View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11207_high_20 (Length: 443)

Name: NF11207_high_20
Description: NF11207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11207_high_20
NF11207_high_20
[»] chr5 (71 HSPs)
chr5 (17-341)||(14244790-14245137)
chr5 (294-443)||(13634713-13634861)
chr5 (294-443)||(7544138-7544286)
chr5 (294-443)||(26414895-26415043)
chr5 (355-443)||(9856942-9857030)
chr5 (294-443)||(16938481-16938629)
chr5 (368-443)||(10072741-10072816)
chr5 (296-430)||(2550459-2550592)
chr5 (294-439)||(10476028-10476174)
chr5 (355-443)||(36392244-36392331)
chr5 (355-443)||(37551470-37551557)
chr5 (355-443)||(37606957-37607044)
chr5 (355-443)||(37654300-37654387)
chr5 (294-443)||(28279570-28279719)
chr5 (355-443)||(4373660-4373748)
chr5 (355-443)||(8502929-8503017)
chr5 (364-443)||(36363103-36363182)
chr5 (372-443)||(37779182-37779253)
chr5 (355-440)||(11756939-11757024)
chr5 (368-443)||(17024318-17024393)
chr5 (356-441)||(42681516-42681601)
chr5 (366-433)||(9798716-9798783)
chr5 (366-436)||(14681542-14681612)
chr5 (292-419)||(22022847-22022976)
chr5 (375-443)||(20513539-20513611)
chr5 (294-340)||(14245242-14245288)
chr5 (377-443)||(16501884-16501950)
chr5 (292-341)||(1658008-1658057)
chr5 (390-443)||(20146960-20147013)
chr5 (294-430)||(40815299-40815433)
chr5 (355-410)||(10650491-10650546)
chr5 (294-337)||(13634910-13634953)
chr5 (384-439)||(29002304-29002359)
chr5 (366-428)||(33424911-33424973)
chr5 (294-331)||(20147075-20147112)
chr5 (292-340)||(7544332-7544380)
chr5 (294-329)||(5688597-5688632)
chr5 (294-337)||(10204578-10204621)
chr5 (294-341)||(10476223-10476270)
chr5 (292-331)||(34980810-34980849)
chr5 (295-341)||(11757098-11757144)
chr5 (297-335)||(36363233-36363271)
chr5 (297-330)||(11436944-11436977)
chr5 (294-327)||(15986833-15986866)
chr5 (370-431)||(34980887-34980948)
chr5 (355-428)||(39966061-39966134)
chr5 (294-331)||(40305672-40305709)
chr5 (294-331)||(40305870-40305907)
chr5 (292-341)||(42681448-42681497)
chr5 (370-418)||(10204653-10204701)
chr5 (295-327)||(14681473-14681505)
chr5 (295-331)||(21581152-21581188)
chr5 (371-431)||(33744299-33744359)
chr5 (292-331)||(8551623-8551662)
chr5 (367-431)||(14684588-14684654)
chr5 (294-341)||(16938674-16938721)
chr5 (294-324)||(9856892-9856922)
chr5 (362-431)||(13298335-13298402)
chr5 (294-336)||(15986626-15986668)
chr5 (293-331)||(16501997-16502035)
chr5 (409-443)||(22023483-22023517)
chr5 (370-415)||(5688490-5688535)
chr5 (370-431)||(10043329-10043390)
chr5 (370-431)||(21581024-21581085)
chr5 (297-342)||(36363037-36363082)
chr5 (297-330)||(36392355-36392388)
chr5 (383-431)||(1977622-1977670)
chr5 (294-334)||(10650616-10650656)
chr5 (294-330)||(12035938-12035974)
chr5 (370-418)||(15986743-15986791)
chr5 (366-418)||(27110101-27110153)
[»] chr2 (72 HSPs)
chr2 (294-443)||(36347635-36347783)
chr2 (355-441)||(2241472-2241558)
chr2 (355-443)||(39732823-39732910)
chr2 (294-440)||(15224791-15224936)
