View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11183_low_28 (Length: 310)

Name: NF11183_low_28
Description: NF11183
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11183_low_28
NF11183_low_28
[»] chr5 (9 HSPs)
chr5 (17-310)||(24238381-24238678)
chr5 (233-293)||(43001864-43001924)
chr5 (235-286)||(14873588-14873639)
chr5 (235-293)||(31084387-31084445)
chr5 (236-297)||(39268541-39268602)
chr5 (245-297)||(15382540-15382592)
chr5 (235-298)||(21576687-21576750)
chr5 (235-285)||(17593665-17593715)
chr5 (235-285)||(35017110-35017160)
[»] chr6 (7 HSPs)
chr6 (235-297)||(31384985-31385047)
chr6 (235-293)||(28152157-28152215)
chr6 (235-293)||(8365450-8365508)
chr6 (235-293)||(17327592-17327650)
chr6 (235-293)||(34595193-34595251)
chr6 (235-292)||(8776910-8776967)
chr6 (236-293)||(32978842-32978899)
[»] chr3 (9 HSPs)
chr3 (235-292)||(27505311-27505368)
chr3 (234-297)||(4987221-4987284)
chr3 (235-294)||(28918061-28918120)
chr3 (235-297)||(20503520-20503582)
chr3 (235-293)||(40993277-40993335)
chr3 (235-293)||(55401134-55401192)
chr3 (235-291)||(15999952-16000008)
chr3 (235-298)||(34185054-34185117)
chr3 (235-293)||(41961581-41961639)
[»] chr7 (8 HSPs)
chr7 (235-293)||(5409773-5409831)
chr7 (235-293)||(9778564-9778622)
chr7 (235-292)||(598268-598325)
chr7 (235-292)||(43027406-43027463)
chr7 (233-291)||(22868108-22868166)
chr7 (235-293)||(24339712-24339770)
chr7 (237-287)||(40287306-40287356)
chr7 (235-291)||(29763131-29763187)
[»] chr4 (7 HSPs)
chr4 (235-293)||(23292928-23292986)
chr4 (238-293)||(49431085-49431140)
chr4 (235-292)||(30982809-30982866)
chr4 (235-293)||(3947703-3947761)
chr4 (235-292)||(24613632-24613689)
chr4 (235-292)||(35157927-35157984)
chr4 (235-295)||(19482736-19482796)
[»] chr1 (9 HSPs)
chr1 (235-297)||(40917815-40917877)
chr1 (235-293)||(1486646-1486704)
chr1 (238-292)||(5898211-5898265)
chr1 (235-292)||(9828115-9828172)
chr1 (235-293)||(6427534-6427592)
chr1 (235-293)||(37598890-37598948)
chr1 (235-288)||(17778617-17778670)
chr1 (235-283)||(113362-113410)
chr1 (234-282)||(42359390-42359438)
[»] chr8 (10 HSPs)
chr8 (234-293)||(926729-926788)
chr8 (235-304)||(6065588-6065657)
chr8 (245-293)||(22943301-22943349)
chr8 (235-293)||(22652046-22652104)
chr8 (235-293)||(29447041-29447099)
chr8 (235-293)||(29510235-29510293)
chr8 (244-293)||(126298-126347)
chr8 (235-292)||(8343387-8343444)
chr8 (244-293)||(40332250-40332299)
chr8 (237-293)||(5813651-5813707)
[»] chr2 (8 HSPs)
chr2 (234-293)||(2438660-2438719)
chr2 (235-293)||(26769581-26769639)
chr2 (234-304)||(15657923-15657993)
chr2 (235-293)||(27084328-27084386)
chr2 (235-293)||(37419813-37419871)
chr2 (235-293)||(38117101-38117159)
chr2 (235-292)||(18840955-18841012)
chr2 (235-287)||(37559042-37559094)
[»] scaffold0003 (1 HSPs)
scaffold0003 (235-293)||(241664-241722)
[»] scaffold0652 (1 HSPs)
scaffold0652 (235-293)||(404-462)
[»] scaffold0380 (1 HSPs)
scaffold0380 (235-297)||(8656-8718)
[»] scaffold0136 (1 HSPs)
scaffold0136 (235-293)||(3780-3838)
[»] scaffold0050 (1 HSPs)
scaffold0050 (236-293)||(70337-70394)
[»] scaffold0103 (1 HSPs)
scaffold0103 (235-283)||(51892-51940)


Alignment Details
Target: chr5 (Bit Score: 215; Significance: 1e-118; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 17 - 310
Target Start/End: Original strand, 24238381 - 24238678
Alignment:
Q  17 atcattaagattaaaaaactgcatacccaaaagaaaataaacagtcaaatagtgagnnnnnnnn--tgaacaaacaagattgaaattgcaaacttaaaag 114  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||          |||||||||||||||||||||||||| |||||||    
T  24238381 atcattaagattcaaaaactgcatacccaaaagaaaacaaacagtcaaatagtgagaaaaaaaaaatgaacaaacaagattgaaattgcaaaattaaaag 24238480  T
Q  115 taaaaatacaagtgaagactcatttt-ggtttttcacaattttcatg-tttagttcataacattttcatatcgggaacaaattagttcgtctcatactga 212  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24238481 taaaaatacaagtgaagactcatttttggtttttcacaattttcatgctttagttcataacattttcatatcgggaacaaattagttcgtctcgtactga 24238580  T
Q  213 gtcaaagactaatatatgcccaatgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtccaacattaacacagacac 310  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  24238581 gtcaaagactaatatgtgcccaatgaagcacggacactcctaggattatgcatgtcccagtgttggacacgtgtcgtgtccaacattaacaaagacac 24238678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 233 - 293
Target Start/End: Complemental strand, 43001924 - 43001864
Alignment:
Q  233 caatgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    |||||||||| |||||||||| |||||| || ||||| |||||| ||||||||||||||||    
T  43001924 caatgaagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtcc 43001864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 286
Target Start/End: Complemental strand, 14873639 - 14873588
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgt 286  Q
    |||||||| |||||||||| |||||| || ||||||||||||||||||||||    
T  14873639 atgaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgt 14873588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 31084445 - 31084387
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    ||||| || |||||||||| |||||| ||||||||| |||| |||||||||||||||||    
T  31084445 atgaaccacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtcc 31084387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 297
