||||||||||||||   |||||||||   |||||||||| |||| | ||||||| |||||||||| |||| ||||  || || ||||     
T  53836039 gtcaaactttccgattttaccagaaatcaagtttacctccaagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgaattgacacg 53835940  T
Q  304 cgatttgcggaacattg 320  Q
    ||||||| |||||||||    
T  53835939 cgatttgtggaacattg 53835923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 53645337 - 53645415
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcag 282  Q
    ||||||| || |||||| |||| ||||||||||||||| |||||| | ||| |||||  |||||||||||| |||||||    
T  53645337 gtcaaactttccgatttcaccaaaaactgagtttacctctgagtttatacgtttttgccacctaaaaacgttaactcag 53645415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 9818588 - 9818664
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||| || |||||| |||| |||  ||||||||||  ||||||||||| |||||  ||||||||||||||||||    
T  9818588 gtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactc 9818664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 204 - 280
Target Start/End: Complemental strand, 40064355 - 40064279
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||| ||||||||| |||| ||||| | |||||||   |||| ||||| |||||  ||||||||||||||||||    
T  40064355 gtcaaacttttcgatttcaccaaaaactaaatttacctccaagtttacacgtttttgccacctaaaaacgtaaactc 40064279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 2e-35; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 216 - 320
Target Start/End: Original strand, 214945 - 215049
Alignment:
Q  216 gattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaa 315  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| || |||| |||||| ||||||||||| ||||||||||    
T  214945 gattttaccagaaactgagtttaccttagagttaacacgattttggtacctaaaaacgtaaattcggtaatctcggaaagttaacactcaatttgcggaa 215044  T
Q  316 cattg 320  Q
    |||||    
T  215045 cattg 215049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 6224256 - 6224369
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| ||||||||| |||||| ||||| ||||| |||||||||||||||  ||||||||||||||||||||  ||| ||||||||||||||||||||    
T  6224256 aaaccttccgattttactagaaaccgagttcacctaagagttaacacgatttgtgtacctaaaaacgtaaactcgataatctcggagagttaacactcga 6224355  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  6224356 tttgcggaacattg 6224369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 204 - 321
Target Start/End: Complemental strand, 15224307 - 15224190
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| ||||||||| ||||||||  |||||||||| ||||||||||||||||||||||||||| ||||||| |  |||| ||||||| |||||||||    
T  15224307 gtcaaacttttcgatttcaccagaaatcgagtttacctctgagttaacacgattttggtacctaaacacgtaaaattggtaaactcggagtgttaacact 15224208  T
Q  304 cgatttgcggaacattgc 321  Q
    ||||||||||||||||||    
T  15224207 cgatttgcggaacattgc 15224190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 28739973 - 28740086
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| |||||||||||| ||||||| |||| ||||||||||||||||||||    
T  28739973 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacataaactcggtaatctcggagagttaacactcga 28740072  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  28740073 tttgcggaacattg 28740086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 7027426 - 7027313
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||||| |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| |||||||| |||||||||||    
T  7027426 aaacctttcaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 7027327  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  7027326 tttgcggaacattg 7027313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 25288686 - 25288573
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| ||||||||| |||||| ||||||||||  |||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||| | ||||    
T  25288686 aaaccttccgattttactagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaatattcga 25288587  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  25288586 tttgcggaacattg 25288573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 34342315 - 34342199
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    |||||||||| ||| |||||||||||| ||||||||||  | | ||||| |  |||||||||||||||||||||||| |||| ||| |||||||||||||    
T  34342315 gtcaaaccttccgagtttaccagaaaccgagtttaccttagtgctaacatggatttggtacctaaaaacgtaaactcggtaaactcagagagttaacact 34342216  T
Q  304 cgatttgcggaacattg 320  Q
    |||||||||||||||||    
T  34342215 cgatttgcggaacattg 34342199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 204 - 319
Target Start/End: Complemental strand, 40829713 - 40829596
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaa--gctcggagagttaaca 301  Q
    |||||||||||| |||||||||||||| ||||||||||  ||||||||||||||||| |||||||||| ||| |||| ||||   |||||||||||||||    
T  40829713 gtcaaacctttctattttaccagaaaccgagtttacctccgagttaacacgattttgatacctaaaaatgtagactcggtaaactctcggagagttaaca 40829614  T
Q  302 ctcgatttgcggaacatt 319  Q
