View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11192_low_12 (Length: 284)

Name: NF11192_low_12
Description: NF11192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11192_low_12
NF11192_low_12
[»] scaffold0241 (2 HSPs)
scaffold0241 (17-119)||(3069-3171)
scaffold0241 (17-118)||(2451-2552)
[»] chr3 (43 HSPs)
chr3 (8-118)||(49900608-49900718)
chr3 (17-118)||(17518937-17519038)
chr3 (17-118)||(17533799-17533900)
chr3 (17-118)||(40807883-40807984)
chr3 (17-118)||(40812720-40812821)
chr3 (17-118)||(50348090-50348191)
chr3 (17-118)||(17044853-17044954)
chr3 (17-118)||(17538993-17539094)
chr3 (19-118)||(41172435-41172534)
chr3 (17-118)||(17047013-17047114)
chr3 (29-118)||(22306647-22306736)
chr3 (17-118)||(44274305-44274406)
chr3 (17-118)||(10311415-10311515)
chr3 (17-118)||(10563596-10563696)
chr3 (17-118)||(11259318-11259419)
chr3 (17-118)||(17693954-17694055)
chr3 (17-118)||(35354489-35354590)
chr3 (17-118)||(15931571-15931672)
chr3 (17-81)||(35064681-35064745)
chr3 (17-75)||(5200277-5200335)
chr3 (123-180)||(4434096-4434153)
chr3 (123-180)||(4454891-4454948)
chr3 (120-197)||(30068232-30068309)
chr3 (120-180)||(18887794-18887854)
chr3 (33-118)||(14508749-14508835)
chr3 (22-116)||(19568274-19568368)
chr3 (65-118)||(35064605-35064658)
chr3 (120-180)||(18892021-18892081)
chr3 (120-180)||(18902204-18902264)
chr3 (60-116)||(11563654-11563710)
chr3 (22-113)||(9510985-9511076)
chr3 (22-113)||(9518960-9519051)
chr3 (123-197)||(40999552-40999626)
chr3 (123-197)||(41008335-41008409)
chr3 (60-118)||(42324036-42324094)
chr3 (123-197)||(27552461-27552535)
chr3 (62-116)||(33565018-33565072)
chr3 (60-116)||(49968925-49968981)
chr3 (60-118)||(37038978-37039037)
chr3 (70-116)||(13185834-13185880)
chr3 (62-116)||(35960995-35961049)
chr3 (60-116)||(45530668-45530725)
chr3 (60-107)||(22146832-22146880)
[»] scaffold1941 (1 HSPs)
scaffold1941 (17-118)||(25-126)
[»] chr8 (26 HSPs)
chr8 (17-118)||(5082276-5082377)
chr8 (17-118)||(5761421-5761522)
chr8 (8-118)||(20083702-20083812)
chr8 (17-118)||(6573120-6573221)
chr8 (24-116)||(19140659-19140751)
chr8 (17-118)||(42817971-42818072)
chr8 (17-117)||(39936075-39936175)
chr8 (8-118)||(20178593-20178704)
chr8 (17-118)||(6101817-6101918)
chr8 (17-118)||(6202664-6202764)
chr8 (17-118)||(37292593-37292693)
chr8 (120-197)||(17974051-17974128)
chr8 (120-197)||(20725670-20725747)
chr8 (120-197)||(20738568-20738645)
chr8 (120-206)||(20746857-20746943)
chr8 (120-177)||(20733611-20733668)
chr8 (28-93)||(20397590-20397656)
chr8 (14-116)||(31722560-31722661)
chr8 (22-116)||(39694343-39694437)
chr8 (22-113)||(22532201-22532292)
chr8 (22-113)||(22536886-22536977)
chr8 (60-112)||(22317981-22318033)
chr8 (60-116)||(42265575-42265631)
chr8 (60-116)||(45469286-45469342)
chr8 (60-116)||(3273819-3273876)
chr8 (60-93)||(20022122-20022155)
[»] chr7 (35 HSPs)
chr7 (17-118)||(12465324-12465425)
chr7 (17-118)||(20620173-20620274)
chr7 (17-115)||(14180465-14180563)
chr7 (17-119)||(46386151-46386253)
chr7 (17-118)||(13147536-13147637)
chr7 (17-118)||(20214034-20214135)
chr7 (17-118)||(12322994-12323095)
chr7 (17-118)||(12372161-12372262)
chr7 (17-118)||(8851223-8851324)
chr7 (17-118)||(16999320-16999422)
chr7 (17-118)||(11067355-11067456)
chr7 (17-118)||(12127227-12127328)
chr7 (17-118)||(20586239-20586340)
chr7 (17-118)||(32433653-32433754)
chr7 (17-118)||(10277215-10277315)
chr7 (17-92)||(24270037-24270112)
chr7 (120-197)||(12662362-12662439)
chr7 (22-111)||(33002053-33002141)
chr7 (60-116)||(15095703-15095759)
chr7 (60-116)||(15140143-15140199)
chr7 (60-116)||(8135303-8135359)
chr7 (60-116)||(13132387-13132443)
chr7 (58-113)||(47974889-47974944)
chr7 (62-116)||(12557853-12557907)
chr7 (60-118)||(13698703-13698761)
chr7 (61-116)||(15623950-15624005)
chr7 (17-60)||(25942358-25942401)
chr7 (53-96)||(25943041-25943084)
chr7 (70-116)||(35771508-35771554)
chr7 (62-112)||(41284963-41285013)
chr7 (60-116)||(48807392-48807448)
chr7 (70-116)||(4071759-4071805)
chr7 (70-116)||(14218962-14219008)
chr7 (74-116)||(36685211-36685253)
chr7 (60-116)||(11054642-11054699)
[»] chr4 (18 HSPs)
chr4 (17-118)||(25091540-25091641)
chr4 (12-118)||(11425825-11425931)
chr4 (17-118)||(10356500-10356601)
chr4 (17-118)||(53630538-53630639)
chr4 (17-118)||(16998412-16998513)
chr4 (17-118)||(42875684-42875785)
chr4 (17-118)||(15115109-15115210)
chr4 (21-118)||(37019561-37019658)
chr4 (17-118)||(19610211-19610312)
chr4 (17-118)||(6633601-6633701)
chr4 (17-118)||(46001595-46001695)
chr4 (29-95)||(26921708-26921774)
chr4 (62-116)||(9924085-9924139)
chr4 (65-113)||(14549695-14549743)
chr4 (60-114)||(9870513-9870568)
chr4 (27-92)||(27028642-27028708)
chr4 (60-93)||(9638939-9638972)
chr4 (64-116)||(11478720-11478772)
[»] chr2 (23 HSPs)
chr2 (17-118)||(24516073-24516174)
chr2 (17-118)||(17307373-17307474)
chr2 (17-118)||(27484541-27484642)
chr2 (17-118)||(9975816-9975917)
chr2 (17-118)||(24436535-24436636)
chr2 (14-118)||(5031193-5031297)
chr2 (17-113)||(24780909-24781005)
chr2 (17-118)||(19201264-19201365)
chr2 (17-118)||(40912207-40912308)
chr2 (17-118)||(36841151-36841252)
chr2 (30-118)||(22251512-22251600)
chr2 (17-118)||(2523811-2523912)
chr2 (17-118)||(37270587-37270687)
chr2 (60-116)||(25142133-25142189)
chr2 (58-113)||(1383612-1383667)
chr2 (60-116)||(3539766-3539822)
chr2 (58-113)||(357809-357864)
chr2 (59-113)||(24884399-24884453)
chr2 (60-116)||(19358820-19358877)
chr2 (60-116)||(18388256-18388312)
chr2 (68-116)||(27852605-27852653)
chr2 (65-116)||(22259974-22260024)
chr2 (70-114)||(18390282-18390326)
[»] scaffold1766 (1 HSPs)
scaffold1766 (17-118)||(760-861)
[»] scaffold0407 (1 HSPs)
scaffold0407 (17-118)||(11338-11439)
[»] chr6 (21 HSPs)
chr6 (17-118)||(7827859-7827960)
chr6 (17-118)||(19655295-19655396)
chr6 (17-118)||(15890776-15890877)
chr6 (17-118)||(23150351-23150452)
chr6 (17-118)||(27125541-27125642)
chr6 (32-118)||(27330045-27330131)
chr6 (32-118)||(27390785-27390871)
chr6 (17-118)||(18703451-18703556)
chr6 (17-118)||(18709386-18709491)
chr6 (120-197)||(13826181-13826258)
chr6 (21-93)||(19167926-19167998)
chr6 (123-202)||(14474073-14474152)
chr6 (21-96)||(19235015-19235089)
chr6 (21-96)||(30673480-30673556)
chr6 (22-95)||(28948466-28948539)
chr6 (58-113)||(18585733-18585788)
chr6 (64-116)||(18928614-18928666)
chr6 (64-116)||(19401028-19401080)
chr6 (27-92)||(18259262-18259328)
chr6 (60-116)||(23501601-23501658)
chr6 (82-118)||(24267801-24267837)
[»] chr1 (17 HSPs)
chr1 (17-118)||(19676598-19676699)
chr1 (17-118)||(21046113-21046214)
chr1 (17-118)||(42912936-42913037)
chr1 (17-118)||(16058378-16058478)
chr1 (17-118)||(20633695-20633799)
chr1 (120-205)||(45497278-45497363)
chr1 (22-113)||(51324396-51324487)
chr1 (58-113)||(44822090-44822145)
chr1 (60-116)||(7320660-7320716)
chr1 (60-116)||(22350646-22350702)
chr1 (21-96)||(21168825-21168899)
chr1 (78-116)||(13302849-13302887)
chr1 (58-113)||(24723420-24723475)
chr1 (58-95)||(7052009-7052046)
chr1 (60-93)||(8276079-8276112)
chr1 (60-93)||(38056762-38056795)
chr1 (33-93)||(4595935-4595995)
[»] scaffold1283 (1 HSPs)
scaffold1283 (17-118)||(532-633)
[»] scaffold0737 (1 HSPs)
scaffold0737 (17-118)||(4778-4879)
[»] scaffold0632 (1 HSPs)
scaffold0632 (17-118)||(1052-1153)
[»] scaffold0334 (1 HSPs)
scaffold0334 (17-118)||(405-506)
[»] scaffold0207 (1 HSPs)
scaffold0207 (17-118)||(13456-13557)
[»] scaffold0111 (2 HSPs)
scaffold0111 (17-118)||(5270-5371)
scaffold0111 (22-118)||(12597-12693)
[»] scaffold0064 (1 HSPs)
scaffold0064 (17-118)||(58633-58734)
[»] scaffold0026 (1 HSPs)
scaffold0026 (17-118)||(146610-146711)
[»] scaffold0020 (2 HSPs)
scaffold0020 (17-118)||(169063-169164)
scaffold0020 (17-118)||(143498-143599)
[»] scaffold1633 (1 HSPs)
scaffold1633 (17-118)||(1092-1193)
[»] scaffold0077 (1 HSPs)
scaffold0077 (17-118)||(34226-34327)
[»] scaffold0001 (3 HSPs)
scaffold0001 (17-118)||(77574-77675)
scaffold0001 (17-118)||(31881-31982)
scaffold0001 (17-118)||(37188-37289)
[»] scaffold0080 (1 HSPs)
scaffold0080 (17-118)||(21857-21958)
[»] chr5 (14 HSPs)
chr5 (17-118)||(21300108-21300209)
chr5 (17-118)||(19921525-19921626)
chr5 (31-118)||(7484903-7484990)
chr5 (120-197)||(22961437-22961514)
chr5 (21-91)||(20566445-20566515)
chr5 (33-95)||(31622028-31622090)
chr5 (58-113)||(31456888-31456943)
chr5 (58-113)||(36508702-36508757)
chr5 (59-113)||(17876132-17876186)
chr5 (60-116)||(21405694-21405751)
chr5 (29-78)||(22111715-22111764)
chr5 (64-116)||(21617995-21618047)
chr5 (58-97)||(30138059-30138098)
chr5 (62-112)||(31251961-31252011)
[»] scaffold0004 (3 HSPs)
scaffold0004 (17-118)||(328354-328455)
scaffold0004 (27-96)||(72841-72910)
scaffold0004 (29-96)||(75691-75752)
[»] scaffold0019 (2 HSPs)
scaffold0019 (120-232)||(23615-23727)
scaffold0019 (78-118)||(24195-24235)
[»] scaffold0285 (1 HSPs)
scaffold0285 (21-96)||(19652-19727)
[»] scaffold0047 (1 HSPs)
scaffold0047 (21-91)||(78955-79025)
[»] scaffold0002 (1 HSPs)
scaffold0002 (120-197)||(121707-121784)
[»] scaffold0149 (2 HSPs)
scaffold0149 (43-118)||(29637-29711)
scaffold0149 (58-113)||(21539-21594)
[»] scaffold0037 (3 HSPs)
scaffold0037 (22-116)||(113034-113127)
scaffold0037 (64-116)||(81501-81553)
scaffold0037 (22-93)||(117890-117960)
[»] scaffold1904 (1 HSPs)
scaffold1904 (123-180)||(36-93)
[»] scaffold1312 (1 HSPs)
scaffold1312 (123-180)||(2018-2075)
[»] scaffold0174 (3 HSPs)
scaffold0174 (27-96)||(11287-11356)
scaffold0174 (27-96)||(5167-5236)
scaffold0174 (28-96)||(19605-19672)
[»] scaffold0261 (1 HSPs)
scaffold0261 (29-95)||(6620-6686)
[»] scaffold0100 (1 HSPs)
scaffold0100 (31-96)||(26713-26779)
[»] scaffold0036 (1 HSPs)
scaffold0036 (69-118)||(78249-78298)
[»] scaffold0112 (1 HSPs)
scaffold0112 (21-96)||(2787-2863)
[»] scaffold0113 (1 HSPs)
scaffold0113 (56-118)||(35418-35478)
[»] scaffold0848 (1 HSPs)
scaffold0848 (60-118)||(2085-2143)
[»] scaffold0156 (1 HSPs)
scaffold0156 (58-118)||(16532-16592)
[»] scaffold0028 (1 HSPs)
scaffold0028 (60-116)||(3118-3174)
[»] scaffold0230 (1 HSPs)
scaffold0230 (58-113)||(6754-6809)
[»] scaffold0083 (1 HSPs)
scaffold0083 (22-116)||(10821-10913)
[»] scaffold0439 (1 HSPs)
scaffold0439 (59-116)||(12323-12380)
[»] scaffold0175 (2 HSPs)
scaffold0175 (60-116)||(8571-8628)
scaffold0175 (27-92)||(18744-18810)
[»] scaffold0007 (1 HSPs)
scaffold0007 (55-116)||(158888-158949)
[»] scaffold0008 (1 HSPs)
scaffold0008 (61-116)||(135570-135625)
[»] scaffold0040 (1 HSPs)
scaffold0040 (58-107)||(106126-106175)
[»] scaffold0859 (1 HSPs)
scaffold0859 (60-112)||(4612-4664)
[»] scaffold0180 (1 HSPs)
scaffold0180 (60-116)||(28395-28451)
[»] scaffold0379 (1 HSPs)
scaffold0379 (65-96)||(10741-10772)
[»] scaffold0251 (1 HSPs)
scaffold0251 (65-116)||(20152-20202)
[»] scaffold0123 (1 HSPs)
scaffold0123 (60-118)||(7205-7264)
[»] scaffold0116 (1 HSPs)
scaffold0116 (60-115)||(35531-35586)
[»] scaffold0628 (1 HSPs)
scaffold0628 (14-116)||(1125-1226)
[»] scaffold0577 (1 HSPs)
scaffold0577 (74-116)||(9004-9046)
[»] scaffold0328 (1 HSPs)
scaffold0328 (60-93)||(18731-18764)
[»] scaffold0220 (1 HSPs)
scaffold0220 (60-93)||(13878-13911)
[»] scaffold0151 (1 HSPs)
scaffold0151 (67-116)||(31046-31094)
[»] scaffold0056 (1 HSPs)
scaffold0056 (70-115)||(67060-67105)
[»] scaffold0308 (1 HSPs)
scaffold0308 (60-116)||(13370-13426)