Target Start/End: Original strand, 39268541 - 39268602
Alignment:
Q  236 tgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtccaaca 297  Q
    ||||||| |||||||||| |||||| || |||||| |||| |||||| ||||||||||||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgtccaaca 39268602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 15382592 - 15382540
Alignment:
Q  245 gacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtccaaca 297  Q
    ||||||||| |||||| || ||||||||||| ||||| |||||||||||||||    
T  15382592 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaaca 15382540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 298
Target Start/End: Original strand, 21576687 - 21576750
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtccaacat 298  Q
    |||||||| |||||||||| |||||| || |||||| ||||  |||||||||||||||| ||||    
T  21576687 atgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacat 21576750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 285
Target Start/End: Original strand, 17593665 - 17593715
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtg 285  Q
    |||||| | |||||||||| |||||| || |||||||||||||||||||||    
T  17593665 atgaagtacggacactcctcggattaagcgtgtcccggtgttggacacgtg 17593715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 285
Target Start/End: Complemental strand, 35017160 - 35017110
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtg 285  Q
    |||||||| |||||||||| |||||| || ||||||| |||||||||||||    
T  35017160 atgaagcacggacactcctcggattaggcgtgtcccgatgttggacacgtg 35017110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 31385047 - 31384985
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtccaaca 297  Q
    |||||||| |||||||||| |||||| || ||||||||||| |||||||||||||||||||||    
T  31385047 atgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaaca 31384985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 28152215 - 28152157
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    |||||||| | |||||||| |||||| || ||||||||||| |||||||||||||||||    
T  28152215 atgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtcc 28152157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 8365450 - 8365508
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    |||||||| ||| |||||| |||||| || |||||| |||| |||||||||||||||||    
T  8365450 atgaagcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtcc 8365508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 17327592 - 17327650
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    |||||||| |||||||||| |||||| || |||||| ||||  ||||||||||||||||    
T  17327592 atgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtcc 17327650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 34595251 - 34595193
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    |||||||| |||||||||| |||||| |  |||||||||||  ||||||||||||||||    
T  34595251 atgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtcc 34595193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 292
Target Start/End: Original strand, 8776910 - 8776967
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtc 292  Q
    |||||||| |||||||||| |||||| |  |||| |||||| ||||||||||||||||    
T  8776910 atgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtc 8776967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 293
Target Start/End: Original strand, 32978842 - 32978899
Alignment:
Q  236 tgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    ||||||| |||||||||| ||||||  | ||||||||||| ||||| |||||||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtcc 32978899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 27505368 - 27505311
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtc 292  Q
    |||||||| |||||||||| |||||| |||||||||||||| ||||||||||||||||    
T  27505368 atgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtc 27505311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 4987221 - 4987284
Alignment:
Q  234 aatgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtccaaca 297  Q
    ||||||| | |||||||||| |||||| || ||||||||||| |||||||||||||||||||||    
T  4987221 aatgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaaca 4987284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 28918120 - 28918061
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcca 294  Q
    |||||||| |||||||||| |||||| || |||||| |||| ||||||||||||||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtcca 28918061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 20503582 - 20503520
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtccaaca 297  Q
    |||||||| |||||||||| |||||| || |||||||||||  |||| |||||||||||||||    
T  20503582 atgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaaca 20503520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 40993277 - 40993335
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    |||||||| |||||||||| |||||| || ||||||||||| ||||| |||||||||||    
T  40993277 atgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtcc 40993335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 55401192 - 55401134
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    |||||||| |||||||||| |||||| || |||| |||||| |||||||||||||||||    