    ||| |||| |||||||||    
T  40829613 ctcaatttacggaacatt 40829596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 10657953 - 10657840
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | ||||||||| |||  || |||||||  |||||||||||||||| |||||||||||||||||||| |||| ||| ||||||||||||||||    
T  10657953 aaaccttccaattttaccaaaaatcgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcagagagttaacactcga 10657854  T
Q  307 tttgcggaacattg 320  Q
    ||| ||||||||||    
T  10657853 tttacggaacattg 10657840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 28845108 - 28844995
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||| ||||||| || |||||||  |||||||||||||||| |||||||||||| |||||||  ||| ||||||||||||||||||||    
T  28845108 aaaccttccaattttatcagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacataaactcgataatctcggagagttaacactcga 28845009  T
Q  307 tttgcggaacattg 320  Q
    |||||||| |||||    
T  28845008 tttgcggatcattg 28844995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 216 - 320
Target Start/End: Original strand, 13833107 - 13833211
Alignment:
Q  216 gattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaa 315  Q
    |||||||| ||||| |||||||||||  |||||||||||||||| ||||||||||||||||||||  ||| |||| |||||||||| || ||||||||||    
T  13833107 gattttactagaaattgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgataatctcgaagagttaacattcaatttgcggaa 13833206  T
Q  316 cattg 320  Q
    |||||    
T  13833207 cattg 13833211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 210 - 320
Target Start/End: Complemental strand, 379450 - 379340
Alignment:
Q  210 cctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgattt 309  Q
    |||| |||||||| || |||| || |||||||  |||||||||||||||| ||||||||||||||||| || |||| |||  ||||||||||||||||||    
T  379450 ccttccgattttatcaaaaaccgaatttacctcagagttaacacgatttttgtacctaaaaacgtaaattcggtaatctcaaagagttaacactcgattt 379351  T
Q  310 gcggaacattg 320  Q
    |||||||||||    
T  379350 gcggaacattg 379340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 140 - 309
Target Start/End: Original strand, 2308665 - 2308843
Alignment:
Q  140 tatttttagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttttaactcggtcaaacctttc---------gattttaccagaaac 230  Q
    |||||||||| |||||||||||||| ||| || | ||||||||| |||| ||||| |||||| |||||||| | ||         |||||||||| ||||    
T  2308665 tatttttagaagtaaactcgtaaaactcgatcgagtttacacgattttaccgagtgttaacttggtcaaacttgtcaaactttttgattttaccacaaac 2308764  T
Q  231 tgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgattt 309  Q
     || |||||||  ||||||||||||||||||||| |||||||||||| | | ||| ||||| |||||||||||||||||    
T  2308765 cgaatttacctccgagttaacacgattttggtacataaaaacgtaaatttaataaactcggcgagttaacactcgattt 2308843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 33136139 - 33136028
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| ||||| |||||||||  ||||||||||  |||||||||||||||| |||||||||||| ||||||| ||   ||| ||||||||||||||||    
T  33136139 aaaccttccgattataccagaaatcgagtttacctcagagttaacacgatttttgtacctaaaaacataaactcggt--tctcagagagttaacactcga 33136042  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  33136041 tttgcggaacattg 33136028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 3575364 - 3575251
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  ||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||| | ||||    
T  3575364 aaaccttccaattttaccagaaaccgattttacctcagagttaacatgatttttgtacctaaaaacgtaaactcagtaatctcggatagttaatattcga 3575265  T
Q  307 tttgcggaacattg 320  Q
    |||| || ||||||    
T  3575264 tttgagggacattg 3575251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 26789308 - 26789195
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| || |||||  ||| |||||||| |||||||||||    
T  26789308 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtcaactcgataatctcggagatttaacactcga 26789209  T
Q  307 tttgcggaacattg 320  Q
    ||||| ||||||||    
T  26789208 tttgcagaacattg 26789195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 142 - 321
Target Start/End: Original strand, 31847171 - 31847360
Alignment:
Q  142 tttttagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttttaactcggtc---------aaacctttcgattttaccagaaactg 232  Q
    ||||||||| ||||||||||||| |||||||  ||||||||| |||| ||||| |||| ||||||         |||||||  ||||||| ||||||  |    
T  31847171 tttttagatttaaactcgtaaaactcggtcatgtttacacgagtttaccgagtgttaattcggtcgaactcgtcaaaccttctgattttatcagaaatag 31847270  T
Q  233 agtttacctatgagttaacacgattttggtacctaaaaacgtaaa-ctcagtaagctcggagagttaacactcgatttgcggaacattgc 321  Q
    |||||||||  |||||| || ||||||  |||||||||||||||| |||  ||| |||||||||||||||||||||||| ||||||||||    
T  31847271 agtttacctccgagttaccatgattttaatacctaaaaacgtaaaactcgataaactcggagagttaacactcgatttgaggaacattgc 31847360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 217 - 320
Target Start/End: Complemental strand, 18177784 - 18177681
Alignment:
