View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1119_low_38 (Length: 213)
Name: NF1119_low_38
Description: NF1119
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1119_low_38 |
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Alignment Details
Target: chr4 (Bit Score: 144; Significance: 7e-76; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 47 - 190
Target Start/End: Original strand, 54656069 - 54656212
Alignment:
| Q |
47 |
tattggtaggtgcatatcatcatatgatcaaaatcagaagtttcttagcacgcgggtcagatggtgacttcccaaagacattgcatcatttgcaggtgag |
146 |
Q |
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| T |
54656069 |
tattggtaggtgcatatcatcatatgatcaaaatcagaagtttcttagcacgcgggtcagatggtgacttcccaaagacattgcatcatttgcaggtgag |
54656168 |
T |
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| Q |
147 |
gtgaggatatatatcaaatgaatgtttttgtgttgagttgatgg |
190 |
Q |
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| T |
54656169 |
gtgaggatatatatcaaatgaatgtttttgtgttgagttgatgg |
54656212 |
T |
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