T  55401192 atgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtcc 55401134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 15999952 - 16000008
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgt 291  Q
    |||| ||| |||||||||| |||||| || ||||||||||| |||||||||||||||    
T  15999952 atgatgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgt 16000008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 298
Target Start/End: Original strand, 34185054 - 34185117
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtccaacat 298  Q
    |||||||| |||||||||| |||||| || ||||||||||| |||||| |||| ||||| ||||    
T  34185054 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgacat 34185117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 41961581 - 41961639
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    |||||||| ||||||| || |||||| || |||||| |||| |||||||||||||||||    
T  41961581 atgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtcc 41961639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 5409773 - 5409831
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    |||||||| |||||||||| |||||| || ||||||||||| |||||||||||||||||    
T  5409773 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcc 5409831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 9778622 - 9778564
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    |||||||| |||||||||| |||||| || ||||||||||| |||||||||| ||||||    
T  9778622 atgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtcc 9778564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 598325 - 598268
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtc 292  Q
    |||||||| ||||||| || |||||| || ||||||||||| ||||||||||||||||    
T  598325 atgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 598268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 292
Target Start/End: Original strand, 43027406 - 43027463
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtc 292  Q
    |||||||| |||||||| | |||||| || ||||||||||| ||||||||||||||||    
T  43027406 atgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 43027463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 291
Target Start/End: Complemental strand, 22868166 - 22868108
Alignment:
Q  233 caatgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgt 291  Q
    |||||||||| |||||||||| ||||||||  |||||||||||  ||||||||| ||||    
T  22868166 caatgaagcatggacactcctcggattatgtgtgtcccggtgtctgacacgtgttgtgt 22868108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 24339770 - 24339712
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    |||||||| || ||||||| |||||| || ||||||||||| ||| |||||||||||||    
T  24339770 atgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtcc 24339712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 287
Target Start/End: Original strand, 40287306 - 40287356
Alignment:
Q  237 gaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtc 287  Q
    |||||| |||||||||| |||||| |||||||||||||| ||||| |||||    
T  40287306 gaagcacggacactcctcggattaggcatgtcccggtgtcggacatgtgtc 40287356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 29763131 - 29763187
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgt 291  Q
    |||||||| |||||||||| |||||| || ||||| | ||| |||||||||||||||    
T  29763131 atgaagcacggacactcctcggattaggcgtgtcctgatgtcggacacgtgtcgtgt 29763187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 23292928 - 23292986
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    |||||||| |||||||||| |||||| || ||||||||||| |||||||||||||||||    
T  23292928 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcc 23292986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 293
Target Start/End: Complemental strand, 49431140 - 49431085
Alignment:
Q  238 aagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    ||||| |||||||||| |||| | || |||||||||||||||||||||||||||||    
T  49431140 aagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtcc 49431085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 292
Target Start/End: Original strand, 30982809 - 30982866
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtc 292  Q
    |||||||| |||||||| | |||||| || ||||||||||| ||||||||||||||||    
T  30982809 atgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 30982866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 3947703 - 3947761
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    |||||||| |||||||||| |||||| |  ||||| ||||| |||||||||||||||||    
T  3947703 atgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtcc 3947761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 292
Target Start/End: Original strand, 24613632 - 24613689
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtc 292  Q
    |||||||| |||||||||||||||||  | ||||| |||||  |||||||||||||||    
T  24613632 atgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtc 24613689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 292
Target Start/End: Original strand, 35157927 - 35157984
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtc 292  Q
    |||||||| ||||||| || |||||| || ||| ||||||||||||| ||||||||||    