Alignment Details
Target: scaffold0241 (Bit Score: 103; Significance: 3e-51; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 3069 - 3171
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3069 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 3168  T
Q  117 ata 119  Q
    |||    
T  3169 ata 3171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 2451 - 2552
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2451 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 2550  T
Q  117 at 118  Q
    ||    
T  2551 at 2552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 3e-51; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 49900608 - 49900718
Alignment:
Q  8 atgagatggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactaca 107  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49900608 atgatatgaacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactaca 49900707  T
Q  108 acctacaacat 118  Q
    |||||||||||    
T  49900708 acctacaacat 49900718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 17519038 - 17518937
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17519038 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 17518939  T
Q  117 at 118  Q
    ||    
T  17518938 at 17518937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 17533900 - 17533799
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17533900 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 17533801  T
Q  117 at 118  Q
    ||    
T  17533800 at 17533799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 40807883 - 40807984
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40807883 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 40807982  T
Q  117 at 118  Q
    ||    
T  40807983 at 40807984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 40812720 - 40812821
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40812720 acatcaattctacacaaattcaacggattttctactctattaacaatcaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 40812819  T
Q  117 at 118  Q
    ||    
T  40812820 at 40812821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 50348191 - 50348090
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50348191 acatcaattctacacaaattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 50348092  T
Q  117 at 118  Q
    ||    
T  50348091 at 50348090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 17044853 - 17044954
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17044853 acatcaattctacacaaattcaacaaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 17044952  T
Q  117 at 118  Q
    ||    
T  17044953 at 17044954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 17538993 - 17539094
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  17538993 acatcaattctacacaaattcaacagattttctactctattaacaaccaattacatcttcaaaacctaatttccaaattcccataactacaacctacaac 17539092  T
Q  117 at 118  Q
    ||    
T  17539093 at 17539094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 41172534 - 41172435
Alignment:
Q  19 atcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 118  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41172534 atcaattctacacaaattcaacaaattttctactctattaacaaccaattacaacttcaaaacctaattccctaattcccataactacaacctacaacat 41172435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 17047013 - 17047114
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||    
T  17047013 acatcaattctacacaaattcaacggattttttactctattaacaaccaattacaacttcaaaacttaattcccaaattcaaataactacaacctacaac 17047112  T
Q  117 at 118  Q
    ||    
T  17047113 at 17047114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 22306736 - 22306647
Alignment:
Q  29 cacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22306736 cacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcacaaattcccataactacaacctacaacat 22306647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 44274305 - 44274406
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  44274305 acatcaattctacacaaattcaatgaattttctactctattaacaaccaattacaacttcaaaatataattcccaaattcccataactacaacctacaac 44274404  T
Q  117 at 118  Q
    ||    
T  44274405 at 44274406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 10311415 - 10311515
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  10311415 acatcacttctac-caaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 10311513  T
Q  117 at 118  Q
    ||    
T  10311514 at 10311515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 10563596 - 10563696
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  10563596 acatcaattctac-caaattcaacggcttttctactctattaacaaccaattacaacttcaaaacctaattcccaaatttccataactacaaactacaac 10563694  T
Q  117 at 118  Q
    ||    
T  10563695 at 10563696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 11259318 - 11259419
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  11259318 acatcacttctacacaaattcaacggattttctactttattaacaatcaattacaacttcaaaacctaattcccaaattctcataactacaatctacaac 11259417  T
Q  117 at 118  Q
    ||    
T  11259418 at 11259419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 17693954 - 17694055
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||| |||||| ||||||||||||||||||||    
T  17693954 acatcaattctacacaaattcaacggattttctactctattaacgatcaattacaacttcaaaatctaattcacaaatttccataactacaacctacaac 17694053  T
Q  117 at 118  Q
    ||    
T  17694054 at 17694055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 35354489 - 35354590
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  35354489 acatcaattctacacaaattcaacggattttctactctaccaacaatcaattacaacttcaaaacctaatttccaaattcccataactacaaccaacaac 35354588  T
Q  117 at 118  Q
    ||    
T  35354589 at 35354590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 15931672 - 15931571
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||  |||||||||||| |||||||||||| |||||| ||||||||||||||| |||    
T  15931672 acatcaattctacacaaattcaacgaattttctactctattaataattaattacaacttcgaaacctaattccaaaattctcataactacaacctaaaac 15931573  T
Q  117 at 118  Q
    ||    
T  15931572 at 15931571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 35064745 - 35064681
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaac 81  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35064745 acatcaattctacacaaattcaacggattttctactatattaacaaccaattacaacttcaaaac 35064681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 5200335 - 5200277
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaactt 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5200335 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaactt 5200277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 4434096 - 4434153
Alignment:
Q  123 ccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaaga 180  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4434096 ccaattcatggtcctttaatctatttccttttaagaatttgtatcagcctttaaaaga 4434153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 4454891 - 4454948
Alignment:
Q  123 ccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaaga 180  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4454891 ccaattcatggtcctttaatctatttccttttaagaatttgtatcagcctttaaaaga 4454948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 30068309 - 30068232
Alignment:
Q  120 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaa 197  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| | ||||||||| ||||    
T  30068309 aagccgattcatggtcctttaatctatttccttttaagaatttgtattagcctttaaaagaaagagaggaaatcagaa 30068232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 18887854 - 18887794
Alignment:
Q  120 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaaga 180  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  18887854 aagccaattcatggtcctttgatctatttccttttaagaatttgtatcagcctttaaaaga 18887794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 14508749 - 14508835
Alignment:
Q  33 aattcaacggattttctactctattaacaaccaattacaacttc-aaaacctaattcccaaattcccataactacaacctacaacat 118  Q
    |||||| | |||| |||||||| |  |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  14508749 aattcatcagattatctactctttctacaaccaattacaacttccaaaacctaattccaaaattcccataactacaacctacaacat 14508835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 19568368 - 19568274
Alignment:
Q  22 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||  |||||||||||| |||||| |   ||| ||||||||||||||| || ||||||||||||||||||| ||||||||||||||||    
T  19568368 aattctacaccgattcaacggattctctactattacaactaccaattacaacttctaaccctaattcccaaattcccaaaactacaacctacaac 19568274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 35064658 - 35064605
Alignment:
Q  65 aattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  35064658 aattacaacttcaaaacctaattcccaaatttccataactacaacctacaacat 35064605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 18892081 - 18892021
Alignment:
Q  120 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaaga 180  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||    
T  18892081 aagccaattcatggtcttttgatctatttccttttaagaatttgtatcagcctttaaaaga 18892021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 18902264 - 18902204
Alignment:
Q  120 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaaga 180  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||    
T  18902264 aagccaattcatggtcttttgatctatttccttttaagaatttgtatcagcctttaaaaga 18902204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 11563654 - 11563710
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||    
T  11563654 caaccaattacaacttttaaacctaattcccaaattcccaaaactacaacctacaac 11563710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 9511076 - 9510985
Alignment:
Q  22 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 113  Q
    ||||||| || || ||||| ||||||||||| |   ||||||||||||||||||| ||||||||||| |||||||||| |||||||| ||||    
T  9511076 aattctaaacgaaatcaacagattttctactattaaaacaaccaattacaacttctaaacctaattctcaaattcccaaaactacaatctac 9510985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 9519051 - 9518960
Alignment:
Q  22 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 113  Q
    ||||||| || || ||||| ||||||||||| |   ||||||||||||||||||| ||||||||||| |||||||||| |||||||| ||||    
T  9519051 aattctaaacgaaatcaacagattttctactattaaaacaaccaattacaacttctaaacctaattctcaaattcccaaaactacaatctac 9518960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 40999552 - 40999626
Alignment:
Q  123 ccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaa 197  Q
    |||||||||||||||||||||||||| ||||||||||||||| | || ||||||||||   ||||||||| ||||    
T  40999552 ccaattcatggtcctttaatctatttccttttaagaatttgttttagtctttaaaagaaggagaggaaatcagaa 40999626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 41008335 - 41008409
Alignment:
Q  123 ccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaa 197  Q
    |||||||||||||||||||||||||| ||||||||||||||| | || ||||||||||   ||||||||| ||||    
T  41008335 ccaattcatggtcctttaatctatttccttttaagaatttgttttagtctttaaaagaaggagaggaaatcagaa 41008409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 42324094 - 42324036
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 118  Q
    ||||||||||||||||| || ||||||| ||||||||||| ||||||||||||||||||    
T  42324094 caaccaattacaacttctaaccctaatttccaaattcccaaaactacaacctacaacat 42324036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 27552535 - 27552461
Alignment:
Q  123 ccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaa 197  Q
    |||||||||||||||||||||||||| ||||||||||||||| | || |||| |||||   ||||||||| ||||    
T  27552535 ccaattcatggtcctttaatctatttccttttaagaatttgttttagtctttgaaagaaggagaggaaatcagaa 27552461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 33565018 - 33565072
Alignment:
Q  62 accaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||| |||||||||| ||||||||||| |||| |||||||||||    
T  33565018 accaattacaacttctaaacctaatttccaaattcccaaaacttcaacctacaac 33565072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 49968981 - 49968925
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||  ||||||||||||||||||| || |||||||| |||||||    
T  49968981 caaccaattacaacttataaacctaattcccaaattctcaaaactacaagctacaac 49968925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 118
Target Start/End: Original strand, 37038978 - 37039037
Alignment:
Q  60 caaccaattacaacttcaaaacctaatt-cccaaattcccataactacaacctacaacat 118  Q
    ||||||||||||||||  || ||||||| |||||||||||| ||||||||||||||||||    
T  37038978 caaccaattacaacttttaaccctaatttcccaaattcccaaaactacaacctacaacat 37039037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 13185834 - 13185880
Alignment:
Q  70 caacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  13185834 caacttctaaacctaattcccaaatttccaaaactacaacctacaac 13185880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 35961049 - 35960995
Alignment:
Q  62 accaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||| |||||||||| ||||||| ||| |||| |||||||||||    
T  35961049 accaattacaacttctaaacctaatttccaaatttccaaaacttcaacctacaac 35960995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 45530725 - 45530668
Alignment:
Q  60 caaccaattacaacttcaaaacctaa-ttcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||| || ||||| ||| |||||||||| |||||||||| |||||    
T  45530725 caaccaattacaacttctaaccctaatttcgcaaattcccaaaactacaacccacaac 45530668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 107
Target Start/End: Complemental strand, 22146880 - 22146832
Alignment:
Q  60 caaccaattacaacttcaaaacctaa-ttcccaaattcccataactaca 107  Q
    ||||||||||||||||| || ||||| |||||||||||||| |||||||    
T  22146880 caaccaattacaacttctaaccctaatttcccaaattcccaaaactaca 22146832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 25 - 126
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 124  T
Q  117 at 118  Q
    ||    
T  125 at 126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 1e-50; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 5082377 - 5082276
