View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11207_high_15 (Length: 481)

Name: NF11207_high_15
Description: NF11207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11207_high_15
NF11207_high_15
[»] chr5 (68 HSPs)
chr5 (28-260)||(14245202-14245434)
chr5 (1-121)||(14245083-14245203)
chr5 (351-471)||(14245980-14246101)
chr5 (1-115)||(13634840-13634954)
chr5 (255-337)||(14245467-14245549)
chr5 (1-114)||(7544265-7544378)
chr5 (14-120)||(1657955-1658061)
chr5 (1-118)||(16938608-16938725)
chr5 (1-111)||(36363161-36363271)
chr5 (44-116)||(16938479-16938551)
chr5 (1-116)||(28279476-28279591)
chr5 (1-114)||(26415022-26415136)
chr5 (351-452)||(14380124-14380225)
chr5 (51-119)||(13634708-13634776)
chr5 (44-120)||(26414889-26414965)
chr5 (1-116)||(37551536-37551649)
chr5 (1-116)||(37654366-37654479)
chr5 (1-116)||(37607023-37607138)
chr5 (1-116)||(37779232-37779347)
chr5 (1-91)||(4373591-4373681)
chr5 (2-118)||(8502833-8502949)
chr5 (1-65)||(20146917-20146981)
chr5 (1-75)||(9857009-9857083)
chr5 (2-116)||(10650544-10650658)
chr5 (41-113)||(11757072-11757144)
chr5 (1-65)||(36392201-36392265)
chr5 (53-112)||(2550533-2550592)
chr5 (44-119)||(7544133-7544208)
chr5 (47-118)||(12035934-12036005)
chr5 (1-88)||(20513473-20513560)
chr5 (1-121)||(16501781-16501905)
chr5 (22-116)||(33744193-33744287)
chr5 (45-121)||(28279650-28279726)
chr5 (1-81)||(29002241-29002321)
chr5 (72-123)||(5688590-5688641)
chr5 (1-80)||(10072683-10072762)
chr5 (49-116)||(10476205-10476272)
chr5 (43-118)||(11436937-11437012)
chr5 (52-118)||(10476024-10476090)
chr5 (76-118)||(20147074-20147116)
chr5 (73-119)||(40305866-40305912)
chr5 (4-113)||(9798615-9798724)
chr5 (28-114)||(10650429-10650517)
chr5 (49-114)||(34980812-34980877)
chr5 (71-119)||(10204573-10204621)
chr5 (6-118)||(11419190-11419302)
chr5 (71-119)||(15986823-15986871)
chr5 (1-112)||(43536-43650)
chr5 (49-112)||(11756882-11756944)
chr5 (72-123)||(15986617-15986668)
chr5 (49-120)||(40815293-40815364)
chr5 (1-81)||(22023496-22023578)
chr5 (22-116)||(34980960-34981054)
chr5 (44-118)||(36392321-36392395)
chr5 (27-116)||(14684639-14684728)
chr5 (71-119)||(33744392-33744440)
chr5 (76-116)||(40305670-40305710)
chr5 (27-81)||(2550387-2550441)
chr5 (84-118)||(9856888-9856922)
chr5 (75-113)||(21581150-21581188)
chr5 (72-114)||(22022849-22022891)
chr5 (72-114)||(42681450-42681492)
chr5 (81-118)||(14681468-14681505)
chr5 (4-65)||(17024275-17024336)
chr5 (44-116)||(4373738-4373810)
chr5 (72-116)||(10204776-10204820)
chr5 (72-116)||(11437142-11437186)
chr5 (73-113)||(12600703-12600743)
[»] chr4 (67 HSPs)
chr4 (1-120)||(45742019-45742138)
chr4 (1-116)||(54320563-54320678)
chr4 (1-116)||(54935198-54935313)
chr4 (1-119)||(49735465-49735583)
chr4 (1-118)||(41174474-41174591)
chr4 (1-114)||(27735874-27735987)
chr4 (1-116)||(31348316-31348436)
chr4 (27-119)||(56135746-56135838)
chr4 (22-118)||(29993769-29993865)
chr4 (1-116)||(5730830-5730945)
chr4 (49-116)||(26166937-26167004)
chr4 (41-116)||(37711292-37711367)
chr4 (44-118)||(1968531-1968605)
chr4 (51-119)||(31348500-31348568)
chr4 (1-81)||(34110934-34111013)
chr4 (1-96)||(6891489-6891584)
chr4 (1-108)||(17938115-17938222)
chr4 (1-108)||(35248815-35248922)
chr4 (44-118)||(37711136-37711215)
chr4 (50-113)||(46007879-46007942)
chr4 (34-116)||(1968351-1968433)
chr4 (1-119)||(24565343-24565461)
chr4 (22-116)||(37761614-37761708)
chr4 (49-118)||(54935065-54935135)
chr4 (49-118)||(54320433-54320501)
chr4 (68-116)||(49735688-49735736)
chr4 (19-118)||(6938394-6938493)
chr4 (27-123)||(7977652-7977748)
chr4 (44-112)||(27735749-27735817)
chr4 (63-118)||(5731022-5731077)
chr4 (43-118)||(21695059-21695134)
chr4 (49-116)||(47433886-47433953)
chr4 (27-114)||(47846211-47846298)
chr4 (1-59)||(16400929-16400987)
chr4 (26-99)||(21694907-21694980)
chr4 (72-121)||(44145768-44145817)
chr4 (22-119)||(54576324-54576421)
chr4 (9-65)||(29798422-29798478)
chr4 (1-65)||(36151705-36151768)
chr4 (1-99)||(45132514-45132616)
chr4 (75-118)||(53260716-53260759)
chr4 (44-110)||(6938287-6938353)
chr4 (1-81)||(46007734-46007816)
chr4 (49-114)||(2247978-2248043)
chr4 (27-116)||(54576484-54576573)
chr4 (45-113)||(4437428-4437496)
chr4 (1-53)||(26167066-26167118)
chr4 (44-116)||(45132667-45132739)
chr4 (49-116)||(22186719-22186786)
chr4 (27-118)||(29993926-29994017)
chr4 (27-114)||(47846418-47846505)
chr4 (27-114)||(55080581-55080668)
chr4 (49-119)||(17938285-17938355)
chr4 (49-111)||(34110803-34110864)
chr4 (71-109)||(35565565-35565603)
chr4 (49-119)||(51329793-51329863)
chr4 (22-119)||(5825046-5825143)
chr4 (72-113)||(16400803-16400844)
chr4 (49-118)||(29798286-29798355)
chr4 (49-118)||(37761463-37761532)
chr4 (83-116)||(45741890-45741923)
chr4 (1-77)||(2247842-2247918)
chr4 (72-116)||(17182685-17182729)
chr4 (84-116)||(41174356-41174388)
chr4 (6-74)||(47433751-47433819)
chr4 (33-116)||(47694349-47694433)
chr4 (63-99)||(49735658-49735694)
[»] chr6 (40 HSPs)
chr6 (9-118)||(9721136-9721245)
chr6 (9-118)||(9719029-9719138)
chr6 (1-115)||(10818345-10818459)
chr6 (1-114)||(1390448-1390561)
chr6 (44-121)||(14515468-14515545)
chr6 (1-118)||(30487304-30487420)
chr6 (1-118)||(665839-665956)
chr6 (1-116)||(14515600-14515715)
chr6 (1-119)||(33236080-33236197)
chr6 (1-118)||(1300749-1300866)
chr6 (1-81)||(21606879-21606959)
chr6 (43-118)||(10818227-10818302)
chr6 (1-113)||(5585304-5585417)
chr6 (1-65)||(4097563-4097627)
chr6 (1-81)||(33041591-33041671)
chr6 (12-116)||(9298625-9298735)
chr6 (1-114)||(34176464-34176576)
chr6 (1-65)||(2900039-2900103)
chr6 (12-111)||(19278039-19278138)
chr6 (2-115)||(16737997-16738110)
chr6 (44-113)||(19278210-19278278)
chr6 (1-81)||(31849239-31849319)
chr6 (71-118)||(23090993-23091040)
chr6 (52-123)||(31849103-31849174)
chr6 (43-113)||(4097684-4097754)
chr6 (22-116)||(15353364-15353458)
chr6 (50-115)||(9719208-9719273)
chr6 (48-113)||(33041473-33041538)
chr6 (81-121)||(4097230-4097270)
chr6 (74-118)||(9051734-9051778)
chr6 (49-116)||(12811157-12811224)
chr6 (77-116)||(15323225-15323264)
chr6 (82-120)||(3841296-3841334)
chr6 (49-118)||(16738173-16738241)
chr6 (68-113)||(30487501-30487546)
chr6 (1-65)||(1395765-1395829)
chr6 (45-113)||(26318478-26318546)
chr6 (84-121)||(1300624-1300661)
chr6 (73-118)||(10293449-10293493)
chr6 (71-108)||(23091158-23091195)
[»] chr2 (58 HSPs)
chr2 (1-118)||(23748224-23748341)
chr2 (5-115)||(36046205-36046315)
chr2 (1-118)||(9631689-9631806)
chr2 (41-118)||(17380010-17380087)
chr2 (1-118)||(36347539-36347656)
chr2 (14-96)||(8426899-8426981)
chr2 (1-115)||(34209593-34209707)
chr2 (27-118)||(2241573-2241664)
chr2 (49-120)||(15224871-15224942)
chr2 (1-78)||(15224732-15224809)
chr2 (43-116)||(22356175-22356248)
chr2 (1-81)||(39732764-39732844)
chr2 (22-118)||(42813770-42813866)
chr2 (61-116)||(17379846-17379901)
chr2 (26-120)||(35736341-35736435)
chr2 (10-119)||(40022510-40022620)
chr2 (51-116)||(35736175-35736240)
chr2 (27-120)||(41778769-41778862)
chr2 (49-121)||(9426980-9427052)
chr2 (1-116)||(9427114-9427230)
chr2 (44-116)||(36347713-36347785)
chr2 (49-114)||(41841684-41841749)
chr2 (17-81)||(1583222-1583286)
chr2 (255-335)||(23748847-23748927)
chr2 (27-119)||(31795766-31795858)
chr2 (1-92)||(36566874-36566966)
chr2 (45-116)||(39821668-39821740)
chr2 (1-81)||(39821798-39821878)
chr2 (52-111)||(8427051-8427110)
chr2 (62-116)||(40022363-40022416)
chr2 (1-54)||(17379941-17379994)
chr2 (1-65)||(42316815-42316879)
chr2 (27-86)||(12751970-12752029)
chr2 (68-119)||(35531852-35531903)
chr2 (49-116)||(42296480-42296547)
chr2 (1-71)||(27926682-27926752)
chr2 (1-59)||(28262500-28262558)
chr2 (72-114)||(36046401-36046443)
chr2 (49-118)||(34187573-34187642)
chr2 (28-116)||(887266-887353)
chr2 (27-119)||(1270433-1270525)
chr2 (1-65)||(16565906-16565970)
chr2 (53-125)||(17331406-17331478)
chr2 (1-116)||(19566820-19566936)
chr2 (71-118)||(31061357-31061404)
chr2 (55-110)||(31061543-31061598)
chr2 (49-116)||(45257484-45257551)
chr2 (74-120)||(3094555-3094601)
chr2 (27-109)||(31928204-31928286)
chr2 (72-118)||(45257305-45257351)
chr2 (14-118)||(7681386-7681488)
chr2 (78-119)||(12541767-12541808)
chr2 (49-117)||(886918-886985)
chr2 (72-123)||(2380985-2381037)
chr2 (1-37)||(12541895-12541931)
chr2 (56-116)||(16713709-16713769)
chr2 (72-116)||(17334012-17334056)
chr2 (76-116)||(31795968-31796008)
[»] chr1 (54 HSPs)
chr1 (1-121)||(40094928-40095048)
chr1 (6-114)||(12234144-12234252)
chr1 (1-119)||(30010461-30010579)
chr1 (1-116)||(41498533-41498649)
chr1 (5-119)||(8529932-8530046)
chr1 (1-116)||(38509894-38510009)
chr1 (1-113)||(20576136-20576246)
chr1 (1-120)||(7444624-7444743)
chr1 (1-118)||(35349464-35349577)
chr1 (13-116)||(2858932-2859035)
chr1 (44-116)||(35349634-35349706)
chr1 (1-118)||(32951319-32951433)
chr1 (52-119)||(38510074-38510141)
chr1 (47-118)||(41498402-41498473)
chr1 (1-116)||(28770852-28770965)
chr1 (44-118)||(12234008-12234082)
chr1 (22-112)||(35512947-35513037)
chr1 (1-116)||(43551996-43552107)
chr1 (1-98)||(51597797-51597894)
chr1 (44-116)||(30010332-30010404)
chr1 (2-118)||(20607349-20607463)
chr1 (71-117)||(26324013-26324059)
chr1 (1-75)||(49946629-49946703)
chr1 (27-116)||(2470730-2470819)
chr1 (44-116)||(32951490-32951562)
chr1 (1-73)||(36285617-36285689)
chr1 (1-64)||(50744332-50744396)
chr1 (71-119)||(51303381-51303429)
chr1 (44-118)||(10391870-10391944)
chr1 (49-123)||(40095111-40095185)
chr1 (44-109)||(2859104-2859169)
chr1 (1-62)||(45585739-45585800)
chr1 (1-86)||(41676408-41676495)
chr1 (71-118)||(35927812-35927859)
chr1 (72-121)||(1085484-1085533)
chr1 (1-90)||(6563705-6563794)
chr1 (44-113)||(7444481-7444550)
chr1 (128-253)||(23547850-23547975)
chr1 (6-119)||(26940841-26940953)
chr1 (76-116)||(20607223-20607263)
chr1 (21-113)||(40709441-40709532)
chr1 (49-116)||(525277-525344)
chr1 (77-116)||(1085695-1085734)
chr1 (81-116)||(26941042-26941077)
chr1 (49-116)||(40709292-40709359)
chr1 (41-120)||(47261440-47261519)
chr1 (82-116)||(17622536-17622570)
chr1 (255-309)||(23548015-23548069)
chr1 (22-108)||(25268414-25268500)
chr1 (27-108)||(23536843-23536924)
chr1 (1-65)||(40964727-40964792)
chr1 (82-123)||(47071251-47071292)
chr1 (44-81)||(50744453-50744490)
chr1 (51-112)||(51597672-51597733)
[»] chr7 (53 HSPs)
chr7 (1-120)||(18231715-18231834)
chr7 (1-118)||(4833529-4833646)
chr7 (1-118)||(47390985-47391102)
chr7 (8-113)||(42306466-42306571)
chr7 (1-116)||(41496957-41497072)
chr7 (1-116)||(40196532-40196647)
chr7 (1-118)||(10315762-10315879)
chr7 (1-76)||(33655148-33655223)
chr7 (27-121)||(37925836-37925930)
chr7 (44-118)||(39856037-39856111)
chr7 (1-118)||(13425118-13425235)
chr7 (1-116)||(13770948-13771061)
chr7 (49-120)||(1051675-1051746)
chr7 (50-123)||(40282190-40282263)
chr7 (1-101)||(1051515-1051613)
chr7 (1-119)||(25887321-25887439)
chr7 (1-95)||(24970187-24970280)
chr7 (22-116)||(36267553-36267647)
chr7 (51-116)||(25887192-25887257)
chr7 (1-118)||(43230365-43230481)
chr7 (47-116)||(47390855-47390924)
chr7 (1-65)||(34235058-34235122)
chr7 (44-115)||(31571642-31571713)
chr7 (46-113)||(33655282-33655349)
chr7 (49-116)||(36267730-36267797)
chr7 (44-118)||(13771118-13771192)
chr7 (1-59)||(22163167-22163224)
chr7 (1-59)||(22221875-22221932)
chr7 (22-116)||(33519198-33519292)
chr7 (22-119)||(28074100-28074197)
chr7 (1-110)||(37620903-37621012)
chr7 (1-114)||(45940658-45940771)
chr7 (43-116)||(48881558-48881631)
chr7 (27-114)||(37620776-37620863)
chr7 (44-110)||(41008188-41008254)
chr7 (45-114)||(24970338-24970407)
chr7 (49-121)||(34228496-34228568)
chr7 (27-99)||(48013520-48013591)
chr7 (71-116)||(28074307-28074352)
chr7 (22-119)||(33519045-33519142)
chr7 (81-118)||(48881758-48881795)
chr7 (27-123)||(18795750-18795845)
chr7 (26-118)||(30592251-30592343)
chr7 (77-113)||(31364249-31364285)
chr7 (84-120)||(37417835-37417871)
chr7 (72-116)||(39646469-39646513)
chr7 (1-64)||(40572287-40572349)
chr7 (49-118)||(4835477-4835546)
chr7 (4-113)||(26365900-26366009)
chr7 (1-50)||(37417699-37417748)
chr7 (84-125)||(40196733-40196774)
chr7 (49-113)||(43230239-43230303)
chr7 (34-118)||(48152142-48152226)
[»] chr3 (54 HSPs)
chr3 (1-122)||(24560346-24560467)
chr3 (44-120)||(24560213-24560289)
chr3 (1-114)||(41110323-41110436)
chr3 (1-116)||(36568904-36569018)
chr3 (11-119)||(28581183-28581291)
chr3 (1-81)||(37102184-37102264)
chr3 (1-114)||(52474044-52474157)
chr3 (1-121)||(9312471-9312586)
chr3 (1-81)||(30200123-30200203)
chr3 (1-116)||(18654600-18654715)
chr3 (1-116)||(41039950-41040065)
chr3 (1-95)||(25654991-25655085)
chr3 (43-119)||(34641161-34641237)
chr3 (1-110)||(27541937-27542046)
chr3 (1-65)||(220448-220512)
chr3 (1-81)||(21773911-21773991)
chr3 (44-116)||(28582681-28582753)
chr3 (1-65)||(37807209-37807273)
chr3 (1-112)||(10748299-10748405)
chr3 (44-118)||(25655144-25655218)
chr3 (1-82)||(52185145-52185223)
chr3 (1-114)||(16275707-16275820)
chr3 (19-116)||(24253869-24253966)
chr3 (4-96)||(46556277-46556368)
chr3 (63-118)||(18654792-18654847)
chr3 (49-120)||(44412357-44412428)
chr3 (47-120)||(24253717-24253791)
chr3 (47-113)||(27542106-27542172)
chr3 (44-118)||(41110493-41110567)
chr3 (1-114)||(55327499-55327612)
chr3 (43-112)||(55428550-55428619)
chr3 (43-99)||(26135968-26136024)
chr3 (44-121)||(30200263-30200344)
chr3 (68-119)||(5903546-5903597)
chr3 (27-118)||(41414076-41414167)
chr3 (49-118)||(6803378-6803447)
chr3 (49-118)||(9312651-9312715)
chr3 (49-118)||(17474383-17474452)
chr3 (44-121)||(21773777-21773854)
chr3 (72-121)||(42772039-42772088)
chr3 (51-124)||(46205071-46205144)
chr3 (44-116)||(220569-220641)
chr3 (80-119)||(651737-651776)
chr3 (27-110)||(10943769-10943852)
chr3 (27-114)||(13082856-13082943)
chr3 (81-116)||(37102348-37102383)
chr3 (28-86)||(651886-651944)
chr3 (1-59)||(2387817-2387875)
chr3 (34-119)||(23028088-23028173)
chr3 (79-116)||(54574563-54574600)
chr3 (84-116)||(21773984-21774016)
chr3 (76-112)||(31664391-31664427)
chr3 (76-112)||(31931969-31932005)
chr3 (84-116)||(34641002-34641034)
[»] scaffold0067 (2 HSPs)
scaffold0067 (1-116)||(39186-39302)
scaffold0067 (44-118)||(39362-39436)
[»] scaffold0262 (1 HSPs)
scaffold0262 (1-119)||(16293-16411)
[»] chr8 (58 HSPs)
chr8 (1-118)||(31543070-31543187)
chr8 (1-116)||(11785655-11785770)
chr8 (7-113)||(16653084-16653190)
chr8 (6-118)||(34634277-34634389)
chr8 (1-116)||(31738552-31738667)
chr8 (1-110)||(36308972-36309081)
chr8 (1-118)||(41103502-41103621)
chr8 (27-118)||(8815296-8815387)
chr8 (1-108)||(11575415-11575521)
chr8 (1-99)||(1281272-1281370)
chr8 (14-116)||(3726863-3726965)
chr8 (1-81)||(9718514-9718594)
chr8 (44-116)||(31543244-31543316)
chr8 (1-121)||(40990176-40990299)
chr8 (22-116)||(43732837-43732931)
chr8 (27-120)||(12022298-12022391)
chr8 (9-112)||(30479721-30479824)
chr8 (44-118)||(1027020-1027094)
chr8 (44-125)||(1281134-1281215)
chr8 (1-82)||(7502988-7503069)
chr8 (1-81)||(1026884-1026964)
chr8 (1-65)||(37923129-37923193)
chr8 (45-116)||(7503127-7503198)
chr8 (49-112)||(11575583-11575646)
chr8 (47-116)||(9718654-9718723)
chr8 (22-119)||(16024304-16024400)
chr8 (49-114)||(28083744-28083809)
chr8 (6-86)||(2248586-2248666)
chr8 (9-112)||(10028259-10028363)
chr8 (22-118)||(30365280-30365376)
chr8 (44-116)||(40990356-40990427)
chr8 (1-99)||(11033546-11033645)
chr8 (72-119)||(43732676-43732723)
chr8 (1-67)||(6315191-6315257)
chr8 (49-117)||(7394638-7394706)
chr8 (1-65)||(7979269-7979333)
chr8 (49-116)||(2248452-2248519)
chr8 (22-121)||(8815136-8815235)
chr8 (49-116)||(30365130-30365197)
chr8 (1-116)||(37032508-37032624)
chr8 (73-114)||(16024155-16024196)
chr8 (22-123)||(34196459-34196558)
chr8 (49-113)||(37923255-37923320)
chr8 (44-112)||(7979144-7979212)
chr8 (44-124)||(10028102-10028182)
chr8 (22-121)||(12022137-12022237)
chr8 (27-115)||(43826333-43826421)
chr8 (76-123)||(2481977-2482024)
chr8 (77-116)||(4247725-4247764)
chr8 (73-116)||(13404976-13405019)
chr8 (81-119)||(6315063-6315101)
chr8 (51-116)||(11033419-11033482)
chr8 (52-114)||(30479897-30479959)
chr8 (1-71)||(30664490-30664560)
chr8 (84-121)||(36308847-36308884)
chr8 (71-116)||(40632996-40633041)
chr8 (1-65)||(29358391-29358454)
chr8 (44-92)||(30581985-30582033)
[»] scaffold0171 (1 HSPs)
scaffold0171 (4-119)||(16082-16197)
[»] scaffold0198 (1 HSPs)
scaffold0198 (28-113)||(3150-3235)
[»] scaffold0026 (3 HSPs)
scaffold0026 (1-81)||(1301-1381)
scaffold0026 (44-113)||(1175-1244)
scaffold0026 (28-118)||(1554-1644)
[»] scaffold0096 (1 HSPs)
scaffold0096 (49-116)||(6584-6651)
[»] scaffold0294 (1 HSPs)
scaffold0294 (1-114)||(15392-15504)
[»] scaffold0240 (1 HSPs)
scaffold0240 (49-121)||(17717-17787)
[»] scaffold0012 (2 HSPs)
scaffold0012 (43-112)||(184778-184847)
scaffold0012 (84-116)||(184611-184643)
[»] scaffold0007 (1 HSPs)
scaffold0007 (26-112)||(242370-242456)
[»] scaffold0341 (1 HSPs)
scaffold0341 (1-90)||(18898-18987)
[»] scaffold0119 (2 HSPs)
scaffold0119 (27-119)||(30712-30804)
scaffold0119 (27-119)||(37380-37472)
[»] scaffold0027 (1 HSPs)
scaffold0027 (49-121)||(121980-122051)


