View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11196_low_5 (Length: 326)
Name: NF11196_low_5
Description: NF11196
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11196_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 8 - 274
Target Start/End: Complemental strand, 44654538 - 44654272
Alignment:
| Q |
8 |
aagcataggttgaggggatgcttagtcaaaagcagaagacattagagctcgaataatagtaaatatatacatctatctcattttaaaagtattaatagat |
107 |
Q |
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| T |
44654538 |
aagcctaggttgaggggatgcttagtcaaaagcagaagacattagagctcgaataatagtaaatatatacatctatctcgttttaaaagtattaatagat |
44654439 |
T |
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| Q |
108 |
cttgaaccaaaaacctccgagtccaaaacatatatttttattactagaacaaactctaggagtttaaagcaatgtcatatttttatataaaaagagatta |
207 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
44654438 |
cttgaaccaaaaatctccgagtccaaaacatatatttttattactagaacaaactctaggagtttaaagcaatgtcatgtttttatataaaaagagatta |
44654339 |
T |
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| Q |
208 |
gttacatctagtgaaaacgattgatcccaaacaatttaacctgacgaactaaaatcgaatcacaaac |
274 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
44654338 |
gttacatctagtgaaaacgattgatcccaaacaatttaacctgacaaactaaaatcgaatcacaaac |
44654272 |
T |
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