View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1119_high_12 (Length: 282)

Name: NF1119_high_12
Description: NF1119
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1119_high_12
NF1119_high_12
[»] chr8 (28 HSPs)
chr8 (23-81)||(34992256-34992314)
chr8 (23-80)||(41859309-41859366)
chr8 (23-80)||(5034897-5034954)
chr8 (23-79)||(5035268-5035324)
chr8 (23-79)||(32536708-32536764)
chr8 (24-72)||(37639718-37639766)
chr8 (31-80)||(25876520-25876569)
chr8 (23-79)||(34992015-34992071)
chr8 (31-80)||(61453-61502)
chr8 (30-79)||(27918046-27918095)
chr8 (31-79)||(1365829-1365877)
chr8 (42-80)||(44098432-44098470)
chr8 (30-79)||(41092172-41092221)
chr8 (23-79)||(38023624-38023680)
chr8 (31-79)||(39254787-39254835)
chr8 (30-77)||(41348146-41348193)
chr8 (32-79)||(43924490-43924537)
chr8 (31-72)||(4364046-4364087)
chr8 (31-80)||(7424562-7424611)
chr8 (31-80)||(30272956-30273005)
chr8 (31-80)||(39255752-39255801)
chr8 (23-80)||(41860088-41860145)
chr8 (31-80)||(44751607-44751656)
chr8 (31-79)||(62240-62288)
chr8 (31-79)||(36936418-36936466)
chr8 (31-79)||(36936697-36936745)
chr8 (23-71)||(37640554-37640601)
chr8 (31-79)||(42345166-42345214)
[»] chr6 (27 HSPs)
chr6 (23-79)||(3543055-3543111)
chr6 (23-77)||(3542816-3542870)
chr6 (24-80)||(7193337-7193393)
chr6 (23-79)||(33480620-33480676)
chr6 (23-77)||(33479698-33479752)
chr6 (23-75)||(22582471-22582523)
chr6 (23-75)||(22587302-22587354)
chr6 (24-79)||(15083311-15083366)
chr6 (24-79)||(22579935-22579990)
chr6 (23-81)||(33018408-33018466)
chr6 (23-79)||(33018167-33018223)
chr6 (30-79)||(24125972-24126021)
chr6 (26-79)||(24126713-24126766)
chr6 (24-80)||(7193571-7193627)
chr6 (23-74)||(15082402-15082453)
chr6 (31-80)||(7159341-7159390)
chr6 (31-79)||(7531829-7531877)
chr6 (32-74)||(10607406-10607448)
chr6 (30-72)||(10608319-10608361)
chr6 (31-81)||(14337557-14337607)
chr6 (45-79)||(15082638-15082672)
chr6 (45-79)||(22580597-22580631)
chr6 (45-79)||(22587083-22587117)
chr6 (45-79)||(33479938-33479972)
chr6 (31-80)||(7532440-7532489)
chr6 (32-80)||(1035404-1035452)
chr6 (31-79)||(9574571-9574619)
[»] chr2 (23 HSPs)
chr2 (23-79)||(14573261-14573317)
chr2 (23-80)||(21471016-21471073)
chr2 (24-79)||(21471947-21472002)
chr2 (23-80)||(37547997-37548054)
chr2 (23-80)||(38834628-38834685)
chr2 (23-79)||(13134318-13134374)
chr2 (23-79)||(4479694-4479750)
chr2 (24-80)||(14573992-14574048)
chr2 (23-81)||(38834385-38834443)
chr2 (31-79)||(33433160-33433208)
chr2 (31-81)||(5276463-5276513)
chr2 (43-80)||(1164788-1164825)
chr2 (30-79)||(16426553-16426602)
chr2 (30-79)||(40992222-40992271)
chr2 (32-80)||(41984726-41984774)
chr2 (30-81)||(2650227-2650278)
chr2 (30-80)||(24727820-24727870)
chr2 (37-79)||(24741811-24741853)
chr2 (30-80)||(30545434-30545484)
chr2 (31-80)||(4478850-4478899)
chr2 (31-80)||(19521917-19521966)
chr2 (32-81)||(41043329-41043378)
chr2 (27-79)||(30544727-30544779)
[»] chr7 (37 HSPs)
chr7 (23-80)||(37468909-37468966)
chr7 (23-79)||(668179-668235)
chr7 (23-79)||(17145622-17145678)
chr7 (23-79)||(37468997-37469053)
chr7 (24-80)||(38778853-38778909)
chr7 (23-79)||(38779555-38779611)
chr7 (23-77)||(7677801-7677855)
chr7 (23-80)||(41194512-41194569)
chr7 (24-80)||(4261589-4261645)
chr7 (24-79)||(669096-669151)
chr7 (23-80)||(37864299-37864356)
chr7 (23-80)||(38071897-38071954)
chr7 (23-79)||(38072283-38072339)
chr7 (30-80)||(29006346-29006396)
chr7 (31-72)||(20890206-20890247)
chr7 (32-81)||(44909360-44909409)
chr7 (23-75)||(4261209-4261261)
chr7 (23-75)||(7677421-7677473)
chr7 (23-79)||(17145864-17145920)
chr7 (32-80)||(45887981-45888029)
chr7 (32-80)||(47331954-47332002)
chr7 (32-79)||(24322352-24322399)
chr7 (30-80)||(29007198-29007248)
chr7 (30-80)||(41224842-41224892)
chr7 (32-80)||(4985395-4985443)
chr7 (32-80)||(4989493-4989541)
chr7 (30-82)||(29314578-29314630)
chr7 (32-72)||(45887286-45887326)
chr7 (32-79)||(41533896-41533943)
chr7 (45-78)||(668420-668453)
chr7 (30-79)||(27599211-27599260)
chr7 (30-79)||(27600094-27600143)
chr7 (31-80)||(29315311-29315360)
chr7 (30-79)||(44896046-44896095)
chr7 (33-74)||(48259820-48259861)
chr7 (32-80)||(24321424-24321472)
chr7 (32-72)||(24322429-24322469)
[»] chr5 (30 HSPs)
chr5 (23-80)||(8204119-8204176)
chr5 (23-80)||(12190150-12190207)
chr5 (23-79)||(15184009-15184065)
chr5 (23-80)||(33002808-33002865)
chr5 (23-80)||(36626622-36626679)
chr5 (23-79)||(686417-686472)
chr5 (23-80)||(33001931-33001988)
chr5 (32-79)||(39950404-39950451)
chr5 (23-80)||(8040194-8040251)
chr5 (23-79)||(15183088-15183145)
chr5 (23-80)||(8040436-8040493)
chr5 (32-80)||(33284024-33284072)
chr5 (27-78)||(687344-687395)
chr5 (32-79)||(2319266-2319313)
chr5 (30-73)||(4607470-4607513)
chr5 (30-79)||(4608589-4608638)
chr5 (31-80)||(13654932-13654981)
chr5 (32-80)||(2319968-2320016)
chr5 (31-79)||(16971033-16971081)
chr5 (32-80)||(26268343-26268391)
chr5 (43-79)||(39950444-39950480)
chr5 (29-80)||(13404701-13404752)
chr5 (32-79)||(26269022-26269069)
chr5 (45-79)||(686667-686701)
chr5 (30-80)||(2458353-2458403)
chr5 (31-80)||(8226641-8226690)
chr5 (30-79)||(31148444-31148493)
chr5 (33-74)||(39167442-39167483)
chr5 (31-79)||(26688166-26688214)
chr5 (31-79)||(26957897-26957945)
[»] chr4 (60 HSPs)
chr4 (23-80)||(11417686-11417743)
chr4 (23-80)||(26611275-26611332)
chr4 (24-80)||(29651325-29651381)
chr4 (23-81)||(31836452-31836510)
chr4 (23-79)||(10424123-10424179)
chr4 (24-80)||(10425052-10425108)
chr4 (23-79)||(11417929-11417985)
chr4 (23-79)||(38694946-38695002)
chr4 (23-79)||(39523263-39523319)
chr4 (24-79)||(36865710-36865765)
chr4 (23-80)||(21166367-21166424)
chr4 (23-79)||(45235952-45236008)
chr4 (24-79)||(45230365-45230420)
chr4 (30-81)||(47377597-47377648)
chr4 (23-80)||(9939363-9939420)
chr4 (23-79)||(21165447-21165503)
chr4 (23-75)||(38143729-38143781)
chr4 (31-74)||(3847891-3847934)
chr4 (23-74)||(26610350-26610401)
chr4 (23-78)||(36864818-36864873)
chr4 (24-79)||(38694702-38694757)
chr4 (31-81)||(47198603-47198653)
chr4 (31-80)||(42544487-42544536)
chr4 (26-79)||(47376852-47376905)
chr4 (24-80)||(39522374-39522430)
chr4 (31-74)||(3848578-3848621)
chr4 (23-78)||(29650416-29650471)
chr4 (30-72)||(11680283-11680325)
chr4 (30-72)||(11688562-11688604)
chr4 (32-74)||(25370511-25370553)
chr4 (30-80)||(28684231-28684281)
chr4 (30-79)||(30808621-30808670)
chr4 (30-79)||(37275088-37275137)
chr4 (32-81)||(46765169-46765218)
chr4 (31-80)||(52757812-52757861)
chr4 (31-79)||(25371545-25371593)
chr4 (32-79)||(38014923-38014970)
chr4 (31-82)||(55159177-55159228)
chr4 (45-79)||(10424385-10424419)
chr4 (30-72)||(12590202-12590244)
chr4 (45-79)||(21166137-21166171)
chr4 (30-80)||(23425206-23425256)
chr4 (30-72)||(25655638-25655680)
chr4 (27-65)||(25970120-25970158)
chr4 (45-79)||(29650655-29650689)
chr4 (45-79)||(31836221-31836255)
chr4 (30-80)||(31910553-31910603)
chr4 (45-79)||(45235733-45235767)
chr4 (31-80)||(30478308-30478357)
chr4 (30-79)||(42545562-42545611)
chr4 (31-80)||(47199395-47199444)
chr4 (31-80)||(48013316-48013365)
chr4 (31-80)||(55160067-55160115)
chr4 (32-80)||(11681275-11681323)
chr4 (32-80)||(11689554-11689602)
chr4 (32-80)||(12589286-12589334)
chr4 (30-62)||(23383327-23383359)
chr4 (35-79)||(23865321-23865365)
chr4 (27-79)||(31835148-31835200)
chr4 (30-78)||(52758709-52758757)
[»] chr3 (42 HSPs)
chr3 (23-80)||(36750429-36750486)
chr3 (96-149)||(48715120-48715173)
chr3 (23-79)||(19132804-19132860)
chr3 (219-267)||(48705313-48705361)
chr3 (23-81)||(32490187-32490245)
chr3 (24-78)||(38922744-38922798)
chr3 (23-80)||(41755498-41755555)
chr3 (23-79)||(19132563-19132619)
chr3 (23-79)||(32489946-32490002)
chr3 (24-79)||(45242980-45243035)
chr3 (27-79)||(38923661-38923713)
chr3 (24-80)||(44687156-44687212)
chr3 (32-79)||(31556217-31556264)
chr3 (23-74)||(36750050-36750101)
chr3 (30-81)||(37105076-37105127)
chr3 (23-78)||(45242067-45242122)
chr3 (23-77)||(3970994-3971048)
chr3 (23-77)||(3998833-3998887)
chr3 (30-80)||(14667296-14667345)
chr3 (23-80)||(41756424-41756481)
chr3 (23-80)||(44686254-44686310)
chr3 (30-79)||(49757181-49757230)
chr3 (30-78)||(42145277-42145325)
chr3 (211-267)||(48715295-48715351)
chr3 (23-82)||(52492271-52492330)
chr3 (33-79)||(17226968-17227014)
chr3 (30-80)||(49756274-49756324)
chr3 (24-80)||(3971895-3971951)
chr3 (24-80)||(3997927-3997983)
chr3 (32-79)||(21811879-21811926)
chr3 (32-79)||(31556188-31556235)
chr3 (30-77)||(32994927-32994974)
chr3 (30-81)||(46719659-46719710)
chr3 (30-68)||(37104363-37104401)
chr3 (45-79)||(38923438-38923472)
chr3 (45-79)||(45242307-45242341)
chr3 (45-79)||(52491891-52491925)
chr3 (38-79)||(17227955-17227996)
chr3 (31-80)||(43638078-43638127)
chr3 (31-80)||(49749124-49749173)
chr3 (32-72)||(38337478-38337518)
chr3 (31-79)||(39901846-39901894)
[»] chr1 (35 HSPs)
chr1 (23-80)||(51974436-51974493)
chr1 (23-79)||(16270207-16270263)
chr1 (23-79)||(23440857-23440913)
chr1 (23-80)||(43737970-43738027)
chr1 (23-80)||(48972437-48972494)
chr1 (23-79)||(9948879-9948935)
chr1 (23-79)||(43737729-43737785)
chr1 (23-79)||(193850-193906)
chr1 (23-79)||(50827083-50827138)
chr1 (30-80)||(1012546-1012596)
chr1 (23-79)||(16271140-16271196)
chr1 (23-79)||(51975219-51975275)
chr1 (24-79)||(9947995-9948050)
chr1 (24-79)||(48971705-48971760)
chr1 (24-77)||(38931240-38931293)
chr1 (31-80)||(51987826-51987875)
chr1 (27-79)||(23440617-23440669)
chr1 (24-79)||(38930312-38930367)
chr1 (31-80)||(35616775-35616824)
chr1 (31-80)||(45064685-45064734)
chr1 (33-78)||(49611562-49611607)
chr1 (31-79)||(8560839-8560887)
chr1 (31-79)||(49610706-49610754)
chr1 (31-79)||(51988464-51988512)
chr1 (30-80)||(1013471-1013521)
chr1 (45-79)||(16270901-16270935)
chr1 (45-79)||(38930574-38930608)
chr1 (30-80)||(45065385-45065435)
chr1 (31-73)||(48870753-48870795)
chr1 (31-79)||(194701-194749)
chr1 (32-80)||(8561737-8561785)
chr1 (32-72)||(14924681-14924721)
chr1 (32-72)||(14925343-14925383)
chr1 (31-79)||(37874064-37874112)
chr1 (33-81)||(48869767-48869815)
[»] scaffold0041 (2 HSPs)
scaffold0041 (24-79)||(27568-27623)
scaffold0041 (23-79)||(27221-27277)
[»] scaffold0311 (1 HSPs)