T  35157927 atgaagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtc 35157984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 295
Target Start/End: Complemental strand, 19482796 - 19482736
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtccaa 295  Q
    |||||||| | |||||||| |||||| |  |||||| |||| |||||||||||||||||||    
T  19482796 atgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaa 19482736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 40917877 - 40917815
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtccaaca 297  Q
    |||||||| ||||| |||| |||||| || ||||||||||| |||||||||||||||||||||    
T  40917877 atgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaaca 40917815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 1486646 - 1486704
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    ||||||||  ||||||||| |||||| || ||||||||||| |||||||||||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcc 1486704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 5898211 - 5898265
Alignment:
Q  238 aagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtc 292  Q
    ||||| |||||||||| ||||||  | ||||||||||||||||||||||||||||    
T  5898211 aagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtc 5898265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 9828172 - 9828115
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtc 292  Q
    |||||||| |||||||||| ||||||  | ||||||||||| ||||||||||||||||    
T  9828172 atgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtc 9828115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 6427592 - 6427534
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    |||||||| |||||||| |  ||||| || ||||||||||| |||||||||||||||||    
T  6427592 atgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtcc 6427534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 37598948 - 37598890
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    |||||||| |||||||||| |||||| || ||||||  ||| |||||||||||||||||    
T  37598948 atgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtcc 37598890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 288
Target Start/End: Complemental strand, 17778670 - 17778617
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcg 288  Q
    |||||||| | ||||| || |||||| |||||||||||||| ||||||||||||    
T  17778670 atgaagcacgaacacttctcggattaggcatgtcccggtgtcggacacgtgtcg 17778617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 283
Target Start/End: Complemental strand, 113410 - 113362
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacg 283  Q
    |||||||| || ||||||| |||||| || |||||||||||||||||||    
T  113410 atgaagcatgggcactcctcggattaggcgtgtcccggtgttggacacg 113362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 42359390 - 42359438
Alignment:
Q  234 aatgaagcaaggacactcctaggattatgcatgtcccggtgttggacac 282  Q
    ||||||||| |||||||||| |||||| || ||||||||||| ||||||    
T  42359390 aatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacac 42359438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 293
Target Start/End: Original strand, 926729 - 926788
Alignment:
Q  234 aatgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    ||||||||| |||||||||| |||| | |||||||||||||| |||||||||||| ||||    
T  926729 aatgaagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtcc 926788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 6065588 - 6065657
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtccaacattaacac 304  Q
    |||||||| |||||||||| | ||||||| ||| ||||||| ||||| ||||||||||| ||||| ||||    
T  6065588 atgaagcacggacactccttgaattatgcgtgttccggtgtcggacatgtgtcgtgtccgacattgacac 6065657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 22943301 - 22943349
Alignment:
Q  245 gacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    ||||||||| |||||| || ||||||||||| |||||||||||||||||    
T  22943301 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcc 22943349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 22652104 - 22652046
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    |||||||| |||||||||| ||||||  | ||||||||||| |||||| ||||||||||    
T  22652104 atgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtcc 22652046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 29447041 - 29447099
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    |||||||| ||||||||||||||||| || ||||| |||||  ||||| ||||||||||    
T  29447041 atgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtcc 29447099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 29510235 - 29510293
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    |||||||| |||||||||| |||||| |  ||||||||||| ||||||| |||||||||    
T  29510235 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtcc 29510293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 126298 - 126347
Alignment:
Q  244 ggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    |||||||||| ||||||  | ||||||||| |||||||||||||||||||    
T  126298 ggacactcctcggattagccgtgtcccggtattggacacgtgtcgtgtcc 126347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 8343444 - 8343387
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtc 292  Q
    ||||||||  ||||||| | |||||| || ||||||||||| ||||||||||||||||    
