View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11196_low_8 (Length: 219)

Name: NF11196_low_8
Description: NF11196
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11196_low_8
NF11196_low_8
[»] chr1 (14 HSPs)
chr1 (1-206)||(41398293-41398497)
chr1 (1-206)||(41390638-41390842)
chr1 (1-188)||(25444931-25445117)
chr1 (1-188)||(1054854-1055039)
chr1 (1-188)||(39445557-39445742)
chr1 (1-188)||(44023716-44023901)
chr1 (49-188)||(25439738-25439875)
chr1 (1-123)||(24787280-24787404)
chr1 (124-204)||(24787148-24787226)
chr1 (1-175)||(43988314-43988492)
chr1 (123-186)||(24202573-24202635)
chr1 (1-123)||(24202686-24202809)
chr1 (123-186)||(19366112-19366174)
chr1 (123-186)||(19361237-19361298)
[»] chr5 (24 HSPs)
chr5 (1-206)||(15044743-15044947)
chr5 (1-206)||(1456986-1457190)
chr5 (1-206)||(27445027-27445231)
chr5 (1-206)||(27449871-27450075)
chr5 (1-206)||(43592336-43592540)
chr5 (1-206)||(43598781-43598985)
chr5 (1-206)||(43604273-43604477)
chr5 (1-206)||(43609765-43609969)
chr5 (1-175)||(28807429-28807600)
chr5 (1-145)||(37556506-37556650)
chr5 (1-145)||(37561328-37561472)
chr5 (1-122)||(30631463-30631586)
chr5 (1-175)||(33791373-33791549)
chr5 (1-175)||(2785432-2785608)
chr5 (1-123)||(31180271-31180394)
chr5 (123-204)||(30631640-30631719)
chr5 (123-204)||(31180447-31180526)
chr5 (1-175)||(31396843-31397021)
chr5 (123-204)||(24136080-24136159)
chr5 (1-175)||(31401700-31401878)
chr5 (1-175)||(33768236-33768417)
chr5 (123-186)||(35387893-35387955)
chr5 (15-123)||(24135920-24136028)
chr5 (123-186)||(38219629-38219691)
[»] chr2 (14 HSPs)
chr2 (1-206)||(39811812-39812016)
chr2 (1-188)||(32246845-32247031)
chr2 (1-175)||(19344478-19344655)
chr2 (1-175)||(19349336-19349513)
chr2 (1-89)||(44312563-44312652)
chr2 (123-204)||(11098711-11098790)
chr2 (1-123)||(11098843-11098967)
chr2 (123-204)||(9296186-9296265)
chr2 (123-204)||(14291722-14291801)
chr2 (1-123)||(14291545-14291669)
chr2 (1-123)||(9296317-9296441)
chr2 (123-186)||(25409860-25409922)
chr2 (1-123)||(3491807-3491930)
chr2 (123-186)||(3491981-3492043)
[»] chr7 (22 HSPs)
chr7 (1-206)||(31109407-31109611)
chr7 (1-206)||(24024151-24024354)
chr7 (1-199)||(12406388-12406585)
chr7 (1-206)||(12396968-12397172)
chr7 (1-175)||(19992370-19992544)
chr7 (1-175)||(21812092-21812266)
chr7 (123-204)||(20357331-20357410)
chr7 (125-204)||(4873310-4873387)
chr7 (123-204)||(1533228-1533307)
chr7 (123-204)||(2058202-2058281)
chr7 (1-175)||(24266054-24266230)
chr7 (1-123)||(20357463-20357587)
chr7 (1-175)||(24261175-24261351)
chr7 (1-123)||(1533359-1533484)
chr7 (1-123)||(2058022-2058147)
chr7 (123-186)||(21640039-21640101)
chr7 (123-186)||(21646237-21646299)
chr7 (123-186)||(18408993-18409055)
chr7 (1-34)||(4866787-4866820)
chr7 (15-123)||(21639880-21639988)
chr7 (1-123)||(21646063-21646186)
chr7 (123-186)||(18413869-18413931)
[»] chr6 (14 HSPs)
chr6 (1-204)||(14737403-14737604)
chr6 (1-204)||(14742263-14742464)
chr6 (1-206)||(11857031-11857235)
chr6 (1-206)||(22010521-22010725)
chr6 (1-191)||(28184562-28184754)
chr6 (1-188)||(28155412-28155597)
chr6 (1-188)||(6438558-6438743)
chr6 (1-175)||(16838801-16838977)
chr6 (1-175)||(6005474-6005650)
chr6 (1-175)||(33330297-33330473)
chr6 (1-175)||(33335794-33335970)
chr6 (123-204)||(5674554-5674633)
chr6 (1-123)||(5674685-5674810)
chr6 (94-175)||(5343628-5343710)
[»] scaffold0135 (1 HSPs)
scaffold0135 (1-206)||(34886-35090)
[»] chr8 (29 HSPs)
chr8 (1-206)||(7289750-7289954)
chr8 (1-188)||(25328120-25328306)
chr8 (1-188)||(39784665-39784850)
chr8 (1-123)||(6311354-6311477)
chr8 (1-175)||(35745448-35745624)
chr8 (123-206)||(6311532-6311613)
chr8 (123-204)||(18870345-18870424)
chr8 (123-204)||(30655880-30655959)
chr8 (1-123)||(36979434-36979558)
chr8 (1-175)||(10684116-10684292)
chr8 (123-204)||(10688924-10689003)
chr8 (123-204)||(18852951-18853030)
chr8 (111-188)||(25327994-25328070)
chr8 (1-123)||(30655703-30655827)
chr8 (123-204)||(33037592-33037671)
chr8 (1-122)||(33037724-33037846)
chr8 (1-123)||(18870477-18870602)
chr8 (123-205)||(4759857-4759938)
chr8 (1-123)||(18853083-18853208)
chr8 (123-186)||(1261758-1261820)
chr8 (1-123)||(4759991-4760115)
chr8 (123-204)||(36979611-36979689)
chr8 (1-123)||(10689058-10689183)
chr8 (123-184)||(31071035-31071095)
chr8 (1-123)||(1261871-1261994)
chr8 (123-186)||(26288121-26288183)
chr8 (123-186)||(26301378-26301440)
chr8 (123-186)||(26313372-26313434)
chr8 (123-186)||(7412569-7412629)
[»] chr4 (14 HSPs)
chr4 (1-206)||(9224231-9224435)
chr4 (1-206)||(9229018-9229222)
chr4 (1-203)||(51520514-51520715)
chr4 (1-188)||(45347658-45347845)
chr4 (1-188)||(3814081-3814266)
chr4 (1-188)||(45357138-45357324)
chr4 (1-188)||(5732722-5732907)
chr4 (1-151)||(18855784-18855933)
chr4 (117-206)||(18712590-18712677)
chr4 (1-123)||(24741997-24742121)
chr4 (123-204)||(24742174-24742253)
chr4 (123-204)||(29760874-29760954)
chr4 (1-75)||(56146664-56146739)
chr4 (1-121)||(29760698-29760821)
[»] chr3 (23 HSPs)
chr3 (1-206)||(22173019-22173223)
chr3 (1-188)||(18656492-18656677)
chr3 (1-123)||(28501613-28501737)
chr3 (1-123)||(28503780-28503904)
chr3 (1-175)||(2676939-2677115)
chr3 (1-175)||(24968164-24968340)
chr3 (1-175)||(2672783-2672959)
chr3 (1-123)||(7167301-7167425)
chr3 (123-204)||(7167478-7167558)
chr3 (123-204)||(28501480-28501560)
chr3 (123-204)||(28503647-28503727)
chr3 (123-204)||(2671370-2671449)
chr3 (1-175)||(8512274-8512450)
chr3 (1-175)||(8517154-8517330)
chr3 (123-204)||(40372580-40372659)
chr3 (123-201)||(8477598-8477674)
chr3 (123-205)||(8738846-8738926)
chr3 (123-204)||(9091085-9091164)
chr3 (1-120)||(8738982-8739103)
chr3 (1-120)||(9091220-9091341)
chr3 (1-123)||(8477419-8477545)
chr3 (1-123)||(26928507-26928631)
chr3 (123-184)||(1306179-1306239)
[»] scaffold0355 (2 HSPs)
scaffold0355 (31-206)||(3672-3845)
scaffold0355 (1-151)||(9521-9670)
[»] scaffold0464 (1 HSPs)
scaffold0464 (1-188)||(420-605)
[»] scaffold0259 (1 HSPs)
scaffold0259 (1-175)||(2103-2279)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-175)||(148808-148984)
[»] scaffold0197 (2 HSPs)
scaffold0197 (1-175)||(14161-14337)
scaffold0197 (1-175)||(19017-19193)
[»] scaffold0009 (1 HSPs)
scaffold0009 (80-175)||(176829-176925)
[»] scaffold0188 (2 HSPs)
scaffold0188 (123-186)||(17756-17818)
scaffold0188 (123-186)||(23849-23911)


Alignment Details
Target: chr1 (Bit Score: 190; Significance: 1e-103; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 41398293 - 41398497
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  41398293 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttccca 41398392  T
Q  101 ctctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41398393 ctctcacactatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaacccatttggttccctcc 41398491  T
Q  201 tttgct 206  Q
    ||||||    
T  41398492 tttgct 41398497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 41390638 - 41390842
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  41390638 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttccca 41390737  T
Q  101 ctctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41390738 ctctcacactatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaatccatttggttccctcc 41390836  T
Q  201 tttgct 206  Q
    ||||||    
T  41390837 tttgct 41390842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 25445117 - 25444931
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||| ||||||  ||||||||||||||||||||    
T  25445117 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagcttatcaagctttacacatgaacaaaccctagag-ctaccctttggtattttccc 25445019  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 188  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||| || |||||| ||||| ||| || |||||    
T  25445018 actctcacactatgaaccctaaatcccaaggtgattacaatgtttttccc-aacctaagaaactctctcatcaaaggcacacaccccat 25444931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 1055039 - 1054854
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||| |||||| ||||||  ||||||||||||||||||||    
T  1055039 ccaatccaatatgtgaa-gtgttacaaaaggttacaagactctagcttatcaagctttacacatgaacaaaccctagaa-ctaccctttggtattttccc 1054942  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 188  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| |||| || |||||| ||||| ||| || |||||    
T  1054941 actctcacactatgaacccaaaatcccaaggtgattacaatgtttttccc-aacctaagaaactctctcatcaaaggcacacaccccat 1054854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 39445557 - 39445742
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||| |||||| ||||||  ||||||||||||||||||||    
T  39445557 ccaatccaatatgtgaa-gtgttacaaaaggttacaagactctagcttatcaagctttacacatgaacaaaccctagaa-ctaccctttggtattttccc 39445654  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 188  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| |||| || |||||| ||||| ||| || |||||    
T  39445655 actctcacactatgaacccaaaatcccaaggtgattacaatgtttttccc-aacctaagaaactctctcatcaaaggcacacaccccat 39445742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 44023901 - 44023716
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||| |||||| ||||||  ||||||||||||||||||||    
T  44023901 ccaatccaatatgtgaa-gtgttacaaaaggttacaagactctagcttgtcaagctttacacatgaacaaaccctagaa-ctaccctttggtattttccc 44023804  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 188  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| |||| || |||||| ||||| ||| || |||||    
T  44023803 actctcacactatgaacccaaaatcccaaggtgattacaatgtttttccc-aacctaagaaactctctcatcaaaggcacacaccccat 44023716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 49 - 188
Target Start/End: Complemental strand, 25439875 - 25439738
Alignment:
Q  49 tcaagctttacacataaacaaagcctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcc 148  Q
    ||||||||||||||| |||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25439875 tcaagctttacacatgaacaaaccctagag-ctaccctttggtattttcccactctcacactatgaaccctaaatcccaaggtgattacaatgtttttcc 25439777  T
Q  149 caaacccaagagacactctcaacaaagacactcaacccat 188  Q
    | |||| |||| || |||||| ||||| ||| || |||||    
T  25439776 c-aacctaagaaactctctcatcaaaggcacacaccccat 25439738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 24787404 - 24787280
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    |||||||||||||||||||||||||||| ||||||||||  |  |||||||||||| |||||||  |||||| |||||||||||||||||||| ||| ||    
T  24787404 ccaatccaatatgagaaagtgttacaaagggttacaagaaacaatagccttcaagcattacacaagaacaaatcctagattctaccctttggtgtttccc 24787305  T
Q  99 cactctcacactatgaaccctaaaa 123  Q
     ||||||||| ||||||||||||||    
T  24787304 aactctcacaatatgaaccctaaaa 24787280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 24787226 - 24787148
Alignment:
Q  124 cccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 204  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24787226 cccaaggtgattataatgtttttcccaa-cccaagagacactctcaacaaagacactcaaccc-tttggttccctcctttg 24787148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 43988492 - 43988314
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataa--acaaagcctagattctaccctttggtatttt 96  Q
    ||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||  |  | ||| ||||||| ||||||||||| |||||    
T  43988492 ccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaaaaaaccctagat-ctaccctttggcatttt 43988394  T
Q  97 cccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 175  Q
    ||||  ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  43988393 cccatcctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 43988314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 24202635 - 24202573
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 186  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  24202635 acccaaggtgattacaatgtttttcccaa-cccaagagacactctctacaaagacactcaaccc 24202573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 24202809 - 24202686
Alignment:
Q  1 ccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagccttcaagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    |||||||| ||||| |||||||||||||| ||||||||||    |||| | ||||||| |||||  |||||  |||||||||||||| || || ||| ||    
T  24202809 ccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagctt-acacaagaacaagacctagattctacccatttgtgtttccc 24202711  T
Q  99 cactctcacactatgaaccctaaaa 123  Q
    |||||||||| ||||||||||||||    
T  24202710 cactctcacaatatgaaccctaaaa 24202686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 19366174 - 19366112
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 186  Q
    |||||||||| ||||||| |||||||||| |||||||||  ||| | |||||||||||||||||    
T  19366174 acccaaggtgtttacaatatttttcccaa-cccaagagatcctcactacaaagacactcaaccc 19366112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 19361298 - 19361237
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 186  Q
    |||||||||| |||||||||||| ||  |||||||||||  ||| | |||||||||||||||||    
T  19361298 acccaaggtgtttacaatgttttccc--aacccaagagatcctcactacaaagacactcaaccc 19361237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 186; Significance: 1e-101; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 15044743 - 15044947
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  15044743 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagctttacacatgaacaaaccctagattctaccctttggtattttccca 15044842  T
Q  101 ctctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15044843 ctctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccca-ttggttccctcc 15044941  T
Q  201 tttgct 206  Q
    ||||||    
T  15044942 tttgct 15044947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 1457190 - 1456986
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| |||    
T  1457190 ccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctagattctaccctttggtgtttcccc 1457091  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctc 199  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1457090 actctcacaatatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca-ttggttccctc 1456993  T
Q  200 ctttgct 206  Q
    |||||||    
T  1456992 ctttgct 1456986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 27445027 - 27445231
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| |||    
T  27445027 ccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctagattctaccctttggtgtttcccc 27445126  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctc 199  Q
    ||||||  | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27445127 actctcttaatatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca-ttggttccctc 27445224  T
Q  200 ctttgct 206  Q
    |||||||    
T  27445225 ctttgct 27445231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 27449871 - 27450075
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| |||    
T  27449871 ccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctagattctaccctttggtgtttcccc 27449970  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctc 199  Q
    ||||||  | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27449971 actctcttaatatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca-ttggttccctc 27450068  T
Q  200 ctttgct 206  Q
    |||||||    
T  27450069 ctttgct 27450075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 43592336 - 43592540
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| |||    
T  43592336 ccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctagattctaccctttggtgtttcccc 43592435  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctc 199  Q
    ||||||  | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43592436 actctcttaatatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca-ttggttccctc 43592533  T
Q  200 ctttgct 206  Q
    |||||||    
T  43592534 ctttgct 43592540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 43598781 - 43598985
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| |||    
T  43598781 ccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctagattctaccctttggtgtttcccc 43598880  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctc 199  Q
    ||||||  | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43598881 actctcttaatatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca-ttggttccctc 43598978  T
Q  200 ctttgct 206  Q
    |||||||    
T  43598979 ctttgct 43598985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 43604273 - 43604477
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| |||    
T  43604273 ccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctagattctaccctttggtgtttcccc 43604372  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctc 199  Q
    ||||||  | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43604373 actctcttaatatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca-ttggttccctc 43604470  T
Q  200 ctttgct 206  Q
    |||||||    
T  43604471 ctttgct 43604477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 43609765 - 43609969
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| |||    
T  43609765 ccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctagattctaccctttggtgtttcccc 43609864  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctc 199  Q
    ||||||  | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43609865 actctcttaatatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca-ttggttccctc 43609962  T
Q  200 ctttgct 206  Q
    |||||||    
T  43609963 ctttgct 43609969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 28807600 - 28807429
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccca 100  Q
    ||||||||||||| ||| ||||||||||||||||||||| |||||| |||||||||||||||| |||||| ||||||| |||||||||||||||||||||    
T  28807600 ccaatccaatatgtgaa-gtgttacaaaaggttacaagaatctagctttcaagctttacacatgaacaaaccctagat-ctaccctttggtattttccca 28807503  T
Q  101 ctctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaag 175  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||| |||| |||| ||||||||| |||||    
T  28807502 ctctcacactatgaacccaaaatcccaaggtgattacaatgtttttccc-aacctaagaaacactctcatcaaag 28807429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 37556650 - 37556506
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    ||||||||||||| ||||||||||||||||||||||||  |||||| | ||||||||||||||| |||||| ||||||  ||||||||||||||||||||    
T  37556650 ccaatccaatatgtgaaagtgttacaaaaggttacaagtatctagcttatcaagctttacacatgaacaaaccctagaa-ctaccctttggtattttccc 37556552  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttt 145  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  37556551 actctcacactatgaacccaaaatcccaaggtgattacaatgtttt 37556506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 37561472 - 37561328
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    ||||||||||||| ||||||||||||||||||||||||  |||||| | ||||||||||||||| |||||| ||||||  ||||||||||||||||||||    
T  37561472 ccaatccaatatgtgaaagtgttacaaaaggttacaagtatctagcttatcaagctttacacatgaacaaaccctagaa-ctaccctttggtattttccc 37561374  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttt 145  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  37561373 actctcacactatgaacccaaaatcccaaggtgattacaatgtttt 37561328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 30631463 - 30631586
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaaga--ctctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    |||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||| |||||| | |||||||||||||||||| ||| ||    
T  30631463 ccaatccaatatgagaaagtgttacaaagggttacaagaaactctagccttcaagctttacacatgaacaaaccatagattctaccctttggtgtttccc 30631562  T
Q  99 cactctcacactatgaaccctaaa 122  Q
    |||||||||| |||||||||||||    
T  30631563 cactctcacaatatgaaccctaaa 30631586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 33791373 - 33791549
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcctt-caagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    ||||||||||||| ||| |||||||||||| ||||||||| |||||| || |||||||||||||| |||||| ||||||  |||||||||||||||||||    
T  33791373 ccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagctttacacatgaacaaaccctagac-ctaccctttggtattttcc 33791471  T
Q  99 cactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 175  Q
    ||| ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  33791472 caccctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 33791549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 2785432 - 2785608
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcctt-caagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    ||||||||||||| ||| |||||||||||| ||||||||| |||||| || |||||||||| ||| |||||| ||||||  |||||||||||||||||||    
T  2785432 ccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagctttactcatgaacaaaccctagac-ctaccctttggtattttcc 2785530  T
Q  99 cactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 175  Q
    ||| ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  2785531 caccctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 2785608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 31180271 - 31180394
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaaga--ctctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    |||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||| | ||||| |||||||||||||||||||| ||| ||    
T  31180271 ccaatccaatatgagaaagtgttacaaagggttacaagaaactctagccttcaagctttacaca-agacaaaccctagattctaccctttggtgtttccc 31180369  T
Q  99 cactctcacactatgaaccctaaaa 123  Q
    |||||||||| |||||||| |||||    