scaffold0311 (27-81)||(156-210)
[»] scaffold0155 (1 HSPs)
scaffold0155 (30-79)||(17339-17388)
[»] scaffold0332 (1 HSPs)
scaffold0332 (23-79)||(9250-9306)


Alignment Details
Target: chr8 (Bit Score: 59; Significance: 5e-25; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 34992256 - 34992314
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34992256 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 34992314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 41859366 - 41859309
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41859366 catgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 41859309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 5034954 - 5034897
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  5034954 catgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 5034897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 5035268 - 5035324
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||    
T  5035268 catgatcaactttcctatggtggaaaagaactctcctttcccaaattaaatggcacc 5035324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 32536764 - 32536708
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  32536764 catgatcaactttcccatggtgggaaagaactctcatttcctaaattaaatggcacc 32536708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 37639766 - 37639718
Alignment:
Q  24 atgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaa 72  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37639766 atgatcaactttcccatggtgggaaagaactctcctttcccaaattaaa 37639718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 25876569 - 25876520
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  25876569 actttcccatggtgggaaaaaaatcttctttcccaaattaaatggcacct 25876520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 34992071 - 34992015
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||| ||||||||| ||| ||||||| |||||||||||||||||||||    
T  34992071 catgatcaacttttccatggtggaaaataactctcgtttcccaaattaaatggcacc 34992015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 61502 - 61453
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  61502 actttcccatggtgggaaagaagtctcctttcccaaattaaatgccacct 61453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 27918046 - 27918095
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||||||||| |||| |||||||||||||| ||||||    
T  27918046 aactttcccatggtgggaaaaaagtctcatttcccaaattaaacggcacc 27918095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 1365877 - 1365829
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||||| || ||||||||||||||||||||| ||||    
T  1365877 actttcccatggtgggaaagaagtctcctttcccaaattaaatgccacc 1365829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 44098432 - 44098470
Alignment:
Q  42 gtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  44098432 gtgggaaagaactctcctttcccaaattaaatggcacct 44098470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 41092221 - 41092172
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||| |||||||||||||||||   |||||||||||||||||||||||    
T  41092221 aacttttccatggtgggaaaaaacaagcctttcccaaattaaatggcacc 41092172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 38023680 - 38023624
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||| ||||| ||| ||| || ||||||||||||||||||||| ||||    
T  38023680 catgatcaacttttccatgatggaaaagaattctcctttcccaaattaaatgacacc 38023624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 39254835 - 39254787
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||| ||||||||||| || ||||||||||||||||||||| ||||    
T  39254835 actttcctatggtgggaaagaagtctcctttcccaaattaaatgccacc 39254787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 41348193 - 41348146
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 77  Q
    ||||||||||||||||| |||||||  |||||||||||||||| ||||    
T  41348193 aactttcccatggtggggaaaaactaacctttcccaaattaaacggca 41348146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 43924537 - 43924490
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||||||| ||||  |||||||||||||||||| ||||    
T  43924537 ctttcccatggtgggaaacaacttccctttcccaaattaaatgccacc 43924490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 4364087 - 4364046
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaa 72  Q
    ||||||||||| |||||||||| | |||||||||||||||||    
T  4364087 actttcccatgatgggaaaaaagtttcctttcccaaattaaa 4364046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 7424562 - 7424611
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||| |||||| ||| ||||| |||||||||| ||||||    
T  7424562 actttcccatggtggaaaaaaagtcttctttctcaaattaaattgcacct 7424611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 30272956 - 30273005
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||| |||||||||| | | ||||||||||||||| |||||||    
T  30272956 actttcccatgatgggaaaaaagtttgctttcccaaattaaacggcacct 30273005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 39255752 - 39255801
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||| || |||| |||||||| ||||||| |||||    
T  39255752 actttcccatggtgggaaagaagtctcatttcccaagttaaatgccacct 39255801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 41860088 - 41860145
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||| |||| ||   ||| |||||| |||||||||||||||||||||||    
T  41860088 catgatcaacttttccatagtaaaaaataactcttctttcccaaattaaatggcacct 41860145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 44751656 - 44751607
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||| ||||||| || ||||||||||||| ||||||| |||||    
T  44751656 actttcccatgatgggaaagaagtctcctttcccaagttaaatgccacct 44751607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 62240 - 62288
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||| ||||||||||| || ||||||||| ||||||||||| ||||    
T  62240 actttcctatggtgggaaagaagtctcctttctcaaattaaatgtcacc 62288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 36936418 - 36936466
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||| |||||||||| | | ||||||||||||||| ||||||    
T  36936418 actttcccatgatgggaaaaaagtttgctttcccaaattaaacggcacc 36936466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 36936697 - 36936745
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||| |||||||||| | | ||||||||||||||| ||||||    
T  36936697 actttcccatgatgggaaaaaagtttgctttcccaaattaaacggcacc 36936745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 37640554 - 37640601
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaa 71  Q
    |||||||||||| ||||| |||  |||||||||||||||||||||||||    
T  37640554 catgatcaactt-cccatagtgtaaaaaaactctcctttcccaaattaa 37640601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 42345214 - 42345166
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||    
T  42345214 actttcccatgatgggaaagaagtttactttcccaaattaaatggcacc 42345166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 7e-24; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 3543055 - 3543111
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3543055 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 3543111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 3542870 - 3542816
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3542870 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 3542816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 7193393 - 7193337
Alignment:
Q  24 atgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7193393 atgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 7193337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 33480620 - 33480676
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33480620 catgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 33480676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 33479752 - 33479698
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 77  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33479752 catgatcaactttcccatggtgggaaataactctcctttcccaaattaaatggca 33479698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 22582471 - 22582523
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatgg 75  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22582471 catgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatgg 22582523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 22587302 - 22587354
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatgg 75  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22587302 catgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatgg 22587354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 15083311 - 15083366
Alignment:
Q  24 atgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  15083311 atgatcaactttctcatggtgggaaagaactctcctttcccaaattaaatggcacc 15083366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 22579990 - 22579935
Alignment:
Q  24 atgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  22579990 atgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 22579935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 33018408 - 33018466
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 81  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||    
T  33018408 catgatcaactttcccatggtgggaaagaactctcctttcccaaattaaacgacacctc 33018466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 33018223 - 33018167
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||    
T  33018223 catgatcaactttccaatgatgggaaagaactctcctttcccaaattaaatggcacc 33018167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 24126021 - 24125972
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| ||||    
T  24126021 aactttcccatggtgggaaacaactcccctttcccaaattaaatgccacc 24125972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 24126713 - 24126766
Alignment:
Q  26 gatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||||||| ||||    
T  24126713 gatcaactttcccatgatgggaaacaactcccctttcccaaattaaatgccacc 24126766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 7193571 - 7193627
Alignment:
Q  24 atgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||||||||| ||| ||| |||||| ||||| |||||||||||||||||    
