View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11183_low_41 (Length: 249)
Name: NF11183_low_41
Description: NF11183
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11183_low_41 |
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Alignment Details
Target: chr7 (Bit Score: 181; Significance: 7e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 37640657 - 37640890
Alignment:
| Q |
1 |
tttcatgattcaattgcattgtaaattttaatccaaatttattattgtta------------tttttgaatgatttcaggattgttccgatgagaaaagt |
88 |
Q |
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| T |
37640657 |
tttcatgattcaattgcattgtaaattttaatccaaatttattattattaatattattattatttttgaatgatttcaggattgttccgatgagaaaagt |
37640756 |
T |
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| Q |
89 |
tcatccacaagcttatagactttatctggaactcgtgaaacaatatgtgttaatgcttcaatttcgtaacaattctcctaactatgaaatgtgaggttca |
188 |
Q |
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| T |
37640757 |
ttatccacaagcttatagactttatctggaactcgtgaagcaatatgtgttaatgcttcaatttcgtaacaattctcctaactatgaaatgtgaggttca |
37640856 |
T |
|
| Q |
189 |
acttttgttaatatgattatgaaattatcacgtg |
222 |
Q |
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| T |
37640857 |
acttttgttaatatgattatgaaattatcacgtg |
37640890 |
T |
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