Alignment Details
Target: chr5 (Bit Score: 217; Significance: 1e-119; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 28 - 260
Target Start/End: Original strand, 14245202 - 14245434
Alignment:
Q  28 aaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttagagaactga 127  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  14245202 aaaaacatttcacagtgtccgtaatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagagaactga 14245301  T
Q  128 ggtggctgaagcggtagtcgctgatgttttgggtttcaggtggggactccaagtggctgcggaacttaatcttaacaaggtcatctttgaactggatgcg 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  14245302 ggtggctgaagcggtagtcgctgatgttttgggtttcaggtggggactccaagtggctgcggaacttaatcttaacaaggtcatctttgaactggatgca 14245401  T
Q  228 caggtggtgattaattgtttcaaagggctgtca 260  Q
    |||||||||||||||||||||||||||||||||    
T  14245402 caggtggtgattaattgtttcaaagggctgtca 14245434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 14245203 - 14245083
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||  ||| ||||||||||||||||||||||||||||     
T  14245203 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccgtaatttaaaaaagaaaagtaaatcctcccctcccttcccctcctaaaccctc 14245104  T
Q  101 aatccaaacacacccttagag 121  Q
    |||||||||||||||||||||    
T  14245103 aatccaaacacacccttagag 14245083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 351 - 471
Target Start/End: Original strand, 14245980 - 14246101
Alignment:
Q  351 atttcactaatttcacactataccatcagtttaaacatactctcgagtcttagataatgggttgtgagattacacaattattagcccttgcataggaaaa 450  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14245980 atttcactaatttcacactataccatcagtttaaacatactcttgagtctt-gataatgggttgtgagattacacaattattagcccttgcttaggaaaa 14246078  T
Q  451 taata--gagttatttgtctctg 471  Q
    |||||  ||||||||||||||||    
T  14246079 taatattgagttatttgtctctg 14246101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 13634840 - 13634954
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| | |||||||||||||||||  || |||||||||||||||||||||||||||||     
T  13634840 ttatcatgttaatatgttaactttttaaaaaacatttcatagtgttcgtaatttaaaaatgaaaagtaacccctcccctcccttcccctcctaaaccctc 13634939  T
Q  101 aatccaaacacaccc 115  Q
    |||||||||||||||    
T  13634940 aatccaaacacaccc 13634954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 255 - 337
Target Start/End: Original strand, 14245467 - 14245549
Alignment:
Q  255 ctgtcatgagttgtatgccaatatggttgatgtttctgttttttacattagtcgtgcctgcaatgaggttgcgcctgagctag 337  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14245467 ctgtcatgagttgtatgccaatatggttgatgtttctgttttttacattagtcgtgcctgcaatgaggttgcgcgtgagctag 14245549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 7544265 - 7544378
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||| ||||||||||| ||||||| |||||||||||||| ||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||     
T  7544265 ttattatgttaatatgctaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaaccaaaccctccccttccttcccctcctaaaccctc 7544364  T
Q  101 aatccaaacacacc 114  Q
     |||||||||||||    
T  7544365 catccaaacacacc 7544378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 1657955 - 1658061
Alignment:
Q  14 atgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacac 113  Q
    ||||||||||| |||||||||||| | ||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||  ||||||||||||    
T  1657955 atgttaactttttaaaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacac 1658054  T
Q  114 ccttaga 120  Q
    | |||||    
T  1658055 ctttaga 1658061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 16938608 - 16938725
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||| ||||||||| | |||||||||||||| ||||||  ||||||||||||||||   |||||||||||||| |||| ||||||||||||     
T  16938608 ttatcatgttaacatgttaactctttaaaaaacatttcatagtgtcagtaatttaaaaatgaaatctaaaccctcccctccattcctctcctaaaccctc 16938707  T
Q  101 aatccaaacacaccctta 118  Q
     |||||||||||||||||    
T  16938708 catccaaacacaccctta 16938725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 36363161 - 36363271
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||| ||||||||||||||||||||| |||||| | ||| ||| |||||||||||||||||   ||| ||| |||||||||||||||||||||||     
T  36363161 ttatcatgctaatatgttaactttctaaaagacattttatagtatccgtaatttaaaaatgaaaagtgaactctctcctcccttcccctcctaaaccctc 36363260  T
Q  101 aatccaaacac 111  Q
     ||||||||||    
T  36363261 catccaaacac 36363271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 16938551 - 16938479
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16938551 gtccgtaacttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 16938479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 28279591 - 28279476
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||  |||   || || || ||||| ||| |||||||     
T  28279591 ttatcatgttaatatgttaactttttaaaaaacatttcataatgtccataatttaaaaatgaaaagtaaattttcaccccctttcccatcccaaaccctc 28279492  T
Q  101 aatccaaacacaccct 116  Q
     |||||||||||||||    
T  28279491 catccaaacacaccct 28279476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 26415022 - 26415136
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctccctt-cccctcctaaaccct 99  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||  ||| |||||||||||||  |||| ||||||||| || |||||| ||||||||    
T  26415022 ttatcatgttaatatgttaactttttataaaacatttcatagtgtctgtaacttaaaaatgaaaagtaaactctcccctcctttccccctcataaaccct 26415121  T
Q  100 taatccaaacacacc 114  Q
      |||||||||||||    
T  26415122 ccatccaaacacacc 26415136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 351 - 452
Target Start/End: Complemental strand, 14380225 - 14380124
Alignment:
Q  351 atttcactaatttcacactataccatcagtttaaacatactctcgagtcttagataatgggttgtgagattacacaattattagcccttgcataggaaaa 450  Q
    ||||||||  || ||||||||||||||| ||| |||||||||||||||||||| ||||||| |||||  |||||||||| ||| ||||||| ||||||||    
T  14380225 atttcactggttccacactataccatcaatttgaacatactctcgagtcttagctaatgggctgtgattttacacaattgttaacccttgcttaggaaaa 14380126  T
Q  451 ta 452  Q
    ||    
T  14380125 ta 14380124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 13634776 - 13634708
Alignment:
Q  51 atttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13634776 atttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacacccttag 13634708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 26414965 - 26414889
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttaga 120  Q
    |||| ||||||||||| |||||  |||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  26414965 gtccgtaatttaaaaacgaaaagtaaaccctcccctcccttctcctcctaaaccctcaatccaaacacacccttaga 26414889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 37551536 - 37551649
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||||| || |||||||||||  |||||  || ||||||||||||||  ||||| ||| ||||||| ||||| ||||||||     
T  37551536 ttatcatgttaatatgttaactttttataaaacatttca--gtgtctgtagtttaaaaatgaaaagtaaaccatcctctccctttccctcgtaaaccctc 37551633  T
Q  101 aatccaaacacaccct 116  Q
     |||||||||||||||    
T  37551634 catccaaacacaccct 37551649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 37654366 - 37654479
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||||| || |||||||||||  |||||  || ||||||||||||||  ||||| ||| ||||||| ||||| ||||||||     
T  37654366 ttatcatgttaatatgttaactttttataaaacatttca--gtgtctgtagtttaaaaatgaaaagtaaaccatcctctccctttccctcgtaaaccctc 37654463  T
Q  101 aatccaaacacaccct 116  Q
     |||||||||||||||    
T  37654464 catccaaacacaccct 37654479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 37607023 - 37607138
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||||| || ||||||||||| ||| ||  || ||||||||||||||  ||||| ||  ||||||| ||||| ||||||||     
T  37607023 ttatcatgttaatatgttaactttttataaaacatttcatagtatctgtattttaaaaatgaaaagtaaaccatcatctccctttccctcgtaaaccctc 37607122  T
Q  101 aatccaaacacaccct 116  Q
     |||||||||||||||    
T  37607123 catccaaacacaccct 37607138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 37779232 - 37779347
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||||| || ||||||||||| ||| ||  || ||||||||||||||  ||||| ||  ||||||| ||||| ||||||||     
T  37779232 ttatcatgttaatatgttaactttttataaaacatttcatagtatctgtagtttaaaaatgaaaagtaaaccatcatctccctttccctcgtaaaccctc 37779331  T
Q  101 aatccaaacacaccct 116  Q
     |||||||||||||||    
T  37779332 catccaaacacaccct 37779347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 4373681 - 4373591
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcc 91  Q
    ||||||||||||||||||||||||  |||||| |||||||||||||| |||||||||||| ||||  |||| |||| ||| ||||||||||    
T  4373681 ttatcatgttaatatgttaacttttaaaaaaatatttcacagtgtccgtaatttaaaaattaaaagtaaactctccactctcttcccctcc 4373591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 8502949 - 8502833
Alignment:
Q  2 tatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctta 101  Q
    |||||| ||||| |||||||||| ||||||| |||||| | ||||| |||||||||||||||||   ||||||||| ||| ||||| || |||||| |      
T  8502949 tatcatattaatttgttaactttttaaaaaatatttcataatgtccgtaatttaaaaatgaaaagtgaaccctcccatccattcccttcataaaccatcc 8502850  T
Q  102 atccaaacacaccctta 118  Q
    |||||||||||||||||    
T  8502849 atccaaacacaccctta 8502833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 20146981 - 20146917
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaa 65  Q
    |||||||||||||||||||||||| |||||||||||||| |||| || |||||||||||||||||    
T  20146981 ttatcatgttaatatgttaactttttaaaaaacatttcatagtgaccgtaatttaaaaatgaaaa 20146917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 9857009 - 9857083
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctc 75  Q
    |||| ||||||||||||||||||| |||||||||||||| ||||||| ||| ||||||||||||  |||||||||    
T  9857009 ttattatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaacttaaaaatgaaagccaaaccctc 9857083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 10650544 - 10650658
Alignment:
Q  2 tatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctta 101  Q
    ||||||| ||||||||||||||| || ||||||||||| ||| ||| |||||||||||  ||||  ||||  || ||||||||||||||| ||||  | |    
T  10650544 tatcatggtaatatgttaactttttataaaacatttcatagtatccgtaatttaaaaacaaaaagtaaactttctcctcccttcccctcccaaactttca 10650643  T
Q  102 atccaaacacaccct 116  Q
    |||||||||||||||    
T  10650644 atccaaacacaccct 10650658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 11757072 - 11757144
Alignment:
Q  41 agtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacac 113  Q
    ||||||| ||||||||||||||||   ||||||||||||||||||||||| ||||||||  ||||||||||||    
T  11757072 agtgtccgtaatttaaaaatgaaatctaaaccctcccctcccttcccctcttaaaccctccatccaaacacac 11757144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 36392265 - 36392201
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaa 65  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||  |||||||||||||||||    
T  36392265 ttatcatgttaatatgttaactttttataaaacatttcatagtgtctgtaatttaaaaatgaaaa 36392201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 2550533 - 2550592
Alignment:
Q  53 ttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacaca 112  Q
    ||||||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||    
T  2550533 ttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacaca 2550592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 7544208 - 7544133
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    |||| ||||||||||| |||||   | ||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  7544208 gtccgtaatttaaaaaagaaaatttagccctcccctcccttcccttcctaaaccctcaatccaaacacacccttag 7544133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 12036005 - 12035934
Alignment:
Q  47 cataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    ||||||||||||| |||||||||  ||||| |||||||||||||||||||| |  |||||||||||||||||    
T  12036005 cataatttaaaaaagaaaaacaagtcctcctctcccttcccctcctaaaccatctatccaaacacaccctta 12035934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 20513560 - 20513473
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccc 88  Q
    |||||||| ||||||||||||||| |||||||||||||| ||||||  || ||||||||||||||  ||| ||| |||||| ||||||    
T  20513560 ttatcatgataatatgttaactttttaaaaaacatttcatagtgtctgtagtttaaaaatgaaaagtaaatccttccctcctttcccc 20513473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 16501905 - 16501781
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcc--ctt--cccctcctaaac 96  Q
    |||| |||||||||||||||||||  ||||||||||||| | ||||| |||||||||||||||||  ||| || |||||||   ||   |||||||||||    
T  16501905 ttattatgttaatatgttaacttttaaaaaaacatttcataatgtccgtaatttaaaaatgaaaactaaatccgcccctcctaattaaaccctcctaaac 16501806  T
Q  97 ccttaatccaaacacacccttagag 121  Q
    |||  ||||||||||| ||||||||    
T  16501805 cctccatccaaacacaaccttagag 16501781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 33744287 - 33744193
Alignment:
Q  22 tttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||| ||||| ||||| | | ||||||||||||||||| |||||  |||||||||||||||||| || ||| ||||||  |||||||||||||||    
T  33744287 tttcaaaaaatcattttataatgtccataatttaaaaaagaaaagtaaaccctcccctcccttctccgccttaaccctccatccaaacacaccct 33744193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 28279650 - 28279726
Alignment:
Q  45 tccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttagag 121  Q
    ||||||||||||||| |||||  |||||||| |||||||||||||  || || || |||||||||||||||||||||    
T  28279650 tccataatttaaaaaggaaaagtaaaccctctcctcccttccccttatagactctcaatccaaacacacccttagag 28279726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 29002321 - 29002241
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcc 81  Q
    ||||||||||||||||||   |||  ||||||||||| | ||||| |||||||||||||||||||  ||||||||||||||    
T  29002321 ttatcatgttaatatgttgtttttaaaaaaaacattttatagtgttcataatttaaaaatgaaaagtaaaccctcccctcc 29002241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 72 - 123
Target Start/End: Original strand, 5688590 - 5688641
Alignment:
Q  72 cctcccctcccttcccctcctaaacccttaatccaaacacacccttagagaa 123  Q
    |||||| ||||||||||||||||||||| |||||||||||||||| ||||||    
T  5688590 cctcccttcccttcccctcctaaaccctcaatccaaacacaccctaagagaa 5688641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 10072762 - 10072683
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctc 80  Q
    |||||||||||||||||||||||| ||||||| |||||| |||   || |||||||| |||||||  |||||||||||||    
T  10072762 ttatcatgttaatatgttaactttttaaaaaatatttcatagtactcacaatttaaatatgaaaagtaaaccctcccctc 10072683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 10476205 - 10476272
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||||||||||| | ||  |||| |||||||||||||||||||||||||||  |||||||||||||||    
T  10476205 taatttaaaaattataagtaaacactcccctcccttcccctcctaaaccctccatccaaacacaccct 10476272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 11437012 - 11436937
Alignment:
Q  43 tgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    ||||| ||||||||||| | |||  || |||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  11437012 tgtccgtaatttaaaaaaggaaagtaagccctcctctcccttcccctcctaaaccctcaatccaaacacgccctta 11436937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 10476090 - 10476024
Alignment:
Q  52 tttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||||||| |||||  |||||||| | ||||||||||||||||||||| ||| ||||||||||||||    
T  10476090 tttaaaaaagaaaagtaaaccctctcatcccttcccctcctaaaccctcaattcaaacacaccctta 10476024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 76 - 118
Target Start/End: Original strand, 20147074 - 20147116
Alignment:
Q  76 ccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  20147074 ccctcccttcccctcctaaaccctcaatccaaacacaccctta 20147116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 40305866 - 40305912
Alignment:
Q  73 ctcccctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  40305866 ctcccctcccttctcctcctaaaccctcaatccaaacacacccttag 40305912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 9798724 - 9798615
Alignment:
Q  4 tcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaat 103  Q
    ||||||||| || || ||||| |||||||||||||  ||| ||| |||||||||||||||||  |||| ||| | ||||||  ||||||||| |||  ||    
T  9798724 tcatgttaaaatattgactttttaaaaaacatttcgtagtatccgtaatttaaaaatgaaaagtaaactctcacatcccttttcctcctaaatcctccat 9798625  T
Q  104 ccaaacacac 113  Q
    ||||||||||    
T  9798624 ccaaacacac 9798615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 10650517 - 10650429
Alignment:
Q  28 aaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctccc--ttcccctcctaaacccttaatccaaacacacc 114  Q
    |||||||||||| ||||||| |||||||||||| ||||  ||| |||||||||||  ||||||||||||| |||  |||||||| ||||    
T  10650517 aaaaacatttcatagtgtccgtaatttaaaaataaaaagtaaatcctcccctcccttttcccctcctaaatcctccatccaaacgcacc 10650429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 34980877 - 34980812
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacc 114  Q
    |||||||||||| ||||   |||||| |||||||||||||||||||||| | ||||||||||||||    
T  34980877 taatttaaaaattaaaagtgaacccttccctcccttcccctcctaaaccttcaatccaaacacacc 34980812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 10204621 - 10204573
Alignment:
Q  71 ccctcccctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||||    
T  10204621 ccctcacctcccttcccctcctaaaccctcgatccaaacacacccttag 10204573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 118
Target Start/End: Complemental strand, 11419302 - 11419190
Alignment:
Q  6 atgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatcc 105  Q
    ||||||||||||| ||||| | |||||||||| | | ||||| |||||| ||||||||||  |||| |||| ||| |||||| || ||||||||  ||      
T  11419302 atgttaatatgtttacttttttaaaaacattttatattgtccttaatttgaaaatgaaaagtaaactctcctctctcttcccttcataaaccctccatgt 11419203  T
Q  106 aaacacaccctta 118  Q
    |||||||||||||    
T  11419202 aaacacaccctta 11419190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 15986823 - 15986871
Alignment:
Q  71 ccctcccctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    |||||| || ||||||||||||||||||| |||||||||||||||||||    
T  15986823 ccctcctcttccttcccctcctaaaccctcaatccaaacacacccttag 15986871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 43536 - 43650
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataa-tttaaaaatgaaaaacaaaccctcccctcccttcccctcc--taaacc 97  Q
    |||| |||||||||||||||||||  |||||| |||||| ||||| | ||| ||||||||||||||  |||| ||| |||  ||||||||||  ||||||    
T  43536 ttattatgttaatatgttaacttttcaaaaaatatttcatagtgttcgtaattttaaaaatgaaaagtaaactctctcctttcttcccctcctataaacc 43635  T
Q  98 cttaatccaaacaca 112  Q
     || |||||||||||    
T  43636 tttcatccaaacaca 43650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 49 - 112
Target Start/End: Complemental strand, 11756944 - 11756882
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacaca 112  Q
    |||||||||||  |||||||||| ||||| ||||| ||||||||||||||| ||||||||||||    
T  11756944 taatttaaaaaataaaaacaaactctcccatccct-cccctcctaaaccctcaatccaaacaca 11756882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 72 - 123
Target Start/End: Complemental strand, 15986668 - 15986617
Alignment:
Q  72 cctcccctcccttcccctcctaaacccttaatccaaacacacccttagagaa 123  Q
    ||||||||||||||||||||||||||||   |||||||||||||| ||||||    
T  15986668 cctcccctcccttcccctcctaaaccctctttccaaacacaccctaagagaa 15986617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 40815364 - 40815293
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttaga 120  Q
    ||||||||||| |||||  ||| |||| | ||||||||||||||||| | | ||||||||||||||||||||    
T  40815364 taatttaaaaaagaaaagtaaatcctctcttcccttcccctcctaaatcttcaatccaaacacacccttaga 40815293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 22023496 - 22023578
Alignment:
Q  1 ttatcatgttaatatgttaac-tttctaaaaaacatttca-cagtgtccataatttaaaaatgaaaaacaaaccctcccctcc 81  Q
    ||||||||||||||||||||| ||| ||||||||||||||  | | ||| ||||||| |||||||||  ||||||||||||||    
T  22023496 ttatcatgttaatatgttaacttttttaaaaaacatttcataaatatccgtaatttataaatgaaaagtaaaccctcccctcc 22023578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 34980960 - 34981054
Alignment:
Q  22 tttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||||| ||| ||||| | | ||||||||||||||||| |||||  ||  ||||||||||||||||||| ||||||||  ||  |||||||||||    
T  34980960 tttctataaatcattttataatgtccataatttaaaaaagaaaagtaagtcctcccctcccttcccctcttaaaccctccattaaaacacaccct 34981054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 36392321 - 36392395
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||| ||||||||||| |||| | |||| | || ||| |||||||||||||||||| ||||||||||| ||||||    
T  36392321 gtccgtaatttaaaaacgaaatataaacacaccgctctcttcccctcctaaaccctcaatccaaacacgccctta 36392395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 14684639 - 14684728
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||||| | | || || ||||| ||||| |||||  || |||||| ||| || ||||||||||||||| ||||||||||||||||    
T  14684639 aaaaaacattttatattgcccgtaattaaaaaaagaaaagtaagccctcctctctctgcccctcctaaaccctaaatccaaacacaccct 14684728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 33744392 - 33744440
Alignment:
Q  71 ccctcccctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    |||||||||||||||  |||||||||||| |||||||| ||||||||||    
T  33744392 ccctcccctcccttcatctcctaaaccctcaatccaaatacacccttag 33744440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 40305710 - 40305670
Alignment:
Q  76 ccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  40305710 ccctcccttcccctcctaaaccctccatccaaacacaccct 40305670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 2550441 - 2550387
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcc 81  Q
    ||||||||| ||| ||||||  |||||||||||||||||  ||||||||||||||    
T  2550441 aaaaaacatatcatagtgtctgtaatttaaaaatgaaaagtaaaccctcccctcc 2550387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 118
Target Start/End: Complemental strand, 9856922 - 9856888
Alignment:
Q  84 tcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||||||||||||||| ||||||||||||||||||    
T  9856922 tcccctcctaaaccctcaatccaaacacaccctta 9856888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 113
Target Start/End: Original strand, 21581150 - 21581188
Alignment:
Q  75 cccctcccttcccctcctaaacccttaatccaaacacac 113  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  21581150 cccctcccttcccctcctaaaccctccatccaaacacac 21581188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 114
Target Start/End: Complemental strand, 22022891 - 22022849
Alignment:
Q  72 cctcccctcccttcccctcctaaacccttaatccaaacacacc 114  Q
    |||| ||||| ||||||||||||||||| ||||||||||||||    
T  22022891 cctctcctccattcccctcctaaaccctcaatccaaacacacc 22022849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 114
Target Start/End: Complemental strand, 42681492 - 42681450
Alignment:
Q  72 cctcccctcccttcccctcctaaacccttaatccaaacacacc 114  Q
    |||||||||| |||||||| |||||||| ||||||||||||||    
T  42681492 cctcccctcctttcccctcttaaaccctcaatccaaacacacc 42681450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 118
Target Start/End: Complemental strand, 14681505 - 14681468
Alignment:
Q  81 ccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  14681505 ccttcccctcctaaaccctcaatccaaacacacactta 14681468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 17024336 - 17024275
Alignment:
Q  4 tcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaa 65  Q
    ||||||||||||| ||||||| |||| ||||||||| | ||||   ||||||||||||||||    
T  17024336 tcatgttaatatgataactttttaaagaacatttcataatgtctgcaatttaaaaatgaaaa 17024275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 4373738 - 4373810
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||| ||||||||||| |||||  ||| ||||| ||   ||||| ||||||||||| ||||||||||||||||    
T  4373738 gtccgtaatttaaaaaagaaaagtaaatcctccactattttcccttcctaaaccctcaatccaaacacaccct 4373810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 10204776 - 10204820
Alignment:
Q  72 cctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||||||||||||||||||| ||   ||||||||||||||    
T  10204776 cctcccctcccttcccctcctaaactctctttccaaacacaccct 10204820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 11437142 - 11437186
Alignment:
Q  72 cctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||||| ||||||||||| ||||||||| |||||||| |||||||    
T  11437142 cctcccttcccttccccttctaaaccctcaatccaaaaacaccct 11437186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 12600703 - 12600743
Alignment:
Q  73 ctcccctcccttcccctcctaaacccttaatccaaacacac 113  Q
    |||||||| |||||||||||||||| | |||||||||||||    
T  12600703 ctcccctctcttcccctcctaaaccttaaatccaaacacac 12600743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 1e-39; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 45742019 - 45742138
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||  |||| |||||||||||| ||| |||||||||||    
T  45742019 ttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaactctcccctccctttcccgcctaaaccctt 45742118  T
Q  101 aatccaaacacacccttaga 120  Q
     |||||||||||||||||||    
T  45742119 catccaaacacacccttaga 45742138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 54320563 - 54320678
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||| ||||||| |||||||| ||||| ||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||     
T  54320563 ttatcatgttaatatgctaactttttaaaaaacgtttcatagtgtccgtaatttaaaaattaaaatcaaaccctcccctcccttcccctcctaaaccctc 54320662  T
Q  101 aatccaaacacaccct 116  Q
    ||||||||||||||||    
T  54320663 aatccaaacacaccct 54320678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 54935198 - 54935313
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    ||||||| |||||||| ||||||| ||||| |||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  54935198 ttatcatattaatatgataactttttaaaatacatttcatagtgtccgtaatttaaaaatgaaaaataaaccctcccctcccttcccctcctaaaccctc 54935297  T
Q  101 aatccaaacacaccct 116  Q
     |||||||||||||||    
T  54935298 catccaaacacaccct 54935313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 49735583 - 49735465
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||| ||||||||| ||||| ||||||||   ||||| |||||||||||||||||   |||||||||||||||||||||||||||||||     
T  49735583 ttatcatgttaataggttaactttttaaaagacatttcatgttgtccgtaatttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccctc 49735484  T
Q  101 aatccaaacacacccttag 119  Q
    |||||||||||||||||||    
T  49735483 aatccaaacacacccttag 49735465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 41174474 - 41174591
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||| ||||||||||| ||||||| |||||| ||||||| ||||||| ||| |||||||||||||  ||||| ||||||||||||||||||||||||||     
T  41174474 ttattatgttaatatgctaactttttaaaaaccatttcatagtgtccctaaattaaaaatgaaaactaaaccatcccctcccttcccctcctaaaccctc 41174573  T
Q  101 aatccaaacacaccctta 118  Q
     |||||||||||||||||    
T  41174574 catccaaacacaccctta 41174591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 27735874 - 27735987
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||| ||||| | |||||||||||| | ||||||| ||||||||||||||||||  ||||||  |||||||||||||||||||||||     
T  27735874 ttatcatgttaatatgctaactctttaaaaaacattttatagtgtccgtaatttaaaaatgaaaaatgaaccctatcctcccttcccctcctaaaccctc 27735973  T
Q  101 aatccaaacacacc 114  Q
     |||||||||||||    
T  27735974 catccaaacacacc 27735987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 31348436 - 31348316
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctc-----ctaaa 95  Q
    ||||||||||||||||||| |||| |||||||||||||| ||||||| |||||||||||||||||  ||||||| |||||||||||||||     |||||    
T  31348436 ttatcatgttaatatgttagctttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaacccttccctcccttcccctcataaactaaa 31348337  T
Q  96 cccttaatccaaacacaccct 116  Q
    ||||  |||||||||||||||    
T  31348336 ccctccatccaaacacaccct 31348316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 56135838 - 56135746
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    ||||||||||| ||| ||| | |||||||||||  |||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  56135838 aaaaaacattttacattgttcgtaatttaaaaaataaaaatgaaccctcccctcccttcccctcctaaaccctcaatccaaacacacccttag 56135746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 118
Target Start/End: Complemental strand, 29993865 - 29993769
Alignment:
Q  22 tttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||||||||| ||||| | ||||||| ||||||||||| ||||||| |  ||||| ||| |||||||||||||||||||||||||||||||| ||||    
T  29993865 tttctaaaaatcattttatagtgtccgtaatttaaaaaagaaaaacgagtcctccactcacttcccctcctaaacccttaatccaaacacactctta 29993769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 5730945 - 5730830
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||| |  |||||| |||| | || |||| ||||||||||||||||   |||||||||| || ||| ||||||||||||||     
T  5730945 ttatcatgttaatatgttaactcttcaaaaaatattttatagggtccgtaatttaaaaatgaaatctaaaccctcccatctctttccctcctaaaccctc 5730846  T
Q  101 aatccaaacacaccct 116  Q
     |||||||||||||||    
T  5730845 catccaaacacaccct 5730830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 26167004 - 26166937
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||||| ||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||    
T  26167004 taatttaaaaaagaaaaacaaactctcccctccattcccctcctaaaccctcaatccaaacacaccct 26166937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 37711292 - 37711367
Alignment:
Q  41 agtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||| ||||||||||||||||   ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  37711292 agtgtccgtaatttaaaaatgaaatctaaaccctcccctcccttcccctcctaaaccctccatccaaacacaccct 37711367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 1968531 - 1968605
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||| |||||||||||||||||  |||| || |||||||||||||||||||||||| ||||||||||||||||||    
T  1968531 gtccgtaatttaaaaatgaaaattaaactcttccctcccttcccctcctaaaccctcaatccaaacacaccctta 1968605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 31348500 - 31348568
Alignment:
Q  51 atttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    ||||||||| |||||  ||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  31348500 atttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaactctcaatccaaacacacccttag 31348568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 34110934 - 34111013
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcc 81  Q
    |||||||||||||||||||||||| |||||||||||||||||| | | |||||||||||| ||||  ||||||||||||||    
T  34110934 ttatcatgttaatatgttaactttttaaaaaacatttcacagtat-cgtaatttaaaaataaaaagtaaaccctcccctcc 34111013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 6891489 - 6891584
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaac 96  Q
    |||| |||||| ||| |||| ||| | ||||||| |||| ||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||||    
T  6891489 ttataatgttattattttaatttttttaaaaacaattcatagtgtccataatttaaaaacgaaaatcaaactctcccctctcttcccctcctaaac 6891584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 17938222 - 17938115
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    ||||||||||| ||| |||| ||| ||||||||||| || | ||||||||||||||||| |||||  |||| || |||||| |||||||||||||||||     