T  7193571 atgatcaactttcccatgatggaaaagaactctactttctcaaattaaatggcacct 7193627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 15082453 - 15082402
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatg 74  Q
    ||||||||||||||||||| ||| ||| ||||||| ||||||||||||||||    
T  15082453 catgatcaactttcccatgatggaaaagaactctcatttcccaaattaaatg 15082402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 7159341 - 7159390
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||| |||||||||| | | |||||||||||||||||||||||    
T  7159341 actttcccatgatgggaaaaaagtttgctttcccaaattaaatggcacct 7159390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 7531877 - 7531829
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||| ||||| || ||||||||||||||||||||| ||||    
T  7531877 actttcccatggtaggaaagaagtctcctttcccaaattaaatgccacc 7531829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 10607448 - 10607406
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatg 74  Q
    |||||||||||||||||||||||   |||||||||||||||||    
T  10607448 ctttcccatggtgggaaaaaactagtctttcccaaattaaatg 10607406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 10608319 - 10608361
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaa 72  Q
    ||||||||||||||||||||||||   ||||||||||||||||    
T  10608319 aactttcccatggtgggaaaaaaccagcctttcccaaattaaa 10608361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 14337557 - 14337607
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 81  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||||    
T  14337557 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacctc 14337607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 15082638 - 15082672
Alignment:
Q  45 ggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||| |||||||||||||||||||||||||||||    
T  15082638 ggaaagaactctcctttcccaaattaaatggcacc 15082672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 22580631 - 22580597
Alignment:
Q  45 ggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||| |||||||||||||||||||||||||||||    
T  22580631 ggaaagaactctcctttcccaaattaaatggcacc 22580597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 22587117 - 22587083
Alignment:
Q  45 ggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||| |||||||||||||||||||||||||||||    
T  22587117 ggaaagaactctcctttcccaaattaaatggcacc 22587083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 33479938 - 33479972
Alignment:
Q  45 ggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||| |||||||||||||||||||||||||||||    
T  33479938 ggaaagaactctcctttcccaaattaaatggcacc 33479972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 7532440 - 7532489
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||  ||| || ||||||||||||||||||||| |||||    
T  7532440 actttcccatggtgaaaaagaagtctcctttcccaaattaaatgccacct 7532489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 1035404 - 1035452
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||| |||||||||| |  ||||| ||||||||||||||||||    
T  1035404 ctttcccatgatgggaaaaaattaaccttttccaaattaaatggcacct 1035452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 9574571 - 9574619
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||| ||||||||||| || ||||||||||||| ||||||| ||||    
T  9574571 actttcctatggtgggaaagaagtctcctttcccaagttaaatgccacc 9574619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 7e-24; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 14573317 - 14573261
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14573317 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 14573261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 21471073 - 21471016
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21471073 catgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 21471016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 21471947 - 21472002
Alignment:
Q  24 atgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21471947 atgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 21472002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 37548054 - 37547997
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  37548054 catgatcaactttcccatgatgggaaagaactctcctttcccaaattaaatggcacct 37547997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 38834628 - 38834685
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  38834628 catgatcaactttcccacggtaggaaaaaactctcctttcccaaattaaatggcacct 38834685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 13134374 - 13134318
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  13134374 catgatcaactttcctatggtgggaaagaactctcctttcccaaattaaatggcacc 13134318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 4479694 - 4479750
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  4479694 catgattaactttcccatggtgagaaagaactctcctttcccaaattaaatggcacc 4479750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 14573992 - 14574048
Alignment:
Q  24 atgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||    
T  14573992 atgatcaactttcttatggtgggaaagaactctcctttcccaaattaaatggcacct 14574048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 38834443 - 38834385
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 81  Q
    |||||||||||||||| ||||||||||  || |||||||||||||||||||||||||||    
T  38834443 catgatcaactttcccgtggtgggaaagtaccctcctttcccaaattaaatggcacctc 38834385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 33433160 - 33433208
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||||| |||||||||||| ||||||||| ||||||    
T  33433160 actttcccatggtgggaaagaactctcctttctcaaattaaacggcacc 33433208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 5276513 - 5276463
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 81  Q
    ||||||||||||||||||| || ||||||||||||| ||||||| ||||||    
T  5276513 actttcccatggtgggaaagaagtctcctttcccaagttaaatgccacctc 5276463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 1164788 - 1164825
Alignment:
Q  43 tgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  1164788 tgggaaagaactctcctttcccaaattaaatggcacct 1164825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 16426602 - 16426553
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||| |||||||||||||||||   |||||||||||||||||||||||    
T  16426602 aacttttccatggtgggaaaaaacaagcctttcccaaattaaatggcacc 16426553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 40992271 - 40992222
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||| |||||||||   |||||||||||||||||||||||    
T  40992271 aactttcccatggtaggaaaaaacaaacctttcccaaattaaatggcacc 40992222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 41984774 - 41984726
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||| |||||||||  |||||||||||||||||| |||||    
T  41984774 ctttcccatggtgagaaaaaactagcctttcccaaattaaatgccacct 41984726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 2650278 - 2650227
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 81  Q
    |||||| ||||| |||||||||| |||| |||||||||||||| ||||||||    
T  2650278 aacttttccatgatgggaaaaaagtctcatttcccaaattaaacggcacctc 2650227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 24727870 - 24727820
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||| ||||| |||||||||| | | |||||||||||||||||||||||    
T  24727870 aacttttccatgatgggaaaaaagtgtgctttcccaaattaaatggcacct 24727820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 79
Target Start/End: Original strand, 24741811 - 24741853
Alignment:
Q  37 ccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||    
T  24741811 ccatggtgggaaaaaagtcttctttcccaaattaaacggcacc 24741853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 30545434 - 30545484
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||  ||||||| ||||  ||||||||||||||||||||||||    
T  30545434 aactttcccatcatgggaaacaacttccctttcccaaattaaatggcacct 30545484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 4478899 - 4478850
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||| ||||||| || | | |||||||||||||||||||||||    
T  4478899 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 4478850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 19521917 - 19521966
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||| ||||||| || | | |||||||||||||||||||||||    
T  19521917 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 19521966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 41043329 - 41043378
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 81  Q
    |||| ||||| ||||||||||||  |||||||||||||||||| ||||||    
T  41043329 cttttccatgatgggaaaaaactagcctttcccaaattaaatgccacctc 41043378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 30544779 - 30544727
Alignment:
Q  27 atcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||  ||||||| ||||  | |||||||||||||||||||||    
T  30544779 atcaactttcccatcatgggaaacaacttccatttcccaaattaaatggcacc 30544727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 5e-22; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 37468966 - 37468909
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37468966 catgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 37468909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 668235 - 668179
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  668235 catgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 668179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 17145678 - 17145622
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17145678 catgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 17145622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 37468997 - 37469053
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37468997 catgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 37469053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 38778909 - 38778853
Alignment:
Q  24 atgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  38778909 atgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 38778853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 38779555 - 38779611
