View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11191_high_13 (Length: 251)
Name: NF11191_high_13
Description: NF11191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11191_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 24046140 - 24046373
Alignment:
| Q |
1 |
aagaagtagttatgagcttataacattgactagttggttgttgaagcaagaacaaacaggggttattgatgctgaacttactattgttttgaatagtatt |
100 |
Q |
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| T |
24046140 |
aagaagtagttatgagcttataacattgactagttggttgttgaagcaagaacaaacaggggttattgatgctgaacttactattgttttgaatagtatt |
24046239 |
T |
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| Q |
101 |
tcgttggcatgtaaacagattgcttctttggttcaaagagctaatatttctaaccttactggtgttcaaggtgctgtaaatattcaaggggaggatcaga |
200 |
Q |
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| T |
24046240 |
tcgttggcatgtaaacagattgcttctttggttcaaagagctaatatttctaaccttactggtgttcaaggtgctgtaaatattcaaggggaggatcaga |
24046339 |
T |
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| Q |
201 |
aaaaacttgatgttgtctcaaatgaggtatgtat |
234 |
Q |
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| T |
24046340 |
aaaaacttgatgttgtctcaaatgaggtatgtat |
24046373 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 94 - 233
Target Start/End: Original strand, 24068980 - 24069122
Alignment:
| Q |
94 |
tagtatttcgttggcatgtaaacagattgcttctttggttcaaagagctaatatttctaacct---tactggtgttcaaggtgctgtaaatattcaaggg |
190 |
Q |
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| T |
24068980 |
tagtatttccatggcatgtaagcaaattgtttctttgattcaaatagctaatatttctaacctccgtacttgtgttcaaggagttgtaagtattgaaaag |
24069079 |
T |
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| Q |
191 |
gaggatcagaaaaaacttgatgttgtctcaaatgaggtatgta |
233 |
Q |
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| T |
24069080 |
gaagaccagaaaaaacttgatgttgtctcaaatgaggtatgta |
24069122 |
T |
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