chr2 (366-443)||(16565850-16565927)
chr2 (362-443)||(23748164-23748245)
chr2 (355-443)||(19566915-19567003)
chr2 (295-443)||(36566945-36567093)
chr2 (377-443)||(37739985-37740051)
chr2 (355-443)||(12541827-12541916)
chr2 (378-443)||(17379897-17379962)
chr2 (355-424)||(40022432-40022501)
chr2 (294-443)||(9426987-9427135)
chr2 (355-443)||(39821731-39821819)
chr2 (294-418)||(41778775-41778898)
chr2 (294-418)||(35736177-35736300)
chr2 (367-433)||(8426975-8427041)
chr2 (369-431)||(31795875-31795937)
chr2 (389-443)||(34209560-34209614)
chr2 (368-432)||(18811404-18811467)
chr2 (363-443)||(28262537-28262617)
chr2 (366-443)||(29525825-29525904)
chr2 (364-431)||(3094459-3094526)
chr2 (392-443)||(42316858-42316909)
chr2 (385-443)||(9631652-9631710)
chr2 (294-340)||(17379848-17379894)
chr2 (367-428)||(886990-887051)
chr2 (366-443)||(32503232-32503309)
chr2 (294-339)||(42296500-42296545)
chr2 (374-442)||(6721717-6721785)
chr2 (377-425)||(12751899-12751947)
chr2 (293-443)||(36046298-36046444)
chr2 (356-423)||(7681311-7681378)
chr2 (364-427)||(41841753-41841816)
chr2 (383-432)||(20545799-20545848)
chr2 (294-339)||(22356201-22356246)
chr2 (294-339)||(23748292-23748337)
chr2 (370-431)||(45098246-45098307)
chr2 (366-441)||(39354270-39354345)
chr2 (294-340)||(17380037-17380083)
chr2 (370-428)||(45257384-45257442)
chr2 (370-415)||(2381109-2381154)
chr2 (292-341)||(8427066-8427115)
chr2 (294-339)||(9631757-9631802)
chr2 (370-431)||(31061436-31061497)
chr2 (387-431)||(887210-887254)
chr2 (370-418)||(21662328-21662375)
chr2 (292-340)||(41841682-41841730)
chr2 (295-330)||(12541773-12541808)
chr2 (372-419)||(21745248-21745295)
chr2 (408-443)||(27926668-27926703)
chr2 (298-341)||(31061555-31061598)
chr2 (385-432)||(31928149-31928196)
chr2 (300-331)||(33265615-33265646)
chr2 (377-432)||(35325353-35325408)
chr2 (294-337)||(35736386-35736429)
chr2 (294-341)||(45257502-45257549)
chr2 (378-428)||(33265691-33265741)
chr2 (294-328)||(40022365-40022399)
chr2 (371-425)||(42537859-42537912)
chr2 (292-341)||(2241411-2241459)
chr2 (294-331)||(3094558-3094595)
chr2 (292-329)||(16713492-16713529)
chr2 (294-335)||(16713726-16713767)
chr2 (370-415)||(17333933-17333978)
chr2 (370-415)||(22356042-22356087)
chr2 (298-331)||(31795969-31796002)
chr2 (292-341)||(35531851-35531900)
chr2 (294-335)||(36347543-36347584)
chr2 (296-328)||(2380996-2381028)
chr2 (293-325)||(7681259-7681291)
chr2 (355-399)||(9591973-9592017)
[»] chr1 (58 HSPs)
chr1 (294-443)||(30010334-30010482)
chr1 (294-443)||(32951412-32951560)
chr1 (294-443)||(35349556-35349704)
chr1 (362-443)||(51597737-51597818)
chr1 (299-443)||(2859026-2859169)
chr1 (355-443)||(50744375-50744463)
chr1 (355-443)||(45585779-45585867)
chr1 (295-441)||(38509990-38510135)
chr1 (363-443)||(40095027-40095108)
chr1 (294-443)||(41498406-41498554)
chr1 (355-443)||(10391934-10392022)
chr1 (363-443)||(49946682-49946762)
chr1 (364-443)||(8529870-8529949)
chr1 (294-443)||(12234012-12234160)