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  38779555 catgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 38779611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 7677801 - 7677855
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 77  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7677801 catgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggca 7677855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 41194569 - 41194512
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41194569 catgattaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 41194512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 4261589 - 4261645
Alignment:
Q  24 atgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  4261589 atgatcaactttcccatggtgggaaagaactctcctttcctaaattaaatggcacct 4261645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 669096 - 669151
Alignment:
Q  24 atgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  669096 atgatcaactttcctatggtgggaaaaaactctcatttcccaaattaaatggcacc 669151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 37864299 - 37864356
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  37864299 catgatcaactttcccatggtgggaaagaactcttatttcccaaattaaatggcacct 37864356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 38071954 - 38071897
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||    
T  38071954 catgatcaactttcccatgatgggaaagaactctcctttcctaaattaaatggcacct 38071897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 38072283 - 38072339
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  38072283 catgatcaactttcccatggtggaaaagaactctcatttcccaaattaaatggcacc 38072339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 29006396 - 29006346
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  29006396 aactttcccatggtgggaaaaaacaagcctttcccaaattaaatggcacct 29006346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 20890247 - 20890206
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaa 72  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  20890247 actttcccatggtgggaaaaaactgtcctttcccaaattaaa 20890206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 44909360 - 44909409
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 81  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||||||    
T  44909360 ctttcccatggtgggaaaaaacttacctttcccaaattaaacggcacctc 44909409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 4261261 - 4261209
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatgg 75  Q
    ||||||||||||||||||||| | ||| ||||||||||||| |||||||||||    
T  4261261 catgatcaactttcccatggtagaaaagaactctcctttcctaaattaaatgg 4261209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 7677473 - 7677421
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatgg 75  Q
    |||||||||||||  |||||||||||| || ||||||||||||||||||||||    
T  7677473 catgatcaactttttcatggtgggaaagaattctcctttcccaaattaaatgg 7677421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 17145864 - 17145920
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||||||| ||   ||| |||||||||||||||||||||||||||||    
T  17145864 catgatcaactttcccatagtaaaaaagaactctcctttcccaaattaaatggcacc 17145920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 45887981 - 45888029
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||||||||||||||  |||||||||||||||||| |||||    
T  45887981 ctttcccatggtgggaaaaaactagcctttcccaaattaaatgccacct 45888029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 47331954 - 47332002
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||||||||||||||  |||||||||||||||||| |||||    
T  47331954 ctttcccatggtgggaaaaaactagcctttcccaaattaaatgtcacct 47332002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 24322352 - 24322399
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||||    
T  24322352 ctttcccatggtgggataaaactaacctttcccaaattaaatggcacc 24322399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 29007198 - 29007248
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||||||||   |||||||||||||||||| |||||    
T  29007198 aactttcccatggtgggaaaaaacaagcctttcccaaattaaatgacacct 29007248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 41224842 - 41224892
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||||||||||||||    ||||||||||||||||||||||||    
T  41224842 aactttcccatggtgggaaaaaataagcctttcccaaattaaatggcacct 41224892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 4985395 - 4985443
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||||||||||||||  | |||||||||||||||| |||||    
T  4985395 ctttcccatggtgggaaaaaactagcatttcccaaattaaatgtcacct 4985443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 4989493 - 4989541
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||||||||||||||  | |||||||||||||||| |||||    
T  4989493 ctttcccatggtgggaaaaaactagcatttcccaaattaaatgtcacct 4989541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 29314630 - 29314578
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctcc 82  Q
    |||||||||||||||| |||||||   |||||| |||||||||||||||||||    
T  29314630 aactttcccatggtggaaaaaaacaagcctttctcaaattaaatggcacctcc 29314578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 45887326 - 45887286
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaa 72  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  45887326 ctttcccatggtgggaaaaaactagcctttcccaaattaaa 45887286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 41533943 - 41533896
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||| ||||||||  |||||||||||||||| ||||||    
T  41533943 ctttcccatggtggaaaaaaacttacctttcccaaattaaacggcacc 41533896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 78
Target Start/End: Original strand, 668420 - 668453
Alignment:
Q  45 ggaaaaaactctcctttcccaaattaaatggcac 78  Q
    ||||| ||||||||||||||||||||||||||||    
T  668420 ggaaagaactctcctttcccaaattaaatggcac 668453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 27599260 - 27599211
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||||||||| ||||| |||||||||  ||||||| ||||    
T  27599260 aactttcccatggtgggaaacaactcccctttcccattttaaatgccacc 27599211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 27600094 - 27600143
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||||||||| ||||| |||||||||  ||||||| ||||    
T  27600094 aactttcccatggtgggaaacaactcccctttcccattttaaatgccacc 27600143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 29315311 - 29315360
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||| ||||||||||||   |||||||||||||||| ||||||    
T  29315311 actttcccatgatgggaaaaaactagtctttcccaaattaaattgcacct 29315360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 44896095 - 44896046
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||| |||||||   ||||||||||||||| ||||||    
T  44896095 aactttcccatggtggggaaaaactagtctttcccaaattaaacggcacc 44896046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 48259820 - 48259861
Alignment:
Q  33 tttcccatggtgggaaaaaactctcctttcccaaattaaatg 74  Q
    ||||||||||||||||||||||  | ||||||||||||||||    
T  48259820 tttcccatggtgggaaaaaactaacatttcccaaattaaatg 48259861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 24321472 - 24321424
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||| ||| ||||| ||||||  ||||||||||||||||||||||||    
T  24321472 ctttcctatgatgggataaaactaacctttcccaaattaaatggcacct 24321424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 24322469 - 24322429
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaa 72  Q
    |||||||||| |||||||||| | |||||||||||||||||    
T  24322469 ctttcccatgatgggaaaaaagtttcctttcccaaattaaa 24322429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 5e-22; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 8204176 - 8204119
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8204176 catgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 8204119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 12190150 - 12190207
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12190150 catgatcaactttcccatggtgggaaaaaactctcttttcccaaattaaatggcacct 12190207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 15184009 - 15184065
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15184009 catgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 15184065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 33002808 - 33002865
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  33002808 catgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatgacacct 33002865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 36626622 - 36626679
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  36626622 catgatcaactttcccatggtgggaaagaactctcatttcccaaattaaatggcacct 36626679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 686472 - 686417
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  686472 catgatcaactttcccatggtgggaaaaa-ctctcctttcccaaattaaatggcacc 686417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 33001988 - 33001931
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||    
T  33001988 catgatcaacttttccatggtgggaaagaactctcctttcccaaattaaatggtacct 33001931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 39950451 - 39950404
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  39950451 ctttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 39950404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 8040251 - 8040194
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||| | ||||||| |||| |||||||||||||||||||||||||    
T  8040251 catgatcaactttcccacgatgggaaagaactgtcctttcccaaattaaatggcacct 8040194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 15183145 - 15183088
Alignment:
Q  23 catgatcaactttcccatggtgggaaa-aaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||    
T  15183145 catgatcaactttctcatgatgggaaataaactctcctttcccaaattaaatggcacc 15183088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 8040436 - 8040493
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||| |||||||||| ||||||||| || | |||||||||||||||||||||||||    
