View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11192_low_10 (Length: 295)
Name: NF11192_low_10
Description: NF11192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11192_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 17 - 280
Target Start/End: Complemental strand, 27423914 - 27423651
Alignment:
| Q |
17 |
cacagaacaccctattaccaacaaaagctaaggtaaaccctttttccaatacactttgtgtgtaaccccctgacaaaaaatctccataagcattcatcaa |
116 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27423914 |
cacaaaacaccctattaccaacaaaagctaaggtaaaccctttttccaatacactttgtgtgtaaccccctgacaaaaaatctccataagcattcatcaa |
27423815 |
T |
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| Q |
117 |
aaaatttgcatcaattagaaatcctatggccattgagctgcataagaaactaatcaacaaacaaattgatgctgaaccatacttcaaaaggaagattgta |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |
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| T |
27423814 |
aaaatttgcatcaattagaaatcctatggccattgagctgcataagaaactaatcaacaaacaaattgatgctgaagcatatttcaaaaggaagattgtg |
27423715 |
T |
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| Q |
217 |
tctgattttgaaccaaaaaatccactactaaaaagatggcttgcattgaatgcattgttgttta |
280 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27423714 |
tctgattttgaaccaaaaaatccactactaaaaagatggcttgcattgaatgcattgttgttta |
27423651 |
T |
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