T  31180370 cactctcacaatatgaaccataaaa 31180394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 30631640 - 30631719
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 204  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30631640 acccaaggtgattacaatgtttttcccaa-cccaagagacactctcaacaaagacactcaaccca-ttggttccctcctttg 30631719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 31180447 - 31180526
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 204  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31180447 acccaaggtgattacaatgtttttcccaa-cccaagagacactctcaacaaagacactcaaccc-tttggttccctcctttg 31180526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 31397021 - 31396843
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataa--acaaagcctagattctaccctttggtatttt 96  Q
    ||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||  |  | ||| ||||||| ||||||||||| |||||    
T  31397021 ccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaaaaaaccctagat-ctaccctttggcatttt 31396923  T
Q  97 cccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 175  Q
    ||||  ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  31396922 cccatcctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 31396843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 24136080 - 24136159
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 204  Q
    ||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||| |||||||||||||||||    
T  24136080 acccaaggtgattacaatgtttttccc-aacccaagagacactttctacaaagacactcaaccc-tttggttccctcctttg 24136159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 31401878 - 31401700
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataa--acaaagcctagattctaccctttggtatttt 96  Q
    ||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||  |  | |||  |||||| ||||||||||| |||||    
T  31401878 ccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaaaaaactctagat-ctaccctttggcatttt 31401780  T
Q  97 cccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 175  Q
    ||||  ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  31401779 cccatcctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 31401700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 33768236 - 33768417
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaag-gttacaagactctagc-cttcaagctttacacataaacaaagcctagattctacccttt--ggtatttt 96  Q
    ||||||||||||| ||| |||||||||||| ||||||||| ||||||  |||||||||||||||| |||||| ||||||  |||||||||  | ||||||    
T  33768236 ccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagctttacacatgaacaaaccctaga-cctaccctttcggttatttt 33768334  T
Q  97 ccc-actc--tcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 175  Q
    ||| || |   |||||||||||||   || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  33768335 ccctacccctccacactatgaaccaataatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 33768417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 35387893 - 35387955
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 186  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||| |||||||||||||||||    
T  35387893 acccaaggtgattacaatgttttttccaa-cccaagagaccctctctacaaagacactcaaccc 35387955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 24135920 - 24136028
Alignment:
Q  15 gaaagtgttacaaaaggttacaagactc-tagccttcaagctttacacataaacaaagcctagattctaccctttggtattttcccactctcacactatg 113  Q
    |||||||||||||| ||||||||||    |||| | ||||||| |||||  |||||  |||||||||||||||||||| ||| |||||||||||| | ||    
T  24135920 gaaagtgttacaaagggttacaagaaaaatagcttgcaagctt-acacaagaacaagtcctagattctaccctttggtgtttccccactctcacaatgtg 24136018  T
Q  114 aaccctaaaa 123  Q
    ||||||||||    
T  24136019 aaccctaaaa 24136028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 38219629 - 38219691
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 186  Q
    |||||||||| |||||||||||||||| |||||||||||  ||| | |||||||||||||||||    
T  38219629 acccaaggtgtttacaatgtttttccc-aacccaagagatcctcactacaaagacactcaaccc 38219691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 182; Significance: 1e-98; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 39812016 - 39811812
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  39812016 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttccca 39811917  T
Q  101 ctctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  39811916 ctctcacactatgaaccctaaaacccaaggtgattacaatgtttttctc-aacctaagagacactctcaacaaagacactcaacccatttggttccctcc 39811818  T
Q  201 tttgct 206  Q
    ||||||    
T  39811817 tttgct 39811812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 32246845 - 32247031
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  32246845 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagctttacacatgaacaaaccctagattataccctttggtattttccca 32246944  T
Q  101 ctctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 188  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||| ||||||||| ||||| ||| || |||||    
T  32246945 ctctcacactatgaaccctaaatcccaaggtgattacaatgtttttccc-aacctaagaaacactctcatcaaaggcacacaccccat 32247031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 19344478 - 19344655
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcctt-caagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    ||||||||||||| ||| |||||||||||| ||||||||| |||||| || |||||||||||||| |||||| ||||||  |||||||||||||||||||    
T  19344478 ccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagctttacacatgaacaaaccctagac-ctaccctttggtattttcc 19344576  T
Q  99 cactctcacactatgaaccctaaaacccaaggtgattacaatgt--ttttcccaaacccaagagacactctcaacaaag 175  Q
    ||| ||||||||||||||||  || |||||||||||||||||||  |||| || |||| |||| ||||||||| |||||    
T  19344577 caccctcacactatgaacccataatcccaaggtgattacaatgttgtttttcccaacctaagaaacactctcatcaaag 19344655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 19349336 - 19349513
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcctt-caagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    ||||||||||||| ||| |||||||||||| ||||||||| |||||| || |||||||||||||| |||||| ||||||  |||||||||||||||||||    
T  19349336 ccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagctttacacatgaacaaaccctagac-ctaccctttggtattttcc 19349434  T
Q  99 cactctcacactatgaaccctaaaacccaaggtgattacaatgt--ttttcccaaacccaagagacactctcaacaaag 175  Q
    ||| ||||||||||||||||  || |||||||||||||||||||  |||| || |||| |||| ||||||||| |||||    
T  19349435 caccctcacactatgaacccataatcccaaggtgattacaatgttgtttttcccaacctaagaaacactctcatcaaag 19349513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 44312652 - 44312563
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctaccctttg 89  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  44312652 ccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctagattctaccctttg 44312563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 11098790 - 11098711
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 204  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  11098790 acccaaggtgattacaatgtttttcccaa-cccaagagacactctctacaaagacactcaaccc-tttggttccctcctttg 11098711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 11098967 - 11098843
Alignment:
Q  1 ccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccctttggtattttc 97  Q
    |||||||||||||| |||||||||||||| ||||||||||  |  |||| | ||||||| |||||  |||||| |||||||||||||||||||| ||| |    
T  11098967 ccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcttgcaagctt-acacaagaacaaaccctagattctaccctttggtgtttcc 11098869  T
Q  98 ccactctcacactatgaaccctaaaa 123  Q
    ||||||||||| ||||||||||||||    
T  11098868 ccactctcacaatatgaaccctaaaa 11098843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 9296265 - 9296186
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 204  Q
    ||||||||||||||||||||||||||| ||||||| ||||||| || ||||||||||||||||| |||||||||||||||||    
T  9296265 acccaaggtgattacaatgtttttccc-aacccaatagacactttctacaaagacactcaaccc-tttggttccctcctttg 9296186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 14291722 - 14291801
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 204  Q
    ||||||||||||||||||||||||||| ||||||||||||||| || |||||||| |||||||| |||||||||||||||||    
T  14291722 acccaaggtgattacaatgtttttccc-aacccaagagacactatctacaaagacgctcaaccc-tttggttccctcctttg 14291801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 14291545 - 14291669
Alignment:
Q  1 ccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccctttggtattttc 97  Q
    |||||||||||||| |||||||||||||| ||||||||||  |  |||||||||||||| |||||  |||||  |||||||||||||| |  || ||| |    
T  14291545 ccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctacccatatgtgtttcc 14291643  T
Q  98 ccactctcacactatgaaccctaaaa 123  Q
    ||||||||||| ||||||||||||||    
T  14291644 ccactctcacaatatgaaccctaaaa 14291669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 9296441 - 9296317
Alignment:
Q  1 ccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccctttggtattttc 97  Q
    |||||||||||||| |||||||||||||| ||||||||||  |  |||||||||||||| | |||  |||||  |||||||||||||| |  || ||| |    
T  9296441 ccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-atacaagaacaagccctagattctacccatatgtgtttcc 9296343  T
Q  98 ccactctcacactatgaaccctaaaa 123  Q
    ||||||||||| ||||||||||||||    
T  9296342 ccactctcacaatatgaaccctaaaa 9296317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 25409860 - 25409922
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 186  Q
    |||||||||| |||||||||||||||| |||||||||||  ||||| |||||||||||||||||    
T  25409860 acccaaggtgtttacaatgtttttccc-aacccaagagatcctctctacaaagacactcaaccc 25409922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 3491807 - 3491930
Alignment:
Q  1 ccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagccttcaagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    |||||||| ||||| |||||||||||||| ||||||||||    |||| | ||||||| |||||  |||||  |||||||||||||| || || ||| ||    
T  3491807 ccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagctt-acacaagaacaagacctagattctacccatttgtgtttccc 3491905  T
Q  99 cactctcacactatgaaccctaaaa 123  Q
    |||||||||| ||||||||||||||    
T  3491906 cactctcacaatatgaaccctaaaa 3491930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 3491981 - 3492043
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 186  Q
    |||||||||| ||||||||||||| || |||||||||||  ||| | |||||||||||||||||    
T  3491981 acccaaggtgtttacaatgttttttcc-aacccaagagatcctcactacaaagacactcaaccc 3492043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 178; Significance: 4e-96; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 31109611 - 31109407
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||| ||||||||||    
T  31109611 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttgcacatgaacaaaccctagattctaccctttgatattttccca 31109512  T