T  8040436 catgattaactttcccacggtgggaaagaaatttcctttcccaaattaaatggcacct 8040493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 33284024 - 33284072
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||    
T  33284024 ctttcccatggtgggataaaactaacctttcccaaattaaatggcacct 33284072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 687344 - 687395
Alignment:
Q  27 atcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 78  Q
    ||||||||| |||| |||| ||| ||||||||||||||||||||||||||||    
T  687344 atcaacttttccatagtggaaaagaactctcctttcccaaattaaatggcac 687395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 2319313 - 2319266
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||    
T  2319313 ctttcccatggtgggaaaaaactagcctttcccaaattaaatgccacc 2319266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 73
Target Start/End: Complemental strand, 4607513 - 4607470
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaat 73  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||    
T  4607513 aactttcccatggtgggaaaaaagtctactttcccaaattaaat 4607470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 4608589 - 4608638
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||||||||| |||  |||||||||| |||||||||||||    
T  4608589 aactttcccatggtgggaaataacattcctttcccagattaaatggcacc 4608638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 13654981 - 13654932
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||| ||||||||||| || ||||||||||||||||||||| |||||    
T  13654981 actttcctatggtgggaaagaagtctcctttcccaaattaaatgtcacct 13654932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 2319968 - 2320016
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||| ||||||||||||||||  |||||||||||||||||| |||||    
T  2319968 ctttcctatggtgggaaaaaactagcctttcccaaattaaatgccacct 2320016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 16971033 - 16971081
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||| ||||||||||||   ||||||||||||||||||||||    
T  16971033 actttcccatgatgggaaaaaactagtctttcccaaattaaatggcacc 16971081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 26268391 - 26268343
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||||||||||||||  | |||||||||||||||| |||||    
T  26268391 ctttcccatggtgggaaaaaactaacatttcccaaattaaatgccacct 26268343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 39950444 - 39950480
Alignment:
Q  43 tgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||| |||||||||||||||||||||||||||||    
T  39950444 tgggaaagaactctcctttcccaaattaaatggcacc 39950480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 13404701 - 13404752
Alignment:
Q  29 caactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||||||||   ||| ||||||||||||||| |||||    
T  13404701 caactttcccatggtgggaaaaaagagtccgttcccaaattaaatgccacct 13404752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 26269022 - 26269069
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||| ||||||||||||  |||||||||||||||||| ||||    
T  26269022 ctttcccatgatgggaaaaaactaacctttcccaaattaaatgccacc 26269069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 686667 - 686701
Alignment:
Q  45 ggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||| |||||||||||||||||||||||||||||    
T  686667 ggaaagaactctcctttcccaaattaaatggcacc 686701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 2458353 - 2458403
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||| ||||||||| |||||| |||| |||||||||||||| |||||||    
T  2458353 aacttttccatggtggaaaaaaagtctcatttcccaaattaaacggcacct 2458403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 8226690 - 8226641
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||| |||||| ||||||||| ||| ||||| |||||||||||||||||    
T  8226690 acttttccatggagggaaaaaattcttctttctcaaattaaatggcacct 8226641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 31148444 - 31148493
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||| |||||||||| | | ||||||||||||||| ||||||    
T  31148444 aactttcccatgatgggaaaaaagtgtgctttcccaaattaaacggcacc 31148493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 39167442 - 39167483
Alignment:
Q  33 tttcccatggtgggaaaaaactctcctttcccaaattaaatg 74  Q
    ||||||||| ||||||| || |||||||||||||||||||||    
T  39167442 tttcccatgatgggaaagaagtctcctttcccaaattaaatg 39167483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 26688214 - 26688166
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||    
T  26688214 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacc 26688166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 26957945 - 26957897
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||    
T  26957945 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacc 26957897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 5e-22; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 11417743 - 11417686
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11417743 catgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 11417686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 26611275 - 26611332
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26611275 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatgacacct 26611332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 29651325 - 29651381
Alignment:
Q  24 atgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29651325 atgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 29651381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 31836452 - 31836510
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 81  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  31836452 catgatcaactttcccatggtgggaaagaactctcctttctcaaattaaatggcacctc 31836510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 10424179 - 10424123
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  10424179 catgatcaactttcctatggtgggaaagaactctcctttcccaaattaaatggcacc 10424123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 10425052 - 10425108
Alignment:
Q  24 atgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  10425052 atgatcaactttcccatggtgggaaagaactctcctttcctaaattaaatggcacct 10425108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 11417929 - 11417985
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  11417929 catgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatgacacc 11417985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 38694946 - 38695002
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  38694946 catgatcaactttctcatggtgggaaagaactctcctttcccaaattaaatggcacc 38695002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 39523263 - 39523319
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  39523263 catgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 39523319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 36865710 - 36865765
Alignment:
Q  24 atgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  36865710 atgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatgtcacc 36865765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 21166367 - 21166424
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||    
T  21166367 catgatcaactttcccatgatgggaaagaactctcctttctcaaattaaatggcacct 21166424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 45235952 - 45236008
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  45235952 catgattaactttcccatggtgggaaagaactctccttttccaaattaaatggcacc 45236008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 45230420 - 45230365
Alignment:
Q  24 atgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  45230420 atgatcaactttcccatggtgggaaagaactctcttttcccgaattaaatggcacc 45230365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 47377597 - 47377648
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 81  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  47377597 aactttcccatggtgggaaacaactcccctttcccaaattaaatggcacctc 47377648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 9939363 - 9939420
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||| ||||||||||||| ||||| |||||| |||||||||||||||||    
T  9939363 catgatcaacttttccatggtgggaaagaactcccctttctcaaattaaatggcacct 9939420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 21165503 - 21165447
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||| |||||||||||| |||| | ||||||||||||||||||||||    
T  21165503 catgatcaactttctcatggtgggaaagaactattctttcccaaattaaatggcacc 21165447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 38143729 - 38143781
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatgg 75  Q
    ||||| ||||||||||||||||||||| ||||||| |||||||||||||||||    
T  38143729 catgaccaactttcccatggtgggaaagaactctcatttcccaaattaaatgg 38143781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 3847934 - 3847891
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatg 74  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  3847934 actttcccatggtgggaaaaaagtctcctttcccaaattaaatg 3847891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 26610401 - 26610350
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatg 74  Q
    ||||||||| ||||||||||||||||| ||||||| ||||||||||||||||    
T  26610401 catgatcaattttcccatggtgggaaagaactctcatttcccaaattaaatg 26610350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 36864873 - 36864818
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 78  Q
    |||||||||||||| ||||||| |||| ||||||||||||||||||||||| ||||    
T  36864873 catgatcaactttctcatggtgagaaagaactctcctttcccaaattaaatagcac 36864818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 38694757 - 38694702
Alignment:
Q  24 atgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||| ||||| ||||||| ||||||||||| |||||||||||||||||    
T  38694757 atgatcaacttttccatgctgggaaagaactctccttttccaaattaaatggcacc 38694702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 47198653 - 47198603
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 81  Q
    ||||||||||||||||||| || ||||||||||||||||||||| ||||||    
T  47198653 actttcccatggtgggaaagaagtctcctttcccaaattaaatgtcacctc 47198603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 42544536 - 42544487