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5082377 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 5082278  T
Q  117 at 118  Q
    ||    
T  5082277 at 5082276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 5761421 - 5761522
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5761421 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 5761520  T
Q  117 at 118  Q
    ||    
T  5761521 at 5761522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 20083812 - 20083702
Alignment:
Q  8 atgagatggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactaca 107  Q
    |||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20083812 atgatatgaacatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactaca 20083713  T
Q  108 acctacaacat 118  Q
    |||||||||||    
T  20083712 acctacaacat 20083702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 6573221 - 6573120
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6573221 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctcattcccaaattcccataactacaacctacaac 6573122  T
Q  117 at 118  Q
    ||    
T  6573121 at 6573120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 19140659 - 19140751
Alignment:
Q  24 ttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19140659 ttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 19140751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 42818072 - 42817971
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  42818072 acatcaattctacacaaattcaacggattttctactttattaacaaccaattacaacttcaaaatctaatttccaaattcccataactacaacctacaac 42817973  T
Q  117 at 118  Q
    ||    
T  42817972 at 42817971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 39936175 - 39936075
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39936175 acatcaattgtacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaattcgcaaattcccataactacaacctacaac 39936076  T
Q  117 a 117  Q
    |    
T  39936075 a 39936075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 20178704 - 20178593
Alignment:
Q  8 atgagatggacatcaattctacacaaattcaacggattttctactctattaacaaccaa-ttacaacttcaaaacctaattcccaaattcccataactac 106  Q
    |||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  20178704 atgatatgaacatcaattctacacaaattcaacgaattttctactctattaacaaccaatttacaacttcaaaacctaattcccaaattctcataactac 20178605  T
Q  107 aacctacaacat 118  Q
    ||||||||||||    
T  20178604 aacctacaacat 20178593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 6101918 - 6101817
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  6101918 acatcaatactacacaaattcaatagattttctactctattaacaaccaattataacttcaaaacctgattcccaaattcccataactacaacctacaac 6101819  T
Q  117 at 118  Q
    ||    
T  6101818 at 6101817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 6202664 - 6202764
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  6202664 acatcacttctac-caaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 6202762  T
Q  117 at 118  Q
    ||    
T  6202763 at 6202764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 37292593 - 37292693
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  37292593 acatcacttctac-caaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 37292691  T
Q  117 at 118  Q
    ||    
T  37292692 at 37292693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 17974051 - 17974128
Alignment:
Q  120 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaa 197  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  17974051 aagccaattcatggtcctttaatctatttccttttaagaatttgtatcagcctttaaaagaaaaagaggaaatcagaa 17974128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 20725670 - 20725747
Alignment:
Q  120 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaa 197  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||| ||||    
T  20725670 aagccaattcatggtcctttaatctatttccttttaagaatttgtatcagcctttaaaagaaagagaggaaatcagaa 20725747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 20738568 - 20738645
Alignment:
Q  120 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaa 197  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||| ||||    
T  20738568 aagccaattcatggtcctttaatctatttccttttaagaatttgtatcagcctttaaaagaaagagaggaaatcagaa 20738645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 120 - 206
Target Start/End: Original strand, 20746857 - 20746943
Alignment:
Q  120 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaattgaggacg 206  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| | ||||||||| |||| || |||||    
T  20746857 aagccaattcatggtcctttaatctatttccttttaagaatttgtatcaacctttaaaagaaagagaggaaatcagaactggggacg 20746943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 20733611 - 20733668
Alignment:
Q  120 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaa 177  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20733611 aagccaattcatggtcctttaatctatttccttttaagaatttgtatcagcctttaaa 20733668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 20397656 - 20397590
Alignment:
Q  28 acacaaattcaacggattttctactctattaacaacc-aattacaacttcaaaacctaattcccaaa 93  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  20397656 acacaaattcaatggattttctactctattaacaacctaattacaactttaaaacctaattcccaaa 20397590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 31722661 - 31722560
Alignment:
Q  14 tggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 113  Q
    ||||||| |||||||||  |||||||| ||||| |||||||   | ||||||||||||||||| ||||| |||| ||||||||||| |||||||||||||    
T  31722661 tggacattaattctacatcaattcaacagattt-ctactcttaaatcaaccaattacaacttctaaaccaaatttccaaattcccaaaactacaacctac 31722563  T
Q  114 aac 116  Q
    |||    
T  31722562 aac 31722560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 39694437 - 39694343
Alignment:
Q  22 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||| |||||||| |||| |||||| |    ||||| ||||||||| || || ||||||||||||||||||| ||||||||||||||||    
T  39694437 aattctacaccaattcaacagattctctactattacgacaactaattacaacgtctaaccctaattcccaaattcccaaaactacaacctacaac 39694343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 22532292 - 22532201
Alignment:
Q  22 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 113  Q
    |||||||||| ||||||||  |||||||||| |   ||||| ||||||||||||  ||||||||||||||| || ||| |||||||||||||    
T  22532292 aattctacaccaattcaacaaattttctactattaaaacaatcaattacaacttttaaacctaattcccaattttccaaaactacaacctac 22532201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 22536977 - 22536886
Alignment:
Q  22 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 113  Q
    |||||||||| ||||||||  |||||||||| |   ||||| ||||||||||||  ||||||||||||||| || ||| |||||||||||||    
T  22536977 aattctacaccaattcaacaaattttctactattaaaacaatcaattacaacttttaaacctaattcccaattttccaaaactacaacctac 22536886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 22318033 - 22317981
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaattcccataactacaaccta 112  Q
    ||||||||||||||||| |||||||| ||||||||||||  ||||||||||||    
T  22318033 caaccaattacaacttctaaacctaaatcccaaattcccgaaactacaaccta 22317981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 42265631 - 42265575
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||| || ||||||| || ||||||||||||||||||| ||||||||||||||||    
T  42265631 caaccatttgcaacttctaaccctaattcccaaattcccaaaactacaacctacaac 42265575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 45469342 - 45469286
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||| |||| |||||||||||||  || ||||| ||||||||||    
T  45469342 caaccaattacaacttctaaacataattcccaaatttacaaaactataacctacaac 45469286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 3273819 - 3273876
Alignment:
Q  60 caaccaattacaacttcaaaacctaatt-cccaaattcccataactacaacctacaac 116  Q
    |||||||| |||||||| || ||||||| |||||||||||| |||||||||| |||||    
T  3273819 caaccaatcacaacttctaaccctaatttcccaaattcccaaaactacaacccacaac 3273876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 20022155 - 20022122
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  20022155 caaccaattacaacttctaaacctaattcccaaa 20022122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 1e-50; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 12465425 - 12465324
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12465425 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 12465326  T
Q  117 at 118  Q
    ||    
T  12465325 at 12465324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 20620173 - 20620274
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20620173 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaatttccataactacaacctacaac 20620272  T
Q  117 at 118  Q
    ||    
T  20620273 at 20620274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 17 - 115
Target Start/End: Complemental strand, 14180563 - 14180465
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14180563 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacataattcccaaattcccataactacaacctacaa 14180465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 46386253 - 46386151
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  46386253 acatcaattctacacaaattcaacggaatttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctacaac 46386154  T
Q  117 ata 119  Q
    |||    
T  46386153 ata 46386151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 13147637 - 13147536
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13147637 acatcacttctacacaaattcaacggattttctactttattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 13147538  T
Q  117 at 118  Q
    ||    
T  13147537 at 13147536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 20214034 - 20214135
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20214034 acatcaattgtacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaac 20214133  T
Q  117 at 118  Q
    ||    
T  20214134 at 20214135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 12323095 - 12322994
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12323095 acatcaattctacacaaattcaacggattttctattctattaacaaccaagtacaacttcaaaacctaattcccaaatttccataactacaacctacaac 12322996  T
Q  117 at 118  Q
    ||    
T  12322995 at 12322994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 12372161 - 12372262
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  12372161 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctgcaac 12372260  T
Q  117 at 118  Q
    ||    
T  12372261 at 12372262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 8851324 - 8851223
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  8851324 acatcaattctacacaaattcaacagattttatactctattaacaaccaattacaacttcaaaacctaatttccaaattctcataactacaacctacaac 8851225  T
Q  117 at 118  Q
    ||    
T  8851224 at 8851223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 16999320 - 16999422
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattccc-aaattcccataactacaacctacaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| || ||    
T  16999320 acatcaattctacacaaattcaacggattttctactctattaacaaccgattacaacttcaaaacctaattcccaaaattcccataactacaacatataa 16999419  T
Q  116 cat 118  Q
    |||    
T  16999420 cat 16999422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 11067355 - 11067456
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||| |||| ||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  11067355 acatcacttctccacaaattcaacgaattttctactctattaacaaccaattactacatcaaaacctaattcccaaattcccataactacaacctacaac 11067454  T
Q  117 at 118  Q
    ||    
T  11067455 at 11067456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 12127328 - 12127227
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  12127328 acataaattctacacaaattcaacgaattttctactctcttaacaaccaattacaacttcaaaacctaattcccaaatttccataactaaaacctacaac 12127229  T
Q  117 at 118  Q
    ||    
T  12127228 at 12127227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 20586239 - 20586340
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| || || |||||||||||||||||||||||||    
T  20586239 acatcaattctacacaaattcaacggattttctactctattaacaaccaattgcaacttcaaaccctagtttcctaattcccataactacaacctacaac 20586338  T
Q  117 at 118  Q
    ||    
T  20586339 at 20586340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 32433754 - 32433653
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  32433754 acatcacttctacacaaattcaactaattttctactctattaacaaccaattacaacttcaaaacctaattcacaaattcacataactacaacctacaac 32433655  T
Q  117 at 118  Q
    ||    
T  32433654 at 32433653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 10277215 - 10277315
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  10277215 acatcacttctac-caaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 10277313  T
Q  117 at 118  Q
    ||    
T  10277314 at 10277315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 24270112 - 24270037
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaa 92  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24270112 acatcaattgtacacaaattcaatggattttctactctattaacaaccaattacgacttcaaaacctaattcccaa 24270037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 12662362 - 12662439
Alignment:
Q  120 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaa 197  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||   ||||||||| ||||    
T  12662362 aagccaattcatggtcctttaatctatttccttttaagaatttgtattagcctttaaaagaaggagaggaaatcagaa 12662439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 111
Target Start/End: Original strand, 33002053 - 33002141
Alignment:
Q  22 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacct 111  Q
    |||||||||| |||||||| |||| |||||| |   ||||||||||||||||||| || ||||||||||||||||||| |||||||||||    
T  33002053 aattctacaccaattcaacagattctctactattacaacaaccaattacaacttctaaccctaattcccaaattccca-aactacaacct 33002141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 15095759 - 15095703
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  15095759 caactaattacaacttctaaacctaattcccaaattcccaaaactacaacctacaac 15095703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 15140143 - 15140199
