View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11201_high_29 (Length: 303)
Name: NF11201_high_29
Description: NF11201
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11201_high_29 |
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Alignment Details
Target: chr7 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 34218966 - 34219263
Alignment:
| Q |
1 |
acctgcagctaaatccaatgtaatttgttagataacatacactatataaatttatnnnnnnnncaacaatcaagcaaaaaggaacaaaataatgttatat |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
34218966 |
acctgcagctaaatccaatgtaatttgttagataacatacactatataaatttataaaaaa--caacaatcaagcaaaaaggaacaaaataatgttatat |
34219063 |
T |
|
| Q |
101 |
agttcagaagcatagtcttctcttacaggactcaaatggcaaagtattcgagcatcctaattctctaacaatctcttcaattaaatccctgcatatacaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34219064 |
agttcagaagcatagtcttctcttacaggactcaaatggcaaagtatttgagcatcctaattctctaacaatctcttcaattaaatccctgcatatacaa |
34219163 |
T |
|
| Q |
201 |
tcctgcaaagctaatcctattcttccaagctctctactttctccccaagcaacatccctacacacctcatctacacttctcttcatgcctttgcttctcc |
300 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |
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| T |
34219164 |
tcctgcaaagctaatcctattcttccaagctctctattttctccccaagcaacatccctacacacctcatctacacttctcttcatgcccttgctactcc |
34219263 |
T |
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