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  42544536 acttttccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 42544487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 47376905 - 47376852
Alignment:
Q  26 gatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||||||| ||||    
T  47376905 gatcaactttcccatgatgggaaacaactcccctttcccaaattaaatgccacc 47376852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 39522430 - 39522374
Alignment:
Q  24 atgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||||||||||||  ||| |||| ||||||||||||||||||| |||||    
T  39522430 atgatcaactttcccatggtgaaaaagaactatcctttcccaaattaaatgacacct 39522374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 3848578 - 3848621
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatg 74  Q
    ||||||||||||||||||| || |||||||||||||||||||||    
T  3848578 actttcccatggtgggaaagaagtctcctttcccaaattaaatg 3848621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 29650471 - 29650416
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 78  Q
    ||||||||||||||||| | ||| ||| ||||||| ||||||||||||||||||||    
T  29650471 catgatcaactttcccaagatggaaaagaactctcatttcccaaattaaatggcac 29650416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 72
Target Start/End: Complemental strand, 11680325 - 11680283
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaa 72  Q
    |||||||||||||||||||||||||  ||||||||||||||||    
T  11680325 aactttcccatggtgggaaaaaactaacctttcccaaattaaa 11680283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 72
Target Start/End: Complemental strand, 11688604 - 11688562
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaa 72  Q
    |||||||||||||||||||||||||  ||||||||||||||||    
T  11688604 aactttcccatggtgggaaaaaactaacctttcccaaattaaa 11688562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 25370553 - 25370511
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatg 74  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  25370553 ctttcccatggtgggaaaaaactagcctttcccaaattaaatg 25370511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 28684231 - 28684281
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||| ||||| |||||||| ||||||||||||||||||||| |||||    
T  28684231 aactttcctatggtaggaaaaaagtctcctttcccaaattaaatgtcacct 28684281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 30808670 - 30808621
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||||||||| |||||||||||||||  ||||||| ||||    
T  30808670 aactttcccatggtgggaaacaactctcctttcccattttaaatgccacc 30808621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 37275137 - 37275088
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||| |||||||||||| || ||||||||||||||||||| ||||||    
T  37275137 aactttctcatggtgggaaagaagtctcctttcccaaattaaacggcacc 37275088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 46765169 - 46765218
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 81  Q
    |||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  46765169 ctttcccatggtgggaaaaaactagtctttcccaaattaaatgccacctc 46765218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 52757861 - 52757812
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||| |||| ||||||||| ||| |||||||||||||||||||||||    
T  52757861 actttcctatggagggaaaaaagtcttctttcccaaattaaatggcacct 52757812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 25371545 - 25371593
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||| |||||||||||| || ||||||||||||||||||||| ||||    
T  25371545 actttctcatggtgggaaagaagtctcctttcccaaattaaatgtcacc 25371593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 38014923 - 38014970
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||| |||||||  |||||||||||||||| ||||||    
T  38014923 ctttcccatggtggggaaaaactagcctttcccaaattaaacggcacc 38014970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 55159228 - 55159177
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctcc 82  Q
    ||||||||||||| ||||| || ||||||||||||||||||||  |||||||    
T  55159228 actttcccatggtaggaaagaagtctcctttcccaaattaaataccacctcc 55159177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 10424385 - 10424419
Alignment:
Q  45 ggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||| |||||||||||||||||||||||||||||    
T  10424385 ggaaagaactctcctttcccaaattaaatggcacc 10424419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 12590202 - 12590244
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaa 72  Q
    |||||||||||||||| ||||||||  ||||||||||||||||    
T  12590202 aactttcccatggtggaaaaaaactagcctttcccaaattaaa 12590244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 21166171 - 21166137
Alignment:
Q  45 ggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||| |||||||||||||||||||||||||||||    
T  21166171 ggaaagaactctcctttcccaaattaaatggcacc 21166137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 23425206 - 23425256
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||||||||||| |||||||| |||||| | |||||| |||||    
T  23425206 aactttcccatggtgggaaacaactctccattcccatactaaatgccacct 23425256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 25655638 - 25655680
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaa 72  Q
    |||||||||||||||||||||||||   |||||||||||||||    
T  25655638 aactttcccatggtgggaaaaaactagtctttcccaaattaaa 25655680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 65
Target Start/End: Complemental strand, 25970158 - 25970120
Alignment:
Q  27 atcaactttcccatggtgggaaaaaactctcctttccca 65  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  25970158 atcaactttcccatggtgggaaacaactcccctttccca 25970120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 29650655 - 29650689
Alignment:
Q  45 ggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||| |||||||||||||||||||||||||||||    
T  29650655 ggaaagaactctcctttcccaaattaaatggcacc 29650689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 31836255 - 31836221
Alignment:
Q  45 ggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||| |||||||||||||||||||||||||||||    
T  31836255 ggaaagaactctcctttcccaaattaaatggcacc 31836221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 31910603 - 31910553
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||||||||   ||||||| |||||||||| |||||    
T  31910603 aactttcccatggtgggaaaaaacaagcctttcctaaattaaatgacacct 31910553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 45235767 - 45235733
Alignment:
Q  45 ggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||| |||||||||||||||||||||||||||||    
T  45235767 ggaaagaactctcctttcccaaattaaatggcacc 45235733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 30478357 - 30478308
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||| ||||||| || | | |||||||||||||||||||||||    
T  30478357 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 30478308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 42545562 - 42545611
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||| ||| |||||||||| | | ||||||||||||||||||||||    
T  42545562 aactttcctatgatgggaaaaaagtgtactttcccaaattaaatggcacc 42545611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 47199395 - 47199444
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||| ||||||||||| || |||| |||||||||||||||| |||||    
T  47199395 actttcctatggtgggaaagaagtctcttttcccaaattaaatgccacct 47199444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 48013365 - 48013316
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||| ||||||| || | | |||||||||||||||||||||||    
T  48013365 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 48013316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 55160067 - 55160115
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||||| ||||||  ||||||||||||||||||||| |||||    
T  55160067 actttcccatggtgagaaaaag-tctcctttcccaaattaaatgccacct 55160115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 11681275 - 11681323
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||||||||||||||   |||| |||||||||||| |||||    
T  11681275 ctttcccatggtgggaaaaaactagtcttttccaaattaaatgccacct 11681323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 11689554 - 11689602
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||||||||||||||   |||| |||||||||||| |||||    
T  11689554 ctttcccatggtgggaaaaaactagtcttttccaaattaaatgccacct 11689602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 12589334 - 12589286
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||| |||||||||||||   ||||||||||||||||| |||||    
T  12589334 ctttcccatagtgggaaaaaactaatctttcccaaattaaatgtcacct 12589286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 62
Target Start/End: Complemental strand, 23383359 - 23383327
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttc 62  Q
    |||||||||||||||||||| ||||||||||||    
T  23383359 aactttcccatggtgggaaacaactctcctttc 23383327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 23865321 - 23865365
Alignment:
Q  35 tcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||| || ||||||||| ||||||||| ||||||    
T  23865321 tcccatggtgggaaacaagtctcctttcacaaattaaacggcacc 23865365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 31835200 - 31835148
Alignment:
Q  27 atcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||| ||||||||||| |||| | ||||  ||||||||||||||||    
T  31835200 atcaactttcctatggtgggaaagaactatactttttcaaattaaatggcacc 31835148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 52758709 - 52758757
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 78  Q
    |||||||||||| || |||||||||  | ||||||||||||||||||||    
T  52758709 aactttcccatgatgagaaaaaactagcatttcccaaattaaatggcac 52758757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 5e-22; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 36750429 - 36750486
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36750429 catgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 36750486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 48715120 - 48715173
Alignment:
Q  96 tcatttatccgtgaactgaaactcattcatatttatcacaattattaaggaaaa 149  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  48715120 tcattcatccgtgaactgaaactcattcatatttatcacaattattaaggaaaa 48715173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 19132804 - 19132860
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  19132804 catgatcaactttcccatggtgggaaagaactttcctttcccaaattaaatggcacc 19132860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 48705313 - 48705361
Alignment:
Q  219 gcaattagtaagaattaccgtgtgcagctgcagcgacgacgtccctatg 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  48705313 gcaattagtaagaattaccgtgtgcagctgcagcgacgacgtccctatg 48705361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 32490187 - 32490245
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 81  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||    
T  32490187 catgatcaacttttccatggtgggaaagaactctcctttcccaaattaaatggtacctc 32490245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 38922798 - 38922744
Alignment:
Q  24 atgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 78  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  38922798 atgatcaactttcccatggtaggaaataactctcctttcccaaattaaatggcac 38922744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 41755555 - 41755498
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||    
T  41755555 catgatcaattttctcatggtgggaaaaaactctcctttcccaaattaaatgacacct 41755498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 19132619 - 19132563
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||||||| || ||||| |||||||||||||||||||||||||||||    
T  19132619 catgatcaactttcccatagtaggaaagaactctcctttcccaaattaaatggcacc 19132563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 32490002 - 32489946
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||    
T  32490002 catgatcaactttcccatggtggaaaagaattctcctttcccaaattaaatggcacc 32489946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 45242980 - 45243035
Alignment:
Q  24 atgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  45242980 atgatcaactttcccatggtggaaaagaactcttctttcccaaattaaatggcacc 45243035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 38923661 - 38923713
Alignment:
Q  27 atcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||||||||    
T  38923661 atcaacttttccatggtgggaaagaactctcatttcccaaattaaatggcacc 38923713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 44687156 - 44687212
Alignment:
Q  24 atgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||| ||||||||| ||| || |||||||||||||||||||||||||||    
T  44687156 atgatcaacttttccatggtggaaaagaattctcctttcccaaattaaatggcacct 44687212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 31556217 - 31556264
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  31556217 ctttcccatgatgggaaagaactctcctttcccaaattaaatggcacc 31556264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 36750101 - 36750050
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatg 74  Q
    ||||||||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  36750101 catgatcaacttttccatggtggaaaagaactctcctttcccaaattaaatg 36750050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 37105076 - 37105127
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 81  Q
    ||||||||||||||||||||||| |||| |||||||||||||| ||||||||    
T  37105076 aactttcccatggtgggaaaaaagtctcgtttcccaaattaaacggcacctc 37105127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 45242122 - 45242067
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 78  Q
    ||||||||||||||||||| ||| ||| ||||||| ||||||||||||||||||||    
T  45242122 catgatcaactttcccatgatggaaaagaactctcatttcccaaattaaatggcac 45242067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 3971048 - 3970994
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 77  Q
    ||||||||||||| ||||||||  ||||||||||| |||||||||||||||||||    
T  3971048 catgatcaacttttccatggtgaaaaaaaactctcatttcccaaattaaatggca 3970994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 3998833 - 3998887
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 77  Q
    ||||||||||||| ||||||||  ||||||||||| |||||||||||||||||||    
T  3998833 catgatcaacttttccatggtgaaaaaaaactctcatttcccaaattaaatggca 3998887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 14667345 - 14667296
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  14667345 aactttcccatggtgggaaaaaa-tctcctttcccaaattaaacggcacct 14667296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 41756424 - 41756481
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||| ||||||| ||||||||||||| || ||||||| |||||    
T  41756424 catgatcaactttcccatgatgggaaagaactctcctttcctaacttaaatgacacct 41756481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 44686310 - 44686254
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||||| |||||||  ||||||||||||||| ||||||||||||||||||    
T  44686310 catgatcaactttctcatggtga-aaaaaactctccttttccaaattaaatggcacct 44686254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 49757181 - 49757230
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||| |||||||| ||||||||||||||||||| ||||||    
T  49757181 aactttcccatggtaggaaaaaagtctcctttcccaaattaaacggcacc 49757230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 42145277 - 42145325
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 78  Q
    |||||||| ||||||| |||||| |||||||||||||||||||||||||    
T  42145277 aactttcctatggtggaaaaaaagtctcctttcccaaattaaatggcac 42145325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 211 - 267
Target Start/End: Original strand, 48715295 - 48715351
Alignment:
Q  211 agagagatgcaattagtaagaattaccgtgtgcagctgcagcgacgacgtccctatg 267  Q
    |||||| |||||||||||| |||||||||||||||| |||| |||||||||| ||||    
T  48715295 agagaggtgcaattagtaataattaccgtgtgcagcggcagagacgacgtccttatg 48715351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 52492271 - 52492330
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctcc 82  Q
    ||||| ||||||| ||||||||| ||| ||||||| |||||||||||||||| |||||||    
T  52492271 catgaacaacttttccatggtggaaaagaactctcatttcccaaattaaatgacacctcc 52492330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 17227014 - 17226968
Alignment:
Q  33 tttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||| || ||||||||||||||||||||| ||||    
T  17227014 tttcccatggtgggaaagaaatctcctttcccaaattaaatgccacc 17226968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 49756324 - 49756274
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||||||||||| |||  |||||| ||||||||||||||||||    
T  49756324 aactttcccatggtgggaaataacattccttttccaaattaaatggcacct 49756274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 3971895 - 3971951
Alignment:
Q  24 atgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||||||||  ||||||| |||| || ||||| ||||||||||||||||    
T  3971895 atgatcaactttcccatcatgggaaagaactttcatttcctaaattaaatggcacct 3971951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 3997983 - 3997927
Alignment:
Q  24 atgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||||||||  ||||||| |||| || ||||| ||||||||||||||||    
T  3997983 atgatcaactttcccatcatgggaaagaactttcatttcctaaattaaatggcacct 3997927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 21811926 - 21811879
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||| |||||||| |||| |||||||||||||| ||||||    
T  21811926 ctttcccatggtaggaaaaaagtctcatttcccaaattaaacggcacc 21811879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 31556235 - 31556188
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||  ||||||| ||||||||||| |||||||||||||||||    
T  31556235 ctttcccatcatgggaaagaactctccttttccaaattaaatggcacc 31556188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 32994974 - 32994927
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 77  Q
    |||||||||||| |||||||||| | | ||||||||||||||||||||    
T  32994974 aactttcccatgatgggaaaaaaatgtgctttcccaaattaaatggca 32994927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 46719710 - 46719659
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 81  Q
    |||||||||||| || |||||||||  | |||||||||||||||||||||||    
T  46719710 aactttcccatgatgagaaaaaactagcatttcccaaattaaatggcacctc 46719659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 68
Target Start/End: Complemental strand, 37104401 - 37104363
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaat 68  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  37104401 aactttcccatggtggaaaaaaagtctcctttcccaaat 37104363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 38923472 - 38923438
Alignment:
Q  45 ggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||| |||||||||||||||||||||||||||||    
T  38923472 ggaaagaactctcctttcccaaattaaatggcacc 38923438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 45242307 - 45242341
Alignment:
Q  45 ggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||| |||||||||||||||||||||||||||||    
T  45242307 ggaaagaactctcctttcccaaattaaatggcacc 45242341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 52491925 - 52491891
Alignment:
Q  45 ggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||| |||||||||||||||||||||||||||||    
T  52491925 ggaaagaactctcctttcccaaattaaatggcacc 52491891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 17227955 - 17227996
Alignment:
Q  38 catggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||| || ||||||||||||||||||||| ||||    
T  17227955 catggtgggaaagaagtctcctttcccaaattaaatgccacc 17227996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 43638078 - 43638127
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||| ||||||| || | | |||||||||||||||||||||||    
T  43638078 actttcccatgatgggaaagaagtttactttcccaaattaaatggcacct 43638127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 49749173 - 49749124
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||| ||| |||||||||| | ||||||||||| |||||||||||||    
T  49749173 actttcctatgatgggaaaaaaatttcctttcccaagttaaatggcacct 49749124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 38337478 - 38337518
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaa 72  Q