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||    
T  15140143 caaccaattacaacttttaaacctaattcccaaattcccaaaactacaacctacaac 15140199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 8135359 - 8135303
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||| ||||||||||| |||||||| | ||||||||||||||||    
T  8135359 caaccaattacaacttctaaacctaattctcaaattcctaaaactacaacctacaac 8135303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 13132443 - 13132387
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||| ||||||||||| |||||||||||||||||||||| |||||| |||||||||    
T  13132443 caaccgattacaacttctaaacctaattcccaaattcccaaaactacgacctacaac 13132387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 47974944 - 47974889
Alignment:
Q  58 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 113  Q
    ||||||||||||||||||| |||| ||||||||||||| ||| |||||||||||||    
T  47974944 aacaaccaattacaacttctaaacataattcccaaatttccaaaactacaacctac 47974889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 12557853 - 12557907
Alignment:
Q  62 accaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||| ||||||| |||||||||| ||||||||||| ||||||||||||||||    
T  12557853 accaatttcaacttctaaacctaatttccaaattcccaaaactacaacctacaac 12557907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 13698761 - 13698703
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 118  Q
    ||||||||||||||||| || ||||||||||||||| ||| |||||||||||| |||||    
T  13698761 caaccaattacaacttctaaccctaattcccaaatttccaaaactacaacctaaaacat 13698703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 15623950 - 15624005
Alignment:
Q  61 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||| | ||||||||||| |||||||||| |||||||| |||||||    
T  15623950 aaccaattacaactcctaaacctaattctcaaattcccaaaactacaaactacaac 15624005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 25942358 - 25942401
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaac 60  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||    
T  25942358 acatcaattgtacacaaattcaatggattttctactctattaac 25942401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 25943041 - 25943084
Alignment:
Q  53 ctattaacaaccaattacaacttcaaaacctaattcccaaattc 96  Q
    |||||||||||||||||| |||||||||||||||| ||||||||    
T  25943041 ctattaacaaccaattacgacttcaaaacctaatttccaaattc 25943084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 35771554 - 35771508
Alignment:
Q  70 caacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  35771554 caacttctaaacctaattcccaaatttccaaaactacaacctacaac 35771508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 112
Target Start/End: Original strand, 41284963 - 41285013
Alignment:
Q  62 accaattacaacttcaaaacctaattcccaaattcccataactacaaccta 112  Q
    |||||||| |||||| |||||||||||||||||||| | ||||||||||||    
T  41284963 accaattataacttctaaacctaattcccaaattcctaaaactacaaccta 41285013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 48807448 - 48807392
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||   ||| |||||||||||||||| |||||||| |||||||    
T  48807448 caaccaattacaacttctgtaccaaattcccaaattcccaaaactacaatctacaac 48807392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 4071759 - 4071805
Alignment:
Q  70 caacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||| ||||||||||| ||||| |||| ||||||||||||||||    
T  4071759 caacttctaaacctaattctcaaatccccaaaactacaacctacaac 4071805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 14219008 - 14218962
Alignment:
Q  70 caacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||| |||||||||||| |||||| || ||||||||||||||||    
T  14219008 caacttctaaacctaattccaaaattctcaaaactacaacctacaac 14218962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 116
Target Start/End: Complemental strand, 36685253 - 36685211
Alignment:
Q  74 ttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||| ||||||||||||||| ||| ||||||||||||||||    
T  36685253 ttcaaaccctaattcccaaatttccaaaactacaacctacaac 36685211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 11054642 - 11054699
Alignment:
Q  60 caaccaattacaacttcaaaacctaatt-cccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||  || ||||||| |||||||||||| || |||||||||||||    
T  11054642 caaccaattacaacttataaccctaatttcccaaattcccaaaattacaacctacaac 11054699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 1e-50; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 25091540 - 25091641
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25091540 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 25091639  T
Q  117 at 118  Q
    ||    
T  25091640 at 25091641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 11425825 - 11425931
Alignment:
Q  12 gatggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacct 111  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11425825 gatgaacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaatttcaaaacctaattcccaaattcccataactacaacct 11425924  T
Q  112 acaacat 118  Q
    |||||||    
T  11425925 acaacat 11425931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 10356601 - 10356500
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10356601 acatcaattctacacaaattcaacggattttctactctattaactaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 10356502  T
Q  117 at 118  Q
    ||    
T  10356501 at 10356500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 53630639 - 53630538
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53630639 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 53630540  T
Q  117 at 118  Q
    ||    
T  53630539 at 53630538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 16998412 - 16998513
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16998412 acatcaatactacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 16998511  T
Q  117 at 118  Q
    ||    
T  16998512 at 16998513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 42875684 - 42875785
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42875684 acatcaattctacacaaattcaacggattttctactctattaacaatcaattacaacttcaaaacctatttcccaaattcccataactacaacctacaac 42875783  T
Q  117 at 118  Q
    ||    
T  42875784 at 42875785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 15115109 - 15115210
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  15115109 acatcaattctacacaaattcaacagattttctactctattaacaaccaattacaacttcaaaaaataattcccaaattcccataactacaacctacaac 15115208  T
Q  117 at 118  Q
    ||    
T  15115209 at 15115210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 37019561 - 37019658
Alignment:
Q  21 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 118  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37019561 caattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctacaacat 37019658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 19610211 - 19610312
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||    
T  19610211 acatcaattctacacaaatttaacggattttctactctattaacaaccaattacaacgtcaaaacttaattctcaaattcccataactacaacctacaac 19610310  T
Q  117 at 118  Q
    ||    
T  19610311 at 19610312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 6633701 - 6633601
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  6633701 acatcacttctac-caaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 6633603  T
Q  117 at 118  Q
    ||    
T  6633602 at 6633601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 46001695 - 46001595
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  46001695 acatcacttctac-caaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 46001597  T
Q  117 at 118  Q
    ||    
T  46001596 at 46001595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 26921774 - 26921708
Alignment:
Q  29 cacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaatt 95  Q
    ||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26921774 cacaaattcattggattttctactctattaacaaccaattacgacttcaaaacctaattcccaaatt 26921708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 9924085 - 9924139
Alignment:
Q  62 accaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||| |||||||||| ||||||||||| |||| |||||||||||    
T  9924085 accaattacaacttctaaacctaatttccaaattcccaaaacttcaacctacaac 9924139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 14549695 - 14549743
Alignment:
Q  65 aattacaacttcaaaacctaattcccaaattcccataactacaacctac 113  Q
    |||||||||||| |||||||||||||||||| ||| |||||||||||||    
T  14549695 aattacaacttctaaacctaattcccaaatttccaaaactacaacctac 14549743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 9870568 - 9870513
Alignment:
Q  60 caaccaattacaacttcaaaacctaatt-cccaaattcccataactacaacctaca 114  Q
    ||||||||||||||||| || ||||||| |||||||||||| ||||||||||||||    
T  9870568 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacctaca 9870513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 27028642 - 27028708
Alignment:
Q  27 tacacaaattcaacggattttctactctattaacaaccaattacaact-tcaaaacctaattcccaa 92  Q
    ||||||||||| | |||||||||| || ||||||||| |||| ||| | ||||||||||||||||||    
T  27028642 tacacaaattctatggattttctattcaattaacaactaattgcaattctcaaaacctaattcccaa 27028708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 9638939 - 9638972
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  9638939 caaccaattacaacttctaaacctaattcccaaa 9638972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 11478772 - 11478720
Alignment:
Q  64 caattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||| ||| |||||||||| ||||||||||| |||| ||| |||||||    
T  11478772 caattacaagttctaaacctaatttccaaattcccaaaacttcaatctacaac 11478720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 1e-50; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 24516073 - 24516174
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24516073 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 24516172  T
Q  117 at 118  Q
    ||    
T  24516173 at 24516174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 17307373 - 17307474
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17307373 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 17307472  T
Q  117 at 118  Q
    ||    
T  17307473 at 17307474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 27484642 - 27484541
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27484642 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaac 27484543  T
Q  117 at 118  Q
    ||    
T  27484542 at 27484541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 9975816 - 9975917
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9975816 acatcaattctacacaaattcagcggattgtctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 9975915  T
Q  117 at 118  Q
    ||    
T  9975916 at 9975917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 24436535 - 24436636
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24436535 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaatttccaaattcccataactacaacctacaac 24436634  T
Q  117 at 118  Q
    ||    
T  24436635 at 24436636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 5031297 - 5031193
Alignment:
Q  14 tggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 113  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5031297 tggacatcacttctacacaaattcaacgaattttatactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 5031198  T
Q  114 aacat 118  Q
    |||||    
T  5031197 aacat 5031193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 24781005 - 24780909
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 113  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24781005 acatcacttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 24780909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 19201365 - 19201264
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19201365 acatcaattctacccaaattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcctataactacaacctacaac 19201266  T
Q  117 at 118  Q
    ||    
T  19201265 at 19201264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 40912207 - 40912308
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40912207 acatcatttctacacaaattcaacgaattttctactctattaacaaccaactacaacttcaaaacctaattcccaaattcccataactacaacctacaac 40912306  T
Q  117 at 118  Q
    ||    
T  40912307 at 40912308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 36841151 - 36841252
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  36841151 acatcaattctacacaaattcaacatattttctactctattaacaaccaattacaacttcaaaacctaatttctaaattcccataactacaacctacaac 36841250  T
Q  117 at 118  Q
    ||    
T  36841251 at 36841252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 22251600 - 22251512
Alignment:
Q  30 acaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 118  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22251600 acaaattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 22251512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 2523912 - 2523811
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| || ||||||||||| |||||||||||||| |||||||||||||    
T  2523912 acatcaattctgcacaaattcaacgaattttctactctattaataaccaattacaatttaaaaacctaatttccaaattcccataaatacaacctacaac 2523813  T
Q  117 at 118  Q
    ||    
T  2523812 at 2523811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 37270587 - 37270687
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||| |||||||||||||||||||    
T  37270587 acatcacttctac-caaattcaacggattttctactctattaacaacccattacaacttcaaaacttaattctcaaattctcataactacaacctacaac 37270685  T
Q  117 at 118  Q
    ||    
T  37270686 at 37270687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 25142133 - 25142189
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  25142133 caaccaattacaacttctaaacctaattcccaaattcccaaaactacaacctacaac 25142189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 1383667 - 1383612
Alignment:
Q  58 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 113  Q
    ||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||    
