View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1119_low_15 (Length: 298)
Name: NF1119_low_15
Description: NF1119
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1119_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 41 - 282
Target Start/End: Original strand, 30951712 - 30951951
Alignment:
| Q |
41 |
actatagtatccctaatctccttgcaggagaatgtggcatatataaactaaaatggaggagttcttcatgaggtctggtttctatttaaggtaataccga |
140 |
Q |
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| T |
30951712 |
actatagtatccctaatctccttgcaggagaatgtggcatatataaactaaaatggaggagttcttcatgaggtctggtttctatttaaggtaataccga |
30951811 |
T |
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| Q |
141 |
aaggattgggttttgttaataaattactgggaaacttgtaagctcttaattagtccgatcaaagatcattatataaaatcatcagttattcctcaatatg |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||| |
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| T |
30951812 |
aaggattgggttttgttaataaattactgggaaacttgtaagctcttaattagtccgatcaaagattat--tataaaatcgtcagttattcctcaatatg |
30951909 |
T |
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| Q |
241 |
tcttatttatatatttctttgtcaaatagtatagtggttcat |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
30951910 |
tcttatttatatatttctttgtcaaatagtatagtggttcat |
30951951 |
T |
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