Q  101 ctctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31109511 ctctcacactatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaacccatatggttccctcc 31109413  T
Q  201 tttgct 206  Q
    ||||||    
T  31109412 tttgct 31109407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 24024354 - 24024151
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccca 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  24024354 ccaatccaatatgagaaagtgttacaaaatgttacaagactctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttccca 24024255  T
Q  101 ctctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcc 200  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24024254 ctctcacacgatgaaccctaaaacccacggtgattacaatgttttt-ccaaacccaagagacactctcaacaaagacactcaaccca-ttggttccctcc 24024157  T
Q  201 tttgct 206  Q
    ||||||    
T  24024156 tttgct 24024151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 12406388 - 12406585
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| |||    
T  12406388 ccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctagattctaccctttggtgtttcccc 12406487  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctc 199  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12406488 actctcacaatatgaaccctaaaagccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca-ttggttccctc 12406585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 12396968 - 12397172
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||| |||||||||||||||||||| ||| |||    
T  12396968 ccaatccaatatgagaaagtgttacaaaaggttacaagaactctagcctttaatctttacacatgaacaaaccctagattctaccctttggtgtttcccc 12397067  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctc 199  Q
    ||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12397068 actatcacaatatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca-ttggttccctc 12397165  T
Q  200 ctttgct 206  Q
    |||||||    
T  12397166 ctttgct 12397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 19992370 - 19992544
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||| |||||| ||||||  ||||||||||||||||||||    
T  19992370 ccaatccaatatgtgaaagtgttacaaaaggttacaagactctagcttatcaagctttacacatgaacaaaccctagaa-ctaccctttggtattttccc 19992468  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaag 175  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| |||| |||||| || |||||    
T  19992469 actctcacactatgaacccaaaatcccaaggtgattacaatgtttttccccaacctaagaaacactcacatcaaag 19992544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 21812266 - 21812092
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaa-gctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    ||||||||||||| ||| || |||||||||||| |||||||||||| | |||| ||||||||||| |||||| ||||||| |||||||||||||||||||    
T  21812266 ccaatccaatatgtgaa-gtcttacaaaaggttccaagactctagcttgtcaaagctttacacatgaacaaaccctagat-ctaccctttggtattttcc 21812169  T
Q  99 cactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaag 175  Q
    ||||||||||||||||||||  || |||||||||||||||||||||||||| |||| |||| ||||||||| |||||    
T  21812168 cactctcacactatgaacccataatcccaaggtgattacaatgtttttccccaacctaagaaacactctcatcaaag 21812092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 20357410 - 20357331
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 204  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20357410 acccaaggtgattacaatgtttttcccaa-cccaagagacactctcaacaaagacactcaaccc-tttggttccctcctttg 20357331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 4873310 - 4873387
Alignment:
Q  125 ccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 204  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4873310 ccaaggtgattacaatgtttttcccaa-cccaagagacactctcaacaaagacactcaaccca-ttggttccctcctttg 4873387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 1533307 - 1533228
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 204  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  1533307 acccaaggtgattacaatgtttttcccaa-cccaagagacactctctacaaagacactcaaccc-tttggttccctcctttg 1533228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 2058202 - 2058281
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 204  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  2058202 acccaaggtgattacaatgtttttcccaa-cccaagagacactctctacaaagacactcaaccc-tttggttccctcctttg 2058281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 24266230 - 24266054
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    ||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||  |  ||| ||||||  ||||||||||||| |||||    
T  24266230 ccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaaaaccctagac-ctaccctttggtaatttcc 24266132  T
Q  99 cactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 175  Q
    ||  ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  24266131 caacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 24266054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 20357587 - 20357463
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    |||||||||||||||||||||||||||| ||||||||||  |  ||||||||||||||||||||  ||||   |||||||||||||| |  || ||| ||    
T  20357587 ccaatccaatatgagaaagtgttacaaagggttacaagaaacaatagccttcaagctttacacaagaacatgccctagattctacccatatgtgtttccc 20357488  T
Q  99 cactctcacactatgaaccctaaaa 123  Q
    |||||||||| ||||||||||||||    
T  20357487 cactctcacaatatgaaccctaaaa 20357463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 24261351 - 24261175
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    ||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||  |  ||| ||||||  ||||||||||||| |||||    
T  24261351 ccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaaaaccctagac-ctaccctttggtaatttcc 24261253  T
Q  99 cactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 175  Q
    ||  ||||||||||||||||  || |||||| ||||||||||||| ||| || |||| ||||  |||||||| |||||    
T  24261252 caacctcacactatgaacccataatcccaagatgattacaatgttgttttcccaacctaagattcactctcatcaaag 24261175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 1533484 - 1533359
Alignment:
Q  1 ccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacat-aaacaaagcctagattctaccctttggtatttt 96  Q
    |||||||||||||| |||||||||||||| ||||||||||  |  |||| | ||||||| |||||  ||||||  |||||||||||||||||||| ||||    
T  1533484 ccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcttgcaagctt-acacaagaaacaagacctagattctaccctttggtgtttt 1533386  T
Q  97 cccactctcacactatgaaccctaaaa 123  Q
    |||||||||||| ||||||||||||||    
T  1533385 cccactctcacaatatgaaccctaaaa 1533359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 2058022 - 2058147
Alignment:
Q  1 ccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccctt-tggtatttt 96  Q
    |||||||||||||| |||||||||||||| ||||||||||  |  |||| ||||||||| |||||  |||||  |||||||||||||| | || | |||     
T  2058022 ccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcattcaagctt-acacaagaacaagccctagattctacccatatgttgtttc 2058120  T
Q  97 cccactctcacactatgaaccctaaaa 123  Q
    |||||||||||| ||||||||||||||    
T  2058121 cccactctcacaatatgaaccctaaaa 2058147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 21640039 - 21640101
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 186  Q
    |||||||||| |||||||||||||||| |||||||||||  ||||| |||||||||||||||||    
T  21640039 acccaaggtgtttacaatgtttttccc-aacccaagagatcctctctacaaagacactcaaccc 21640101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 21646237 - 21646299
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 186  Q
    |||||||||| |||||||||||||||| |||||||||||  ||||| |||||||||||||||||    
T  21646237 acccaaggtgtttacaatgtttttccc-aacccaagagatcctctctacaaagacactcaaccc 21646299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 18408993 - 18409055
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 186  Q
    |||||||||| |||||||||||||||| |||||||||||  ||| | |||||||||||||||||    
T  18408993 acccaaggtgtttacaatgtttttccc-aacccaagagatcctcactacaaagacactcaaccc 18409055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 4866787 - 4866820
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggtta 34  Q
    ||||||||||||||||||||||||||||||||||    
T  4866787 ccaatccaatatgagaaagtgttacaaaaggtta 4866820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 21639880 - 21639988
Alignment:
Q  15 gaaagtgttacaaaaggttacaagactc-tagccttcaagctttacacataaacaaagcctagattctaccctttggtattttcccactctcacactatg 113  Q
    |||||||||||||| ||||||||||    |||| | ||||||| |||||  |||||  |||||||||||||| || || ||| |||||||||||| ||||    
T  21639880 gaaagtgttacaaagggttacaagaaaaatagcttgcaagctt-acacaagaacaagacctagattctacccatttgtgtttccccactctcacaatatg 21639978  T
Q  114 aaccctaaaa 123  Q
    ||||||||||    
T  21639979 aaccctaaaa 21639988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 21646063 - 21646186
Alignment:
Q  1 ccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagccttcaagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    |||||||| ||||| |||||||||| ||| ||||||||||    |||| | ||||||| |||||  |||||  |||||||||||||| || || ||| ||    
T  21646063 ccaatccactatgatgaaagtgttaaaaagggttacaagaaaaatagcttgcaagctt-acacaagaacaagacctagattctacccatttgtgtttccc 21646161  T
Q  99 cactctcacactatgaaccctaaaa 123  Q
    |||||||||| ||||||||||||||    
T  21646162 cactctcacaatatgaaccctaaaa 21646186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 18413869 - 18413931
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 186  Q
    |||||||||| ||||| |||||||||| |||||||||||  ||| | |||||||||||||||||    
T  18413869 acccaaggtgtttacattgtttttccc-aacccaagagatcctcactacaaagacactcaaccc 18413931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 176; Significance: 6e-95; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 14737604 - 14737403
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||    
T  14737604 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacatatgaacaaaccctagattctaccctttggtattttccca 14737505  T
Q  101 ctctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14737504 ctctcacactatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca-ttggttccctcc 14737407  T
Q  201 tttg 204  Q
    ||||    
T  14737406 tttg 14737403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 14742464 - 14742263
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||    
T  14742464 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacatatgaacaaaccctagattctaccctttggtattttccca 14742365  T
Q  101 ctctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcc 200  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  14742364 ctctcacactatgaaccctaaaacccaaagtgattacaatgtttttccc-aacccaagagacactctcaacaaagacacttaaccca-ttggttccctcc 14742267  T
Q  201 tttg 204  Q