T  17938222 ttatcatgttattattttaaatttttaaaaaacattccataatgtccataatttaaaaacgaaaattaaactcttccctccattcccctcctaaaccctc 17938123  T
Q  101 aatccaaa 108  Q
     |||||||    
T  17938122 catccaaa 17938115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 35248815 - 35248922
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||| |||||||||  |||||| |||    |||||||||||||||||| ||||||  |||||||||||||||| || ||||||||||||     
T  35248815 ttatcatgttaatacgttaacttttaaaaaaatattcttgagtgtccataatttaaaattgaaaagtaaaccctcccctccctacctctcctaaaccctc 35248914  T
Q  101 aatccaaa 108  Q
     |||||||    
T  35248915 catccaaa 35248922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 37711215 - 37711136
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttccc-----ctcctaaacccttaatccaaacacaccctta 118  Q
    |||| ||||||||||| |||||||||||||||||||||||||||     |||||||||||| ||||||||||||||||||    
T  37711215 gtccgtaatttaaaaaagaaaaacaaaccctcccctcccttcccttcccctcctaaaccctcaatccaaacacaccctta 37711136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 50 - 113
Target Start/End: Original strand, 46007879 - 46007942
Alignment:
Q  50 aatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacac 113  Q
    |||||||||| |||||  |||||||||||||||||||||||||||||||| |||||||||||||    
T  46007879 aatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 46007942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 1968433 - 1968351
Alignment:
Q  34 atttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||||| |||||||||||||||| | ||||||  ||||||||||||||||| |||||  ||||||||||||||||| ||||||    
T  1968433 atttcatagtgtccataatttaatattgaaaagtaaaccctcccctccctttccctctcaaacccttaatccaaacgcaccct 1968351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 24565461 - 24565343
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||| ||||||| ||||||||| |||||| ||||||  | | ||| |||||||||||||||||  |||||||||||   |||||| ||||||||| |     
T  24565461 ttatcacgttaataagttaactttttaaaaagcatttcgtaatatccgtaatttaaaaatgaaaagtaaaccctccccagtcttcccttcctaaaccttc 24565362  T
Q  101 aatccaaacacacccttag 119  Q
     ||||||||||||||||||    
T  24565361 catccaaacacacccttag 24565343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 37761614 - 37761708
Alignment:
Q  22 tttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||||||||| ||||||| | ||||||||||||||||| |||||  || |||||||||||||||||||  |||| |||  |||||||||||||||    
T  37761614 tttctaaaaatcatttcataatgtccataatttaaaaaagaaaaggaagccctcccctcccttccccttttaaatcctccatccaaacacaccct 37761708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 54935135 - 54935065
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccc-tcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    ||||||||||| |||||  ||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  54935135 taatttaaaaaagaaaagtaaaccctccccctcccttcccctcctaaaccctcaatccaaacacaccctta 54935065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 54320501 - 54320433
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    ||||||||||| ||||| ||||||||||| |||||| |||||||||||||| ||||||||||||||||||    
T  54320501 taatttaaaaaagaaaatcaaaccctccc-tccctttccctcctaaaccctcaatccaaacacaccctta 54320433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 49735688 - 49735736
Alignment:
Q  68 aaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  49735688 aaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 49735736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 6938394 - 6938493
Alignment:
Q  19 aactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||||| |||||||||||| | | | ||| |||||||||||||||||   ||||||||||||| |||||||| |||||| |  |||||||||||||||||    
T  6938394 aactttttaaaaaacattttataatatccgtaatttaaaaatgaaaagtgaaccctcccctccattcccctcataaaccttccatccaaacacaccctta 6938493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 7977652 - 7977748
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttagagaa 123  Q
    ||||||||||| ||| | | | |||||||||||  ||||   ||||||||||||| |||||||| |||||||| |||||||||||||||||| ||||    
T  7977652 aaaaaacattttacattcttcgtaatttaaaaaataaaattgaaccctcccctcctttcccctcataaaccctcaatccaaacacacccttaaagaa 7977748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 27735817 - 27735749
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacaca 112  Q
    |||| |||||||||||||||||  |||||||| | |||||||||||||||||||||  |||||||||||    
T  27735817 gtccgtaatttaaaaatgaaaattaaaccctctcttcccttcccctcctaaaccctcgatccaaacaca 27735749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 5731022 - 5731077
Alignment:
Q  63 aaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    ||||||||| ||||||||||||||||||||||||||| ||| ||||||||| ||||    
T  5731022 aaaacaaactctcccctcccttcccctcctaaaccctcaattcaaacacactctta 5731077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 21695059 - 21695134
Alignment:
Q  43 tgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    ||||||||||||||||  |||||  ||||||||| || |||||||||| |||||||  ||||||||||||||||||    
T  21695059 tgtccataatttaaaatagaaaagtaaaccctccgcttccttcccctcataaacccccaatccaaacacaccctta 21695134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 47433886 - 47433953
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||||| |||||  ||||||||| |||||||||||||||||||| | || |||||||||||||    
T  47433886 taatttaaaaaagaaaagtaaaccctcctctcccttcccctcctaaaccgtcaacccaaacacaccct 47433953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 47846211 - 47846298
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacc 114  Q
    |||||||| || ||| ||| |||||||||||||  ||||  |||||||||| ||||||| |||| |||||||| ||||||||||||||    
T  47846211 aaaaaacactttacattgttcataatttaaaaaataaaagtaaaccctcccatcccttctcctcttaaaccctcaatccaaacacacc 47846298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 16400929 - 16400987
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaa 59  Q
    |||||||||||||||||||||||| ||||||  |||||| ||||||| |||||||||||    
T  16400929 ttatcatgttaatatgttaactttttaaaaactatttcatagtgtccctaatttaaaaa 16400987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 21694980 - 21694907
Alignment:
Q  26 taaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccct 99  Q
    |||||| ||||| | ||||||| ||||||||||| |||||  || ||||||| |||||||||||||||||||||    
T  21694980 taaaaaccattttatagtgtccgtaatttaaaaaagaaaagtaagccctcccgtcccttcccctcctaaaccct 21694907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 121
Target Start/End: Complemental strand, 44145817 - 44145768
Alignment:
Q  72 cctcccctcccttcccctcctaaacccttaatccaaacacacccttagag 121  Q
    |||||||||||||||||||||||||| | |||||||||||||||| ||||    
T  44145817 cctcccctcccttcccctcctaaaccttgaatccaaacacaccctaagag 44145768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 54576421 - 54576324
Alignment:
Q  22 tttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    |||||| ||| ||||| | | ||||| |||| |||||| |||||  || ||||||||||||||||||| |||||||||  ||||||||||||| ||||    
T  54576421 tttctataaatcattttataatgtccgtaatctaaaaaagaaaagtaagccctcccctcccttccccttctaaaccctccatccaaacacacctttag 54576324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 29798422 - 29798478
Alignment:
Q  9 ttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaa 65  Q
    |||| ||||||| ||| |||||||||||||| ||||||| |||||||||||||||||    
T  29798422 ttaacatgttaattttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaa 29798478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 36151705 - 36151768
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaa 65  Q
    |||||||||||||||||||||||| |||||| |||||   ||||| |||||||||||||||||||    
T  36151705 ttatcatgttaatatgttaacttt-taaaaatcattttctagtgttcataatttaaaaatgaaaa 36151768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 45132616 - 45132514
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaa-----atgaaaaacaaaccctcccctcccttcccctcctaaa 95  Q
    ||||||| |||||||||||||||| | |||||||||||  ||||| ||||||||||||     |||||||  ||||| ||||||| ||||| ||||||||    
T  45132616 ttatcattttaatatgttaacttt-ttaaaaacatttcgtagtgtacataatttaaaaagattatgaaaagtaaaccatcccctctcttccgctcctaaa 45132518  T
Q  96 ccct 99  Q
    ||||    
T  45132517 ccct 45132514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 75 - 118
Target Start/End: Complemental strand, 53260759 - 53260716
Alignment:
Q  75 cccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||||||||||||||||||||||||  |||||||||||||||||    
T  53260759 cccctcccttcccctcctaaaccctccatccaaacacaccctta 53260716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 6938353 - 6938287
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaaca 110  Q
    |||| ||||||||||| |||||| ||| |||| ||||||||||||||||||| | | ||||||||||    
T  6938353 gtccgtaatttaaaaaggaaaaataaatcctctcctcccttcccctcctaaatcatcaatccaaaca 6938287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 46007816 - 46007734
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaa-cattt-cacagtgtccataatttaaaaatgaaaaacaaaccctcccctcc 81  Q
    |||||||||||||||||||||||| ||||||| ||||| ||   ||||  |||||||||||||||||  ||||||||||||||    
T  46007816 ttatcatgttaatatgttaactttttaaaaaaacattttcattatgtcggtaatttaaaaatgaaaagtaaaccctcccctcc 46007734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 2247978 - 2248043
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacc 114  Q
    ||||||||||| |||||  |||| ||||| || |||| ||||||||||||| ||||||||||||||    
T  2247978 taatttaaaaaagaaaagtaaactctcccttcacttctcctcctaaaccctcaatccaaacacacc 2248043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 54576484 - 54576573
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||||| ||  ||| | |||||||||||| ||||   ||| || | ||||||||| ||| |||||||||||||||||||||||||    
T  54576484 aaaaaacattttacgttgttcgtaatttaaaaattaaaagtgaactcttctctcccttcctctcttaaacccttaatccaaacacaccct 54576573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 113
Target Start/End: Complemental strand, 4437496 - 4437428
Alignment:
Q  45 tccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacac 113  Q
    ||||||||||||||| |||||| ||  | ||||||||||| || |||||||||||  ||||||||||||    
T  4437496 tccataatttaaaaaagaaaaataagtcatcccctccctttccatcctaaaccctccatccaaacacac 4437428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 26167066 - 26167118
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatt 53  Q
    |||||||||||||||||||||| |  ||||||||||||| ||||||| |||||    
T  26167066 ttatcatgttaatatgttaactcttaaaaaaacatttcaaagtgtccgtaatt 26167118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 45132667 - 45132739
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||| ||||||||||| |||||  ||||| || |||| ||||||||||||||| || ||| ||||||||||||    
T  45132667 gtccgtaatttaaaaaagaaaagtaaaccatctcctctcttcccctcctaaactctcaattcaaacacaccct 45132739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 22186786 - 22186719
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||||||||||| ||||   ||| || |||||||||||| ||||||||||| |||||||| |||||||    
T  22186786 taatttaaaaattaaaagtgaactctgccctcccttcccttcctaaaccctcaatccaaatacaccct 22186719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 118
Target Start/End: Original strand, 29993926 - 29994017
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    ||||||| ||| ||| ||| | |||||||||||  ||||   ||||||||||||| || |||||||||| |||||||| |||| ||||||||    
T  29993926 aaaaaactttttacattgttcgtaatttaaaaagtaaaagtgaaccctcccctccatttccctcctaaatccttaatctaaactcaccctta 29994017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 47846418 - 47846505
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacc 114  Q
    |||||||| || ||| ||| |||||||||||||  ||||  ||||| |||  ||||||| |||| |||||||| ||||||||||||||    
T  47846418 aaaaaacactttacattgttcataatttaaaaaataaaagtaaaccttcctttcccttctcctcttaaaccctcaatccaaacacacc 47846505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 55080668 - 55080581
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacc 114  Q
    ||||||||||| ||| ||| | ||||||| |||  |||||  |||| || |||| ||||| |||||||||||| ||||||||||||||    
T  55080668 aaaaaacattttacattgttcgtaatttacaaaataaaaatgaaccatctcctctcttcctctcctaaaccctcaatccaaacacacc 55080581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 17938285 - 17938355
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    ||||||||||| |||||  |||| |||  ||||||||||||||||||  || |||||||||| ||||||||    
T  17938285 taatttaaaaaagaaaagtaaactctcatctcccttcccctcctaaattctcaatccaaacatacccttag 17938355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 34110864 - 34110803
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacac 111  Q
    |||||||||||||| |||  |||  ||||||| |||||||||||||||||| |||||||||||    
T  34110864 taatttaaaaatgagaaattaaca-tcccctctcttcccctcctaaaccctcaatccaaacac 34110803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 109
Target Start/End: Complemental strand, 35565603 - 35565565
Alignment:
Q  71 ccctcccctcccttcccctcctaaacccttaatccaaac 109  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  35565603 ccctcccctcccttcccctgctaaaccctcaatccaaac 35565565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 51329863 - 51329793
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    |||||||||||| ||||   ||| |||| ||  ||||||||||||||| || |||||||||||||||||||    
T  51329863 taatttaaaaattaaaattgaactctcctctttcttcccctcctaaactctcaatccaaacacacccttag 51329793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 5825046 - 5825143
Alignment:
Q  22 tttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    |||||||||| ||||| | | ||||  ||||| ||||| |||||  ||| |||| || | ||||| ||||||||||||  ||||||||||||||||||    
T  5825046 tttctaaaaatcattttataatgtctgtaattcaaaaaagaaaagtaaatcctctccccacttcctctcctaaaccctccatccaaacacacccttag 5825143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 16400844 - 16400803
Alignment:
Q  72 cctcccctcccttcccctcctaaacccttaatccaaacacac 113  Q
    |||||||||||||| ||||||||||||| ||||||| |||||    
T  16400844 cctcccctcccttctcctcctaaaccctcaatccaatcacac 16400803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 29798355 - 29798286
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||||||||||  ||||  ||||  ||| ||| |||||||||||||||| | ||||||||||||||||||    
T  29798355 taatttaaaaaataaaagtaaactatcctctctcttcccctcctaaaccatcaatccaaacacaccctta 29798286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 37761532 - 37761463
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||||||||||| ||||   ||| || |||||| ||| |||||||||| || ||||||||||||||||||    
T  37761532 taatttaaaaattaaaagtgaactctaccctcctttctcctcctaaactctcaatccaaacacaccctta 37761463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 116
Target Start/End: Complemental strand, 45741923 - 45741890
Alignment:
Q  83 ttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||||||||||| ||||||||||||||||    
T  45741923 ttcccctcctaaaccctcaatccaaacacaccct 45741890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 2247918 - 2247842
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctccc 77  Q
    ||||||| |||||| |||||  || ||| |||||||| | | ||||| ||||||||||||||||||  |||||||||    
T  2247918 ttatcatattaataagttaagattttaataaacattttataatgtccgtaatttaaaaatgaaaaatgaaccctccc 2247842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 17182685 - 17182729
Alignment:
Q  72 cctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||||| ||| |||||||| |||||||| ||||||||||||||||    
T  17182685 cctcccttcctttcccctcataaaccctcaatccaaacacaccct 17182729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 116
Target Start/End: Complemental strand, 41174388 - 41174356
Alignment:
Q  84 tcccctcctaaacccttaatccaaacacaccct 116  Q
    |||||||||||||||| ||||||||||||||||    
T  41174388 tcccctcctaaaccctcaatccaaacacaccct 41174356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 47433819 - 47433751
Alignment:
Q  6 atgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccct 74  Q
    |||||| ||| |||| ||| ||||||||||| || | ||||||||||||||||| |||||  |||||||    
T  47433819 atgttattattttaattttttaaaaaacattccataatgtccataatttaaaaacgaaaattaaaccct 47433751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 47694433 - 47694349
Alignment:
Q  33 catttcacagtgtccataatttaaaaatgaaaaacaaa-ccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||| ||||||| ||||||||||  ||||||  || |||||||||||||||| |||| ||| |||  ||||||||| |||||    
T  47694433 catttcatagtgtccgtaatttaaaagagaaaaagtaagccctcccctcccttccgctccaaaatcctccatccaaacataccct 47694349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 49735658 - 49735694
Alignment:
Q  63 aaaacaaaccctcccctcccttcccctcctaaaccct 99  Q
    ||||| || ||||||||||||||||||||||||||||    
T  49735658 aaaactaaacctcccctcccttcccctcctaaaccct 49735694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 2e-38; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 9721245 - 9721136
Alignment:
Q  9 ttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaa 108  Q
    |||||||||||||||| ||||||||||| || ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  9721245 ttaatatgttaactttttaaaaaacattccatagtgtccgtaatttaaaaatgaaaaataaaccctcccctcccttcccctcctaaaccttcaatccaaa 9721146  T
Q  109 cacaccctta 118  Q
    ||||||||||    
T  9721145 cacaccctta 9721136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 9719138 - 9719029
Alignment:
Q  9 ttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaa 108  Q
    |||||||||||||||| ||||||||||| || ||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||    
T  9719138 ttaatatgttaactttttaaaaaacattccatagtgtccgtaatttaaaaatgaaaaataaatcctcccctcccttcccctcctaaaccctcaatccaaa 9719039  T
Q  109 cacaccctta 118  Q
    ||||| ||||    
T  9719038 cacacgctta 9719029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 10818345 - 10818459
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    ||||||||||||||||||||  || |||||||||||||| ||||||| |||||||||||||||||  |||||||||||||||| |||||||||||| ||     
T  10818345 ttatcatgttaatatgttaatattttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctccctacccctcctaaactctc 10818444  T
Q  101 aatccaaacacaccc 115  Q
    |||||||||||||||    
T  10818445 aatccaaacacaccc 10818459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 1390448 - 1390561
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||||  |||||||||||||||||  ||| || | ||||| ||||||||||||||||||    
T  1390448 ttatcatgttaatatgttaactttttaaaaaatatttcatagtgtcagtaatttaaaaatgaaaagtaaaacccctcctccattcccctcctaaaccctt 1390547  T
Q  101 aatccaaacacacc 114  Q
     |||||||||||||    
T  1390548 catccaaacacacc 1390561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 44 - 121
Target Start/End: Complemental strand, 14515545 - 14515468
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttagag 121  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14515545 gtccgtaatttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacacccttagag 14515468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 30487420 - 30487304
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||| ||||| ||||| |||||||| | ||||| |||||||| ||||||||   |||||||||||||||||||||||||||||||     
T  30487420 ttatcatgttaatatgttgactttttaaaagacatttcatactgtcc-taatttaacaatgaaaagtgaaccctcccctcccttcccctcctaaaccctc 30487322  T
Q  101 aatccaaacacaccctta 118  Q
     |||||||||||||||||    
T  30487321 catccaaacacaccctta 30487304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 665956 - 665839
Alignment:
Q  1 ttatcatgttaatatgttaac-tttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccct 99  Q
    ||||||||||||||||||||  ||| ||||| |||||||| | | | ||||||||||||||||||||  |||||||||||| |||||||||||||||||     
T  665956 ttatcatgttaatatgttaaaatttttaaaagacatttcataatattcataatttaaaaatgaaaaatgaaccctcccctcacttcccctcctaaaccc- 665858  T
Q  100 taatccaaacacaccctta 118  Q
    | |||||||||||||||||    
T  665857 tcatccaaacacaccctta 665839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 14515600 - 14515715
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||| ||||||||||| |  |||||| |||| | ||||| ||||||||||||||||||   |||||||||| | |||||||||||||||||||     
T  14515600 ttatcatgttcatatgttaactcttcaaaaaatattttatagtgttcataatttaaaaatgaaatctaaaccctccctttccttcccctcctaaaccctc 14515699  T
Q  101 aatccaaacacaccct 116  Q
     |||||||||||||||    
T  14515700 catccaaacacaccct 14515715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 33236080 - 33236197
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||||| |||||||||||||||||  || | ||||||||| |||| ||| ||||| ||     
T  33236080 ttatcatgttaatatgttaactttttaaaaaa-atttcatagtgtccgtaatttaaaaatgaaaagtaatctctcccctcctttcctctcataaactctc 33236178  T
Q  101 aatccaaacacacccttag 119  Q
     ||||||| ||||||||||    
T  33236179 catccaaatacacccttag 33236197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 1300749 - 1300866
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||| ||||||||||||||||| || |||| |||||| | ||||| |||||||||||||||||  |||||||||||||| |||  || | |||||||     
T  1300749 ttatcaggttaatatgttaactttttataaaatatttcatattgtccgtaatttaaaaatgaaaagtaaaccctcccctccattcatcttccaaaccctc 1300848  T
Q  101 aatccaaacacaccctta 118  Q
     |||||||||||||||||    
T  1300849 catccaaacacaccctta 1300866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 21606959 - 21606879
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcc 81  Q
    |||||||||||||||||||||||| || ||||||||||| ||| ||| |||||||||||||||||  ||||||||||||||    
T  21606959 ttatcatgttaatatgttaactttttataaaacatttcatagtttccgtaatttaaaaatgaaaagtaaaccctcccctcc 21606879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 10818302 - 10818227
Alignment:
Q  43 tgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    ||||| ||||||||||| |||||| ||||  |||||||||||||||||||||||||| ||||||||||||||||||    
T  10818302 tgtccgtaatttaaaaaagaaaaataaacaatcccctcccttcccctcctaaaccctcaatccaaacacaccctta 10818227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 5585417 - 5585304
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaa-caaaccctcccctcccttcccctcctaaaccct 99  Q
    |||| |||||||||||||| |||| |||||||||||||| ||||| | ||||||||||| ||||||  |||| || || | |||||||||||||||||||    
T  5585417 ttattatgttaatatgttacctttttaaaaaacatttcatagtgttcgtaatttaaaaaagaaaaagtaaactcttccattccttcccctcctaaaccct 5585318  T
Q  100 taatccaaacacac 113  Q
      ||||||||||||    
T  5585317 ccatccaaacacac 5585304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 4097627 - 4097563
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaa 65  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||| ||||    
T  4097627 ttatcatgttaatatgttaactttttaaaaaacatttcaaagtgtccgtaatttaaaaattaaaa 4097563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 33041591 - 33041671
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcc 81  Q
    |||||||||||||||||||||||| |||||||||||||| ||| ||| |||||||||||| ||||| ||| | ||||||||    
T  33041591 ttatcatgttaatatgttaactttttaaaaaacatttcatagtatccgtaatttaaaaataaaaaataaatcttcccctcc 33041671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 9298625 - 9298735
Alignment:
Q  12 atatgttaactttctaaaa-aacatttcacagtgtccataatttaaaaatgaaaaacaaa-----ccctcccctcccttcccctcctaaacccttaatcc 105  Q
    ||||||||||||| ||||| ||||||||| | ||||| |||||||||| ||||||  |||     |||||||||||||||||||||||| ||||| ||||    
T  9298625 atatgttaactttttaaaaaaacatttcataatgtccgtaatttaaaattgaaaagtaaaccctcccctcccctcccttcccctcctaaccccttcatcc 9298724  T
Q  106 aaacacaccct 116  Q
    |||||||||||    
T  9298725 aaacacaccct 9298735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 34176464 - 34176576
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||| |||||||||||||||||||  |||||| |||||| ||||||| |||||||||||||||||  |||| |||  ||| ||| ||||| ||||||||     
T  34176464 ttattatgttaatatgttaactttaaaaaaaatatttcatagtgtccgtaatttaaaaatgaaaactaaactctcatctctctt-ccctcataaaccctc 34176562  T
Q  101 aatccaaacacacc 114  Q
     |||||||||||||    
T  34176563 catccaaacacacc 34176576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 2900039 - 2900103
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaa 65  Q
    |||||||||||||||||||||||  || ||||||||||| |||||| ||||||||||||||||||    
T  2900039 ttatcatgttaatatgttaacttcttataaaacatttcatagtgtctataatttaaaaatgaaaa 2900103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 19278138 - 19278039
Alignment:
Q  12 atatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacac 111  Q
    |||||| |||||| ||||||| |||| | ||||||  |||||||||||||||||  |||| ||| ||| |||||||||||||||||||  ||||||||||    
T  19278138 atatgtcaactttttaaaaaatattttatagtgtcagtaatttaaaaatgaaaagtaaactctctccttccttcccctcctaaaccctccatccaaacac 19278039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 16738110 - 16737997
Alignment:
Q  2 tatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctta 101  Q
    |||||||||| ||| |||| ||   ||||||||||||| ||| ||||||||||||||| |||||  ||| | ||||||| ||||| ||| ||||||||      
T  16738110 tatcatgttattattttaatttatcaaaaaacatttcatagtttccataatttaaaaacgaaaagtaaatcttcccctctcttcctctcttaaaccctcc 16738011  T
Q  102 atccaaacacaccc 115  Q
    ||||||||||||||    
T  16738010 atccaaacacaccc 16737997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 19278210 - 19278278
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacac 113  Q
    |||| ||||||||||| |||||  ||||||||||||||||||||||||||||| || |||||||||||||    
T  19278210 gtccgtaatttaaaaaagaaaat-aaaccctcccctcccttcccctcctaaactctcaatccaaacacac 19278278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 31849239 - 31849319
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcc 81  Q
    |||||| ||||||||||||| ||| ||||| |||||| | ||||||| |||||||||||||||||   |||||||||||||    
T  31849239 ttatcacgttaatatgttaattttttaaaagacattttatagtgtccgtaatttaaaaatgaaaagtgaaccctcccctcc 31849319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 23091040 - 23090993
Alignment:
Q  71 ccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||    
T  23091040 ccctcccctcccttcccctcctaaaccttcaatccaaacacaccctta 23090993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 123
Target Start/End: Complemental strand, 31849174 - 31849103
Alignment:
Q  52 tttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttagagaa 123  Q
    |||||||| |||||  ||||||||||||||||||||||| |||||||| ||||| ||||||| || ||||||    
T  31849174 tttaaaaaagaaaactaaaccctcccctcccttcccctcttaaaccctcaatcctaacacactctaagagaa 31849103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 4097684 - 4097754
Alignment:
Q  43 tgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacac 113  Q
    ||||| ||||||||||| |||||   |||||| ||||||||||||||| |||||||| |||||||||||||    
T  4097684 tgtccgtaatttaaaaaagaaaagtgaacccttccctcccttcccctcttaaaccctcaatccaaacacac 4097754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 15353458 - 15353364
Alignment:
Q  22 tttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||| ||||||||||| ||| ||| | |||||||||||  ||||   | | ||| ||||||||||||||||||||||| ||||||||||||||||    
T  15353458 tttcaaaaaaacattttacattgttcgtaatttaaaaaataaaagtgagcgctctcctcccttcccctcctaaaccctcaatccaaacacaccct 15353364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 9719208 - 9719273
Alignment:
Q  50 aatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccc 115  Q
    |||||||||| |||||  |||||| |||||| ||||||||| |||||||| |||||||||||||||    
T  9719208 aatttaaaaaagaaaattaaacccacccctctcttcccctcataaaccctcaatccaaacacaccc 9719273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 113
Target Start/End: Complemental strand, 33041538 - 33041473
Alignment:
Q  48 ataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacac 113  Q
    ||||||||||||||||||| |||  ||||||||| |||| |||||||||||  |||||||||||||    
T  33041538 ataatttaaaaatgaaaaataaattctcccctcctttcctctcctaaacccccaatccaaacacac 33041473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 81 - 121
Target Start/End: Complemental strand, 4097270 - 4097230
Alignment:
Q  81 ccttcccctcctaaacccttaatccaaacacacccttagag 121  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  4097270 ccttcccctcctaaaccctcaatccaaacacacccttagag 4097230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 118
Target Start/End: Original strand, 9051734 - 9051778
Alignment:
Q  74 tcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||    
T  9051734 tcccctcccttcccctcttaaaccctcaatccaaacacaccctta 9051778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 12811157 - 12811224
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||| | |||||  || |||||||||| |||||| ||||||||||| ||||||||||||||||    
T  12811157 taatttaaagaagaaaagtaatccctcccctctcttcccatcctaaaccctcaatccaaacacaccct 12811224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 77 - 116
Target Start/End: Complemental strand, 15323264 - 15323225
Alignment:
Q  77 cctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  15323264 cctcccttcccctcctaaaccctcaatccaaacacaccct 15323225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 120
Target Start/End: Original strand, 3841296 - 3841334
Alignment:
Q  82 cttcccctcctaaacccttaatccaaacacacccttaga 120  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  3841296 cttcccctcctaaacccttcatccaaacacacccttaga 3841334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 16738173 - 16738241
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    ||||||||||| |||||  |||| ||||||||| ||||| ||||||||||| |||||||||| |||||||    
T  16738173 taatttaaaaaagaaaagtaaactctcccctcc-ttcccatcctaaaccctcaatccaaacaaaccctta 16738241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 30487501 - 30487546
Alignment:
Q  68 aaaccctcccctcccttcccctcctaaacccttaatccaaacacac 113  Q
    ||||||||| |||||||||||||||||||||| |||| ||||||||    
T  30487501 aaaccctccactcccttcccctcctaaaccctcaatcgaaacacac 30487546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 1395765 - 1395829
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaa 65  Q
    |||||||| ||||||||||| ||| |||||||||||  |||||||   |||||||||||||||||    
T  1395765 ttatcatgctaatatgttaattttttaaaaaacattctacagtgttagtaatttaaaaatgaaaa 1395829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 26318478 - 26318546
Alignment:
Q  45 tccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacac 113  Q
    ||||||||||||||| |||||  ||| | ||||||||||| ||||||||||| ||  ||||||||||||    
T  26318478 tccataatttaaaaaagaaaagtaaatcttcccctccctttccctcctaaactctccatccaaacacac 26318546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 121
Target Start/End: Complemental strand, 1300661 - 1300624
Alignment:
Q  84 tcccctcctaaacccttaatccaaacacacccttagag 121  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  1300661 tcccctcctaaaccctcaatccaaacacaccctaagag 1300624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 10293449 - 10293493
Alignment:
Q  73 ctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    ||||||||||||| |||||||||||||| ||||||| |||||||||    
T  10293449 ctcccctcccttctcctcctaaacccttcatccaaa-acaccctta 10293493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 23091158 - 23091195
Alignment:
Q  71 ccctcccctcccttcccctcctaaacccttaatccaaa 108  Q
    |||||||||||||||||||||||||||||  |||||||    
T  23091158 ccctcccctcccttcccctcctaaaccctccatccaaa 23091195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 4e-36; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 23748224 - 23748341
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||||| ||||| |||||||| ||||||| || ||||||||||||||   |||||||||||||||||||||||||||||||     