T  1383667 aacaaccaattacaacttctaaacctaattcccaaatttccaaaactacaacctac 1383612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 3539766 - 3539822
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||| ||||||||||| |||||||| | ||||||||||||||||    
T  3539766 caaccaattacaacttctaaacctaattctcaaattccaaaaactacaacctacaac 3539822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 357809 - 357864
Alignment:
Q  58 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 113  Q
    ||||||||||||||||||| |||||||||||||||||| | | |||||||||||||    
T  357809 aacaaccaattacaacttctaaacctaattcccaaatttcaaaaactacaacctac 357864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 24884399 - 24884453
Alignment:
Q  59 acaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 113  Q
    |||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  24884399 acaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 24884453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 19358820 - 19358877
Alignment:
Q  60 caaccaattacaacttcaaaacctaatt-cccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||| || ||||||| |||||||||||| |||||||||| |||||    
T  19358820 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacccacaac 19358877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 18388312 - 18388256
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||| || ||||||| || | ||||||||||||||||| ||||||||||||||||    
T  18388312 caaccatttgcaacttctaaccataattcccaaattcccaaaactacaacctacaac 18388256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 27852605 - 27852653
Alignment:
Q  68 tacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||| ||| |||||||||||||||||| ||| ||||||||||||    
T  27852605 tacaacttctaaatctaattcccaaattcccaaaacaacaacctacaac 27852653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 22259974 - 22260024
Alignment:
Q  65 aattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||| || ||||||||||||||||| | ||||||||||||||||    
T  22259974 aattacaacttctaagcctaattcccaaattccta-aactacaacctacaac 22260024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 114
Target Start/End: Complemental strand, 18390326 - 18390282
Alignment:
Q  70 caacttcaaaacctaattcccaaattcccataactacaacctaca 114  Q
    ||||||| || ||||||||||||||||||| ||||||||| ||||    
T  18390326 caacttctaatcctaattcccaaattcccaaaactacaacataca 18390282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 861 - 760
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  861 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 762  T
Q  117 at 118  Q
    ||    
T  761 at 760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 11439 - 11338
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11439 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaac 11340  T
Q  117 at 118  Q
    ||    
T  11339 at 11338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 3e-48; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 7827859 - 7827960
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7827859 acatcaattctacacaaattcaaccgattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 7827958  T
Q  117 at 118  Q
    ||    
T  7827959 at 7827960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 19655396 - 19655295
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19655396 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 19655297  T
Q  117 at 118  Q
    ||    
T  19655296 at 19655295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 15890877 - 15890776
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||    
T  15890877 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattaacaaaactacaacctacaac 15890778  T
Q  117 at 118  Q
    ||    
T  15890777 at 15890776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 23150452 - 23150351
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23150452 acatcaattctacacaaattcaacaaattttatactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 23150353  T
Q  117 at 118  Q
    ||    
T  23150352 at 23150351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 27125642 - 27125541
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27125642 acatcacttctatacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaagtcccaaattcccataactacaacctacaac 27125543  T
Q  117 at 118  Q
    ||    
T  27125542 at 27125541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 27330131 - 27330045
Alignment:
Q  32 aaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27330131 aaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattgccataactacaacctacaacat 27330045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 27390871 - 27390785
Alignment:
Q  32 aaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27390871 aaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattgccataactacaacctacaacat 27390785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 18703451 - 18703556
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaatt----acaacttcaaaacctaattcccaaattcccataactacaaccta 112  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||    |||||||||||| |||||||||||||||||||||||||||||||    
T  18703451 acatcacttctatacaaattcaacggattttctactctattaacaaccaattaattacaacttcaaaatctaattcccaaattcccataactacaaccta 18703550  T
Q  113 caacat 118  Q
    ||||||    
T  18703551 caacat 18703556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 18709386 - 18709491
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaatt----acaacttcaaaacctaattcccaaattcccataactacaaccta 112  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||    |||||||||||| |||||||||||||||||||||||||||||||    
T  18709386 acatcacttctatacaaattcaacggattttctactctattaacaaccaattaattacaacttcaaaatctaattcccaaattcccataactacaaccta 18709485  T
Q  113 caacat 118  Q
    ||||||    
T  18709486 caacat 18709491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 13826181 - 13826258
Alignment:
Q  120 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaa 197  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  13826181 aagccaattcatggtcctttaatttatttccttttaagaatttgtatcagcctttaaaagaaaaagaggaaatcagaa 13826258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 19167998 - 19167926
Alignment:
Q  21 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaa 93  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19167998 caattgtacacaaattcaatggattttctactctattaacaaccaattacgacttcaaaacctaattcccaaa 19167926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 123 - 202
Target Start/End: Original strand, 14474073 - 14474152
Alignment:
Q  123 ccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaattgag 202  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| | ||||||||| |||| ||||    
T  14474073 ccaattcatggtcctttaatctatttccttttaagaatttgtttcagcctttaaaagaaagagaggaaatcagaagtgag 14474152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 19235015 - 19235089
Alignment:
Q  21 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattc 96  Q
    ||||| ||||||| ||||| |||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||    
T  19235015 caattgtacacaagttcaatggattttctactttattaacaaccaattacgacttcaaaacctaa-tcccaaattc 19235089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 30673556 - 30673480
Alignment:
Q  21 caattctacacaaattcaacggattttctactctattaacaacc-aattacaacttcaaaacctaattcccaaattc 96  Q
    ||||| ||||||||||||| | |||||||||||||||||||||| |||||| | |||||||||||||||| ||||||    
T  30673556 caattgtacacaaattcaatgaattttctactctattaacaaccaaattactaattcaaaacctaattccaaaattc 30673480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 28948466 - 28948539
Alignment:
Q  22 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaatt 95  Q
    |||||||||| ||||||||  |||||||||| |   ||||||||||||||||||| ||||||||||||||||||    
T  28948466 aattctacaccaattcaacatattttctactattaaaacaaccaattacaacttctaaacctaattcccaaatt 28948539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 18585733 - 18585788
Alignment:
Q  58 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 113  Q
    ||||||||||||||||||| |||||||||||| ||||| ||| |||||||||||||    
T  18585733 aacaaccaattacaacttctaaacctaattcctaaatttccaaaactacaacctac 18585788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 18928614 - 18928666
Alignment:
Q  64 caattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||| |||||||||| ||||||||||| |||| |||||||||||    
T  18928614 caattacaacttctaaacctaatttccaaattcccaaaacttcaacctacaac 18928666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 19401028 - 19401080
Alignment:
Q  64 caattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||  ||||||||||| |||||||||| ||||||||||||||||    
T  19401028 caattacaacttataaacctaattctcaaattcccaaaactacaacctacaac 19401080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 18259328 - 18259262
Alignment:
Q  27 tacacaaattcaacggattttctactctattaacaaccaattacaact-tcaaaacctaattcccaa 92  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||| | ||||||||||||||||||    
T  18259328 tacacaaattctatggattttctattcaattaacaactaattacaattctcaaaacctaattcccaa 18259262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 23501601 - 23501658
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaa-ttcccataactacaacctacaac 116  Q
    |||| |||||||||||| |||||||||||||||| |||| | ||||||||||||||||    
T  23501601 caacaaattacaacttctaaacctaattcccaaatttccaaaaactacaacctacaac 23501658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 118
Target Start/End: Original strand, 24267801 - 24267837
Alignment:
Q  82 ctaattcccaaattcccataactacaacctacaacat 118  Q
    ||||||| |||||||||||||||||||||||||||||    
T  24267801 ctaattctcaaattcccataactacaacctacaacat 24267837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 3e-48; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 19676598 - 19676699
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19676598 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 19676697  T
Q  117 at 118  Q
    ||    
T  19676698 at 19676699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 21046214 - 21046113
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21046214 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaac 21046115  T
Q  117 at 118  Q
    ||    
T  21046114 at 21046113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 42912936 - 42913037
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  42912936 acatcaattctacacaaattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcctaaattcccacaactacaacctacaac 42913035  T
Q  117 at 118  Q
    ||    
T  42913036 at 42913037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 16058478 - 16058378
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  16058478 acatcacttctacacaaattcaacggattttctactctattaacaaccaattacaacttc-aaacctaattcccaaatttccataactacaacctacaac 16058380  T
Q  117 at 118  Q
    ||    
T  16058379 at 16058378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 20633799 - 20633695
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattccc---ataactacaacctac 113  Q
    ||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||||    
T  20633799 acatcaattctacacaaattcaacttattttttattctattaacaaccaattacaacttcaaaacctaattcccaaattcccataataactataacctac 20633700  T
Q  114 aacat 118  Q
    |||||    
T  20633699 aacat 20633695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 45497278 - 45497363
Alignment:
Q  120 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaattgaggac 205  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||| |||| |||||||    
T  45497278 aagccaattcatggtcctttaatctatttccttttaagaatttgcatcagcctttaaaagaaaaagaggaaatcagaactgaggac 45497363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 51324396 - 51324487
Alignment:
Q  22 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 113  Q
    |||||||||| |||||||  ||||||||||| |   ||||||||||||||||||  ||||||||||||||| |||||| |||||||||||||    
T  51324396 aattctacaccaattcaatagattttctactattaaaacaaccaattacaacttttaaacctaattcccaatttcccaaaactacaacctac 51324487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 44822145 - 44822090
Alignment:
Q  58 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 113  Q
    ||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||    
T  44822145 aacaaccaattacaacttctaaacctaattcccaaatttccagaactacaacctac 44822090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 7320716 - 7320660
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||| || |||| ||||||||||||||||| |||||||| |||||||    
T  7320716 caaccaattacaacatctaaacataattcccaaattcccaaaactacaatctacaac 7320660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 22350646 - 22350702
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||| || ||||||| || ||||||||||||||||||| ||||||||||||||||    
T  22350646 caaccatttgcaacttctaaccctaattcccaaattcccaaaactacaacctacaac 22350702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 21168825 - 21168899
Alignment:
Q  21 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattc 96  Q
    ||||| ||||||||||||| ||||||||||||||||||| || |||  || | |||||||||| ||||||||||||    
T  21168825 caattgtacacaaattcaatggattttctactctattaa-aaacaaaaactaattcaaaaccttattcccaaattc 21168899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 13302849 - 13302887
Alignment:
Q  78 aaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  13302849 aaacctaattcccaaattcccaaaactacaacctacaac 13302887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 24723475 - 24723420
Alignment:
Q  58 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 113  Q
    ||||||||||||||||||| |||| |||||| |||||| ||| |||||||| ||||    
T  24723475 aacaaccaattacaacttctaaacataattctcaaatttccaaaactacaatctac 24723420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 7052046 - 7052009
Alignment:
Q  58 aacaaccaattacaacttcaaaacctaattcccaaatt 95  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  7052046 aacaaccaattacaatttctaaacctaattcccaaatt 7052009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 8276112 - 8276079