    ||||    
T  14742266 tttg 14742263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 11857031 - 11857235
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| |||    
T  11857031 ccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctagattctaccctttggtgtttcccc 11857130  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctc 199  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11857131 actctcacaatatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca-ttggttccctc 11857228  T
Q  200 ctttgct 206  Q
    |||||||    
T  11857229 ctttgct 11857235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 22010725 - 22010521
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||| ||||| |||    
T  22010725 ccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctagattctaccctttgatatttcccc 22010626  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctc 199  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22010625 actctcacaatatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca-ttggttccctc 22010528  T
Q  200 ctttgct 206  Q
    |||||||    
T  22010527 ctttgct 22010521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 28184562 - 28184754
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccca 100  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  28184562 ccaatctaatatgagaaagtgttacaaaaggttacaacactctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttccca 28184661  T
Q  101 ctctcacactatgaaccctaaaacccaaggtgattacaatg--tttttcccaaacccaagagacactctcaacaaagacactcaacccatttg 191  Q
    ||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28184662 ctctcacactatgaaccctaaaacccaaggtgattactatgtttttttcccaaacccaagagacactctcaacaaagaccctcaacccatttg 28184754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 28155597 - 28155412
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccca 100  Q
    ||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||| |||||| ||||||| |||||||||||||||||||||    
T  28155597 ccaatccaatatgagaaagtgttacaaaaggttacaagaatttagctttcaagctttacacatgaacaaaccctagat-ctaccctttggtattttccca 28155499  T
Q  101 ctctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 188  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||| ||||||||| ||||| ||| || |||||    
T  28155498 ctctcacactatgaaccctaaatcccaaggtgattacaatgtttttccc-aacctaagaaacactctcatcaaaggcacacaccccat 28155412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 6438558 - 6438743
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||| |||||| ||||||  ||||||||||||||||||||    
T  6438558 ccaatccaatatgtgaa-gtgttacaaaaggttacaagactctagcttgtcaagctttacacatgaacaaaccctagaa-ctaccctttggtattttccc 6438655  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 188  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| |||| || |||||| ||||| ||| || |||||    
T  6438656 actctcacactatgaacccaaaatcccaaggtgattacaatgtttttccc-aacctaagaaactctctcatcaaaggcacacaccccat 6438743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 16838801 - 16838977
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcc-ttcaagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    ||||||||||||| ||| |||||||||||| ||||||||| ||||||  |||||||||||||||| |||||| ||||||| |||||||||||||||||||    
T  16838801 ccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagctattcaagctttacacatgaacaaaccctagat-ctaccctttggtattttcc 16838899  T
Q  99 cactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 175  Q
    ||  |||||||||||||||||||| |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  16838900 catcctcacactatgaaccctaaatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 16838977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 6005474 - 6005650
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcctt-caagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    ||||||||||||| ||| |||||||||||| ||||||||| |||||| || |||||||||||||| |||||| ||||||  |||||||||||||||||||    
T  6005474 ccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagctttacacatgaacaaaccctagac-ctaccctttggtattttcc 6005572  T
Q  99 cactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 175  Q
    ||| ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  6005573 caccctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 6005650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 33330473 - 33330297
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    ||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||| |  ||| ||||||| |||||||||||||||||||    
T  33330473 ccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacatgacaaaaccctagat-ctaccctttggtattttcc 33330375  T
Q  99 cactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 175  Q
    ||  |||||||||||||||||||| |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  33330374 catcctcacactatgaaccctaaatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 33330297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 33335970 - 33335794
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    ||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||| |  ||| ||||||| |||||||||||||||||||    
T  33335970 ccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacatgacaaaaccctagat-ctaccctttggtattttcc 33335872  T
Q  99 cactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 175  Q
    ||  |||||||||||||||||||| |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  33335871 catcctcacactatgaaccctaaatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 33335794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 5674633 - 5674554
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 204  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  5674633 acccaaggtgattacaatgtttttcccaa-cccaagagacactctctacaaagacactcaaccc-tttggttccctcctttg 5674554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 5674810 - 5674685
Alignment:
Q  1 ccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacat-aaacaaagcctagattctaccctttggtatttt 96  Q
    |||||||||||||| |||||||||||||| ||||||||||  |  |||| | ||||||| |||||  ||||||  |||||||||||||||||||| |||     
T  5674810 ccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcttgcaagctt-acacaagaaacaagacctagattctaccctttggtgtttc 5674712  T
Q  97 cccactctcacactatgaaccctaaaa 123  Q
    |||||||||||| ||||||||||||||    
T  5674711 cccactctcacaatatgaaccctaaaa 5674685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 5343628 - 5343710
Alignment:
Q  94 tttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 175  Q
    |||||||  ||||||||||||||||  || |||||||||||||||||||| ||| || |||| ||||  |||||||| |||||    
T  5343628 tttcccaacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagattcactctcatcaaag 5343710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 159; Significance: 8e-85; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 35090 - 34886
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||| |||||| ||||||||||||| ||| |||    
T  35090 ccaatccaatatgagaaagtgttacaaaaggttagaagaactctagccttcaagctttacacatgaacaaaccctagactctaccctttggtgtttcccc 34991  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctc 199  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34990 actctcacactatgaaccctaaaacccaaggtgattacaatg-ttttcccaaacccaagagacactctcaacaaagacactcaaccca-ttggttccctc 34893  T
Q  200 ctttgct 206  Q
    |||||||    
T  34892 ctttgct 34886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 159; Significance: 8e-85; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 7289954 - 7289750
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||| ||||||||||||||| ||| |||    
T  7289954 ccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctatattctaccctttggtgtttcccc 7289855  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctc 199  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7289854 actctcacaatatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca-ttggttccctc 7289757  T
Q  200 ctttgct 206  Q
    |||||||    
T  7289756 ctttgct 7289750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 25328306 - 25328120
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| ||||    
T  25328306 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaaccctagattctaccctttggtgtttcccca 25328207  T
Q  101 ctctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 188  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  25328206 ctctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcatcaaagacacacaacccat 25328120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 39784850 - 39784665
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||| |||||| ||||||  ||||||||||||||||||||    
T  39784850 ccaatccaatatgtgaa-gtgttacaaaaggttacaagactctagcttatcaagctttacacatgaacaaaccctagaa-ctaccctttggtattttccc 39784753  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 188  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||||| |||||| ||||| ||| || |||||    
T  39784752 actctcacactatgaacccaaaatcccaaggtgattacaatgtttttccc-aacctaagagactctctcatcaaaggcacacaccccat 39784665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 6311354 - 6311477
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaag--actctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| | ||||| |||||||||||||||||||| ||| ||    
T  6311354 ccaatccaatatgagaaagtgttacaaaaggttacaagaaactctagccttcaagctttacaca-agacaaaccctagattctaccctttggtgtttccc 6311452  T
Q  99 cactctcacactatgaaccctaaaa 123  Q
    ||||||||||  |||||||||||||    
T  6311453 cactctcacaagatgaaccctaaaa 6311477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 35745448 - 35745624
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcctt-caagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    ||||||||||||| ||| |||||||||||| ||||||||| |||||| || |||||||||||||| |||||| ||||||  |||||||||||||||||||    
T  35745448 ccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagctttacacatgaacaaaccctagac-ctaccctttggtattttcc 35745546  T
Q  99 cactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 175  Q
    ||| ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  35745547 caccctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 35745624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 123 - 206
Target Start/End: Original strand, 6311532 - 6311613
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttgct 206  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6311532 acccaaggtgattacaatgtttttcccaa-cccaagagacactctcaacaaagacactcaaccc-tttggttccctcctttgct 6311613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 18870424 - 18870345
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 204  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18870424 acccaaggtgattacaatgtttttcccaa-cccaagagacactctcaacaaagacactcaaccc-tttggttccctcctttg 18870345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 30655880 - 30655959