T  23748224 ttatcatgttaatatgttaactttttaaaagacatttcatagtgtccgtagtttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccctc 23748323  T
Q  101 aatccaaacacaccctta 118  Q
     |||||||||||||||||    
T  23748324 catccaaacacaccctta 23748341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 36046315 - 36046205
Alignment:
Q  5 catgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatc 104  Q
    |||||||||||||||||||| ||||||||||||   ||||||| |||||||||||||||||| |||| ||||||||  |||||||||||||||||  |||    
T  36046315 catgttaatatgttaactttttaaaaaacattttctagtgtccgtaatttaaaaatgaaaaataaactctcccctcatttcccctcctaaaccctccatc 36046216  T
Q  105 caaacacaccc 115  Q
    |||||||||||    
T  36046215 caaacacaccc 36046205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 9631689 - 9631806
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||||| ||||  ||||||||  |||||| ||||||||||| |||||   |||||||  ||||||| ||||||||||||||     
T  9631689 ttatcatgttaatatgttaactttttaaaggacatttcatggtgtccgtaatttaaaaacgaaaagttaaccctcttctccctttccctcctaaaccctc 9631788  T
Q  101 aatccaaacacaccctta 118  Q
     |||||||||||||||||    
T  9631789 catccaaacacaccctta 9631806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 17380010 - 17380087
Alignment:
Q  41 agtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    ||||||| ||||||||||||||||| |||||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  17380010 agtgtccgtaatttaaaaatgaaaatcaaaccatcccctcacttcccctcctaaaccctcaatccaaacacaccctta 17380087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 36347656 - 36347539
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||| | ||||||| || ||| ||| ||| |||| ||||||||||||   ||| ||| | ||||||||||||||||||||||    
T  36347656 ttatcatgttaatatgttaactatttaaaaaatatgtcatagtatccgtaatataaaaatgaaaagtgaactctctcttcccttcccctcctaaaccctt 36347557  T
Q  101 aatccaaacacaccctta 118  Q
     |||||||||||||||||    
T  36347556 catccaaacacaccctta 36347539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 8426981 - 8426899
Alignment:
Q  14 atgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaac 96  Q
    ||||||||||| |||||||||||||| ||||||| |||||||||||| ||||  |||||||||| ||||||||||||||||||    
T  8426981 atgttaactttttaaaaaacatttcatagtgtccttaatttaaaaattaaaagtaaaccctcccttcccttcccctcctaaac 8426899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 34209593 - 34209707
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||||| ||||||| |||||| |||||   |||||||||||||||||  || | || ||||||| |||| | ||||||||||    
T  34209593 ttatcatgttaatatgttaactttttaaaaaatatttcatagtgtttgtaatttaaaaatgaaaagtaatctcttccctcccctcccattctaaaccctt 34209692  T
Q  101 aatccaaacacaccc 115  Q
     ||||||||||||||    
T  34209693 catccaaacacaccc 34209707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 27 - 118
Target Start/End: Original strand, 2241573 - 2241664
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||||||||| || || ||||||||||||||||||||||| |||| ||||||| | |||||| ||||||||||| ||||||||||| |||||    
T  2241573 aaaaaacattccatagcgtccataatttaaaaatgaaaaataaactctccccttctttccccacctaaacccttcatccaaacacatcctta 2241664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 15224871 - 15224942
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttaga 120  Q
    ||||||||||| |||||  ||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  15224871 taatttaaaaaagaaaagtaaaccatcccctcccttcccctcctaaacccttgatccaaacacacccttaga 15224942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 15224809 - 15224732
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccc 78  Q
    ||||||||||||||||||| |||| |||||||||||||| ||||||| |||||||||||||||||  |||| ||||||    
T  15224809 ttatcatgttaatatgttagctttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaacactcccc 15224732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 22356175 - 22356248
Alignment:
Q  43 tgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||| ||||||||||| ||||||  ||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  22356175 tgtccgtaatttaaaaaagaaaaatgaaccctcccctcccttcccctcctaaatcctcaatccaaacacaccct 22356248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 39732844 - 39732764
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcc 81  Q
    |||||||||||||||||||||||| || ||||||||||| | ||| | |||||||||||||||||  ||||||||||||||    
T  39732844 ttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 39732764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 42813770 - 42813866
Alignment:
Q  22 tttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||||||||| ||||| | | ||| | ||||||||||| |||||| || || ||||||| ||||||||||||||||||| |||||||||||||||||    
T  42813770 tttctaaaaatcattttataatgttcgtaatttaaaaaagaaaaataagccatcccctctcttcccctcctaaacccttcatccaaacacaccctta 42813866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 17379901 - 17379846
Alignment:
Q  61 gaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17379901 gaaaatcaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 17379846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 35736341 - 35736435
Alignment:
Q  26 taaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttaga 120  Q
    |||||||| ||||| |||||||  |||||||||| |||||   | ||||||||||||||| |||||||||||||  |||||||||||||||||||    
T  35736341 taaaaaacttttcatagtgtccgaaatttaaaaacgaaaagtgagccctcccctcccttcacctcctaaaccctccatccaaacacacccttaga 35736435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 40022510 - 40022620
Alignment:
Q  10 taatatgttaactttctaaaa-aacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaa 108  Q
    ||||||||| ||||| ||||| ||||||||| ||||||  ||||||||||||||||   |||||||||||||||||| |||| ||||||||  ||||||     
T  40022510 taatatgtttactttttaaaaaaacatttcatagtgtctgtaatttaaaaatgaaatgtaaaccctcccctcccttctcctcttaaaccctccatccaag 40022609  T
Q  109 cacacccttag 119  Q
    |||||| ||||    
T  40022610 cacacctttag 40022620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 35736240 - 35736175
Alignment:
Q  51 atttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||| |||||  || ||||||||||||||||||||||||||||| ||||||||||||||||    
T  35736240 atttaaaaaagaaaattaacccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 35736175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 27 - 120
Target Start/End: Complemental strand, 41778862 - 41778769
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttaga 120  Q
    ||||||||||| | | |||||||||||||||    ||||  ||||||||||||||||| |||| ||||||||| ||||||||||||||||||||    
T  41778862 aaaaaacattttatactgtccataatttaaagtacaaaagtaaaccctcccctccctttcccttctaaaccctcaatccaaacacacccttaga 41778769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 49 - 121
Target Start/End: Complemental strand, 9427052 - 9426980
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttagag 121  Q
    ||||||||||| ||||| ||||||||| ||||||||||||||||||||  | |||||||||||||| ||||||    
T  9427052 taatttaaaaaagaaaatcaaaccctctcctcccttcccctcctaaactttcaatccaaacacaccattagag 9426980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 9427114 - 9427230
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaa-aacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccct 99  Q
    |||||||| ||||||| |||||||  |||| ||||||| | ||||||| ||||||||||||||||| |||||||| || |   || ||||||| ||||||    
T  9427114 ttatcatgctaatatgctaactttaaaaaaaaacattttatagtgtccgtaatttaaaaatgaaaatcaaacccttccgttagtttccctcctgaaccct 9427213  T
Q  100 taatccaaacacaccct 116  Q
     ||||||||||||||||    
T  9427214 caatccaaacacaccct 9427230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 36347713 - 36347785
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||| ||||||||||| |||||  |||| ||||| ||||||||||||||||||||| ||||||||||||||||    
T  36347713 gtccgtaatttaaaaaagaaaagtaaactctcccttcccttcccctcctaaaccctcaatccaaacacaccct 36347785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 41841749 - 41841684
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacc 114  Q
    ||||||||||| ||||| ||||||||||| |||||| |||||||||| ||| ||||||||||||||    
T  41841749 taatttaaaaaagaaaatcaaaccctcccatccctttccctcctaaatcctcaatccaaacacacc 41841684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 1583222 - 1583286
Alignment:
Q  17 ttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcc 81  Q
    |||||||| |||||||||||||| ||||||| |||||||||||||||||   |||||||||||||    
T  1583222 ttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtgaaccctcccctcc 1583286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 255 - 335
Target Start/End: Original strand, 23748847 - 23748927
Alignment:
Q  255 ctgtcatgagttgtatgccaatatggttgatgtttctgttttttacattagtcgtgcctgcaatgaggttgcgcctgagct 335  Q
    |||||| || |||||||||||||||| |||||||||||||||||  |||||||||| ||| ||| ||| ||||| ||||||    
T  23748847 ctgtcacgaattgtatgccaatatggctgatgtttctgttttttttattagtcgtgtctgaaataaggctgcgcatgagct 23748927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 31795858 - 31795766
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    ||||||| ||||| ||||||| ||||||||||| |||||  ||  |||||||||||||| |||| ||||||||  |||||||||||| |||||    
T  31795858 aaaaaacttttcatagtgtccgtaatttaaaaacgaaaagtaagtcctcccctcccttcacctcataaaccctccatccaaacacactcttag 31795766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 36566966 - 36566874
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaaca-tttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcct 92  Q
    |||||||||||||||||||||||| || |||| | ||||| | ||||| |||||||||||||||||  ||| |||| | ||||||||||||||    
T  36566966 ttatcatgttaatatgttaactttttataaaaaactttcataatgtccgtaatttaaaaatgaaaagtaaatcctctcatcccttcccctcct 36566874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 39821740 - 39821668
Alignment:
Q  45 tccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatc-caaacacaccct 116  Q
    |||||||||||||||||||||  |||||||||||||| || ||||| |||||||||||||  |||||||||||    
T  39821740 tccataatttaaaaatgaaaagtaaaccctcccctccatttccctcttaaacccttaatcaaaaacacaccct 39821668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 39821798 - 39821878
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcc 81  Q
    |||||||||||||||||||||| | |||| |  |||||| ||||||| ||||||||||| |||||  ||||||||||||||    
T  39821798 ttatcatgttaatatgttaactctttaaatattatttcatagtgtccgtaatttaaaaaagaaaactaaaccctcccctcc 39821878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 8427051 - 8427110
Alignment:
Q  52 tttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacac 111  Q
    ||||||||||||||  |||| |||||||||||| |||||||||||||| |||||||||||    
T  8427051 tttaaaaatgaaaagtaaactctcccctccctttccctcctaaaccctcaatccaaacac 8427110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 40022416 - 40022363
Alignment:
Q  62 aaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||    
T  40022416 aaaaacaaaccctcccc-cccttaccctcctaaaccctcaatccaaacacaccct 40022363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 17379941 - 17379994
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataattt 54  Q
    |||||||||||||||| ||||||| |||||||||||||| ||||||| ||||||    
T  17379941 ttatcatgttaatatgctaactttttaaaaaacatttcatagtgtccgtaattt 17379994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 42316879 - 42316815
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaa 65  Q
    |||||||||||||| ||||||||| |||||||||||||| |||||    ||||||||||||||||    
T  42316879 ttatcatgttaatacgttaactttttaaaaaacatttcatagtgtttgcaatttaaaaatgaaaa 42316815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 12751970 - 12752029
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcc 86  Q
    |||||| |||||| |||||||||||||| |||| ||||| |||||||||||||| |||||    
T  12751970 aaaaaatatttcatagtgtccataattttaaaacgaaaagcaaaccctcccctctcttcc 12752029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 35531852 - 35531903
Alignment:
Q  68 aaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    ||||||||||||||| |||||||||||| |||| ||||||||||||| ||||    
T  35531852 aaaccctcccctcccctcccctcctaaaaccttcatccaaacacacctttag 35531903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 42296480 - 42296547
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||||||||||  ||||   ||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  42296480 taatttaaaaaataaaagtgaaccctctcctcccttcccctcctaatccctcaatccaaacacaccct 42296547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 27926682 - 27926752
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaac 71  Q
    |||||||||||||||||||||||| |||  || |||| | ||| ||| |||||||||||||||||| ||||    
T  27926682 ttatcatgttaatatgttaactttttaaccaaaatttaatagtatccgtaatttaaaaatgaaaaataaac 27926752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 28262558 - 28262500
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaa 59  Q
    ||||||||||| ||| |||||||| ||||||| |||||| ||||| |||||||||||||    
T  28262558 ttatcatgttattatattaactttttaaaaaatatttcatagtgttcataatttaaaaa 28262500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 114
Target Start/End: Original strand, 36046401 - 36046443
Alignment:
Q  72 cctcccctcccttcccctcctaaacccttaatccaaacacacc 114  Q
    ||||||||||||||||||| |||||||| ||||||||||||||    
T  36046401 cctcccctcccttcccctcataaaccctcaatccaaacacacc 36046443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 34187642 - 34187573
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||||||||||| ||||   |||| |||||| |||||| ||||||||| || ||||||||||||||||||    
T  34187642 taatttaaaaattaaaagtgaaccttccccttccttccactcctaaactctcaatccaaacacaccctta 34187573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 887266 - 887353
Alignment:
Q  28 aaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||||||||| | ||  ||| ||||||||||| |||||  || | ||||||||||||||||||||||| |||| ||||| |||||||||    
T  887266 aaaaacattttatagcatccgtaatttaaaaaagaaaagtaagcgctcccctcccttcccctcctaaa-ccttcatccagacacaccct 887353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 1270433 - 1270525
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    ||||||||||| ||| ||| | |||||||||||  ||||   | ||||||||||||||  ||||||||| ||| ||||||||| |||||||||    
T  1270433 aaaaaacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttgtcctcctaaatcctcaatccaaacgcacccttag 1270525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 16565906 - 16565970
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaa 65  Q
    ||||||| || ||||||||||||| |||||||| ||||| ||| ||| |||||||||||| ||||    
T  16565906 ttatcatatttatatgttaactttttaaaaaacgtttcatagtatccgtaatttaaaaataaaaa 16565970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 17331478 - 17331406
Alignment:
Q  53 ttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttagagaact 125  Q
    ||||||| |||||  |||||||||||||| |||||||||| ||||||   | |||||||||||||||| ||||    
T  17331478 ttaaaaaagaaaagtaaaccctcccctcctttcccctccttaaccctctttgcaaacacacccttagaaaact 17331406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 19566936 - 19566820
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaa-catttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccct 99  Q
    ||||||| |||||||| ||||||| ||||||| ||||||| ||||||  |||||||||| ||| ||  |||||||||  || ||| |||| |||||| ||    
T  19566936 ttatcattttaatatgctaactttttaaaaaaacatttcatagtgtctgtaatttaaaactgagaagtaaaccctccattctctttcccttctaaacact 19566837  T
Q  100 taatccaaacacaccct 116  Q
       ||||||||||||||    
T  19566836 ccgtccaaacacaccct 19566820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 31061404 - 31061357
Alignment:
Q  71 ccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    ||||||| ||| ||||||||||||||| | ||||||||||||||||||    
T  31061404 ccctcccatcctttcccctcctaaaccttcaatccaaacacaccctta 31061357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 31061543 - 31061598
Alignment:
Q  55 aaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaaca 110  Q
    ||||| |||||  ||| |||||||||| ||||||||||||||||| ||||||||||    
T  31061543 aaaaaagaaaagtaaatcctcccctccattcccctcctaaaccctcaatccaaaca 31061598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 45257484 - 45257551
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||||| |||||  ||||| || ||||||||||| ||||||| |||  |||||||||||||||    
T  45257484 taatttaaaaaagaaaagtaaaccatctcctcccttcccatcctaaaacctccatccaaacacaccct 45257551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 3094555 - 3094601
Alignment:
Q  74 tcccctcccttcccctcctaaacccttaatccaaacacacccttaga 120  Q
    ||||||||||| || ||||||||||| |||||||||||||| |||||    
T  3094555 tcccctccctttccttcctaaaccctcaatccaaacacaccgttaga 3094601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 31928204 - 31928286
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaac 109  Q
    ||||||||||| ||| |||   |||||||||||| ||||   | ||||||| |||||||||||||||||||||  ||||||||    
T  31928204 aaaaaacattttacattgtttgtaatttaaaaattaaaagtgagccctcccttcccttcccctcctaaaccctcgatccaaac 31928286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 118
Target Start/End: Complemental strand, 45257351 - 45257305
Alignment:
Q  72 cctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||||| ||| |||||||||||||| || ||||||||||||||||||    
T  45257351 cctcccttcctttcccctcctaaactctcaatccaaacacaccctta 45257305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 7681386 - 7681488
Alignment:
Q  14 atgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacac 113  Q
    |||||||||||  |||||| |||||| | | |||  ||||||||||| ||||  ||||||||||  ||||||||| | ||||||||  ||||||||| ||    
T  7681386 atgttaacttttaaaaaaatatttcataatatccgcaatttaaaaataaaaagtaaaccctccc--cccttccccgcttaaaccctcgatccaaacaaac 7681483  T
Q  114 cctta 118  Q
    |||||    
T  7681484 cctta 7681488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 119
Target Start/End: Complemental strand, 12541808 - 12541767
Alignment:
Q  78 ctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    ||||| |||||||||||||||| ||||||||||||| |||||    
T  12541808 ctcccctcccctcctaaaccctcaatccaaacacactcttag 12541767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 886985 - 886918
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctt 117  Q
    ||||||||||| |||||  || ||||||| | ||||||||||||||||||| || || |||||||||||    
T  886985 taatttaaaaaagaaaagtaagccctcccttaccttcccctcctaaaccctcaa-cccaacacaccctt 886918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 123
Target Start/End: Complemental strand, 2381037 - 2380985
Alignment:
Q  72 cctcccctccc-ttcccctcctaaacccttaatccaaacacacccttagagaa 123  Q
    ||||||||||| |||||||||||||||||  ||||||||||| ||| ||||||    
T  2381037 cctcccctccccttcccctcctaaaccctctatccaaacacatcctaagagaa 2380985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 12541895 - 12541931
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacattt 37  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  12541895 ttatcatgttaatgtgttaactttttaaaaaacattt 12541931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 16713709 - 16713769
Alignment:
Q  56 aaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||| ||||||||| | ||| ||||||||||  |||||||||||  |||||||||||||||    
T  16713709 aaaaagaaaaacaagctctctcctcccttcctttcctaaaccctccatccaaacacaccct 16713769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 17334012 - 17334056
Alignment:
Q  72 cctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||||||| ||||||||||||||||||| ||| |||| |||||||    
T  17334012 cctccccttccttcccctcctaaaccctcaattcaaaaacaccct 17334056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 31795968 - 31796008
Alignment:
Q  76 ccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||||||||||||||||||||| | |||||||||| |||||    
T  31795968 ccctcccttcccctcctaaaccttcaatccaaacaaaccct 31796008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 2e-35; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 40095048 - 40094928
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    ||||||||||||| |||||||||| || ||||||||||| ||||||| |||||||||||||||||  |||||||||||| |||||||||||||||||||     
T  40095048 ttatcatgttaatttgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctccccttccttcccctcctaaaccctc 40094949  T
Q  101 aatccaaacacacccttagag 121  Q
     ||||||||||||||| ||||    
T  40094948 catccaaacacaccctaagag 40094928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 12234144 - 12234252
Alignment:
Q  6 atgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatcc 105  Q
    ||||||||||| ||||||| |||||||||||||  ||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||  ||||    
T  12234144 atgttaatatgctaactttataaaaaacatttcgtagtgtccgtaatttaaaaatgaaaactaaaccctcccctcccttcccctcctaaaccctccatcc 12234243  T
Q  106 aaacacacc 114  Q
    |||||||||    
T  12234244 aaacacacc 12234252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 30010461 - 30010579
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||| ||||||||||||||||| | |||||||||||||  ||||||| |||||| ||||||||||  |||||||||||||||||||||| |||||||||     
T  30010461 ttataatgttaatatgttaactatttaaaaaacatttcgtagtgtccgtaatttcaaaatgaaaagtaaaccctcccctcccttccccttctaaaccctc 30010560  T
Q  101 aatccaaacacacccttag 119  Q
     ||||||||||||||||||    
T  30010561 catccaaacacacccttag 30010579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 41498533 - 41498649
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctccctt-cccctcctaaaccct 99  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||| |||||||||||||||||  ||| ||||||||||||| |||||||||||| ||    
T  41498533 ttatcatgttaatatgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaatcctcccctcccttacccctcctaaactct 41498632  T
Q  100 taatccaaacacaccct 116  Q
      |||||||||||||||    
T  41498633 ccatccaaacacaccct 41498649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 8529932 - 8530046
Alignment:
Q  5 catgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatc 104  Q
    |||||||||||||||||||| ||||||| |||||| ||||||| |||||||||||||||||  ||||  || |||||||||||||||||||| ||| |||    
T  8529932 catgttaatatgttaactttttaaaaaatatttcatagtgtccgtaatttaaaaatgaaaagtaaactttcacctcccttcccctcctaaactcttcatc 8530031  T
Q  105 caaacacacccttag 119  Q
    |||||||| ||||||    
T  8530032 caaacacatccttag 8530046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 38510009 - 38509894
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    ||||| |||||| ||||||| ||| ||||| |||||||| ||||||| |||||||||||||||||   |||||||| ||||||||||||||||||||||     
T  38510009 ttatcgtgttaagatgttaattttttaaaagacatttcatagtgtccgtaatttaaaaatgaaaagtgaaccctcctctcccttcccctcctaaaccctc 38509910  T
Q  101 aatccaaacacaccct 116  Q
     |||||||||||||||    
T  38509909 tatccaaacacaccct 38509894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 20576246 - 20576136
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    ||||||||||||||| |||||| | ||||||||||||||  |||||| ||||||||||||||||   |||| |||||||||||||||||||||||||||     
T  20576246 ttatcatgttaatatattaactctttaaaaaacatttca--gtgtccgtaatttaaaaatgaaatctaaactctcccctcccttcccctcctaaaccctc 20576149  T
Q  101 aatccaaacacac 113  Q
     ||||||||||||    
T  20576148 tatccaaacacac 20576136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 7444624 - 7444743
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||| ||||||||||||||||||| |||||| ||||| | ||||||| |||||| ||||||||||  ||||||||||||| |||||| | |||||| |||    
T  7444624 ttattatgttaatatgttaactttttaaaaatcattttatagtgtccgtaattttaaaatgaaaactaaaccctcccctctcttccctttctaaactctt 7444723  T
Q  101 aatccaaacacacccttaga 120  Q
     |||||||||||| ||||||    
T  7444724 catccaaacacactcttaga 7444743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 35349577 - 35349464
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||||| || |||||||||  |||||||| |||||||||||||||||  ||||||||||  ||| ||||||| ||||||||     
T  35349577 ttatcatgttaatatgttaactttttataaaacattt--cagtgtccgtaatttaaaaatgaaaagtaaaccctccc--cccctcccctcttaaaccctc 35349482  T
Q  101 aatccaaacacaccctta 118  Q
     |||||||||||||||||    
T  35349481 catccaaacacaccctta 35349464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 2859035 - 2858932
Alignment:
Q  13 tatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacaca 112  Q
    |||||||||||| |||| ||||||||| || |||  ||||||| |||||||||  ||||||||||||||||| ||||||||||||||  |||||||||||    
T  2859035 tatgttaactttttaaataacatttcatagggtctgtaatttagaaatgaaaagtaaaccctcccctccctttccctcctaaaccctccatccaaacaca 2858936  T
Q  113 ccct 116  Q
    ||||    
T  2858935 ccct 2858932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 35349634 - 35349706
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||| ||||||||||| |||||  ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  35349634 gtccgtaatttaaaaacgaaaagtaaaccctcccctcccttcccctcataaacccttaatccaaacacaccct 35349706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 32951433 - 32951319
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||||| || |||||||||||  |||||| |||||||||||||||||  | ||   |||||||||||||||| | |  ||||    
T  32951433 ttatcatgttaatatgttaactttttataaaacatttcattgtgtccgtaatttaaaaatgaaaagtatac---cccctcccttcccctcttgagtcctt 32951337  T
Q  101 aatccaaacacaccctta 118  Q
     |||||||||||||||||    
T  32951336 catccaaacacaccctta 32951319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 52 - 119
Target Start/End: Original strand, 38510074 - 38510141
Alignment:
Q  52 tttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    |||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38510074 tttaaaaaagaaaactaaaccctcccctcccttcccctcctaaacccttaatccaaacacactcttag 38510141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 41498473 - 41498402
Alignment:
Q  47 cataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    ||||||||||||| |||||  ||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  41498473 cataatttaaaaacgaaaagtaaaccctcccctcacttcccctcctaaaccctcaatccaaacacaccctta 41498402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 28770852 - 28770965
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||| ||| || ||||||||||| | |||   |||||||||||| ||||| ||||||||| |||| || |||||||||||| |     
T  28770852 ttatcatgttaatatgttaattttttataaaacatttcataatgtg--taatttaaaaataaaaaataaaccctccactccttttccctcctaaaccttc 28770949  T
Q  101 aatccaaacacaccct 116  Q
     |||||||||||||||    
T  28770950 catccaaacacaccct 28770965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 12234082 - 12234008
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||| ||||||||||| |||||  || |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  12234082 gtccgtaatttaaaaaagaaaattaagccctaccctcccttcccctcctaaaccctcaatccaaacacaccctta 12234008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 35512947 - 35513037
Alignment:
Q  22 tttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacaca 112  Q
    |||||||||| ||||| | | |||||||||||||||||  ||||  || |||||||||||||||||||||||||||||  |||||||||||    
T  35512947 tttctaaaaatcattttataatgtccataatttaaaaaataaaagtaagccctcccctcccttcccctcctaaaccctccatccaaacaca 35513037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 43552107 - 43551996
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||||| |||||||||||||| |     | |||||||||||||||||| |||||||| | ||| ||| || |||||||| |     
T  43552107 ttatcatgttaatatgttaactttttaaaaaacatttcata----acgtaatttaaaaatgaaaaataaaccctcacatcctttcgccgcctaaaccttc 43552012  T
Q  101 aatccaaacacaccct 116  Q
     |||||||||||||||    
T  43552011 catccaaacacaccct 43551996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 51597797 - 51597894
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccc 98  Q
    ||||||| |||||||||||||||| |||||| ||||||| ||||| |||||||||||| ||||||  ||| | ||| || |||||| |||||||||||    
T  51597797 ttatcatcttaatatgttaactttttaaaaaccatttcatagtgttcataatttaaaattgaaaagtaaatcatcctcttccttcctctcctaaaccc 51597894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 30010404 - 30010332
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||| ||||||||| | |||||  ||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  30010404 gtccgtaatttaaacaagaaaagtaaatcctcccctcccttcccctcctaaaccctcaatccaaacacaccct 30010332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 20607349 - 20607463
Alignment:
Q  2 tatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaac-aaaccctcccctcccttcccctcctaaaccctt 100  Q
    ||||||||||||   |||| |||| ||||| ||||| | | ||||||||||| |||||  ||| |  ||||||||||||||||||||||||||||||||     
T  20607349 tatcatgttaat---ttaattttcaaaaaatcattttataatgtccataattaaaaaaaaaaatagtaaaccctcccctcccttcccctcctaaaccctc 20607445  T
Q  101 aatccaaacacaccctta 118  Q
     |||||||||||||||||    
T  20607446 catccaaacacaccctta 20607463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 117
Target Start/End: Complemental strand, 26324059 - 26324013
Alignment:
Q  71 ccctcccctcccttcccctcctaaacccttaatccaaacacaccctt 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  26324059 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccctt 26324013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 49946703 - 49946629
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctc 75  Q
    ||||||||||||||||||||||||  |||||| |||| | ||||||| |||||||||||||| ||| ||||||||    
T  49946703 ttatcatgttaatatgttaacttttaaaaaaatattttatagtgtccgtaatttaaaaatgacaaataaaccctc 49946629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 116
Target Start/End: Complemental strand, 2470819 - 2470730
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||||| | ||||| | ||||||||||||| |||  |||||||||  || ||||||||||||||||||  |||||||||||||||    
T  2470819 aaaaaacattttatagtgttcgtaatttaaaaatgtaaacgaaaccctccattctcttcccctcctaaaccctccatccaaacacaccct 2470730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 32951490 - 32951562
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||| ||||||||||| |||||  |||| |||||||||||||| ||||||||| || ||||||||||||||||    
T  32951490 gtccgtaatttaaaaacgaaaagtaaactctcccctcccttcctctcctaaactctcaatccaaacacaccct 32951562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 36285689 - 36285617
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccc 73  Q
    |||||||||||||||||||||||| ||||||| |||| | ||||| | |||||||||||||| ||| ||||||    
T  36285689 ttatcatgttaatatgttaactttttaaaaaatattttatagtgttcgtaatttaaaaatgataaataaaccc 36285617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 50744396 - 50744332
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaa-catttcacagtgtccataatttaaaaatgaaa 64  Q
    |||||||||||||||||||||| | ||||||| ||||||| ||||||| ||||||||||||||||    
T  50744396 ttatcatgttaatatgttaactctttaaaaaaacatttcatagtgtccgtaatttaaaaatgaaa 50744332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 51303429 - 51303381
Alignment:
Q  71 ccctcccctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||    
T  51303429 ccctcccctcccctcccctcctaaaccctcaatccaaacacacccttag 51303381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 10391944 - 10391870
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||| |||||||||||||||||  |||||||||||||  ||||||||||||| ||| ||||||||  ||||||||    
T  10391944 gtccgtaatttaaaaatgaaaagtaaaccctcccctcgtttcccctcctaaaacctcaatccaaattcaccctta 10391870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 49 - 123
Target Start/End: Original strand, 40095111 - 40095185
