View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11203_low_12 (Length: 253)
Name: NF11203_low_12
Description: NF11203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11203_low_12 |
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Alignment Details
Target: chr4 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 92 - 236
Target Start/End: Original strand, 54912852 - 54912997
Alignment:
| Q |
92 |
taattattaattaacagacaaaaactgttgtattaataaaagcatgcaaaattgtatataagg-attaagaaaagaaacctcatgatattgacacgaaga |
190 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
54912852 |
taattattaattaacagacaaaaactgttgtattaataaaagcatgcaaaattgtatataagggattaagaaaagaaacctcatgatattgacacgaaga |
54912951 |
T |
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| Q |
191 |
tgagctctaagctcaatgaagaggtcacgcatctgacccaaatcag |
236 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
54912952 |
tgagctctaagctcaatgaagaggtcacgcatctgacccaaatcag |
54912997 |
T |
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