Q  217 attttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaac 316  Q
    |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| |||| ||| |||||||||||||| ||||||    
T  18177784 attttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcgaagatttaacactcgatttacggaac 18177685  T
Q  317 attg 320  Q
    ||||    
T  18177684 attg 18177681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 204 - 321
Target Start/End: Original strand, 18899952 - 18900069
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| || ||||||||| |||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| ||||     
T  18899952 gtcaaactttccgattttactagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacg 18900051  T
Q  304 cgatttgcggaacattgc 321  Q
    ||||||| ||||||||||    
T  18900052 cgatttgtggaacattgc 18900069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 3464115 - 3464051
Alignment:
Q  255 attttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacatt 319  Q
    ||||| ||||||||||| |||||||| |||| |||||||||||||||| ||||||||||||||||    
T  3464115 atttttgtacctaaaaatgtaaactcggtaatctcggagagttaacacacgatttgcggaacatt 3464051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 35404343 - 35404419
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||| || | ||||||||| |||| |||||||||| | |||||||||||||| |||||||||||||||||||||    
T  35404343 gtcaaactttccaattttaccaaaaaccgagtttacctctaagttaacacgatttcggtacctaaaaacgtaaactc 35404419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 265
Target Start/End: Original strand, 18727595 - 18727732
Alignment:
Q  137 ttatatttttagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttttaactcg---------gtcaaacctttcgattttaccaga 227  Q
    |||| ||||||||| ||||||||||||| |||||| | ||||||||| |||||||| | ||||||||         ||||||| ||| ||||||||||||    
T  18727595 ttatttttttagatataaactcgtaaaactcggtcgagtttacacgagtttatcgaatgttaactcggtgaaactcgtcaaactttttgattttaccaga 18727694  T
Q  228 aactgagtttacctatgagttaacacgattttggtacc 265  Q
    |   ||||||||||  ||||||||||| ||||||||||    
T  18727695 attcgagtttacctccgagttaacacggttttggtacc 18727732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 204 - 280
Target Start/End: Complemental strand, 3991850 - 3991774
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||| ||||||||| |||| |||| ||||||||||  ||||||||||| |||||  ||||||||||||||||||    
T  3991850 gtcaaacttttcgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactc 3991774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 196 - 280
Target Start/End: Complemental strand, 12877771 - 12877687
Alignment:
Q  196 ttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||||||||||| || |||||| | || |||| ||||||||||  ||||||||||| |||||  ||||||||||||||||||    
T  12877771 ttaactcggtcaaactttccgatttcatcaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactc 12877687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 204 - 280
Target Start/End: Complemental strand, 15926455 - 15926379
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||| || |||||||||||||||  ||||| ||||  ||||| |||||||||||||||| ||||||||||||||    
T  15926455 gtcaaacattgcgattttaccagaaatcgagttaacctccgagttgacacgattttggtaccaaaaaacgtaaactc 15926379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 277
Target Start/End: Original strand, 11153384 - 11153447
Alignment:
Q  214 tcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaa 277  Q
    ||||||||||||||||| ||||||||||  |||||||||||||||  | |||||||||||||||    
T  11153384 tcgattttaccagaaaccgagtttacctccgagttaacacgatttcagcacctaaaaacgtaaa 11153447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 280
Target Start/End: Complemental strand, 19948615 - 19948539
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||| || |||||| |||| |||||||||||||||  ||||||||||| |||||  ||||||||| ||||||||    
T  19948615 gtcaaactttccgatttcaccaaaaactgagtttacctccgagttaacacgtttttgccacctaaaaatgtaaactc 19948539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 280
Target Start/End: Complemental strand, 33262930 - 33262854
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||| || |||||| |||| |||| ||||||||||  ||||| ||||| |||||  ||||||||||||||||||    
T  33262930 gtcaaactttccgatttcaccaaaaaccgagtttaccttcgagtttacacgtttttgccacctaaaaacgtaaactc 33262854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 38413478 - 38413554
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||| || |||||| |||| |||| ||||||||||  ||||| ||||| |||||  ||||||||||||||||||    
T  38413478 gtcaaactttccgatttcaccaaaaaccgagtttacctccgagtttacacgtttttgccacctaaaaacgtaaactc 38413554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 13898553 - 13898475
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcag 282  Q
    ||||||| || |||||| |||| |||  ||||||||||  ||||||||||| |||||   |||||||||||||||||||    
T  13898553 gtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccgcctaaaaacgtaaactcag 13898475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 14039170 - 14039092