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttagagaa 123  Q
    ||||||||||| |||||  ||||||| || ||||||  ||| ||||||||| |||||||||||||||||||||||    
T  40095111 taatttaaaaacgaaaagtaaacccttccttcccttttccttctaaaccctcaatccaaacacacccttagagaa 40095185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 2859104 - 2859169
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaac 109  Q
    |||| |||||||||||  ||||  |||||||||||||||||||||||||||||| | |||||||||    
T  2859104 gtccgtaatttaaaaaataaaagtaaaccctcccctcccttcccctcctaaaccttcaatccaaac 2859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 45585800 - 45585739
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatga 62  Q
    ||||||||||||||||||||||||  ||||||||||| | ||| || |||||||||||||||    
T  45585800 ttatcatgttaatatgttaacttttaaaaaaacattttatagtatctataatttaaaaatga 45585739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 41676408 - 41676495
Alignment:
Q  1 ttatcatgttaatatgttaactt--tctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcc 86  Q
    |||||||||||||||||||| ||     ||||||||||| | ||||||| |||||||||||||||||  ||||||||||||| |||||    
T  41676408 ttatcatgttaatatgttaatttaaaaaaaaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctctcttcc 41676495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 35927859 - 35927812
Alignment:
Q  71 ccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||||||||    
T  35927859 ccctcccctccattcccctcctaaaacctcaatccaaacacaccctta 35927812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 72 - 121
Target Start/End: Complemental strand, 1085533 - 1085484
Alignment:
Q  72 cctcccctcccttcccctcctaaacccttaatccaaacacacccttagag 121  Q
    |||||||||| | |||||||||||||||  ||||||||||||||||||||    
T  1085533 cctcccctccatccccctcctaaaccctccatccaaacacacccttagag 1085484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 6563705 - 6563794
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctc 90  Q
    ||||||||||||||| |||||||  ||||||| | |||| |||||||   |||||||||||||||  |||||||| ||| | ||||||||    
T  6563705 ttatcatgttaatatattaacttcttaaaaaatagttcatagtgtcctcgatttaaaaatgaaaagtaaaccctctccttctttcccctc 6563794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 7444550 - 7444481
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacac 113  Q
    |||| ||||||||||| |||||  |||||||||| ||||||| ||||| ||||||| ||||| |||||||    
T  7444550 gtccgtaatttaaaaaagaaaagtaaaccctcccttcccttctcctcccaaaccctcaatcctaacacac 7444481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 128 - 253
Target Start/End: Original strand, 23547850 - 23547975
Alignment:
Q  128 ggtggctgaagcggtagtcgctgatgttttgggtttcaggtggggactccaagtggctgcggaacttaatcttaacaaggtcatctttgaactggatgcg 227  Q
    |||||||||| | || || ||||| || ||||||||||||||||| |||||||||||  ||||||  |  |||| | | || || ||||| ||| |||||    
T  23547850 ggtggctgaacctgttgttgctgaagtcttgggtttcaggtggggtctccaagtggcaacggaacgaagacttagccatgttatttttgagctgaatgcg 23547949  T
Q  228 caggtggtgattaattgtttcaaagg 253  Q
    ||||| ||| ||||||| ||||||||    
T  23547950 caggttgtggttaattgcttcaaagg 23547975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 26940953 - 26940841
Alignment:
Q  6 atgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatcc 105  Q
    ||||||||| |||||||||  || ||| |||||| |||||| ||||||||||||| ||||   ||||||||| || ||| | ||| |||||||| ||| |    
T  26940953 atgttaataagttaacttttaaacaaatatttcatagtgtctataatttaaaaataaaaagtgaaccctcccatctctt-cactcttaaaccctcaattc 26940855  T
Q  106 aaacacacccttag 119  Q
    |||||||| |||||    
T  26940854 aaacacactcttag 26940841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 20607263 - 20607223
Alignment:
Q  76 ccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  20607263 ccctcccttcccctcctaaaccctcaattcaaacacaccct 20607223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 40709441 - 40709532
Alignment:
Q  21 ctttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacac 113  Q
    |||| |||||||| ||| ||| ||| |||||||||||||  ||||   | ||||||||||| ||||||||||||| ||| |||||||||||||    
T  40709441 ctttttaaaaaaccttttacattgttcataatttaaaaaataaaagtga-ccctcccctccgttcccctcctaaatcctcaatccaaacacac 40709532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 525277 - 525344
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||||||||||| ||||   ||| || || ||||||||| ||||||||||| ||||||||||||||||    
T  525277 taatttaaaaattaaaagtgaactcttccttcccttcccgtcctaaaccctcaatccaaacacaccct 525344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 116
Target Start/End: Original strand, 1085695 - 1085734
Alignment:
Q  77 cctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  1085695 cctcccttcccctcctaaaccctctatccaaacacaccct 1085734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 116
Target Start/End: Original strand, 26941042 - 26941077
Alignment:
Q  81 ccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||||||||||||| ||||||||||||||||    
T  26941042 ccttcccctcctaaaccctcaatccaaacacaccct 26941077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 40709359 - 40709292
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||||| |||||  ||  ||||| ||||||||||||| |||||| | ||||||||||||||||    
T  40709359 taatttaaaaaagaaaagtaagtcctcctctcccttcccctcttaaaccttaaatccaaacacaccct 40709292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 47261440 - 47261519
Alignment:
Q  41 agtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttaga 120  Q
    ||||||| || |||||||| |||||  ||||||| ||||| |||||||| ||||| ||   |||||||||||||||||||    
T  47261440 agtgtccgtactttaaaaaagaaaattaaaccctaccctctcttccccttctaaatcccccatccaaacacacccttaga 47261519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 116
Target Start/End: Complemental strand, 17622570 - 17622536
Alignment:
Q  82 cttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||||| |||||||||||||||||||||||    
T  17622570 cttcccctcctgaacccttaatccaaacacaccct 17622536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 309
Target Start/End: Original strand, 23548015 - 23548069
Alignment:
Q  255 ctgtcatgagttgtatgccaatatggttgatgtttctgttttttacattagtcgt 309  Q
    |||||| || |||||||||||||||| ||||||||||||| |||  |||||||||    
T  23548015 ctgtcacgatttgtatgccaatatggctgatgtttctgttgtttttattagtcgt 23548069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 108
Target Start/End: Original strand, 25268414 - 25268500
Alignment:
Q  22 tttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaa 108  Q
    |||||||||| ||||| | | | ||| ||||||||||| | |||  ||||||||||||| |||||||| |||||||||  |||||||    
T  25268414 tttctaaaaatcattttataatttccgtaatttaaaaaaggaaagtaaaccctcccctcacttccccttctaaaccctccatccaaa 25268500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 23536843 - 23536924
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaa 108  Q
    ||||||||||| ||| ||  ||| |||||||||  |||||  | |||||||||||||||||||| |||| ||| ||||||||    
T  23536843 aaaaaacattttacattgatcattatttaaaaaataaaaatgagccctcccctcccttcccctcataaatcctcaatccaaa 23536924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 40964727 - 40964792
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaac-atttcacagtgtccataatttaaaaatgaaaa 65  Q
    |||||| |||||||||||||||||  ||||||  |||| || |||||| |||||||||||||||||    
T  40964727 ttatcacgttaatatgttaacttttaaaaaaaatatttgacggtgtccgtaatttaaaaatgaaaa 40964792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 47071251 - 47071292
Alignment:
Q  82 cttcccctcctaaacccttaatccaaacacacccttagagaa 123  Q
    |||||| |||||||||||| ||||||||||||||||| ||||    
T  47071251 cttcccttcctaaacccttcatccaaacacacccttaaagaa 47071292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 50744453 - 50744490
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcc 81  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  50744453 gtccgtaatttaaaaaagaaaaacaaaccctcccctcc 50744490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 51597733 - 51597672
Alignment:
Q  51 atttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacaca 112  Q
    ||||||||| |||||  |||| ||||||||||||||  || |||||||| ||||||||||||    
T  51597733 atttaaaaaagaaaagtaaactctcccctcccttcctttcataaaccctcaatccaaacaca 51597672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 6e-35; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 18231715 - 18231834
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||||   |||||||||||||||||  ||| ||||||||||||||||||||||||| ||     
T  18231715 ttatcatgttaatatgttaactttttaaaaaacatttcatagtgtttgtaatttaaaaatgaaaagtaaatcctcccctcccttcccctcctaaacgctc 18231814  T
Q  101 aatccaaacacacccttaga 120  Q
     |||||||||||||||||||    
T  18231815 catccaaacacacccttaga 18231834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 4833646 - 4833529
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||| ||||||||| || ||||||||||| ||||||  |||||||||||||||||  ||||||||||||||||||||||||||||||||     
T  4833646 ttatcatgttaataggttaactttttataaaacatttcatagtgtctgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccctc 4833547  T
Q  101 aatccaaacacaccctta 118  Q
     ||||||||| |||||||    
T  4833546 catccaaacataccctta 4833529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 47390985 - 47391102
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    ||||||||||||||||||||| || |||||||  ||| | ||||||| ||||||||||||||||| ||||| |||||||||||||||||| ||||||||     
T  47390985 ttatcatgttaatatgttaacattttaaaaaatgttttatagtgtccgtaatttaaaaatgaaaaccaaactctcccctcccttcccctcttaaaccctc 47391084  T
Q  101 aatccaaacacaccctta 118  Q
     |||||||||||||||||    
T  47391085 catccaaacacaccctta 47391102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 42306466 - 42306571
Alignment:
Q  8 gttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaa 107  Q
    ||||||||| ||||||| |||||||||||||| ||||||| |||||||||||||||||  ||||| |||||||  ||||||||||||||||| |||||||    
T  42306466 gttaatatgctaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaattaaaccatcccctcaattcccctcctaaaccctcaatccaa 42306565  T
Q  108 acacac 113  Q
    ||||||    
T  42306566 acacac 42306571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 41497072 - 41496957
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||| ||| |||||||||||||  | ||||| |||||||||||| ||||  ||| | ||||||||||||||||||||||||||     
T  41497072 ttatcatgttaatatgttaaatttttaaaaaacatttcctattgtccgtaatttaaaaataaaaagtaaatcatcccctcccttcccctcctaaaccctc 41496973  T
Q  101 aatccaaacacaccct 116  Q
     |||||||||||||||    
T  41496972 catccaaacacaccct 41496957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 40196647 - 40196532
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||| ||| ||||||||||||| || ||||||||| | ||||||| ||||| |||||||||||  ||||||||| |||||||||||||| |||||||     
T  40196647 ttatcaggttgatatgttaactttttataaaacattttatagtgtccgtaattcaaaaatgaaaagtaaaccctcctctcccttcccctcccaaaccctc 40196548  T
Q  101 aatccaaacacaccct 116  Q
     |||||||||||||||    
T  40196547 catccaaacacaccct 40196532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 10315762 - 10315879
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    ||||| |||||||||||||| ||| |||||||||||||| ||||||| || ||||||||||||||| ||| |  || |||||||||||||||||||| |     
T  10315762 ttatcttgttaatatgttaaatttttaaaaaacatttcatagtgtccgtattttaaaaatgaaaaataaatcaccctctcccttcccctcctaaaccttc 10315861  T
Q  101 aatccaaacacaccctta 118  Q
     |||||||||| ||||||    
T  10315862 catccaaacacgccctta 10315879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 33655223 - 33655148
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcc 76  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||  |||||||||    
T  33655223 ttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctcc 33655148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 37925930 - 37925836
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttagag 121  Q
    ||||||||||| ||| ||| | |||||||||||  ||||   ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  37925930 aaaaaacattttacattgttcgtaatttaaaaaataaaagtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacacccttagag 37925836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 39856037 - 39856111
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||| ||||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39856037 gtccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccctta 39856111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 13425235 - 13425118
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||| |||||  |||||| ||||   ||||||  |||||||||||| ||||| ||||| ||| || |||||||||||||||||||     
T  13425235 ttatcatgttaatatgttgacttttgaaaaaatattttgtagtgtctgtaatttaaaaataaaaaataaaccatcctcttccttcccctcctaaaccctc 13425136  T
Q  101 aatccaaacacaccctta 118  Q
     |||||||||||||||||    
T  13425135 tatccaaacacaccctta 13425118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 13771061 - 13770948
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||||| || || |  ||| | ||||||| |||||||||||| | ||  ||| |||||||||||||||||||||||| |||     
T  13771061 ttatcatgttaatatgttaactttttataata--ttttatagtgtccgtaatttaaaaataataagtaaatcctcccctcccttcccctcctaaatcctc 13770964  T
Q  101 aatccaaacacaccct 116  Q
    ||||||||||||||||    
T  13770963 aatccaaacacaccct 13770948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 1051675 - 1051746
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttaga 120  Q
    ||||||||||| |||||| ||| |||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  1051675 taatttaaaaaagaaaaataaatcctctcctcccttcccctcctaaaccctcaatccaaacacacccttaga 1051746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 40282263 - 40282190
Alignment:
Q  50 aatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttagagaa 123  Q
    |||||||||| ||||| |||||||||| |||||||||||||||||||||| |||||||||| ||||| ||||||    
T  40282263 aatttaaaaaagaaaatcaaaccctcctctcccttcccctcctaaaccctcaatccaaacataccctaagagaa 40282190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 1051613 - 1051515
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    ||||||||| |||||||||||||| ||||||||||||||  |||||| ||||||||||||||||    ||||||||||||  ||||||||||||||||||    
T  1051613 ttatcatgt-aatatgttaactttttaaaaaacatttca-tgtgtccgtaatttaaaaatgaaatgttaaccctcccctctattcccctcctaaaccctt 1051516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 25887321 - 25887439
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaa-catttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccct 99  Q
    ||||||| ||||||||||||||||  |||||| |||||||   | | | ||||||||||||||||   |||| |||||||||||||||||||||||||||    
T  25887321 ttatcatattaatatgttaacttttaaaaaaaacatttcatgattttcgtaatttaaaaatgaaatgtaaactctcccctcccttcccctcctaaaccct 25887420  T
Q  100 taatccaaacacacccttag 119  Q
    | | ||||||||||||||||    
T  25887421 tca-ccaaacacacccttag 25887439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 24970280 - 24970187
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaa 95  Q
    |||||| ||||||||||||||||| ||||||| |||||| ||| ||| |||||||||||||||||  ||| | |||||| |||||||||||||||    
T  24970280 ttatcaagttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaatcatcccct-ccttcccctcctaaa 24970187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 36267647 - 36267553
Alignment:
Q  22 tttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||||||||| ||||| | | | ||| ||||||||||| |||||  || |||||||||||||||||||||||||||||  |||||||||||||||    
T  36267647 tttctaaaaatcattttataatatccgtaatttaaaaaagaaaactaagccctcccctcccttcccctcctaaaccctccatccaaacacaccct 36267553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 25887257 - 25887192
Alignment:
Q  51 atttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||| ||| |||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||    
T  25887257 atttataaaagaaaaacaaatcctcccctcccttcccctcataaaccctcaatccaaacacaccct 25887192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 43230365 - 43230481
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    ||||||||||||||||||||||||  |||||| | |||| ||||||| |||||||||||| ||||  |||| ||||||| | |||| ||| ||||||||     
T  43230365 ttatcatgttaatatgttaacttttaaaaaaaaaattca-agtgtccgtaatttaaaaataaaaagtaaactctccccttctttcctctcataaacccta 43230463  T
Q  101 aatccaaacacaccctta 118  Q
     |||||||||||| ||||    
T  43230464 catccaaacacacactta 43230481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 47390924 - 47390855
Alignment:
Q  47 cataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||||||| |||||  ||||||||| ||||||||||||||||| |||| ||||||||||||||||    
T  47390924 cataatttaaaaaagaaaagtaaaccctccactcccttcccctcctaacccctcaatccaaacacaccct 47390855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 34235122 - 34235058
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaa 65  Q
    ||||||| |||||||||||||||| || ||||||||||| ||||||| |||||||||||||||||    
T  34235122 ttatcatattaatatgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaa 34235058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 31571642 - 31571713
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccc 115  Q
    |||| ||||||||||| |||||  |||| |||||||| |||||||||||||||||| |||||||||||||||    
T  31571642 gtccgtaatttaaaaaagaaaagtaaactctcccctcgcttcccctcctaaaccctcaatccaaacacaccc 31571713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 46 - 113
Target Start/End: Original strand, 33655282 - 33655349
Alignment:
Q  46 ccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacac 113  Q
    |||||||||||||| |||||  |||||||| |||| |||||||||||||||||| |||||||||||||    
T  33655282 ccataatttaaaaaagaaaagtaaaccctcgcctctcttcccctcctaaaccctcaatccaaacacac 33655349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 36267730 - 36267797
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||||||||||  |||||  | ||||||||||||||||||||||||||||| ||||||||||||||||    
T  36267730 taatttaaaaaataaaaatgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 36267797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 13771118 - 13771192
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||| ||||||||||| |||||  |||| ||| ||||||||||||||||||||||| |||| |||||||||||||    
T  13771118 gtccgtaatttaaaaacgaaaagtaaactctcacctcccttcccctcctaaaccctcaatctaaacacaccctta 13771192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 22163224 - 22163167
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaa 59  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||    
T  22163224 ttatcatgttaatatgtta-ctttctaaaaaacatttcatagtgtccgtaatttaaaaa 22163167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 22221932 - 22221875
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaa 59  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||    
T  22221932 ttatcatgttaatatgtta-ctttctaaaaaacatttcatagtgtccgtaatttaaaaa 22221875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 33519198 - 33519292
Alignment:
Q  22 tttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||||||||| ||||| | | ||||  ||||||||| | |||||  || |||||||||||||||||||||||||||||  |||||||||||||||    
T  33519198 tttctaaaaatcattttataatgtctgtaatttaaagaagaaaagtaatccctcccctcccttcccctcctaaaccctccatccaaacacaccct 33519292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 28074197 - 28074100
Alignment:
Q  22 tttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    |||||||||| ||||| | | ||||| ||||||||||| |||||   |   ||||||||||||||||||||||||| | |||||||||||||||||||    
T  28074197 tttctaaaaatcattttataatgtccgtaatttaaaaaagaaaagtgagttctcccctcccttcccctcctaaaccttcaatccaaacacacccttag 28074100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 37620903 - 37621012
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||| |||  | || |||| ||||| ||||| | | ||||||||||||||||| ||||| ||||||||||||||||||||| ||  |||||||     
T  37620903 ttatcatgttgataattcaattttccaaaaatcattttataatgtccataatttaaaaaagaaaagcaaaccctcccctcccttcccttctcaaaccctc 37621002  T
Q  101 aatccaaaca 110  Q
     |||||||||    
T  37621003 catccaaaca 37621012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 45940771 - 45940658
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||| ||||||||||  || |||| |||||||||||||| ||||||| |||| ||||||| ||||  ||||  | |||||||||||||| ||||||| |     
T  45940771 ttattatgttaatatactatctttgtaaaaaacatttcatagtgtccgtaatataaaaataaaaagtaaactttgccctcccttccccttctaaaccttc 45940672  T
Q  101 aatccaaacacacc 114  Q
     |||||||||||||    
T  45940671 catccaaacacacc 45940658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 48881631 - 48881558
Alignment:
Q  43 tgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||| ||||||||||| |||||  || || ||||||||||||||||||||||||||  |||||||||||||||    
T  48881631 tgtccgtaatttaaaaaagaaaagtaagccatcccctcccttcccctcctaaaccctccatccaaacacaccct 48881558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 37620863 - 37620776
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacc 114  Q
    ||||| ||||| ||| ||| |||||||| ||||| ||||   ||| ||||||||||||||||||| ||||||| ||||||||||||||    
T  37620863 aaaaatcattttacattgttcataatttgaaaataaaaagtgaactctcccctcccttcccctcccaaaccctcaatccaaacacacc 37620776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 41008254 - 41008188
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaaca 110  Q
    |||| ||||||||||| ||||||||||  ||||||||||||||||||  ||||||| ||||||||||    
T  41008254 gtccgtaatttaaaaaagaaaaacaaattctcccctcccttcccctctcaaaccctcaatccaaaca 41008188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 24970338 - 24970407
Alignment:
Q  45 tccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacc 114  Q
    ||||||||||||||| ||||||||||| || ||||||    |||||||||||||| ||||||||||||||    
T  24970338 tccataatttaaaaaagaaaaacaaactcttccctcctaaaccctcctaaaccctcaatccaaacacacc 24970407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 121
Target Start/End: Original strand, 34228496 - 34228568
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttagag 121  Q
    |||||| ||||||||||  ||| |||||||||||||| ||||||||||| | ||| |||||||||||| ||||    
T  34228496 taattttaaaatgaaaagtaaatcctcccctcccttctcctcctaaaccttcaattcaaacacaccctaagag 34228568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 48013591 - 48013520
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccct 99  Q
    ||||||||||| ||| ||| | |||||||||||| |||| | ||| |||||||||||||||||||||||||||    
T  48013591 aaaaaacattttacattgttcgtaatttaaaaat-aaaagcgaacgctcccctcccttcccctcctaaaccct 48013520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 28074307 - 28074352
Alignment:
Q  71 ccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||| |||||| |||||||||||| ||||||||||||||||    
T  28074307 ccctccccttccttcctctcctaaaccctcaatccaaacacaccct 28074352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 33519142 - 33519045
Alignment:
Q  22 tttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    |||| ||||||||||| | | ||| | |||||||||||  ||||   | ||||||||||||||||||||||||| |||  |||||||||| |||||||    
T  33519142 tttcaaaaaaacattttatattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaacctccatccaaacactcccttag 33519045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 48881758 - 48881795
Alignment:
Q  81 ccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  48881758 ccttcccctcctaaaccctcaatccaaacacaccctta 48881795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 18795750 - 18795845
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttagagaa 123  Q
    ||||||||||| | | ||| | ||||||||||| ||||| ||| || |||||||| ||||||| |||||| || ||||||||||||| || ||||||    
T  18795750 aaaaaacattttatattgttcgtaatttaaaaaagaaaatcaagccttcccctcc-ttccccttctaaactctcaatccaaacacactctaagagaa 18795845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 118
Target Start/End: Complemental strand, 30592343 - 30592251
Alignment:
Q  26 taaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||||| ||||| | ||||||  ||||||||||| |||||  || ||||||| |||||| |||||||||| |||  ||||||| |||||||||    
T  30592343 taaaaatcattttatagtgtctgtaatttaaaaaagaaaagtaagccctcccttccctttccctcctaaatcctccatccaaatacaccctta 30592251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Original strand, 31364249 - 31364285
Alignment:
Q  77 cctcccttcccctcctaaacccttaatccaaacacac 113  Q
    ||||||||||||||||||||||| |||||||||||||    
T  31364249 cctcccttcccctcctaaaccctcaatccaaacacac 31364285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 37417835 - 37417871
Alignment:
Q  84 tcccctcctaaacccttaatccaaacacacccttaga 120  Q
    |||||||||||||||| ||||||||||||||||||||    
T  37417835 tcccctcctaaaccctcaatccaaacacacccttaga 37417871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 39646513 - 39646469
Alignment:
Q  72 cctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||||||||| |||||||||| | ||||||||||||||||    
T  39646513 cctcccctcccttcctctcctaaaccgtcaatccaaacacaccct 39646469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 40572349 - 40572287
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaa 64  Q
    |||||||||||||||||||||||| ||||||| |||| | ||  ||| ||||||||||||||||    
T  40572349 ttatcatgttaatatgttaacttt-taaaaaatattttatagcatccgtaatttaaaaatgaaa 40572287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 4835546 - 4835477
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    ||||||||||| |||||  || | | |||||||||| | |||||||||||| |||| |||||||||||||    
T  4835546 taatttaaaaaagaaaagtaagcacacccctccctttctctcctaaaccctcaatctaaacacaccctta 4835477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 26365900 - 26366009
Alignment:
Q  4 tcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaat 103  Q
    |||||||| ||| |||| |||  |||||| ||||   ||| ||||||||||||||| ||||| |||||  ||||||| |||||| || ||||||||   |    
T  26365900 tcatgttattattttaattttaaaaaaaatattttgtagtatccataatttaaaaacgaaaatcaaactatcccctctcttcccatcttaaaccctccgt 26365999  T
Q  104 ccaaacacac 113  Q
    ||||||||||    
T  26366000 ccaaacacac 26366009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 37417748 - 37417699
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccata 50  Q
    ||||||||| |||||||||||||| || ||||||||||| |||| |||||    
T  37417748 ttatcatgtgaatatgttaactttttagaaaacatttcatagtgaccata 37417699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 125
Target Start/End: Original strand, 40196733 - 40196774
Alignment:
Q  84 tcccctcctaaacccttaatccaaacacacccttagagaact 125  Q
    |||||||| ||||||| |||||||| ||||||||||||||||    
T  40196733 tcccctcccaaaccctcaatccaaatacacccttagagaact 40196774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 43230303 - 43230239
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacac 113  Q
    ||||||||||| |||||  |||||||||||| |||| | ||| |||||||  |||||||||||||    
T  43230303 taatttaaaaaagaaaagtaaaccctccccttcctttctctcttaaacccccaatccaaacacac 43230239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 48152142 - 48152226
Alignment:
Q  34 atttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||||| ||| | |||||||||||||||||||| ||  | ||| |||  ||||| | ||||||| || |||||||||||||||||    
T  48152142 atttcatagtatgcataatttaaaaatgaaaaataagtcttcctctcatttccctttctaaacctttcatccaaacacaccctta 48152226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 9e-34; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 24560346 - 24560467
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||  |||||||||||||||||  |||| ||||| ||| |||||||||||||||||     
T  24560346 ttatcatgttaatatgttaactttttaaaaaacatttcatagtgtcggtaatttaaaaatgaaaagtaaactctcccatccgttcccctcctaaaccctc 24560445  T
Q  101 aatccaaacacacccttagaga 122  Q
     ||||||||||||||| |||||    
T  24560446 catccaaacacaccctaagaga 24560467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 24560289 - 24560213
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttaga 120  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24560289 gtccgtaatttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttaga 24560213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 41110436 - 41110323
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||||| || |||| |||||| ||||||| |||||||||||||||||  ||||| || ||||||||||||||||||| |||     
T  41110436 ttatcatgttaatatgttaactttttataaaatatttcatagtgtccgtaatttaaaaatgaaaagtaaaccttctcctcccttcccctcctaaatcctc 41110337  T
Q  101 aatccaaacacacc 114  Q
     |||||||||||||    
T  41110336 catccaaacacacc 41110323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 36569018 - 36568904
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||||| | |||||||||||| ||||| |  |||||||||||| |||| |||| ||||||||| |||| ||||||||||||     
T  36569018 ttatcatgttaatatgttaactttttgaaaaacatttcatagtgttcgaaatttaaaaatg-aaaataaactctcccctccattccactcctaaaccctc 36568920  T
Q  101 aatccaaacacaccct 116  Q
     |||||||||||||||    
T  36568919 catccaaacacaccct 36568904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 28581291 - 28581183
Alignment:
Q  11 aatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaaca 110  Q
    |||||||||||||| ||||||| |||||||| | ||  |||||||||||||||||  ||||||||||||||||||| || |||||||||  |||||||||    
T  28581291 aatatgttaactttttaaaaaatatttcacaatatctgtaatttaaaaatgaaaactaaaccctcccctcccttcctcttctaaaccctccatccaaaca 28581192  T
Q  111 cacccttag 119  Q
    ||| |||||    
T  28581191 cactcttag 28581183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 37102264 - 37102184
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcc 81  Q
    |||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||  ||||||||||||||    
T  37102264 ttattatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactaaaccctcccctcc 37102184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 52474044 - 52474157
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    ||||||| |||||||||||||||| || |||| |||||| ||  ||| |||||||||||| ||||  ||||||||| ||||||||||||||||||||| |    
T  52474044 ttatcatattaatatgttaactttttacaaaatatttcataggatccgtaatttaaaaataaaaagtaaaccctcctctcccttcccctcctaaacccat 52474143  T
Q  101 aatccaaacacacc 114  Q
      ||||||||||||    
T  52474144 cctccaaacacacc 52474157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 9312586 - 9312471
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||||| || |||| |||||| ||||||  ||||||||||||||||| |||||||     |||||||||||  ||||||||     
T  9312586 ttatcatgttaatatgttaactttttacaaaatatttcatagtgtctgtaatttaaaaatgaaaatcaaaccc-----tcccttcccctattaaaccctc 9312492  T
Q  101 aatccaaacacacccttagag 121  Q
    |||||||||| ||||| ||||    
T  9312491 aatccaaacataccctaagag 9312471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 30200203 - 30200123
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcc 81  Q
    |||| |||||||||||| |||||| |||||||||||||| ||||||| |||||||||||||||||  ||||||||||||||    
T  30200203 ttattatgttaatatgtaaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactaaaccctcccctcc 30200123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 18654715 - 18654600
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||| |  |||||| |||| | || |||| ||||||||||||||||   |||||||||| || ||| ||||||||||||||     
T  18654715 ttatcatgttaatatgttaactcttcaaaaaatattttatagggtccgtaatttaaaaatgaaatctaaaccctcccatctctttccctcctaaaccctc 18654616  T
Q  101 aatccaaacacaccct 116  Q
     |||||||||||||||    
T  18654615 catccaaacacaccct 18654600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 41040065 - 41039950