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 204  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30655880 acccaaggtgattacaatgtttttcccaa-cccaagagacactctcaacaaagacactcaaccc-tttggttccctcctttg 30655959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 36979434 - 36979558
Alignment:
Q  1 ccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccctttggtattttc 97  Q
    |||||||||||||| |||||||||||||| ||||||||||  |  |||||||||||||| |||||  |||||| |||||||||||||||||||| ||| |    
T  36979434 ccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaaaccctagattctaccctttggtgtttcc 36979532  T
Q  98 ccactctcacactatgaaccctaaaa 123  Q
    ||||||||||| ||||||||||||||    
T  36979533 ccactctcacaatatgaaccctaaaa 36979558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 10684292 - 10684116
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    ||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||  |  ||| ||||||  ||||||||||||| |||||    
T  10684292 ccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaaaaccctagac-ctaccctttggtaatttcc 10684194  T
Q  99 cactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 175  Q
    ||  ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  10684193 caacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 10684116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 10689003 - 10688924
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 204  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  10689003 acccaaggtgattacaatgtttttcccaa-cccaagagacactctctacaaagacactcaaccc-tttggttccctcctttg 10688924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 18853030 - 18852951
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 204  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18853030 acccaaggtgattacaatatttttcccaa-cccaagagacactctcaacaaagacactcaaccc-tttggttccctcctttg 18852951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 111 - 188
Target Start/End: Complemental strand, 25328070 - 25327994
Alignment:
Q  111 atgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 188  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  25328070 atgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcatcaaagacacacaacccat 25327994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 30655703 - 30655827
Alignment:
Q  1 ccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccctttggtattttc 97  Q
    |||||| ||||||| |||||||||||||| ||||||||||  |  |||||||||||||| |||||  |||||| |||||||||||||||||||| ||| |    
T  30655703 ccaatctaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaaaccctagattctaccctttggtgtttcc 30655801  T
Q  98 ccactctcacactatgaaccctaaaa 123  Q
    ||||||||||| ||||||||||||||    
T  30655802 ccactctcacaatatgaaccctaaaa 30655827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 33037671 - 33037592
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 204  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||| |||||||||||||||||    
T  33037671 acccaaggtgattacaatgtttttccc-aacccaagagacactctctacgaagacactcaaccc-tttggttccctcctttg 33037592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 33037846 - 33037724
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaag--actctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    |||||||||||||||||||||||||||| |||||||||  ||  |||||||||||| |||||||  |||||| |||||||||||||| |  || ||| ||    
T  33037846 ccaatccaatatgagaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaaaccctagattctacccatatgtgtttccc 33037748  T
Q  99 cactctcacactatgaaccctaaa 122  Q
    |||||||||| |||||||||||||    
T  33037747 cactctcacaatatgaaccctaaa 33037724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 18870602 - 18870477
Alignment:
Q  1 ccaatccaatatga-gaaagtgttacaaaagg-ttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccctttggtatttt 96  Q
    |||||||||||| | ||||||||||||||||| ||||||||  |  |||| ||||||||| |||||  |||||| ||||||||||||||||||||||||     
T  18870602 ccaatccaatataatgaaagtgttacaaaagggttacaagaaacaatagcattcaagctt-acacaagaacaaaccctagattctaccctttggtatttc 18870504  T
Q  97 cccactctcacactatgaaccctaaaa 123  Q
    |||||||||||| ||||||||||||||    
T  18870503 cccactctcacaatatgaaccctaaaa 18870477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 4759938 - 4759857
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttgc 205  Q
    |||||||||||||||||||||||| || |||||||||||| ||||| ||||||||||||||||| ||||||| ||||||||||    
T  4759938 acccaaggtgattacaatgttttttcccaacccaagagactctctctacaaagacactcaaccc-tttggttacctcctttgc 4759857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 18853208 - 18853083
Alignment:
Q  1 ccaatccaatatga-gaaagtgttacaaaagg-ttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccctttggtatttt 96  Q
    |||||||||||| | ||||||||||||||||| ||||||||  |  |||| ||||||||| |||||  |||||| |||||||| |||||||||||||||     
T  18853208 ccaatccaatataatgaaagtgttacaaaagggttacaagaaacaatagcattcaagctt-acacaagaacaaaccctagattttaccctttggtatttc 18853110  T
Q  97 cccactctcacactatgaaccctaaaa 123  Q
    |||||||||||| ||||||||||||||    
T  18853109 cccactctcacaatatgaaccctaaaa 18853083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 1261820 - 1261758
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 186  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||    
T  1261820 acccaaggtgattacaatgtttttccc-aacccaagagaccctctctacaaagacactcaaccc 1261758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 4760115 - 4759991
Alignment:
Q  1 ccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccctttggtattttc 97  Q
    |||||||||||||| |||||||||||||| ||||||||||  |  |||||||||||||| |||||  |||||  |||||||||||||| |  || ||| |    
T  4760115 ccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctacccatatgtgtttcc 4760017  T
Q  98 ccactctcacactatgaaccctaaaa 123  Q
    ||||||||||| ||||||||||||||    
T  4760016 ccactctcacaatatgaaccctaaaa 4759991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 36979611 - 36979689
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 204  Q
    ||||||||||||||||||||||| ||  |||| ||||||||||||| ||||||||||||||||| ||||||||||| |||||    
T  36979611 acccaaggtgattacaatgttttccc--aacctaagagacactctctacaaagacactcaaccc-tttggttcccttctttg 36979689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 10689183 - 10689058
Alignment:
Q  1 ccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccctt-tggtatttt 96  Q
    |||||||||||||| |||||||||||| | ||||||||||  |  |||||||||||||| |||||  |||||  |||||||||||||| | || | |||     
T  10689183 ccaatccaatatgatgaaagtgttacagagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctacccatatgttgtttc 10689085  T
Q  97 cccactctcacactatgaaccctaaaa 123  Q
    |||||||||||| ||||||||||||||    
T  10689084 cccactctcacaatatgaaccctaaaa 10689058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 31071095 - 31071035
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaac 184  Q
    |||||||||| |||||||||||||||| |||||||||||  ||| | |||||||||||||||    
T  31071095 acccaaggtgtttacaatgtttttccc-aacccaagagatcctcactacaaagacactcaac 31071035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 1261994 - 1261871
Alignment:
Q  1 ccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagccttcaagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    |||||||| ||||| |||||||||||||| ||||||||||    |||| | ||||||| |||||   ||||  |||||||||||||| || || ||| ||    
T  1261994 ccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagctt-acacaagtacaagacctagattctacccatttgtgtttccc 1261896  T
Q  99 cactctcacactatgaaccctaaaa 123  Q
    |||||||||| ||||||||||||||    
T  1261895 cactctcacaatatgaaccctaaaa 1261871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 26288121 - 26288183
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 186  Q
    |||||||||| |||||||||||||||| ||| |||||||  ||||| ||||||||| |||||||    
T  26288121 acccaaggtgtttacaatgtttttccc-aactcaagagattctctctacaaagacattcaaccc 26288183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 26301378 - 26301440
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 186  Q
    |||||||||| |||||||||||||||| ||| |||||||  ||||| ||||||||| |||||||    
T  26301378 acccaaggtgtttacaatgtttttccc-aactcaagagattctctctacaaagacattcaaccc 26301440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 26313372 - 26313434
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 186  Q
    |||||||||| |||||||||||||||| ||| |||||||  ||||| ||||||||| |||||||    
T  26313372 acccaaggtgtttacaatgtttttccc-aactcaagagattctctctacaaagacattcaaccc 26313434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 7412569 - 7412629
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 186  Q
    |||||||||| |||||||||||   || |||||||||||  ||||| |||||||||||||||||    
T  7412569 acccaaggtgtttacaatgttt---cccaacccaagagatcctctctacaaagacactcaaccc 7412629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 159; Significance: 8e-85; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 9224435 - 9224231
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||| |||||| ||||||||||||| ||| |||    
T  9224435 ccaatccaatatgagaaagtgttacaaaaggttagaagaactctagccttcaagctttacacatgaacaaaccctagactctaccctttggtgtttcccc 9224336  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctc 199  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9224335 actctcacactatgaaccctaaaacccaaggtgattacaatg-ttttcccaaacccaagagacactctcaacaaagacactcaaccca-ttggttccctc 9224238  T
Q  200 ctttgct 206  Q
    |||||||    
T  9224237 ctttgct 9224231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 9229222 - 9229018
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||| |||||| ||||||||||||| ||| |||    
T  9229222 ccaatccaatatgagaaagtgttacaaaaggttagaagaactctagccttcaagctttacacatgaacaaaccctagactctaccctttggtgtttcccc 9229123  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctc 199  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9229122 actctcacactatgaaccctaaaacccaaggtgattacaatg-ttttcccaaacccaagagacactctcaacaaagacactcaaccca-ttggttccctc 9229025  T
Q  200 ctttgct 206  Q
    |||||||    
T  9229024 ctttgct 9229018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 51520514 - 51520715
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| |||    
T  51520514 ccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctagattctaccctttggtgtttcccc 51520613  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctc 199  Q
    ||||||  | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  51520614 actctcttaatatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca-ttggttccctc 51520711  T
Q  200 cttt 203  Q
    ||||    
T  51520712 cttt 51520715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 45347845 - 45347658