T  8343444 atgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 8343387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 40332299 - 40332250
Alignment:
Q  244 ggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    |||||||||| |||||| ||  |||||||||| |||||||||||||||||    
T  40332299 ggacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtcc 40332250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 5813707 - 5813651
Alignment:
Q  237 gaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    |||||| ||||||||||   |||| || ||||||||||| |||||||||||||||||    
T  5813707 gaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtcc 5813651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000003; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 293
Target Start/End: Original strand, 2438660 - 2438719
Alignment:
Q  234 aatgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    ||||||||| |||||||||| |||||| || ||||||||||| ||||| |||||||||||    
T  2438660 aatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtcc 2438719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 26769639 - 26769581
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    |||||||| |||||||||| |||||| || |||||| |||| |||||||||||||||||    
T  26769639 atgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtcc 26769581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 304
Target Start/End: Complemental strand, 15657993 - 15657923
Alignment:
Q  234 aatgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtccaacattaacac 304  Q
    ||||||||| |||||||||| ||| || || |||||||| || |||||||||||| |||| |||| |||||    
T  15657993 aatgaagcatggacactcctcggactaggcgtgtcccggcgtcggacacgtgtcgcgtccgacatcaacac 15657923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 27084386 - 27084328
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    ||||||||  |||||||||  ||||| || |||| ||||||||||||||||||||||||    
T  27084386 atgaagcagagacactcctccgattaggcgtgtctcggtgttggacacgtgtcgtgtcc 27084328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 37419871 - 37419813
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    |||||||| |||||||||| |||||| || ||||||||||| |||||||  ||||||||    
T  37419871 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtcc 37419813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 38117101 - 38117159
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    |||||||| |||||| ||| |||||| || ||||||||||| |||||||||| ||||||    
T  38117101 atgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtcc 38117159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 292
Target Start/End: Original strand, 18840955 - 18841012
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtc 292  Q
    |||||||| |||||||||| |||||| |  ||||||||||| ||||| ||||||||||    
T  18840955 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtc 18841012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 37559094 - 37559042
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtc 287  Q
    |||||||| |||||||||| |||||| || ||| ||||||| |||||||||||    
T  37559094 atgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtc 37559042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 241722 - 241664
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    |||||||| ||||||| || |||||| || ||||||||||| |||||||||||||||||    
T  241722 atgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcc 241664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 404 - 462
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    |||||||| |||||||||| |||||| |  ||||||||||| ||||||| |||||||||    
T  404 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtcc 462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 8718 - 8656
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtccaaca 297  Q
    |||||||| |||||||||| |||||| || | |||| |||| ||||||||||||||| |||||    
T  8718 atgaagcacggacactccttggattaggcgtatcccagtgtcggacacgtgtcgtgttcaaca 8656  T

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Target: scaffold0136 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 3780 - 3838
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    ||||||||||||||||||| |||||| || |||| || ||| ||||| |||||||||||    
T  3780 atgaagcaaggacactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtcc 3838  T

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Target: scaffold0050 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 293
Target Start/End: Complemental strand, 70394 - 70337
Alignment:
Q  236 tgaagcaaggacactcctaggattatgcatgtcccggtgttggacacgtgtcgtgtcc 293  Q
    ||||||| | |||||| | |||||| |||||||| ||||| |||||||||||||||||    
T  70394 tgaagcacgaacactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtcc 70337  T

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Target: scaffold0103 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 283
Target Start/End: Complemental strand, 51940 - 51892
Alignment:
Q  235 atgaagcaaggacactcctaggattatgcatgtcccggtgttggacacg 283  Q
    |||||||| ||||| |||| |||||| || |||||||||||||||||||    
T  51940 atgaagcatggacattcctcggattaggcgtgtcccggtgttggacacg 51892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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