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||||| || |||| |||||| ||||||  |||||||||| ||||||  ||| ||| | ||| |||||||||||||||| |     
T  41040065 ttatcatgttaatatgttaactttttataaaatatttcatagtgtctgtaatttaaaattgaaaattaaagcctacgctctcttcccctcctaaaccttc 41039966  T
Q  101 aatccaaacacaccct 116  Q
     |||||||||||||||    
T  41039965 catccaaacacaccct 41039950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 25655085 - 25654991
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaa 95  Q
    ||||||| |||||||||||||| |  ||||||||||||  ||||| | |||| ||||||||||||  ||||||||||||||||||||||||||||    
T  25655085 ttatcatattaatatgttaactcttcaaaaaacatttcttagtgttcgtaatataaaaatgaaaagtaaaccctcccctcccttcccctcctaaa 25654991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 43 - 119
Target Start/End: Original strand, 34641161 - 34641237
Alignment:
Q  43 tgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    ||||| ||||||||||| |||||  || |||||||||||||||||||||||||||||  ||||||||||||||||||    
T  34641161 tgtccgtaatttaaaaaagaaaagtaagccctcccctcccttcccctcctaaaccctccatccaaacacacccttag 34641237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 27542046 - 27541937
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||  ||| ||| ||  |||||| ||||||  ||||||||||||||||    |||| || |||||||||||||||||||||||     
T  27542046 ttatcatgttaatatgttagatttttaacaagtatttcatagtgtctctaatttaaaaatgaaatgtgaaccatctcctcccttcccctcctaaaccctc 27541947  T
Q  101 aatccaaaca 110  Q
    ||||||||||    
T  27541946 aatccaaaca 27541937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 220512 - 220448
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaa 65  Q
    |||| ||||||||||||||||||| |||||||||||||| | ||||| |||||||||||||||||    
T  220512 ttattatgttaatatgttaactttttaaaaaacatttcataatgtccgtaatttaaaaatgaaaa 220448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 21773911 - 21773991
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcc 81  Q
    ||||||||| |||||||||||||| |||||||||||||  ||||| | |||||||||||| ||||  ||||||||||||||    
T  21773911 ttatcatgtaaatatgttaactttttaaaaaacatttcctagtgttcgtaatttaaaaataaaaagtaaaccctcccctcc 21773991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 28582681 - 28582753
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||| ||||||||||| |||||  |||||||||||||||||||||||||||| ||| | ||||||||||||||    
T  28582681 gtccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaatcctcagtccaaacacaccct 28582753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 37807209 - 37807273
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaa 65  Q
    ||||||||||||||| |||||||| |||||||||||||| |||||||| |||||||||| |||||    
T  37807209 ttatcatgttaatatattaactttttaaaaaacatttcatagtgtccaaaatttaaaaacgaaaa 37807273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 10748405 - 10748299
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||||| |||||||||||| | | || || |||||||||||||      |||| |||  ||||||||||||||||||||||     
T  10748405 ttatcatgttaatatgttaactttttaaaaaacattttataatgcccgtaatttaaaaatg-----taaactctcttctcccttcccctcctaaaccctc 10748311  T
Q  101 aatccaaacaca 112  Q
     |||||||||||    
T  10748310 catccaaacaca 10748299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 25655144 - 25655218
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||| ||||||||||||||||   |||||||||||||||||| |||| | |||||| ||||||||||||||||||    
T  25655144 gtccgtaatttaaaaatgaaagttaaaccctcccctcccttctcctcttcaaccctcaatccaaacacaccctta 25655218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 52185145 - 52185223
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctccc 82  Q
    |||||||||||||||||||||||| || |||| ||||   |||||||||||||||||||| ||||| |||||||||||||||    
T  52185145 ttatcatgttaatatgttaactttttataaaatattt--tagtgtccataatttaaaaat-aaaaataaaccctcccctccc 52185223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 16275820 - 16275707
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||| ||||||||| || ||||||||||| | |||||  |||||||||||||| |   ||| |||||||||||| ||||  |||||| |     
T  16275820 ttatcatgttaataagttaactttttataaaacatttcataatgtccgaaatttaaaaatgaatagtgaactctcccctccctttcccttataaaccatc 16275721  T
Q  101 aatccaaacacacc 114  Q
     |||||||||||||    
T  16275720 catccaaacacacc 16275707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 24253869 - 24253966
Alignment:
Q  19 aactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||||||  ||||| | | ||||| ||||||||||| |||||  ||| ||| |||||||||||||| |||||||||  |||||||||||||||    
T  24253869 aactttctaaaactcattttataatgtccgtaatttaaaaaagaaaagtaaatccttccctcccttccccttctaaaccctccatccaaacacaccct 24253966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 46556277 - 46556368
Alignment:
Q  4 tcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaac 96  Q
    |||||||||||| |||||||| ||||||| || ||| ||||||| ||||| |||||||||||  ||| |||||||||| |||| |||||||||    
T  46556277 tcatgttaatatcttaactttttaaaaaatatgtcatagtgtccgtaattgaaaaatgaaaagtaaa-cctcccctccattcctctcctaaac 46556368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 18654792 - 18654847
Alignment:
Q  63 aaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    ||||||||| ||||||||||||||||||||||||||| ||| ||||||||| ||||    
T  18654792 aaaacaaactctcccctcccttcccctcctaaaccctcaattcaaacacactctta 18654847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 44412428 - 44412357
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttaga 120  Q
    |||||||||||| |||||  |  ||||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  44412428 taatttaaaaataaaaaatgagtcctcccctctcttcccctcctaaaccctcaattcaaacacacccttaga 44412357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 24253791 - 24253717
Alignment:
Q  47 cataatttaaaaatgaaaaacaaaccctcccc-tcccttcccctcctaaacccttaatccaaacacacccttaga 120  Q
    |||||||||||||| ||||   ||| |||||| |||||| |||||||||||||| ||||||||||||||||||||    
T  24253791 cataatttaaaaattaaaagtgaacactccccctccctttccctcctaaaccctcaatccaaacacacccttaga 24253717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 27542106 - 27542172
Alignment:
Q  47 cataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacac 113  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||| ||||||||  |||||| |||||    
T  27542106 cataatttaaaaaagaaaaacaaactctcccctccctgcccctcgtaaaccctcgatccaatcacac 27542172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 41110493 - 41110567
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||| ||||||||||| |||||  ||||| ||| |||||||||||||  ||||||| ||||||||||||||||||    
T  41110493 gtccgtaatttaaaaacgaaaagtaaaccttcctctcccttcccctcacaaaccctcaatccaaacacaccctta 41110567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 55327499 - 55327612
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||| ||||||||| | ||||||| |||||||||||||| | ||||| | ||||||||| ||||| ||||| ||| ||||  || ||||  |||||||||    
T  55327499 ttattatgttaatacgctaactttttaaaaaacatttcataatgtccgtgatttaaaaacgaaaaccaaactctctcctctttttcccttataaaccctt 55327598  T
Q  101 aatccaaacacacc 114  Q
     || ||||||||||    
T  55327599 catgcaaacacacc 55327612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 55428550 - 55428619
Alignment:
Q  43 tgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacaca 112  Q
    ||||| ||||||||| | |||||  ||| | |||||||||||||||||||||||||| ||||||||||||    
T  55428550 tgtccgtaatttaaagaagaaaagtaaatcatcccctcccttcccctcctaaaccctcaatccaaacaca 55428619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 26135968 - 26136024
Alignment:
Q  43 tgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccct 99  Q
    ||||| ||||||||||| |||||  ||||||||| ||||||||||||||||||||||    
T  26135968 tgtccgtaatttaaaaaagaaaagtaaaccctccactcccttcccctcctaaaccct 26136024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 30200263 - 30200344
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt----aatccaaacacacccttagag 121  Q
    |||| ||||||||||| |||||  ||||||| |||||||||||||||||| |||||     |||||||||||||||||||||    
T  30200263 gtccgtaatttaaaaaagaaaagtaaacccttccctcccttcccctcctataccctccctcaatccaaacacacccttagag 30200344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 5903597 - 5903546
Alignment:
Q  68 aaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    |||||||||||| |||||||||| |||| ||| |||||||||||||||||||    
T  5903597 aaaccctcccctgccttcccctcttaaatcctcaatccaaacacacccttag 5903546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 41414167 - 41414076
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    ||||||||||| ||  ||| |||||||||||||  ||||   | |||||||||||||| |||||||||||||| |||| ||||| |||||||    
T  41414167 aaaaaacattttaccttgttcataatttaaaaaataaaagtgagccctcccctccctttccctcctaaaccctcaatctaaacataccctta 41414076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 6803378 - 6803447
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    ||||||||||| |||||  |||| ||| |||| |||||||||||||||| | ||||||||||||| ||||    
T  6803378 taatttaaaaaagaaaattaaactctctcctctcttcccctcctaaaccttcaatccaaacacacactta 6803447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 9312651 - 9312715
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    ||||||||||| ||||| ||||||||||||||||     |||||||||||| ||||||||||| ||||||    
T  9312651 taatttaaaaaagaaaatcaaaccctcccctccc-----ctcctaaaccctcaatccaaacactccctta 9312715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 17474383 - 17474452
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||||||||||  ||||   ||| |||||||||||||||||||| |||||| |||||||||||| |||||    
T  17474383 taatttaaaaaataaaagttaactctcccctcccttcccctcctcaaccctcaatccaaacacatcctta 17474452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 121
Target Start/End: Complemental strand, 21773854 - 21773777
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttagag 121  Q
    |||| ||||||| ||| |||||  | ||||| || ||||||||||||||||||| | |||||||||| ||||||||||    
T  21773854 gtccgtaatttagaaaagaaaagtatacccttccttcccttcccctcctaaaccttcaatccaaacatacccttagag 21773777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 72 - 121
Target Start/End: Complemental strand, 42772088 - 42772039
Alignment:
Q  72 cctcccctcccttcccctcctaaacccttaatccaaacacacccttagag 121  Q
    ||||||||||||||||||| |||||| | |||||||||||||| ||||||    
T  42772088 cctcccctcccttcccctcttaaaccttcaatccaaacacacctttagag 42772039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 46205071 - 46205144
Alignment:
Q  51 atttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttagagaac 124  Q
    |||||||||| ||||  ||| | | |||||| |||||||||||||||||| ||||||||| |||||||| ||||    
T  46205071 atttaaaaattaaaagtaaatctttccctccattcccctcctaaacccttcatccaaacaaacccttagcgaac 46205144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 220569 - 220641
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||| ||||||||||| |||||  |||  ||||||||||||| |||||||||||||  ||||||||| |||||    
T  220569 gtccgtaatttaaaaaagaaaagtaaattctcccctcccttctcctcctaaaccctccatccaaacagaccct 220641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 119
Target Start/End: Complemental strand, 651776 - 651737
Alignment:
Q  80 cccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  651776 ccctccccctcctaaaccctcaatccaaacacacccttag 651737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 10943769 - 10943852
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaaca 110  Q
    |||||||||||  || ||| | |||||||||||| ||||   |||||||||||| ||| ||||| |||||||| ||||||||||    
T  10943769 aaaaaacattttgcattgttcgtaatttaaaaattaaaagtgaaccctcccctctctttccctcataaaccctcaatccaaaca 10943852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 13082943 - 13082856
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacc 114  Q
    ||||||||||||| ||||||| || ||||||||| ||||  ||||| ||| ||| ||| | || |||||||||  |||||||||||||    
T  13082943 aaaaaacatttcatagtgtccgtattttaaaaataaaaattaaaccttcctctctctttctcttctaaaccctccatccaaacacacc 13082856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 116
Target Start/End: Original strand, 37102348 - 37102383
Alignment:
Q  81 ccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||||||||||||| ||||||||||||||||    
T  37102348 ccttcccctcctaaaccctcaatccaaacacaccct 37102383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 651886 - 651944
Alignment:
Q  28 aaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcc 86  Q
    |||||||||||| ||| |||||||||||||||  | ||  |||||||||||||||||||    
T  651886 aaaaacatttcatagtttccataatttaaaaacaataagtaaaccctcccctcccttcc 651944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 2387875 - 2387817
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaa 59  Q
    ||||||||||| ||| |||||||  ||||||||||| || ||||||| |||||||||||    
T  2387875 ttatcatgttattattttaacttattaaaaaacattccatagtgtccgtaatttaaaaa 2387817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 23028088 - 23028173
Alignment:
Q  34 atttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    |||||| ||||||| |||||||||||| ||||  ||  ||| |||||  ||||||||| |||||||  ||||||||||||| ||||    
T  23028088 atttcatagtgtccgtaatttaaaaataaaaagtaagtcctgccctcttttcccctcccaaaccctccatccaaacacacctttag 23028173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 54574563 - 54574600
Alignment:
Q  79 tcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||| ||||||||||| ||||||||||||||||    
T  54574563 tcccttcccttcctaaaccctcaatccaaacacaccct 54574600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 116
Target Start/End: Original strand, 21773984 - 21774016
Alignment:
Q  84 tcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||||||||||| |||||||||||||||    
T  21773984 tcccctcctaaacccttcatccaaacacaccct 21774016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 31664427 - 31664391
Alignment:
Q  76 ccctcccttcccctcctaaacccttaatccaaacaca 112  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  31664427 ccctcccttcccctcttaaaccctcaatccaaacaca 31664391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 31931969 - 31932005
Alignment:
Q  76 ccctcccttcccctcctaaacccttaatccaaacaca 112  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  31931969 ccctcccttcccctcttaaaccctcaatccaaacaca 31932005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 116
Target Start/End: Complemental strand, 34641034 - 34641002
Alignment:
Q  84 tcccctcctaaacccttaatccaaacacaccct 116  Q
    |||||||||||||||| ||||||||||||||||    
T  34641034 tcccctcctaaaccctcaatccaaacacaccct 34641002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 73; Significance: 4e-33; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 39302 - 39186
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccct-cccctcccttcccctcctaaaccct 99  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||  ||||||| ||||||  |||||||||||||||||    
T  39302 ttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctccccctcatttcccctcctaaaccct 39203  T
Q  100 taatccaaacacaccct 116  Q
      |||||||||||||||    
T  39202 ccatccaaacacaccct 39186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 39362 - 39436
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||| ||||||||||| |||||  ||||||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  39362 gtccgtaatttaaaaaagaaaagtaaaccctcccctccctttcccttctaaaccctcaatccaaacacaccctta 39436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 16411 - 16293
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    ||||||||||||||||||||| || || ||||||||||| ||||| |||||||||||||||||||  |||||||||||||| || ||||||||||||||     
T  16411 ttatcatgttaatatgttaacgttttataaaacatttcatagtgttcataatttaaaaatgaaaagtaaaccctcccctccttttccctcctaaaccctc 16312  T
Q  101 aatccaaacacacccttag 119  Q
     ||||||||| ||||||||    
T  16311 catccaaacaaacccttag 16293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 31543187 - 31543070
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||| ||||||||||||||||||| | |||||||||||| ||| ||| |||||||||||||||||  ||||||||||||||||||||||| ||||||||     
T  31543187 ttatgatgttaatatgttaacttttttaaaaacatttcatagtttccgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcttaaaccctc 31543088  T
Q  101 aatccaaacacaccctta 118  Q
     ||||||||| |||||||    
T  31543087 catccaaacataccctta 31543070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 11785655 - 11785770
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||| ||||||| ||||||| |||||| | ||||| ||||||||||||||||| ||||||||||| || ||| ||||||||||||||     
T  11785655 ttatcatgttaatatgctaactttttaaaaaatatttcataatgtccgtaatttaaaaatgaaaatcaaaccctcccttctcttaccctcctaaaccctc 11785754  T
Q  101 aatccaaacacaccct 116  Q
     |||||||||||||||    
T  11785755 catccaaacacaccct 11785770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 16653084 - 16653190
Alignment:
Q  7 tgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatcca 106  Q
    |||||||||||||||||| | |||||||||||| | ||||| |||||||||||||||||  |||||||| |||||||||||||| |||||| || |||||    
T  16653084 tgttaatatgttaactttttcaaaaacatttcataatgtccgtaatttaaaaatgaaaattaaaccctctcctcccttcccctcttaaaccattcatcca 16653183  T
Q  107 aacacac 113  Q
    |||||||    
T  16653184 aacacac 16653190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 34634277 - 34634389
Alignment:
Q  6 atgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatcc 105  Q
    ||||||||||||||||||| ||||| | |||||| ||||||| |||||||||||| |||||  ||||||| | |||||||||||||||||| ||  ||||    
T  34634277 atgttaatatgttaactttttaaaagatatttcatagtgtccgtaatttaaaaataaaaaatgaaccctcacatcccttcccctcctaaactctccatcc 34634376  T
Q  106 aaacacaccctta 118  Q
    |||||||||||||    
T  34634377 aaacacaccctta 34634389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 31738552 - 31738667
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||| |  |||||| |||| | ||||||| ||||||||||||||||   ||||||||||||  ||||||||||||||||||     
T  31738552 ttatcatgttaatatgttaactcttcaaaaaatattttatagtgtccgtaatttaaaaatgaaatttaaaccctcccctttcttcccctcctaaaccctc 31738651  T
Q  101 aatccaaacacaccct 116  Q
     |||||||||||||||    
T  31738652 catccaaacacaccct 31738667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 36308972 - 36309081
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||| |||||  |||| | |||||||| ||| | ||||||||| |||||||  ||||||||||||||||||||||||||||||||     
T  36308972 ttatcatgttaatatgtttacttttaaaaatatatttcacaatgtacgtaatttaaagatgaaaagtaaaccctcccctcccttcccctcctaaaccctc 36309071  T
Q  101 aatccaaaca 110  Q
     |||||||||    
T  36309072 catccaaaca 36309081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 41103621 - 41103502
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataattt--aaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccc 98  Q
    ||||||||||| | | |||| ||| | |||||| ||||| ||||||||||||||  ||||| ||||| |||||||||||||| |||||||||||||||||    
T  41103621 ttatcatgttattgttttaatttttttaaaaacgtttcatagtgtccataatttttaaaaacgaaaatcaaaccctcccctctcttcccctcctaaaccc 41103522  T
Q  99 ttaatccaaacacaccctta 118  Q
    |  |||||||||||||||||    
T  41103521 tccatccaaacacaccctta 41103502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 27 - 118
Target Start/End: Original strand, 8815296 - 8815387
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    ||||||||||| ||||||| | |||||||||||| ||||   ||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  8815296 aaaaaacattttacagtgttcgtaatttaaaaattaaaagtgaaccctcccctccctccccctcctaaaccctcaatccaaacacaccctta 8815387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 11575521 - 11575415
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||| ||| |||||||| ||||||||  ||||||| ||||||||||| |||||||| |||     
T  11575521 ttatcatgttaatatgttaactttttaaaaaacatttcatagtatccttaatttaagaatgaaaagtaaaccct-ccctcccttcctctcctaaatcctc 11575423  T
Q  101 aatccaaa 108  Q
     |||||||    
T  11575422 catccaaa 11575415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 1281272 - 1281370
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccct 99  Q
    |||| ||||||||||||||||||| ||||||| |||||| ||||||| |||||||||||||||||  ||| |||||||||||||||  || ||||||||    
T  1281272 ttattatgttaatatgttaactttttaaaaaatatttcatagtgtccgtaatttaaaaatgaaaactaaatcctcccctcccttcctatcttaaaccct 1281370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 3726965 - 3726863
Alignment:
Q  14 atgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacac 113  Q
    ||||||||| | ||||||||||| ||  |||||| |||||||||||||||||| ||||| |||  |||||||||||||||||||||  ||||||||||||    
T  3726965 atgttaactatttaaaaaacattccatggtgtccgtaatttaaaaatgaaaaataaaccgtcctttcccttcccctcctaaaccctccatccaaacacac 3726866  T
Q  114 cct 116  Q
    |||    
T  3726865 cct 3726863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9718594 - 9718514
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcc 81  Q
    |||||||||||||||| ||||||| |||||| ||||||| ||||||| ||||||||||||||||| | |||||||||||||    
T  9718594 ttatcatgttaatatgctaactttttaaaaaccatttcatagtgtccgtaatttaaaaatgaaaatcgaaccctcccctcc 9718514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 31543244 - 31543316
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||||||||||||||| |||||  |||||||||||||||||||||||||||||||| |||| |||||||||||    
T  31543244 gtccataatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatcgaaacacaccct 31543316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 40990299 - 40990176
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaa--catttcacagtgtccataatttaaaaa-tgaaaaacaaaccctcccctcccttcccctcctaaacc 97  Q
    |||||||||||||||||||||| | |||||||  ||||||| |||||| |||| ||||||| ||||| | |||||||||||||| |||  |||| |||||    
T  40990299 ttatcatgttaatatgttaactctttaaaaaaaacatttcatagtgtctataaattaaaaaatgaaatataaaccctcccctcctttcttctcccaaacc 40990200  T
Q  98 cttaatccaaacacacccttagag 121  Q
    ||  ||||||||||||||||||||    
T  40990199 ctccatccaaacacacccttagag 40990176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 43732837 - 43732931
Alignment:
Q  22 tttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||| ||||| ||||| | | ||||| ||||||||||| |||||  ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  43732837 tttcaaaaaatcattttataatgtccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacaccct 43732931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 120
Target Start/End: Original strand, 12022298 - 12022391
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttaga 120  Q
    ||||||||||| ||| ||||| |||||||||||  ||||   | ||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  12022298 aaaaaacattttacattgtccgtaatttaaaaaataaaagtgagccctcccctcctttcccctcctaaaccctcaatccaaacacacccttaga 12022391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 112
Target Start/End: Complemental strand, 30479824 - 30479721
Alignment:
Q  9 ttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaa 108  Q
    |||||||||||||||| ||||| |||||||| ||||||  |||||||||||||||||   ||| ||||||||| | ||||||||||| |||  |||||||    
T  30479824 ttaatatgttaactttttaaaagacatttcatagtgtctgtaatttaaaaatgaaaagtgaactctcccctccatccccctcctaaatcctccatccaaa 30479725  T
Q  109 caca 112  Q
    ||||    
T  30479724 caca 30479721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 1027020 - 1027094
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||| ||||||||||| |||||   |||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  1027020 gtccgtaatttaaaaaagaaaagtgaacccttccctcccttcccttcctaaacccttaatccaaacacaccctta 1027094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 44 - 125
Target Start/End: Complemental strand, 1281215 - 1281134
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttagagaact 125  Q
    |||| ||||||||||| |||||  |||||||| | ||||||||||||||||||||| |||||||||| | ||||||||||||    
T  1281215 gtccgtaatttaaaaaagaaaagtaaaccctctcatcccttcccctcctaaaccctcaatccaaacaaatccttagagaact 1281134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 7503069 - 7502988
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctccc 82  Q
    |||||||||||||||||||||||| || ||||||||||| ||| |   ||||||||||||| ||| ||||||||||||||||    
T  7503069 ttatcatgttaatatgttaactttttataaaacatttcatagttttggtaatttaaaaatggaaagcaaaccctcccctccc 7502988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 1026964 - 1026884
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcc 81  Q
    ||||||||||||||||||||||||  | |||| |||||| |||||||  ||||||||||||||||  ||||||||||||||    
T  1026964 ttatcatgttaatatgttaacttttgataaaatatttcatagtgtccgcaatttaaaaatgaaaagtaaaccctcccctcc 1026884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 37923193 - 37923129
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaa 65  Q
    ||||||||||||||| |||||| | |||||||||||||| ||||| |||||||||||||||||||    
T  37923193 ttatcatgttaatattttaactctttaaaaaacatttcatagtgttcataatttaaaaatgaaaa 37923129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 45 - 116
Target Start/End: Original strand, 7503127 - 7503198
Alignment:
Q  45 tccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||||||||| |||||  ||||||||||||||| |||||||| ||| ||| ||||||||||||||||    
T  7503127 tccataatttaaaaacgaaaagtaaaccctcccctcccctcccctcccaaagcctcaatccaaacacaccct 7503198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 49 - 112
Target Start/End: Original strand, 11575583 - 11575646
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacaca 112  Q
    |||||||||||||||||  |||||||||||||||||| | ||||||||||| ||||||||||||    
T  11575583 taatttaaaaatgaaaagtaaaccctcccctcccttctcatcctaaaccctgaatccaaacaca 11575646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 9718654 - 9718723
Alignment:
Q  47 cataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||||||| |||||  ||||  |||||||||||| ||||||||||||| ||||||||||||||||    
T  9718654 cataatttaaaaaagaaaagtaaactttcccctcccttctcctcctaaaccctcaatccaaacacaccct 9718723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 16024304 - 16024400
Alignment:
Q  22 tttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    |||||||||| ||||| | | ||||| ||||||||||| |||||  |||| ||||||||||||||||||||||| |||  |||||||||||| |||||    
T  16024304 tttctaaaaatcattttataatgtccgtaatttaaaaa-gaaaagtaaactctcccctcccttcccctcctaaatcctccatccaaacacactcttag 16024400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 28083809 - 28083744
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacc 114  Q
    ||||||||||| ||||||||||  ||| ||||||||||||||||||||||| ||||| ||||||||    
T  28083809 taatttaaaaaagaaaaacaaaatctctcctcccttcccctcctaaaccctcaatccgaacacacc 28083744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 2248586 - 2248666
Alignment:
Q  6 atgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcc 86  Q
    ||||||||| |||||||||  |||||| |||||| ||||||| |||||||||||| ||||   ||||||||||||||||||    
T  2248586 atgttaataagttaacttttaaaaaaatatttcatagtgtccgtaatttaaaaataaaaagtgaaccctcccctcccttcc 2248666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 112
Target Start/End: Original strand, 10028259 - 10028363
Alignment:
Q  9 ttaatatgttaactttctaaaaaac-atttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaa 107  Q
    ||||||||||||||||  ||||||  |||||| ||||||| |||||||||| | ||||  ||||||||||||| ||||| ||||||||||||   |||||    
T  10028259 ttaatatgttaacttttaaaaaaaatatttcatagtgtccgtaatttaaaagtaaaaagtaaaccctcccctcacttcctctcctaaaccctctgtccaa 10028358  T
Q  108 acaca 112  Q
    |||||    
T  10028359 acaca 10028363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 30365280 - 30365376
Alignment:
Q  22 tttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||||||||| ||||||| | ||||  ||||||||||| |||||  || |||||||||||||| |||| ||||| |||  |||||||||||||||||    
T  30365280 tttctaaaaatcatttcataatgtctgtaatttaaaaaagaaaaggaagccctcccctcccttacccttctaaatcctccatccaaacacaccctta 30365376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 40990356 - 40990427
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||| ||||||||||| ||||||||||| ||| |||||||||| ||||| |||||| ||||||||||||||||    
T  40990356 gtccgtaatttaaaaaagaaaaacaaactctctcctcccttcctctcct-aaccctcaatccaaacacaccct 40990427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 11033546 - 11033645
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaa-aacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccct 99  Q
    |||||||||||||||||||| ||| ||||| ||||||||| | | | |||||||||||| ||||||  ||| | || ||||||||| |||||||||||||    
T  11033546 ttatcatgttaatatgttaattttttaaaaaaacatttcataatattcataatttaaaattgaaaagtaaatcttctcctcccttctcctcctaaaccct 11033645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 72 - 119
Target Start/End: Complemental strand, 43732723 - 43732676
Alignment:
Q  72 cctcccctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||    
T  43732723 cctcctctcccttcccctcctaaaccctcaatccaaacacacccttag 43732676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 6315191 - 6315257
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaac 67  Q
    |||||| ||||||||||||| ||| | |||||||||||| ||||||| || ||||||||||||||||    
T  6315191 ttatcaagttaatatgttaatttttttaaaaacatttcatagtgtccgtattttaaaaatgaaaaac 6315257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 7394638 - 7394706
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctt 117  Q
    |||||||||||  ||||   |||| |||||||||||||||||||||||||| |||||||||||| ||||    
T  7394638 taatttaaaaaataaaagtgaaccatcccctcccttcccctcctaaaccctcaatccaaacacatcctt 7394706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 7979269 - 7979333
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaa 65  Q
    |||||||||||||| |||||  || ||| ||||||||||| |||||| |||||||||||||||||    
T  7979269 ttatcatgttaataagttaaacttttaataaacatttcacggtgtccgtaatttaaaaatgaaaa 7979333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 2248519 - 2248452
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||||| | |||   ||| |||||||||||||||||||||||| || ||||||||||||||||    
T  2248519 taatttaaaaaaggaaattgaactctcccctcccttcccctcctaaactctcaatccaaacacaccct 2248452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 8815235 - 8815136
Alignment:
Q  22 tttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttagag 121  Q
    |||||||||| ||||| | | ||||| ||||||||||| |||||  ||  | || |||| ||||||||||||||||||  ||||||||||||||| ||||    
T  8815235 tttctaaaaatcattttataatgtccgtaatttaaaaaagaaaagtaagtcatcacctctcttcccctcctaaaccctccatccaaacacaccctaagag 8815136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 30365197 - 30365130
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||||||||||| ||||   ||| ||||||||| ||| ||||||||||||| ||||||||||||||||    
T  30365197 taatttaaaaattaaaagtgaactctcccctcctttctcctcctaaaccctcaatccaaacacaccct 30365130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 37032508 - 37032624
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataa--tttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccc 98  Q
    ||||||| |||||||||||||||| ||||||||| |||  ||||||| |||  ||| ||||  ||||  ||||||| |||  |||| | |||||||||||    
T  37032508 ttatcatcttaatatgttaactttttaaaaaacacttcctagtgtccgtaattttttaaaaaaaaaagtaaacccttccc-acctttctctcctaaaccc 37032606  T
Q  99 ttaatccaaacacaccct 116  Q
    | ||||||||||||||||    
T  37032607 tcaatccaaacacaccct 37032624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 16024196 - 16024155
Alignment:
Q  73 ctcccctcccttcccctcctaaacccttaatccaaacacacc 114  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
T  16024196 ctcccctcccttcccttcctaaaccctcaatccaaacacacc 16024155  T