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  8276112 caaccaattacaacttctaaacctaattcccaaa 8276079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 38056795 - 38056762
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  38056795 caaccaattacaacttctaaacctaattcccaaa 38056762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 4595995 - 4595935
Alignment:
Q  33 aattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaa 93  Q
    |||||| |||||| ||||||||   | ||||||||||||||||| ||| ||||||||||||    
T  4595995 aattcatcggattatctactcttaaatcaaccaattacaacttctaaatctaattcccaaa 4595935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 633 - 532
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  633 acatcaattctacacaaattcaacttattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 534  T
Q  117 at 118  Q
    ||    
T  533 at 532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 4879 - 4778
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4879 acatcacttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacgacctacaac 4780  T
Q  117 at 118  Q
    ||    
T  4779 at 4778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 1052 - 1153
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  1052 acatcaattctacacaaattcaacggattttctattctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctaaaac 1151  T
Q  117 at 118  Q
    ||    
T  1152 at 1153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 405 - 506
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  405 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaatttccaaattctcataactacaacctacaac 504  T
Q  117 at 118  Q
    ||    
T  505 at 506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 13557 - 13456
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  13557 acatcaattctacacaaattcaacggattttctactctattaacaaccaattataacttcaaaacctaattcccaaattcccaaaactacaacctacaac 13458  T
Q  117 at 118  Q
    ||    
T  13457 at 13456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 5270 - 5371
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5270 acatcaattctacacaaattcaaaggattttctactctattaacaaccaattacgacttcaaaacctaattcccaaattcccataactacaacctacaac 5369  T
Q  117 at 118  Q
    ||    
T  5370 at 5371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 22 - 118
Target Start/End: Complemental strand, 12693 - 12597
Alignment:
Q  22 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12693 aattctatacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctataacat 12597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 58633 - 58734
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  58633 acatcaattctatacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctacaac 58732  T
Q  117 at 118  Q
    ||    
T  58733 at 58734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 146610 - 146711
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  146610 acatcaattctacacaaattcaacggatttcctactctattaacaaccaattataacttcaaaacctaattcccaaattcccataactacaacctacaac 146709  T
Q  117 at 118  Q
    ||    
T  146710 at 146711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 169164 - 169063
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  169164 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaagttcaaaacctaattcccaaattcccataactacaacctacaac 169065  T
Q  117 at 118  Q
    ||    
T  169064 at 169063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 143498 - 143599
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||   ||||||||||||||||||    
T  143498 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacataattcccaaattaaaataactacaacctacaac 143597  T
Q  117 at 118  Q
    ||    
T  143598 at 143599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 1092 - 1193
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  1092 acatcaattctacacaaattcaacggattttctattctattaacaaccaattacaacttcaaaacctaattcccaaattacaataactacaacctacaac 1191  T
Q  117 at 118  Q
    ||    
T  1192 at 1193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 34226 - 34327
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  34226 acatcaattctacacaaattcaacaaattttctactctattaacaaccaattacaacttcaaaacctgattcccaaattcccataactacaacctacaac 34325  T
Q  117 at 118  Q
    ||    
T  34326 at 34327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 90; Significance: 2e-43; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 77574 - 77675
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  77574 acatcaattatacacaaattcaacggattttctactctattaacaacctattacaacttcaaaacctaattctcaaattcccataactacaacctacaac 77673  T
Q  117 at 118  Q
    ||    
T  77674 at 77675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 31881 - 31982
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  31881 acatcacttctacacaaattcaacgaattttctgctctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctataac 31980  T
Q  117 at 118  Q
    ||    
T  31981 at 31982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 37188 - 37289
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  37188 acatcacttctacacaaattcaacgaattttctgctctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctataac 37287  T
Q  117 at 118  Q
    ||    
T  37288 at 37289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 21958 - 21857
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21958 acatcaattctacacaaattcaacttattttttactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataaatacaacctacaac 21859  T
Q  117 at 118  Q
    ||    
T  21858 at 21857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 4e-41; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 21300209 - 21300108
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  21300209 acatcaattctacacaaatttaacagattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactactacctacaac 21300110  T
Q  117 at 118  Q
    ||    
T  21300109 at 21300108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 19921525 - 19921626
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||| |||||||||||||    
T  19921525 acatcaattctacacaaattcaacagattttctactctattaacaactaattataacttcaaaacctaattcccaaatttccataattacaacctacaac 19921624  T
Q  117 at 118  Q
    ||    
T  19921625 at 19921626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 118
Target Start/End: Original strand, 7484903 - 7484990
Alignment:
Q  31 caaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  7484903 caaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaacat 7484990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 22961514 - 22961437
Alignment:
Q  120 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaa 197  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  22961514 aagccaattcatggtcctttaatctatttccttttaagaatttgtatcagcctttaaaagaaaaagaggaaatcagaa 22961437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 20566445 - 20566515
Alignment:
Q  21 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattccca 91  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20566445 caattctacacaaattctacggattttctattctattaacaaccaattacaacttcaaaacctaattccca 20566515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 31622028 - 31622090
Alignment:
Q  33 aattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaatt 95  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31622028 aattcaatggattttctactctattaacaaccaattacgacttcaaaacctaattcccaaatt 31622090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 31456888 - 31456943
Alignment:
Q  58 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 113  Q
    ||||||||||||||||||| |||||||||| ||||||| ||| |||||||||||||    
T  31456888 aacaaccaattacaacttctaaacctaatttccaaatttccaaaactacaacctac 31456943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 36508757 - 36508702
Alignment:
Q  58 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 113  Q
    ||||||||||||||||||| |||| ||||||||||||| ||| |||||||||||||    
T  36508757 aacaaccaattacaacttctaaacataattcccaaatttccaaaactacaacctac 36508702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 17876132 - 17876186
Alignment:
Q  59 acaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 113  Q
    |||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  17876132 acaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 17876186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 21405751 - 21405694
Alignment:
Q  60 caaccaattacaacttcaaaacctaatt-cccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||| || ||||||| |||||||||||| |||||||||| |||||    
T  21405751 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacccacaac 21405694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 22111715 - 22111764
Alignment:
Q  29 cacaaattcaacggattttctactctattaacaaccaattacaacttcaa 78  Q
    ||||||||||  ||||||||| |||||||||||||||||||| |||||||    
T  22111715 cacaaattcattggattttctgctctattaacaaccaattacgacttcaa 22111764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 21618047 - 21617995
Alignment:
Q  64 caattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||| ||||||| || |||||||| |||||||||| ||||||||||||||||    
T  21618047 caatttcaacttctaaccctaattctcaaattcccaaaactacaacctacaac 21617995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 97
Target Start/End: Complemental strand, 30138098 - 30138059
Alignment:
Q  58 aacaaccaattacaacttcaaaacctaattcccaaattcc 97  Q
    ||||||||||||||||||| ||||||||||||||| ||||    
T  30138098 aacaaccaattacaacttctaaacctaattcccaatttcc 30138059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 112
Target Start/End: Complemental strand, 31252011 - 31251961
Alignment:
Q  62 accaattacaacttcaaaacctaattcccaaattcccataactacaaccta 112  Q
    |||||||| |||||| ||||||||||| |||||||| | ||||||||||||    
T  31252011 accaattataacttctaaacctaattctcaaattcctaaaactacaaccta 31251961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 82; Significance: 9e-39; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 328455 - 328354
Alignment:
Q  17 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| || ||||    
T  328455 acatcaattctacacaaattcaactgattttctactctattaacaaccaattacaacttcgaaacctaattcccaaatttccataactacaatcttcaac 328356  T
Q  117 at 118  Q
    ||    
T  328355 at 328354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 72841 - 72910
Alignment:
Q  27 tacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattc 96  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  72841 tacacaaattcaatggattttctattctattaacaaccaattacaacttcaaaacctaattcacaaattc 72910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 75691 - 75752
Alignment:
Q  29 cacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattc 96  Q
    ||||||||||| |||||||||| ||||||||||||||||||      |||||||||||||||||||||    
T  75691 cacaaattcaatggattttctattctattaacaaccaatta------caaaacctaattcccaaattc 75752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 23727 - 23615
Alignment:
Q  120 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaattgaggacgagatttttacaga 219  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||  ||||||| ||||||| ||||    
T  23727 aagccacttcatggtcctttaatctatttccttttaagaatttgtatcagcctttaaaagaaaaagaggaaatcagaaccgaggacgggatttttccaga 23628  T
Q  220 agcaaaaaacatc 232  Q
    |||||||||||||    
T  23627 agcaaaaaacatc 23615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 24235 - 24195
Alignment:
Q  78 aaacctaattcccaaattcccataactacaacctacaacat 118  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24235 aaacctaattcccaaattcccataactacaacctacaacat 24195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 19652 - 19727
Alignment:
Q  21 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattc 96  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19652 caattctacacaaattcaatggattttctactctattaacaaccaattacaacttaaaaacctaattcccaaattc 19727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 78955 - 79025
Alignment:
Q  21 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattccca 91  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  78955 caattctacacaaattcaatggattttctactttattaacaaccaattacaacttcaaaacctaattccca 79025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 121707 - 121784
Alignment:
Q  120 aagccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaagacaaagaggaaattagaa 197  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||    
T  121707 aagccaattcatggtcctttaatctatttccttttaagaatttgtgtcagcctttaaaagaaaaagaggaaatcagaa 121784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 29711 - 29637
Alignment:
Q  43 attttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 118  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29711 attttctac-ctatttacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacgacat 29637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 21539 - 21594
Alignment:
Q  58 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 113  Q
    ||||||||||||||||||| |||| ||||||||||||| ||| |||||||| ||||    
T  21539 aacaaccaattacaacttctaaacataattcccaaatttccaaaactacaagctac 21594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 113127 - 113034
Alignment:
Q  22 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||| ||||||||  |||||||||| | | ||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||    
T  113127 aattctacaccaattcaacaaattttctactgt-taaacaaccaattacaacttctaaacctaattcccaaattcccaaaattacaacctacaac 113034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 81501 - 81553
Alignment:
Q  64 caattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  81501 caattacaacttctaaacctaattcccaaattcccaaaactacaacctacaac 81553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 117960 - 117890
Alignment:
Q  22 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaa 93  Q
    |||||||| | |||||||  ||||||||||| | | ||||||||||||||||||| ||||||||||||||||    
T  117960 aattctacgccaattcaatagattttctactgt-taaacaaccaattacaacttctaaacctaattcccaaa 117890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1904 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold1904
Description:

Target: scaffold1904; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 36 - 93
Alignment:
Q  123 ccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaaga 180  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  36 ccaattcatggtcctttaatctatttccttttaagaatttgtatcagcctttaaaaga 93  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1312 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold1312
Description:

Target: scaffold1312; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 2018 - 2075
Alignment:
Q  123 ccaattcatggtcctttaatctattttcttttaagaatttgtatcagcctttaaaaga 180  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2018 ccaattcatggtcctttaatctatttccttttaagaatttgtatcagcctttaaaaga 2075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 54; Significance: 5e-22; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 11287 - 11356
Alignment:
Q  27 tacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattc 96  Q
    |||| ||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11287 tacaaaaagtcaatggattttctattctattaacaaccaattacaacttcaaaacctaattcccaaattc 11356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 5167 - 5236
Alignment:
Q  27 tacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattc 96  Q
    |||| ||| |||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  5167 tacaaaaagtcaatggattttctattctattaacaaccaattacaacttcaaaacgtaattcccaaattc 5236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 19605 - 19672
Alignment:
Q  28 acacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattc 96  Q
    |||||||||||| |||||||||| | ||||||||| |||||||||||||| |||||||||| |||||||    
T  19605 acacaaattcaatggattttctatt-tattaacaatcaattacaacttcataacctaattctcaaattc 19672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 6686 - 6620
Alignment:
Q  29 cacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaatt 95  Q
    ||||||||||  |||| ||||||||||||||||||||||||| || |||||||||||||||||||||    
T  6686 cacaaattcattggatcttctactctattaacaaccaattacgacatcaaaacctaattcccaaatt 6620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 26779 - 26713
Alignment:
Q  31 caaattcaacggattttctactctattaacaacc-aattacaacttcaaaacctaattcccaaattc 96  Q
    ||||||||| |||||||||||||||||||||||| |||||| | |||||||||||||||||||||||    
T  26779 caaattcaatggattttctactctattaacaaccaaattactaattcaaaacctaattcccaaattc 26713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 78298 - 78249
Alignment:
Q  69 acaacttcaaaacctaattcccaaattcccataactacaacctacaacat 118  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  78298 acaacttcaaaacctaatttccaaattcccataactacaacctacaacat 78249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 2787 - 2863
Alignment:
Q  21 caattctacacaaattcaacggattttctactctattaacaaccaa-ttacaacttcaaaacctaattcccaaattc 96  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||| |||| | ||||||||||||||| |||||||    
T  2787 caattatacacaaattcaaaggattttctattctattaacaaccaatttactaattcaaaacctaattcacaaattc 2863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 35418 - 35478
Alignment:
Q  56 ttaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||  ||||||||||||    
T  35418 ttaacaaccaattacgacttcaaaacctaattcccaaattcccaaaact--aacctacaacat 35478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 2143 - 2085
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 118  Q
    ||||||||||||||||  |||||||||||||||||| ||| ||||||||||||||||||    
T  2143 caaccaattacaacttataaacctaattcccaaatttccaaaactacaacctacaacat 2085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 16532 - 16592
Alignment:
Q  58 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 118  Q
    ||||||||||||||||||| |||||||||| ||||||| ||| ||||||||||||| ||||    
T  16532 aacaaccaattacaacttctaaacctaattgccaaatttccaaaactacaacctaccacat 16592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 3174 - 3118
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||| || ||||||||| ||||||||| ||||||||||||||||    
T  3174 caaccaattacaacttctaaccctaattcctaaattcccaaaactacaacctacaac 3118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 6809 - 6754
Alignment:
Q  58 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 113  Q
    ||||||||||||||||||| |||||||||||| ||||| ||| |||||||||||||    
T  6809 aacaaccaattacaacttctaaacctaattcctaaatttccaaaactacaacctac 6754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 10913 - 10821
Alignment:
Q  22 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||| |||||||  |||| |||||| |   ||||||||||||||||||| || ||||||||||||||||||| ||||| ||||||||||    
T  10913 aattctacaccaattcaatagattctctactattacaacaaccaattacaacttctaaccctaattcccaaattccca-aacta-aacctacaac 10821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 12323 - 12380
Alignment:
Q  59 acaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||| ||||||||||| ||||||||||| |||||| ||| ||||||||||||||||    
T  12323 acaacctattacaacttctaaacctaattctcaaatttccaaaactacaacctacaac 12380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 8571 - 8628
Alignment:
Q  60 caaccaattacaacttcaaaacctaatt-cccaaattcccataactacaacctacaac 116  Q
    ||||||||||||||||| || ||||||| |||||||||||| ||||||||||||||||    
T  8571 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacctacaac 8628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 18744 - 18810
Alignment:
Q  27 tacacaaattcaacggattttctactctattaacaaccaattacaact-tcaaaacctaattcccaa 92  Q
    ||||||||||| | |||||||||| || ||||||||| |||| ||| | ||||||||||||||||||    
T  18744 tacacaaattctatggattttctattcaattaacaactaattgcaattctcaaaacctaattcccaa 18810  T