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcag 282  Q
    ||||||| || |||||| |||| |||  ||||||||||  ||||||||||| |||||   |||||||||||||||||||    
T  14039170 gtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccgcctaaaaacgtaaactcag 14039092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 32242242 - 32242308
Alignment:
Q  216 gattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcag 282  Q
    |||||||| |||||   |||||||||  |||||||||||||||||||| || |||| ||||||||||    
T  32242242 gattttacaagaaatcaagtttacctcagagttaacacgattttggtatctcaaaatgtaaactcag 32242308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 32293989 - 32293912
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcag 282  Q
    ||||||| || ||||||||| |||||   ||||||| |  || ||||||||||||||||||| ||||||||||||||||    
T  32293989 gtcaaacattccgattttacaagaaatccagtttacatcagatttaacacgattttggtacc-aaaaacgtaaactcag 32293912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 309
Target Start/End: Original strand, 3858446 - 3858551
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| || ||||||||||| |||  ||||||||||   |||| |||| ||||||  || |||||||||||| || || | ||||| |||||||||||    
T  3858446 gtcaaacattccgattttaccaaaaatcgagtttaccttcaagttgacacaattttgacacttaaaaacgtaaattcggttaactcggcgagttaacact 3858545  T
Q  304 cgattt 309  Q
    | ||||    
T  3858546 caattt 3858551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 319
Target Start/End: Original strand, 43305035 - 43305111
Alignment:
Q  244 gagttaacacgattttggtaccta-aaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacatt 319  Q
    |||||||||| | |||| |||||| |||||| |||||| |||| ||||  || ||||||||||||||| ||||||||    
T  43305035 gagttaacactagtttgatacctataaaacgaaaactcggtaaactcgacgaattaacactcgatttgtggaacatt 43305111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 292 - 320
Target Start/End: Complemental strand, 43825327 - 43825299
Alignment:
Q  292 agagttaacactcgatttgcggaacattg 320  Q
    |||||||||||||||||||||||||||||    
T  43825327 agagttaacactcgatttgcggaacattg 43825299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 204 - 322
Target Start/End: Complemental strand, 16438783 - 16438665
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    |||||||||| ||||||||||||||   ||||||||||   ||||||||||||||| ||||||||||||||||||||  ||| |||||||||||||||||    
T  16438783 gtcaaaccttccgattttaccagaagtcgagtttacctccaagttaacacgatttttgtacctaaaaacgtaaactcgataaactcggagagttaacact 16438684  T
Q  304 cgatttgcggaacattgct 322  Q
    |||||||||||||||||||    
T  16438683 cgatttgcggaacattgct 16438665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 142 - 320
Target Start/End: Complemental strand, 2607043 - 2606856
Alignment:
Q  142 tttttagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttttaactcggtcaaac---------ctttcgattttaccagaaactg 232  Q
    ||||||||||||||||||||||| |||||| | |||| | || ||||| |||| |||||||||||||||         |||  ||||||||||||||  |    
T  2607043 tttttagatgtaaactcgtaaaactcggtcgagtttataagagtttattgagtgttaactcggtcaaactcatcaaaccttctgattttaccagaaatcg 2606944  T
Q  233 agtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattg 320  Q
    |||||||||  ||||||| ||||||||||| |||||| ||||||||||||||| |||  |||||||||| ||||||||||||||||||    
T  2606943 agtttacctcagagttaaaacgattttggtgcctaaacacgtaaactcagtaaactcaaagagttaacattcgatttgcggaacattg 2606856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 7497620 - 7497507
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| ||||||||||  |||||||||||||||| |||||||||||||||||||   ||| ||||||||||||||| ||||    
T  7497620 aaaccttccaattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacattcga 7497521  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  7497520 tttgcggaacattg 7497507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 30384743 - 30384856
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||| |||||||||| |||||||  |||||||||||||||| |||||||||||| ||||||| |||| ||||||||||||||||||||    
T  30384743 aaaccttccaattttatcagaaactgattttaccttagagttaacacgatttttgtacctaaaaacataaactcggtaatctcggagagttaacactcga 30384842  T
Q  307 tttgcggaacattg 320  Q
    |||||||| |||||    
T  30384843 tttgcggatcattg 30384856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 31975675 - 31975791
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    |||||||||| ||||||||| |||||  ||||||||||  |||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||    
T  31975675 gtcaaaccttccgattttacaagaaatcgagtttacctcagagttaacacgattttggtacctaaacacataaactcagtaaactcggagagttaacact 31975774  T
Q  304 cgatttgcggaacattg 320  Q
     ||||||| || |||||    
T  31975775 tgatttgccgagcattg 31975791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 31067954 - 31067841
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| |||||||| |||||||||||    
T  31067954 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 31067855  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  31067854 tttgcggaacattg 31067841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 14262115 - 14262228