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Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 34196459 - 34196558
Alignment:
Q  22 tttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttagag 121  Q
    |||||||||| ||||| | | ||||  ||||||||||| |||||  || |||||||| ||||||||||||||||||||  |||||||| |||||| ||||    
T  34196459 tttctaaaaatcattttataatgtctgtaatttaaaaa-gaaaagtaagccctcccc-cccttcccctcctaaaccctccatccaaacgcaccctaagag 34196556  T

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Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 37923255 - 37923320
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttccc-ctcctaaacccttaatccaaacacac 113  Q
    |||||||||||| || |  ||||||| || ||||||||| ||||||||||||||||||||||||||    
T  37923255 taatttaaaaataaatattaaacccttccatcccttccctctcctaaacccttaatccaaacacac 37923320  T

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Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 7979212 - 7979144
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacaca 112  Q
    |||| ||||||||||| |||||  |||| |||| ||||||||| || ||||||||| ||||||||||||    
T  7979212 gtccgtaatttaaaaaagaaaagtaaactctcctctcccttcctcttctaaaccctcaatccaaacaca 7979144  T

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Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 10028182 - 10028102
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttagagaac 124  Q
    |||| ||||||||||| |||||  |||  ||| |||||  ||||||||||||||||  ||||||||||| |||||||||||    
T  10028182 gtccgtaatttaaaaaagaaaagtaaaatctcacctcctatcccctcctaaaccctcgatccaaacacatccttagagaac 10028102  T