    |||||||||||||||||| ||||  ||||||||||||||||    
T  38337478 ctttcccatggtgggaaacaacttccctttcccaaattaaa 38337518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 39901894 - 39901846
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||||| ||||||| |||||||  ||||| ||||||    
T  39901894 actttcccatggtgggaaagaactctcatttcccaggttaaacggcacc 39901846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 5e-22; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 51974493 - 51974436
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  51974493 catgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 51974436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 16270263 - 16270207
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16270263 catgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 16270207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 23440857 - 23440913
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23440857 catgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 23440913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 43737970 - 43738027
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  43737970 catgatcaactttcccatgatgggaaagaactctcctttcccaaattaaatggcacct 43738027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 48972437 - 48972494
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  48972437 catgatcaacttttccatggtgggaaagaactctcctttcccaaattaaatggcacct 48972494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 9948879 - 9948935
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  9948879 catgatcaactttcccatggtgggaaagaactctcctttcctaaattaaatggcacc 9948935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 43737785 - 43737729
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  43737785 catgatcaactttcccatggtgggaaataactctactttcccaaattaaatggcacc 43737729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 193906 - 193850
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  193906 catgattaactttctcatggtgggaaagaactctcctttcccaaattaaatggcacc 193850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 50827083 - 50827138
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  50827083 catgatcaactttcccatggtggg-aaaaactctcctttctcaaattaaatggcacc 50827138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 1012596 - 1012546
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  1012596 aactttcccatggtgggaaaaaaatctcctttcccaaattaaacggcacct 1012546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 16271140 - 16271196
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||||| || |||| ||||||||||||| |||||||||||||||    
T  16271140 catgatcaactttcccatgatgagaaagaactctcctttcctaaattaaatggcacc 16271196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 51975219 - 51975275
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||||||| |||  ||| |||||||||||||||||||||||||||||    
T  51975219 catgatcaactttcccatagtgaaaaagaactctcctttcccaaattaaatggcacc 51975275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 9948050 - 9947995
Alignment:
Q  24 atgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||| ||||||||||||| |||| | ||||||||||||||||||||||    
T  9948050 atgatcaacttttccatggtgggaaagaacttttctttcccaaattaaatggcacc 9947995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 48971760 - 48971705
Alignment:
Q  24 atgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||| ||| |||||||| |||||||||||||||||||||||| ||||    
T  48971760 atgatcaactttctcattgtgggaaagaactctcctttcccaaattaaatgacacc 48971705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 38931240 - 38931293
Alignment:
Q  24 atgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 77  Q
    |||||||||||||||||||| | ||| |||||| ||||||||||||||||||||    
T  38931240 atgatcaactttcccatggtagaaaagaactcttctttcccaaattaaatggca 38931293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 51987875 - 51987826
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  51987875 actttcccatggtgggaaagaagtctcctttcccaaattaaatgccacct 51987826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 23440669 - 23440617
Alignment:
Q  27 atcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||| |||| || ||||| |||||||||||||||||||||||||||||    
T  23440669 atcaacttttccatagttggaaagaactctcctttcccaaattaaatggcacc 23440617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 38930367 - 38930312
Alignment:
Q  24 atgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||||||||||  ||| |||| ||||||||||||||||||| ||||    
T  38930367 atgatcaactttcccatggtgaaaaagaactttcctttcccaaattaaatgacacc 38930312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 35616775 - 35616824
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||| || ||||||||||||| ||||||| |||||    
T  35616775 actttcccatggtgggaaagaagtctcctttcccaagttaaatgccacct 35616824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 45064734 - 45064685
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||| ||||||||||||   |||||||||||||||||||||||    
T  45064734 actttcccatgatgggaaaaaactaatctttcccaaattaaatggcacct 45064685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 49611562 - 49611607
Alignment:
Q  33 tttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 78  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||||    
T  49611562 tttcccatgatgggaaaaaactagcctttcccaaattaaatggcac 49611607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 8560887 - 8560839
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||| ||||||| || ||||||||||||||||||||| ||||    
T  8560887 actttcccatgatgggaaagaagtctcctttcccaaattaaatgtcacc 8560839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 49610754 - 49610706
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||| ||||||||| ||| ||||||||||| ||||||||||    
T  49610754 actttcccatggagggaaaaaagtcttctttcccaaataaaatggcacc 49610706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 51988464 - 51988512
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  51988464 actttcccatggtggaaaagaagtctcctttcccaaattaaatgccacc 51988512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 1013471 - 1013521
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||||||||| ||| |||  ||||||||||||||||||| |||||    
T  1013471 aactttcccatggtggaaaataacattcctttcccaaattaaatgacacct 1013521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 16270935 - 16270901
Alignment:
Q  45 ggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||| |||||||||||||||||||||||||||||    
T  16270935 ggaaagaactctcctttcccaaattaaatggcacc 16270901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 38930574 - 38930608
Alignment:
Q  45 ggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||| |||||||||||||||||||||||||||||    
T  38930574 ggaaagaactctcctttcccaaattaaatggcacc 38930608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 45065385 - 45065435
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    ||||||||||||||||||||||||   | ||| ||||||||||||||||||    
T  45065385 aactttcccatggtgggaaaaaacaagctttttccaaattaaatggcacct 45065435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 48870753 - 48870795
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaat 73  Q
    |||||||||||||||||||||| |||| |||||||| ||||||    
T  48870753 actttcccatggtgggaaaaaagtctcatttcccaagttaaat 48870795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 194701 - 194749
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||    
T  194701 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacc 194749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 8561737 - 8561785
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 80  Q
    |||||||||| ||||||||||||   ||||||||||||||||| |||||    
T  8561737 ctttcccatgatgggaaaaaactagtctttcccaaattaaatgtcacct 8561785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 14924721 - 14924681
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaa 72  Q
    |||||||||||||||||| ||||  ||||||||||||||||    
T  14924721 ctttcccatggtgggaaacaacttccctttcccaaattaaa 14924681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 14925343 - 14925383
Alignment:
Q  32 ctttcccatggtgggaaaaaactctcctttcccaaattaaa 72  Q
    |||||||||||||||||| |||| ||||| |||||||||||    
T  14925343 ctttcccatggtgggaaacaactttccttccccaaattaaa 14925383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 37874112 - 37874064
Alignment:
Q  31 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||||| || |||| |||||||| ||||||| ||||    
T  37874112 actttcccatggtgggaaagaagtctcatttcccaagttaaatgtcacc 37874064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 48869815 - 48869767
Alignment:
Q  33 tttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 81  Q
    ||||||||||||| ||| || ||||||||||||| ||||||| ||||||    
T  48869815 tttcccatggtggaaaagaagtctcctttcccaagttaaatgtcacctc 48869767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 27568 - 27623
Alignment:
Q  24 atgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27568 atgatcaactttcccatggtgggaaaaaactctccttttccaaattaaatggcacc 27623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 27277 - 27221
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  27277 catgatcaactttcccatgatgggaaagaactctcctttcccaaattaaatggcacc 27221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 156 - 210
Alignment:
Q  27 atcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 81  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  156 atcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacctc 210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 17388 - 17339
Alignment:
Q  30 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    ||||||||||||||||||||||||   ||||| |||||||||||||||||    
T  17388 aactttcccatggtgggaaaaaacaagccttttccaaattaaatggcacc 17339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 9250 - 9306
Alignment:
Q  23 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 79  Q
    |||||| |||||| ||||||||  ||||||||||||||| |||||||||||| ||||    
T  9250 catgatgaacttttccatggtgaaaaaaaactctccttttccaaattaaatgacacc 9306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University