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Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 158949 - 158888
Alignment:
Q  55 attaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||| |||||| || ||||||| || ||||||||||||||||||| ||||||||||||||||    
T  158949 attatcaaccatttgcaacttctaaccctaattcccaaattcccaaaactacaacctacaac 158888  T

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Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 135625 - 135570
Alignment:
Q  61 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||| ||||||| ||  |||||||||||||||||| ||||||||||||||||    
T  135625 aaccaatttcaacttctaactctaattcccaaattcccaaaactacaacctacaac 135570  T

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Target: scaffold0040 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 106175 - 106126
Alignment:
Q  58 aacaaccaattacaacttcaaaacctaattcccaaattcccataactaca 107  Q
    |||||||||||||||| || |||||||||||||||||| ||| |||||||    
T  106175 aacaaccaattacaacgtctaaacctaattcccaaatttccaaaactaca 106126  T

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Target: scaffold0859 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 4612 - 4664
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaattcccataactacaaccta 112  Q
    |||| |||||||||||| ||||||||||| |||||||||| ||| ||||||||    
T  4612 caactaattacaacttctaaacctaattctcaaattcccaaaaccacaaccta 4664  T

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Target: scaffold0180 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 28451 - 28395
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||| || ||||||| || ||||||| ||||||||||| ||||||||||||||||    
T  28451 caaccatttgcaacttctaaccctaatttccaaattcccaaaactacaacctacaac 28395  T

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Target: scaffold0379 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 96
Target Start/End: Original strand, 10741 - 10772
Alignment:
Q  65 aattacaacttcaaaacctaattcccaaattc 96  Q
    ||||||||||||||||||||||||||||||||    
T  10741 aattacaacttcaaaacctaattcccaaattc 10772  T

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Target: scaffold0251 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 20202 - 20152
Alignment:
Q  65 aattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||||| |||| ||||||||||||||||| ||||| ||||||||||    
T  20202 aattacaacttctaaacataattcccaaattccca-aactataacctacaac 20152  T

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Target: scaffold0123 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 118
Target Start/End: Original strand, 7205 - 7264
Alignment:
Q  60 caaccaattacaacttcaaaacctaattc-ccaaattcccataactacaacctacaacat 118  Q
    ||||||||||||||||| || |||||||  ||||||||||| ||||| ||||||||||||    
T  7205 caaccaattacaacttctaaccctaattttccaaattcccaaaactataacctacaacat 7264  T

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Target: scaffold0116 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 35586 - 35531
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaa 115  Q
    |||||| || ||||||| || | ||||||||||||||||| |||||||||||||||    
T  35586 caaccatttgcaacttctaaccttaattcccaaattcccaaaactacaacctacaa 35531  T

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Target: scaffold0628 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 1226 - 1125
Alignment:
Q  14 tggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 113  Q
    ||||||| | |||||||  |||||||| ||||| |||||||   | |||| |||||||||||| || ||||| |||||||||| || |||| ||||||||    
T  1226 tggacattatttctacatcaattcaacagattt-ctactcttaaatcaactaattacaacttctaaccctaaatcccaaattctcaaaactccaacctac 1128  T
Q  114 aac 116  Q
    |||    
T  1127 aac 1125  T

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Target: scaffold0577 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 116
Target Start/End: Original strand, 9004 - 9046
Alignment:
Q  74 ttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||| ||||||||||||||||| | ||||||||||||||||    
T  9004 ttcaaaccctaattcccaaattccaaaaactacaacctacaac 9046  T

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Target: scaffold0328 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 18764 - 18731
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  18764 caaccaattacaacttctaaacctaattcccaaa 18731  T

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Target: scaffold0220 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 13878 - 13911
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaa 93  Q
    ||||||||||||||||| ||||||||||||||||    
T  13878 caaccaattacaacttctaaacctaattcccaaa 13911  T

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Target: scaffold0151 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 31046 - 31094
Alignment:
Q  67 ttacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||||||  || ||||||||||||||||||| ||||||||||||||||    
T  31046 ttacaacttttaaccctaattcccaaattccca-aactacaacctacaac 31094  T

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Target: scaffold0056 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 115
Target Start/End: Original strand, 67060 - 67105
Alignment:
Q  70 caacttcaaaacctaattcccaaattcccataactacaacctacaa 115  Q
    ||||||| |||||| ||||||||||||| | |||||||||||||||    
T  67060 caacttctaaaccttattcccaaattcctaaaactacaacctacaa 67105  T

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Target: scaffold0308 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 13370 - 13426
Alignment:
Q  60 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 116  Q
    |||||| || ||||||  || ||||||||||||||||||| |||| |||||||||||    
T  13370 caaccatttgcaacttttaaccctaattcccaaattcccaaaacttcaacctacaac 13426  T

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