View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11183_low_30 (Length: 292)
Name: NF11183_low_30
Description: NF11183
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11183_low_30 |
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Alignment Details
Target: chr1 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 10 - 275
Target Start/End: Original strand, 42661802 - 42662067
Alignment:
| Q |
10 |
tatttactattaagcatatagagaaagtaggcaaccttgaggtagatatcaattgcacggtaaataccatcatccaaggtcctagcacaatcaggaataa |
109 |
Q |
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| T |
42661802 |
tatttactattaagcatatagagaaagtaggcaaccttgaggtagatatcaattgcacggtaaataccatcatccaaggtcctagcacaatcaggaataa |
42661901 |
T |
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| Q |
110 |
cagcagcaagtgactgaaattttggaaatttcaagttgacatcaggtgctacttcagctaagtaactatccatcaaatcagcaacttttgtcattggagt |
209 |
Q |
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| T |
42661902 |
cagcagcaagtgactgaaattttggaaatttcaagttgacatcaggtgctacttcagctaagtaactatccatcaaatcagcaacttttgtcattggagt |
42662001 |
T |
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| Q |
210 |
agcacgttgacaatttgcaccaatgcgtctctcttcctcgacaatatcattattagatgtagaatc |
275 |
Q |
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| T |
42662002 |
agcacgttgacaatttccaacaatgcgtctctcttcctcaacaatatcattattagatgtagaatc |
42662067 |
T |
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