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagac-tctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  45347845 ccaatccaatatgagaaagtgttacaaaaggttacaagacctctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttccc 45347746  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 188  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||| ||||| ||| || |||||    
T  45347745 actctcacactatgaaccctaaaccccaaggtgattacaatgtttttccc-aacctaagagacactctcatcaaaggcacacaccccat 45347658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 3814081 - 3814266
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccca 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||| |||||||||||||||||||||    
T  3814081 ccaatccaatatgtgaaagtgttacaaaaggttacaagactctagctttcaagctttacacatgaacaaaccctagat-ctaccctttggtattttccca 3814179  T
Q  101 ctctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||| ||||||||| || |||||    
T  3814180 ctctcacactatgaaccctaaaacccaaggtgattacaatgtttttccc-aacctaagaaacactctcatcaaagacacacaccccat 3814266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 45357324 - 45357138
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  45357324 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagctttacacatgaacaaaccctagattctaccctttggtattttccca 45357225  T
Q  101 ctctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 188  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||| || |||||| ||||| ||| || |||||    
T  45357224 ctctcacactatgaaccctaaaccccaaggtgattacaatgtttttccc-aacctaagaaactctctcatcaaaggcacacaccccat 45357138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 5732722 - 5732907
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||| ||||||||||||||||||||||    
T  5732722 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagctttacacatgaacaaaccctaga-tctaccctttggtattttccca 5732820  T
Q  101 ctctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 188  Q
    |||||||||||| |||||| || |||||||||||||||||||||||||| |||| |||| ||||||||| ||||| ||| || |||||    
T  5732821 ctctcacactataaacccttaatcccaaggtgattacaatgtttttccc-aacctaagaaacactctcatcaaaggcacacaccccat 5732907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 18855784 - 18855933
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||| |||||| ||||||  ||||||||||||||||||||    
T  18855784 ccaatccaatatgtgaa-gtgttacaaaaggttacaagactctagcttatcaagctttacacatgaacaaaccctagaa-ctaccctttggtattttccc 18855881  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaa 151  Q
    |||||||||||||||||||  || ||||||||||||||||||||||||||||    
T  18855882 actctcacactatgaacccacaatcccaaggtgattacaatgtttttcccaa 18855933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 117 - 206
Target Start/End: Complemental strand, 18712677 - 18712590
Alignment:
Q  117 cctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttgct 206  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18712677 cctaaaacccaaggtgataacaatgtttttcccaa-cccaagagacactctcaacaaagacactcaaccca-ttggttccctcctttgct 18712590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 24741997 - 24742121
Alignment:
Q  1 ccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccctttggtattttc 97  Q
    |||||||||||||| |||||||||||||| ||||||||||  |  |||||||||||||| |||||  |||||| |||||||||||||||||||| ||| |    
T  24741997 ccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaaaccctagattctaccctttggtgtttcc 24742095  T
Q  98 ccactctcacactatgaaccctaaaa 123  Q
    ||||||||||| ||||||||||||||    
T  24742096 ccactctcacaatatgaaccctaaaa 24742121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 24742174 - 24742253
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 204  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  24742174 acccaaggtgattacaatgtttttcccaa-cccaagagacactctctacaaagacactcaaccc-tttggttccctcctttg 24742253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 29760874 - 29760954
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 204  Q
    |||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  29760874 acccaaggtgattacaatgttttttcccaacccaagagacactctctacaaagacactcaaccc-tttggttccctcctttg 29760954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 56146739 - 56146664
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaag-actctagccttcaagctttacacataaacaaagccta 75  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||    
T  56146739 ccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaacccta 56146664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 29760698 - 29760821
Alignment:
Q  1 ccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacat-aaacaaagcctagattctaccctttggtatttt 96  Q
    |||||||||||||| |||||||||||||| ||||||||||  |  |||||| ||||||| |||||  ||||||  |||||||||||||||||||| |||     
T  29760698 ccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcctgcaagctt-acacaagaaacaagacctagattctaccctttggtgtttc 29760796  T
Q  97 cccactctcacactatgaaccctaa 121  Q
    |||||||||||||||||||||||||    
T  29760797 cccactctcacactatgaaccctaa 29760821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 151; Significance: 5e-80; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 22173223 - 22173019
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| |||    
T  22173223 ccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctttacacatgaacaaaccctagattctaccctttggtgtttcccc 22173124  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctc 199  Q
    ||||||  | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||     
T  22173123 actctcctaatatgaaccctaaaacccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccca-ttggttcccta 22173026  T
Q  200 ctttgct 206  Q
    |||||||    
T  22173025 ctttgct 22173019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 18656492 - 18656677
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||| ||||||||||||||||||||||    
T  18656492 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagcattcaagctttacacatgaacaaaccctaga-tctaccctttggtattttccca 18656590  T
Q  101 ctctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 188  Q
    |||||||||||| |||||| || |||||||||||||||||||||||||| |||| |||| ||||||||| ||||| ||| || |||||    
T  18656591 ctctcacactataaacccttaatcccaaggtgattacaatgtttttccc-aacctaagaaacactctcatcaaaggcacacaccccat 18656677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 28501737 - 28501613
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaaga--ctctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||  || ||| |||||||||||||||||||| ||| ||    
T  28501737 ccaatccaatatgagaaagtgttacaaaaggttacaagaaactctagccttcaagctttacacaagaataaaccctagattctaccctttggtgtttccc 28501638  T
Q  99 cactctcacactatgaaccctaaaa 123  Q
    |||||||||| ||||||||||||||    
T  28501637 cactctcacaatatgaaccctaaaa 28501613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 28503904 - 28503780
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaaga--ctctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||  || ||| |||||||||||||||||||| ||| ||    
T  28503904 ccaatccaatatgagaaagtgttacaaaaggttacaagaaactctagccttcaagctttacacaagaataaaccctagattctaccctttggtgtttccc 28503805  T
Q  99 cactctcacactatgaaccctaaaa 123  Q
    |||||||||| ||||||||||||||    
T  28503804 cactctcacaatatgaaccctaaaa 28503780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 2677115 - 2676939
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    ||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||| |  ||| ||||||| |||||||||||||||||||    
T  2677115 ccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacatgacaaaaccctagat-ctaccctttggtattttcc 2677017  T
Q  99 cactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 175  Q
    ||  |||||||||||||||||||| |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  2677016 catcctcacactatgaaccctaaatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 2676939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 24968164 - 24968340
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcc-ttcaagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    ||||||||||||| ||| |||||||||||| ||||||||| ||||||  |||||||||||||||| |||||| || |||| ||||||||||||| |||||    
T  24968164 ccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagctattcaagctttacacatgaacaaacccgagat-ctaccctttggtactttcc 24968262  T
Q  99 cactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 175  Q
    ||  |||||||||||||||||||| |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  24968263 catcctcacactatgaaccctaaatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 24968340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 2672959 - 2672783
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    ||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||| |  ||| ||||||| |||||||||||||||||||    
T  2672959 ccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacatgacaaaaccctagat-ctaccctttggtattttcc 2672861  T
Q  99 cactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 175  Q
    ||  ||||||||||||||| |||| |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  2672860 catcctcacactatgaaccttaaatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 2672783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 7167301 - 7167425
Alignment:
Q  1 ccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccctttggtattttc 97  Q
    |||||||||||||| |||||||||||||| ||||||||||  |  |||||||||||||| |||||  |||||| |||||||||||||||||||||||| |    
T  7167301 ccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaaaccctagattctaccctttggtatttcc 7167399  T
Q  98 ccactctcacactatgaaccctaaaa 123  Q
    ||||||||||| ||||||||||||||    
T  7167400 ccactctcacaatatgaaccctaaaa 7167425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 7167478 - 7167558
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 204  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7167478 acccaaggtgattacaatgttttttcccaacccaagagacactctcaacaaagacactcaaccc-tttggttccctcctttg 7167558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 28501560 - 28501480
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 204  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  28501560 acccaaggtgattacaatgtttttcccaa-cccaagagacactctcaacaaagacactcatcccttttggttccctcctttg 28501480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 28503727 - 28503647
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 204  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28503727 acccaaggtgattacaatatttttcccaa-cccaagagacactctcaacaaagacactcaacccttttggttccctcctttg 28503647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 2671449 - 2671370
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 204  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  2671449 acccaaggtgattacaatgtttttcccaa-cccaagagacactctctacaaagacactcaaccc-tttggttccctcctttg 2671370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 8512274 - 8512450