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||  || |||||||  |||||||||||||||| ||||||||||| |||||||   ||| ||||||||||||||||||||    
T  14262115 aaaccttccaattttaccagaaatcgattttacctcagagttaacacgatttttgtacctaaaaaagtaaactagataatctcggagagttaacactcga 14262214  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  14262215 tttgcggaacattg 14262228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 34758758 - 34758871
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||| ||||||| || |||||||  |||||||||||||||| |||||||||||||||||||   ||| |||||||||||||| |||||    
T  34758758 aaaccttccaattttatcagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcga 34758857  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  34758858 tttgcggaacattg 34758871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 4200130 - 4200243
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  ||||||||| |||||| |||| |||||| ||||||||  ||| |||||||| |||||||||||    
T  4200130 aaaccttccaattttaccagaaaccgattttacctcagagttaacatgatttttgtacttaaaaatgtaaactcgataatctcggagatttaacactcga 4200229  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  4200230 tttgcggaacattg 4200243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 31896159 - 31896046
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||| ||||  ||| |||||||| |||||||||||    
T  31896159 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtatactcgataatctcggagatttaacactcga 31896060  T
Q  307 tttgcggaacattg 320  Q
    ||| ||||||||||    
T  31896059 tttacggaacattg 31896046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 185 - 317
Target Start/End: Original strand, 28900842 - 28900965
Alignment:
Q  185 tttatcgagttttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagta 284  Q
    |||| ||||| ||||||||| |||||||| |||||||||||||||  ||||||||||  |||||||||||||||||||||||||| | |||||           
T  28900842 tttaccgagtgttaactcggccaaaccttccgattttaccagaaatcgagtttacctcagagttaacacgattttggtacctaaacatgtaaa------- 28900934  T
Q  285 agctcggagagttaacactcgatttgcggaaca 317  Q
      ||||||||||||||||||||||| |||||||    
T  28900935 --ctcggagagttaacactcgatttacggaaca 28900965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 215 - 319
Target Start/End: Complemental strand, 3000306 - 3000202
Alignment:
Q  215 cgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcgga 314  Q
    ||||||||||| |||  || ||||||   |||||||||||||||||||||||||| ||||||| ||||||| ||||| ||||||||||| |||||| |||    
T  3000306 cgattttaccataaatcgaatttacccccgagttaacacgattttggtacctaaacacgtaaaatcagtaaactcggcgagttaacacttgatttgtgga 3000207  T
Q  315 acatt 319  Q
    |||||    
T  3000206 acatt 3000202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 1463694 - 1463810
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| || |||||||||||||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| ||||     
T  1463694 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacg 1463793  T
Q  304 cgatttgcggaacattg 320  Q
    ||||||| |||||||||    
T  1463794 cgatttgtggaacattg 1463810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 6788177 - 6788061
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| || |||||||||||||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| ||||     
T  6788177 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacg 6788078  T
Q  304 cgatttgcggaacattg 320  Q
    ||||||| |||||||||    
T  6788077 cgatttgtggaacattg 6788061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 322
Target Start/End: Original strand, 10113803 - 10113921
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| || ||||||||||| |||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| ||||     
T  10113803 gtcaaactttccgattttaccaaaaaacgagtttacctccgagttaacacgtttttaggacctaaacacgtaaactcggtaaactcgccgagttgacacg 10113902  T
Q  304 cgatttgcggaacattgct 322  Q
    ||||||| |||||||||||    
T  10113903 cgatttgtggaacattgct 10113921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 179 - 269
Target Start/End: Original strand, 33641286 - 33641376
Alignment:
Q  179 cacgaatttatcgagttttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaa 269  Q
    ||||| |||||||||| ||||||||||||||||||  ||||||||||  || ||||||||| |  ||||||||||||||||| ||||||||    
T  33641286 cacgagtttatcgagtgttaactcggtcaaaccttatgattttaccattaattgagtttacatcagagttaacacgattttgatacctaaa 33641376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 31535083 - 31535159
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||||||||||||||||||||||  |||||| |||  |||||||||| |||||| |||||||||| ||||||||    
T  31535083 gtcaaacctttcgattttaccagaaatcgagtttgcctcagagttaacacaattttgatacctaaaaatgtaaactc 31535159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 196 - 280
Target Start/End: Original strand, 7835379 - 7835463
Alignment:
Q  196 ttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||||||||||| || |||||| |||| |||| ||||||||||  || |||||||| |||||  ||||||||||||||||||    
T  7835379 ttaactcggtcaaactttccgatttcaccaaaaaccgagtttacctccgacttaacacgtttttgccacctaaaaacgtaaactc 7835463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 216 - 282
Target Start/End: Complemental strand, 13461438 - 13461372
Alignment:
Q  216 gattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcag 282  Q
    |||||||||| |||| ||||||||||  ||||| ||||||||||| ||| |||||||||||||||||    
T  13461438 gattttaccaaaaaccgagtttacctccgagttgacacgattttgatacataaaaacgtaaactcag 13461372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 320
Target Start/End: Complemental strand, 34773872 - 34773807
Alignment:
Q  254 gattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattg 320  Q
    |||||| ||||||||||  ||||||||| ||| |||||||| |||||||||||||||||||||||||    
T  34773872 gatttttgtacctaaaat-gtaaactcaataatctcggagatttaacactcgatttgcggaacattg 34773807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 8779604 - 8779680
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||| || |||||| |||| |||| ||||||||||  ||||||||||| |||||  ||||||||||||||||||    
T  8779604 gtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactc 8779680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 31996271 - 31996347
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||| || |||||| |||| |||  ||||||||||  ||||||||||| |||||  ||||||||||||||||||    
T  31996271 gtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactc 31996347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 279
Target Start/End: Complemental strand, 21199631 - 21199556
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaact 279  Q
    ||||||| || |||||| |||| |||  ||||||||||  ||||||||||| |||||  |||||||||||||||||    
T  21199631 gtcaaactttccgatttcaccaaaaatcgagtttaccttggagttaacacggttttgccacctaaaaacgtaaact 21199556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 210 - 320
Target Start/End: Original strand, 1460828 - 1460938
Alignment:
Q  210 cctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgattt 309  Q
    |||| |||||||||||||||| |||||||||| ||||||||||| ||||| |||||||||||||||||||| |||| |||  ||||||||||||||||||    
T  1460828 ccttccgattttaccagaaaccgagtttacctctgagttaacacaatttttgtacctaaaaacgtaaactcggtaatctcaaagagttaacactcgattt 1460927  T
Q  310 gcggaacattg 320  Q
    |||||||||||    
T  1460928 gcggaacattg 1460938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 4240145 - 4240258
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| |||||||||||||||| ||||||||||  |||||||||||||||| | |||||||||||||||||| |||| ||| |||||||||||||| |    
T  4240145 aaaccttccgattttaccagaaacggagtttacctcagagttaacacgatttttgcacctaaaaacgtaaactcggtaatctcagagagttaacactcaa 4240244  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  4240245 tttgcggaacattg 4240258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 4549937 - 4550050
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||| |||||||||| |||| ||||||||||||||||||||    
T  4549937 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaacacgtaaactcggtaatctcggagagttaacactcga 4550036  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  4550037 tttgcggaacattg 4550050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 13926454 - 13926341
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||||||||||||  ||| ||||||||||||||||||||    
T  13926454 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgataatctcggagagttaacactcga 13926355  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  13926354 tttgcggaacattg 13926341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 37014377 - 37014264
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||||| |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||    
T  37014377 aaacctttcaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcga 37014278  T
Q  307 tttgcggaacattg 320  Q
    |||||| |||||||    
T  37014277 tttgcgaaacattg 37014264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 166 - 320
Target Start/End: Complemental strand, 34218584 - 34218430
Alignment:
Q  166 tcggtcaattttacacgaatttatcgagttttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacc 265  Q
    |||||| | ||||||||||||||  |||| ||||||||||||||||||  ||||||| ||||||| || |||||||  || ||||||||||||||||| |    
T  34218584 tcggtcgagtttacacgaatttactgagtattaactcggtcaaaccttctgattttagcagaaaccgaatttaccttcgaattaacacgattttggtatc 34218485  T
Q  266 taaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattg 320  Q
    ||||||||||||||  |||| ||| ||| |||||||||| |||||||||| ||||    
T  34218484 taaaaacgtaaacttggtaaactcagagtgttaacactcaatttgcggaatattg 34218430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 204 - 323
Target Start/End: Original strand, 16548869 - 16548988
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| |||||||||||||||||| |||||||||||  ||||| |||||||||||||||||||||||||||||||  ||| |||   |||||||||||    