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Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 12022237 - 12022137
Alignment:
Q  22 tttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcct-aaacccttaatccaaacacacccttaga 120  Q
    |||||||||| ||||| | | ||| | ||||||||||| |||||  || ||||||||||||||||||| || |||||||  |||| |||||||||| |||    
T  12022237 tttctaaaaatcattttataatgttcgtaatttaaaaaagaaaagtaagccctcccctcccttccccttctcaaaccctccatcctaacacaccctaaga 12022138  T
Q  121 g 121  Q
    |    
T  12022137 g 12022137  T

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Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 43826421 - 43826333
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccc 115  Q
    ||||||||||| ||| ||| | ||||||| |||  |||||  ||| ||||||||| ||||||||||||| ||| |||| ||||||||||    
T  43826421 aaaaaacattttacattgttcgtaatttacaaaataaaaatgaactctcccctccattcccctcctaaatcctcaatctaaacacaccc 43826333  T

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Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 2481977 - 2482024
Alignment:
Q  76 ccctcccttcccctcctaaacccttaatccaaacacacccttagagaa 123  Q
    ||||||||||||||||||||||||  ||||||||| ||||| ||||||    
T  2481977 ccctcccttcccctcctaaaccctccatccaaacataccctaagagaa 2482024  T

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Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 116
Target Start/End: Original strand, 4247725 - 4247764
Alignment:
Q  77 cctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  4247725 cctcccttcccctcctaaaccttcaatccaaacacaccct 4247764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 116
Target Start/End: Complemental strand, 13405019 - 13404976
Alignment:
Q  73 ctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||| ||||||||||||||||||||| ||||||| ||||||||    
T  13405019 ctcccatcccttcccctcctaaaccctcaatccaaccacaccct 13404976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 81 - 119
Target Start/End: Complemental strand, 6315101 - 6315063
Alignment:
Q  81 ccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  6315101 ccttcgcctcctaaaccctcaatccaaacacacccttag 6315063  T

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Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 11033482 - 11033419
Alignment:
Q  51 atttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||| |||||  ||||||  ||||||||||| || ||||||||| ||||||||||||||||    
T  11033482 atttaaaaaagaaaagtaaaccc--ccctcccttcctcttctaaaccctcaatccaaacacaccct 11033419  T

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Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 30479897 - 30479959
Alignment:
Q  52 tttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacc 114  Q
    |||||||| |||||  ||||||||| |||| |||| ||| |||||||| ||||||||||||||    
T  30479897 tttaaaaaagaaaactaaaccctccgctccattcctctcataaaccctcaatccaaacacacc 30479959  T

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Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 30664490 - 30664560
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaac 71  Q
    ||||||| |||||||||||||||| ||||||| ||||   | ||||| |||||||||| ||||||| ||||    
T  30664490 ttatcatattaatatgttaactttttaaaaaatattttgtaatgtccgtaatttaaaactgaaaaataaac 30664560  T

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Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 121
Target Start/End: Complemental strand, 36308884 - 36308847
Alignment:
Q  84 tcccctcctaaacccttaatccaaacacacccttagag 121  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  36308884 tcccctcccaaacccttaatccaaacacaccctaagag 36308847  T

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Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 40633041 - 40632996
Alignment:
Q  71 ccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    |||||| ||||||||||||||||||||||  || ||||||||||||    
T  40633041 ccctcctctcccttcccctcctaaaccctccattcaaacacaccct 40632996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29358454 - 29358391
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaa 65  Q
    |||| ||||||||||||||| ||| ||||||| |||| | ||||||| |||||||||||| ||||    
T  29358454 ttataatgttaatatgttaatttt-taaaaaatattttatagtgtccgtaatttaaaaataaaaa 29358391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 30581985 - 30582033
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcct 92  Q
    |||| ||||||||||| |||||  || ||||||||||||||||||||||    
T  30581985 gtccgtaatttaaaaaagaaaagtaagccctcccctcccttcccctcct 30582033  T

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Target: scaffold0171 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 16082 - 16197
Alignment:
Q  4 tcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaat 103  Q
    |||| |||||||||||||||| |||||||||||||| | | ||| |||||||||||||||||| |||| ||  ||||||||||||||||||| |||  ||    
T  16082 tcatattaatatgttaactttttaaaaaacatttcataatatccgtaatttaaaaatgaaaaataaactctttcctcccttcccctcctaaatcctctat 16181  T
Q  104 ccaaacacacccttag 119  Q
    | ||||||| ||||||    
T  16182 cgaaacacaaccttag 16197  T

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Target: scaffold0198 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 3235 - 3150
Alignment:
Q  28 aaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacac 113  Q
    |||||||||||| ||||||  ||||||||||| |||||  |||| |||||||||||||||||||||||| || |||||||||||||    
T  3235 aaaaacatttcatagtgtctgtaatttaaaaaagaaaagtaaactctcccctcccttcccctcctaaactctcaatccaaacacac 3150  T

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Target: scaffold0026 (Bit Score: 49; Significance: 8e-19; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 1301 - 1381
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcc 81  Q
    ||||||||  |||||||||||||| |||||||||||||| ||||| |||||||||||||||||||  ||||| ||||||||    
T  1301 ttatcatgacaatatgttaactttttaaaaaacatttcatagtgttcataatttaaaaatgaaaagtaaaccttcccctcc 1381  T

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Target: scaffold0026; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 1244 - 1175
Alignment:
Q  44 gtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacac 113  Q
    |||| ||||||||||| |||||  |||| |||||||| |||||||||||||||||| |||||||||||||    
T  1244 gtccgtaatttaaaaaagaaaagtaaactctcccctctcttcccctcctaaaccctcaatccaaacacac 1175  T

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Target: scaffold0026; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 1554 - 1644
Alignment:
Q  28 aaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccctta 118  Q
    |||||||||| ||| ||| | |||||||||||  ||||   | ||||||||||| |||| |||||||||||| ||| ||||||||||||||    
T  1554 aaaaacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctccattcctctcctaaaccctcaattcaaacacaccctta 1644  T

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Target: scaffold0096 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 6651 - 6584
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccct 116  Q
    ||||||||||| |||||  |||||||||||||||||| ||||||||| | | ||||||||||||||||    
T  6651 taatttaaaaaagaaaagtaaaccctcccctcccttctcctcctaaaacttcaatccaaacacaccct 6584  T

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Target: scaffold0294 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 15392 - 15504
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctt 100  Q
    |||||| ||||||||||| || || ||||||||||| || ||||||| |||||||||||| ||||  | | ||||   ||||||||| |||||||||||     
T  15392 ttatcacgttaatatgttgaccttttaaaaaacatt-catagtgtccgtaatttaaaaataaaaagtagatcctcatttcccttcccttcctaaaccctc 15490  T
Q  101 aatccaaacacacc 114  Q
     |||||||||||||    
T  15491 catccaaacacacc 15504  T

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Target: scaffold0240 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 121
Target Start/End: Original strand, 17717 - 17787
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttagag 121  Q
    ||||||||||| |||||  ||||||  ||||||||||| ||||||||||||  ||||||||||||||||||||    
T  17717 taatttaaaaaagaaaagtaaaccc--ccctcccttccactcctaaaccctccatccaaacacacccttagag 17787  T

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Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 184778 - 184847
Alignment:
Q  43 tgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacaca 112  Q
    ||||||||||||||||| ||| |  |||||||||| |||||| ||||||||||||||  |||||||||||    
T  184778 tgtccataatttaaaaaagaatagtaaaccctcccttccctttccctcctaaaccctccatccaaacaca 184847  T

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Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 116
Target Start/End: Complemental strand, 184643 - 184611
Alignment:
Q  84 tcccctcctaaacccttaatccaaacacaccct 116  Q
    |||||||||||||||| ||||||||||||||||    
T  184643 tcccctcctaaaccctcaatccaaacacaccct 184611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 112
Target Start/End: Original strand, 242370 - 242456
Alignment:
Q  26 taaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacaca 112  Q
    |||||| ||||| | | ||||| ||||||||||| |||||  ||||||||||||||||||||||  |||||| |  |||||||||||    
T  242370 taaaaatcattttataatgtccgtaatttaaaaaagaaaagtaaaccctcccctcccttccccttataaaccatccatccaaacaca 242456  T

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Target: scaffold0341 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 18898 - 18987
Alignment:
Q  1 ttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctc 90  Q
    ||||||||||||||| |||||||  ||||||| | |||| |||||||   |||||||||||||||  |||||||| ||| | ||||||||    
T  18898 ttatcatgttaatatattaacttcttaaaaaatagttcatagtgtcctcgatttaaaaatgaaaagtaaaccctctccttctttcccctc 18987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 30804 - 30712
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    ||||||||||| ||| ||| | |||||||||||  ||||   | ||||||||||||||  ||||||||| ||| ||||||||| |||||||||    
T  30804 aaaaaacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttgtcctcctaaatcctcaatccaaacgcacccttag 30712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 37472 - 37380
Alignment:
Q  27 aaaaaacatttcacagtgtccataatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttag 119  Q
    ||||||||||| ||| ||| | |||||||||||  ||||   | ||||||||| |||| |||||||||| ||| ||| ||||| |||||||||    
T  37472 aaaaaacattttacattgttcgtaatttaaaaaataaaagtgagccctccccttccttgccctcctaaatcctcaattcaaacgcacccttag 37380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 49 - 121
Target Start/End: Complemental strand, 122051 - 121980
Alignment:
Q  49 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttagag 121  Q
    |||||| |||| ||||| |||| ||||||||| || |  |||||||||||| |||||||||||||| ||||||    
T  122051 taattttaaaaagaaaagcaaatcctcccctctct-cttctcctaaaccctcaatccaaacacacctttagag 121980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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