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    ||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||  |  ||| ||||||  ||||||||||||| |||||    
T  8512274 ccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaaaaccctagac-ctaccctttggtaatttcc 8512372  T
Q  99 cactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 175  Q
    ||  ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  8512373 caacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 8512450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 8517154 - 8517330
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    ||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||  |  ||| ||||||  ||||||||||||| |||||    
T  8517154 ccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaaaaccctagac-ctaccctttggtaatttcc 8517252  T
Q  99 cactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 175  Q
    ||  ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  8517253 caacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 8517330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 40372659 - 40372580
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 204  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  40372659 acccaaggtgattacaatgtttttcccaa-cccaagagacactctctacaaagacactcaaccc-tttggttccctcctttg 40372580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 8477598 - 8477674
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcct 201  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  8477598 acccaaggtgattacaatgtttttcccaa-cccaagagacactctctacaaagacactcaaccc-tttggttccctcct 8477674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 8738926 - 8738846
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttgc 205  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||| |||||||||||||||||    
T  8738926 acccaaggtgattacaatgtttttcccaa-cccaagagatactctctacaaagacactcaaccca-ttggttccctcctttgc 8738846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 9091164 - 9091085
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttg 204  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||| |||||||||||||||||    
T  9091164 acccaaggtgattacaatgtttttccc-aacccaagagatactctctacaaagacactcaaccc-tttggttccctcctttg 9091085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 8739103 - 8738982
Alignment:
Q  1 ccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccctttggtattttc 97  Q
    |||||||||||||| |||||||||||||| ||||||||||  |  |||||||||||||| |||||  |||||  |||||||||||||| |  |||||| |    
T  8739103 ccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaatccctagattctacccatatgtatttcc 8739005  T
Q  98 ccactctcacactatgaacccta 120  Q
    ||||||||||| |||||||||||    
T  8739004 ccactctcacaatatgaacccta 8738982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 9091341 - 9091220
Alignment:
Q  1 ccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccctttggtattttc 97  Q
    |||||||||||||| |||||||||||||| ||||||||||  |  |||||||||||||| |||||  |||||  |||||||||||||| |  |||||| |    
T  9091341 ccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaatccctagattctacccatatgtatttcc 9091243  T
Q  98 ccactctcacactatgaacccta 120  Q
    ||||||||||| |||||||||||    
T  9091242 ccactctcacaatatgaacccta 9091220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 8477419 - 8477545
Alignment:
Q  1 ccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacaca-taaacaaagcctagattctaccctttggtatttt 96  Q
    |||||||||||||| |||||||||||||| ||||||||||  |  |||| | ||||||| ||||| |||||||  |||||||||||||||||||| |||     
T  8477419 ccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcttgcaagctt-acacaataaacaagacctagattctaccctttggtgtttc 8477517  T
Q  97 ccc-actctcacactatgaaccctaaaa 123  Q
    ||| ||||||||| ||||||||||||||    
T  8477518 ccccactctcacaatatgaaccctaaaa 8477545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 26928631 - 26928507
Alignment:
Q  1 ccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacataaacaaagcctagattctaccctttggtattttc 97  Q
    |||||||| ||||| |||||||||||||| ||||||||||     |||| | ||||||| |||||  |||||  |||||||||||||| || || ||| |    
T  26928631 ccaatccactatgatgaaagtgttacaaagggttacaagaaaaaatagcttgcaagctt-acacaagaacaagacctagattctacccatttgtgtttcc 26928533  T
Q  98 ccactctcacactatgaaccctaaaa 123  Q
    ||||||||||| ||||||||||||||    
T  26928532 ccactctcacaatatgaaccctaaaa 26928507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 1306179 - 1306239
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaac 184  Q
    |||||||||| |||||||||||||||| |||||||||||  ||| | |||||||||||||||    
T  1306179 acccaaggtgtttacaatgtttttccc-aacccaagagatcctcactacaaagacactcaac 1306239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 144; Significance: 7e-76; HSPs: 2)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 31 - 206
Target Start/End: Complemental strand, 3845 - 3672
Alignment:
Q  31 gttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaagg 130  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3845 gttacaagactctagccttcaagctttacacatgaacaaaccctagat-ctaccctttggtattttcccactctcacactatgaaccctaaaacccaagg 3747  T
Q  131 tgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttgct 206  Q
    |||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3746 tgattacaatgttttt-cctaacctaagagacactctcaacaaagacactcaacccatttggttccctcctttgct 3672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 9670 - 9521
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacataaacaaagcctagattctaccctttggtattttccca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||    
T  9670 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacacatgaacaaaccctagat-ctaccctttggtattttccca 9572  T
Q  101 ctctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaa 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9571 ctctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaa 9521  T

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Target: scaffold0464 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 420 - 605
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaaggttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctttggtattttccc 99  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||| |||||| ||||||  ||||||||||||||||||||    
T  420 ccaatccaatatgtgaa-gtgttacaaaaggttacaagactctagcttatcaagctttacacatgaacaaaccctagaa-ctaccctttggtattttccc 517  T
Q  100 actctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccat 188  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| |||| || |||||| ||||| ||| || |||||    
T  518 actctcacactatgaacccaaaatcccaaggtgattacaatgtttttccc-aacctaagaaactctctcatcaaaggcacacaccccat 605  T

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Target: scaffold0259 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 2279 - 2103
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataaacaaagcc-tagattctaccctttggtattttc 97  Q
    ||||||||||||| ||| |||||||||||| ||||||||| |||||| | |||||||||||||| | ||||| || ||||| ||||||||||||| ||||    
T  2279 ccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacaca-agacaaaaccatagat-ctaccctttggtaatttc 2182  T
Q  98 ccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 175  Q
    |||  ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  2181 ccaacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 2103  T

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Target: scaffold0028 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 148984 - 148808
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataaacaaagcc-tagattctaccctttggtattttc 97  Q
    ||||||||||||| ||| |||||||||||| ||||||||| |||||| | |||||||||||||| | ||||| || ||||| ||||||||||||| ||||    
T  148984 ccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacaca-agacaaaaccatagat-ctaccctttggtaatttc 148887  T
Q  98 ccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 175  Q
    |||  ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  148886 ccaacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 148808  T

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Target: scaffold0197 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 14337 - 14161
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    ||||||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||||  |  ||| ||||||  ||||||||||||| |||||    
T  14337 ccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaaaaccctagac-ctaccctttggtaatttcc 14239  T
Q  99 cactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 175  Q
    ||  ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  14238 caacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 14161  T

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Target: scaffold0197; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 19193 - 19017
Alignment:
Q  1 ccaatccaatatgagaaagtgttacaaaag-gttacaagactctagcct-tcaagctttacacataaacaaagcctagattctaccctttggtattttcc 98  Q
    ||||| ||||||| ||  |||||||||||| ||||||||| |||||| | ||||||||||||||  |  ||| ||||||| ||||||||||||| |||||    
T  19193 ccaatacaatatgtgagtgtgttacaaaagagttacaagaatctagcttatcaagctttacacaagacaaaaccctagat-ctaccctttggtaatttcc 19095  T
Q  99 cactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 175  Q
    ||  ||||||||||||||||  ||  ||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  19094 caacctcacactatgaacccataattccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 19017  T

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Target: scaffold0009 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 80 - 175
Target Start/End: Complemental strand, 176925 - 176829
Alignment:
Q  80 ctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt-tttcccaaacccaagagacactctcaacaaag 175  Q
    ||||||||||||| |||||||  ||||||||||||||||  || |||||||||||||||||||| ||| || |||| |||| ||||||||| |||||    
T  176925 ctaccctttggtaatttcccaacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 176829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 17818 - 17756
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 186  Q
    ||||||||||||||||||||||||||| |||||||||||  ||||| |||||||||||||||||    
T  17818 acccaaggtgattacaatgtttttccc-aacccaagagatcctctctacaaagacactcaaccc 17756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 23911 - 23849
Alignment:
Q  123 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaaccc 186  Q
    ||||||||||||||||||||||||||| |||||||||||  ||||| |||||||||||||||||    
T  23911 acccaaggtgattacaatgtttttccc-aacccaagagatcctctctacaaagacactcaaccc 23849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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