T  16548869 gtcaaacatttcgattttaccagaaattgagtttacctccgagttgacacgattttggtacctaaaaacgtaaactcgataaactcaatgagttaacact 16548968  T
Q  304 cgatttgcggaacattgctt 323  Q
    ||||||  ||||||||||||    
T  16548969 cgatttatggaacattgctt 16548988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 5949634 - 5949522
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||| ||||||    
T  5949634 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactga-taatctcggagagttaatactcga 5949536  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  5949535 tttgcggaacattg 5949522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 207 - 319
Target Start/End: Original strand, 40013384 - 40013496
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||||||  ||||||||||||||||  ||| |||||| |||||||| |||| ||||||||||||||||||||    
T  40013384 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttatacttaaaaatgtaaactcggtaatctcggagagttaacactcga 40013483  T
Q  307 tttgcggaacatt 319  Q
    |||||||||||||    
T  40013484 tttgcggaacatt 40013496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 204 - 309
Target Start/End: Original strand, 29716815 - 29716920
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||||||  ||||||||||||||   |||||||||  ||||||||||||||||| ||||||||||||||||||| |||| || ||||||||||||||    
T  29716815 gtcaaaccttctgattttaccagaaatcaagtttaccttcgagttaacacgattttgatacctaaaaacgtaaactccgtaaacttggagagttaacact 29716914  T
Q  304 cgattt 309  Q
    ||||||    
T  29716915 cgattt 29716920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 39852893 - 39852780
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | ||||||||| |||  || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| ||||||||||||||||||||    
T  39852893 aaaccttccaattttaccaaaaatcgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagagttaacactcga 39852794  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  39852793 tttgcggaacattg 39852780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 5651211 - 5651327
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| |||| |||| ||||||||  ||||||||||  |||||||||||||||||||||||||| ||||||| ||  ||| |||| || |||||||||    
T  5651211 gtcaaacttttcaatttcaccagaaatcgagtttacctccgagttaacacgattttggtacctaaacacgtaaaatcgataaactcgaagtgttaacact 5651310  T
Q  304 cgatttgcggaacattg 320  Q
    |||||||||||||||||    
T  5651311 cgatttgcggaacattg 5651327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 15672703 - 15672819
Alignment:
Q  202 cggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaaca 301  Q
    ||||||||| || ||||||||||| |||   |||||| || |||||| |||||||||| |||||||||||| |||||||||||| ||||| |||||||||    
T  15672703 cggtcaaacattccgattttaccataaatcaagtttatctttgagttgacacgattttagtacctaaaaacataaactcagtaaactcggcgagttaaca 15672802  T
Q  302 ctcgatttgcggaacat 318  Q
    || |||||| |||||||    
T  15672803 cttgatttgtggaacat 15672819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 13999773 - 13999886
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | |||||||||||||| || |||| ||   ||||||||||||||| ||||||||||| || |||||  ||| |||||||| |||||||||||    
T  13999773 aaaccttccaattttaccagaaaccgattttatctcaaagttaacacgatttttgtacctaaaaatgtcaactccataatctcggagatttaacactcga 13999872  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  13999873 tttgcggaacattg 13999886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 7125189 - 7125305
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| || |||||||||||||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| ||||     
T  7125189 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacg 7125288  T
Q  304 cgatttgcggaacattg 320  Q
    ||||||| |||||||||    
T  7125289 cgatttgtggaacattg 7125305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 204 - 324
Target Start/End: Original strand, 37798144 - 37798263
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| |||||||||||||||||| ||||||||||| |||||||||||| ||||   |  |||| |||||||||| |||| ||||  ||||| ||||     
T  37798144 gtcaaacttttcgattttaccagaaattgagtttacctttgagttaacacgtttttaacagataaacacgtaaactcggtaaactcgccgagttgacac- 37798242  T
Q  304 cgatttgcggaacattgcttt 324  Q
    ||||||| |||||||||||||    
T  37798243 cgatttgtggaacattgcttt 37798263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 319
Target Start/End: Complemental strand, 21489965 - 21489862
Alignment:
Q  216 gattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaa 315  Q
    ||||||||||||||   |||||| ||  || || |||||||||||||||||||||| ||||| ||| ||| || | | ||||||||||||||||| ||||    
T  21489965 gattttaccagaaatcaagtttatcttcgaattgacacgattttggtacctaaaaatgtaaaatcaataaacttgaaaagttaacactcgatttgtggaa 21489866  T
Q  316 catt 319  Q
    ||||    
T  21489865 catt 21489862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 280
Target Start/End: Complemental strand, 25868881 - 25868800
Alignment:
Q  199 actcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    |||||||||||| || |||||| |||| |||| ||||||||||  ||||||||||| |||||  |||||||||| |||||||    
T  25868881 actcggtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacataaactc 25868800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 2675098 - 2675174
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||| ||||||||| |||| |||  ||||||||||  ||||||||||| |||||  ||||||||||||||||||    
T  2675098 gtcaaacttttcgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactc 2675174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 28623191 - 28623307
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 303  Q
    ||||||| || | |||||||||||||  ||||||| ||  ||||||||||| |||| | ||||||| ||||||||||  ||| ||||  ||||| ||||     
T  28623191 gtcaaactttgcaattttaccagaaatcgagtttatctccgagttaacacgtttttagcacctaaacacgtaaactcgataaactcgctgagttgacacg 28623290  T
Q  304 cgatttgcggaacattg 320  Q
    ||||||| |||||||||    
T  28623291 cgatttgtggaacattg 28623307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 204 - 277
Target Start/End: Original strand, 21238783 - 21238856
Alignment:
Q  204 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaa 277  Q
    ||||||| || ||||||||||| |||| ||||||||||  ||||||||||| |||||  | |||||||||||||    
T  21238783 gtcaaactttccgattttaccaaaaaccgagtttacctccgagttaacacgtttttgccatctaaaaacgtaaa 21238856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 29758743 - 29758707
Alignment:
Q  244 gagttaacacgattttggtacctaaaaacgtaaactc 280  Q
    ||||||||||||||||| |||||||||||||||||||    
T  29758743 gagttaacacgattttgatacctaaaaacgtaaactc 29758707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 1389 - 1276
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | ||||||| |||||| || |||||||  |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  1389 aaaccttccaattttacaagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcga 1290  T
Q  307 tttgcggaacattg 320  Q
    |||| |||||||||    
T  1289 tttgtggaacattg 1276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 11047 - 10934
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 306  Q
    ||||||| | ||||||||| |||  || |||||||  |||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||    
T  11047 aaaccttccaattttaccaaaaatcgaatttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcga 10948  T
Q  307 tttgcggaacattg 320  Q
    ||||||||||||||    
T  10947 tttgcggaacattg 10934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 137 - 320
Target Start/End: Complemental strand, 89424 - 89241
Alignment:
Q  137 ttatatttttagatgtaaactcgtaaaattcggtcaattttacacgaat-ttatcgagttttaactcggtcaaacctttcgattttaccagaaactgagt 235  Q
    |||| ||||||||||||||||||||||| |||||  | ||||||||| | ||| |  | |  |||||| ||||||||| | |||||||||||||  ||||    
T  89424 ttatgtttttagatgtaaactcgtaaaactcggtggagtttacacgagtgttaactcgatcaaactcg-tcaaaccttccaattttaccagaaatcgagt 89326  T
Q  236 ttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattg 320  Q
    ||||||   |||||||||||| ||||||||||||||| |||||||  ||| |||  |||||||||||||||||| ||||||||||    
T  89325 ttaccttcaagttaacacgatattggtacctaaaaacttaaactcgataaactcacagagttaacactcgatttacggaacattg 89241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 185 - 317
Target Start/End: Complemental strand, 8952 - 8829
Alignment:
Q  185 tttatcgagttttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagta 284  Q
    |||| ||||| ||||||||| |||||||| |||||||||||||||  ||||||||||  |||||||||||||||||||||||||| | |||||           
T  8952 tttaccgagtgttaactcggccaaaccttccgattttaccagaaatcgagtttacctcagagttaacacgattttggtacctaaacatgtaaa------- 8860  T
Q  285 agctcggagagttaacactcgatttgcggaaca 317  Q
      ||||||||||||||||||||||| |||||||    
T  8859 --ctcggagagttaacactcgatttacggaaca 8829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 16708 - 16754
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacac 253  Q
    |||||||||||||||||||||||| ||||||||||  ||||||||||    
T  16708 aaacctttcgattttaccagaaaccgagtttacctcagagttaacac 16754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 20944 - 20990
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacac 253  Q
    |||||||||||||||||||||||| ||||||||||  ||||||||||    
T  20944 aaacctttcgattttaccagaaaccgagtttacctcagagttaacac 20990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 28857 - 28811
Alignment:
Q  207 aaacctttcgattttaccagaaactgagtttacctatgagttaacac 253  Q
    |||||||||||||||||||||||| ||||||||||  ||||||||||    
T  28857 aaacctttcgattttaccagaaaccgagtttacctcagagttaacac 28811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 25642 - 25702
Alignment:
Q  222 accagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcag 282  Q
    |||| |||| ||||||||||  ||||||||||| |||||  ||||||||||||||||||||    
T  25642 accaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactcag 25702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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