chr1 (377-441)||(41676363-41676427)
chr1 (365-431)||(44211011-44211077)
chr1 (374-443)||(36285668-36285737)
chr1 (374-443)||(42230619-42230688)
chr1 (368-443)||(26940937-26941012)
chr1 (374-443)||(7444576-7444645)
chr1 (363-443)||(6563647-6563726)
chr1 (368-431)||(42742416-42742478)
chr1 (364-437)||(2470831-2470908)
chr1 (370-429)||(1085598-1085657)
chr1 (294-341)||(12234205-12234252)
chr1 (294-341)||(20607412-20607459)
chr1 (294-337)||(26324016-26324059)
chr1 (367-428)||(50079493-50079554)
chr1 (294-334)||(1085692-1085732)
chr1 (399-443)||(20576225-20576269)
chr1 (370-418)||(33643345-33643393)
chr1 (367-418)||(2506613-2506664)
chr1 (294-341)||(2858934-2858981)
chr1 (368-431)||(27739127-27739189)
chr1 (294-341)||(30010527-30010574)
chr1 (372-431)||(35927892-35927951)
chr1 (294-341)||(40094935-40094982)
chr1 (294-337)||(51303386-51303429)
chr1 (295-341)||(20576136-20576182)
chr1 (377-431)||(51303490-51303544)
chr1 (294-331)||(20607225-20607262)
chr1 (370-427)||(25268341-25268398)
chr1 (294-327)||(26941042-26941075)
chr1 (296-337)||(35512996-35513037)
chr1 (294-339)||(38509896-38509941)
chr1 (367-415)||(49832621-49832669)
chr1 (294-329)||(525307-525342)
chr1 (294-337)||(35927816-35927859)
chr1 (295-338)||(40709489-40709532)
chr1 (386-417)||(49065548-49065579)
chr1 (384-431)||(51582072-51582119)
chr1 (368-418)||(51303695-51303744)
chr1 (385-434)||(20607311-20607360)
chr1 (296-341)||(49946783-49946828)
chr1 (294-326)||(2470732-2470764)
chr1 (295-327)||(2470934-2470966)
chr1 (292-324)||(33643469-33643501)
chr1 (366-418)||(43553049-43553101)
[»] chr7 (74 HSPs)
chr7 (295-443)||(33655202-33655349)
chr7 (294-443)||(1051593-1051740)
chr7 (362-443)||(25887261-25887342)
chr7 (355-443)||(24970259-24970347)
chr7 (355-443)||(40196626-40196714)
chr7 (364-443)||(34228412-34228491)
chr7 (355-441)||(41497053-41497139)
chr7 (294-443)||(13771040-13771188)
chr7 (355-443)||(34235101-34235190)
chr7 (294-442)||(47390857-47391005)
chr7 (368-440)||(22163206-22163278)
chr7 (368-440)||(22221914-22221986)
chr7 (294-427)||(39855975-39856107)
chr7 (355-443)||(43230298-43230386)
chr7 (355-443)||(41008244-41008331)
chr7 (362-443)||(37417727-37417808)
chr7 (355-443)||(40572328-40572416)
chr7 (355-431)||(17852933-17853009)
chr7 (365-443)||(4833625-4833703)
chr7 (364-441)||(26365839-26365916)
chr7 (294-436)||(31571569-31571712)
chr7 (384-439)||(13425218-13425273)
chr7 (377-431)||(18063667-18063721)
chr7 (294-339)||(37925843-37925888)
chr7 (363-436)||(45940757-45940830)
chr7 (379-443)||(32872875-32872939)
chr7 (367-431)||(33519122-33519186)
chr7 (368-431)||(7791794-7791857)
chr7 (400-443)||(18231693-18231736)
chr7 (294-337)||(36267752-36267795)
chr7 (379-441)||(10315719-10315781)
chr7 (295-333)||(31364247-31364285)
chr7 (370-431)||(35422041-35422102)
chr7 (363-416)||(42306404-42306457)
chr7 (368-441)||(48152055-48152127)
chr7 (298-341)||(4833537-4833580)
chr7 (294-341)||(13770950-13770997)
chr7 (389-432)||(18127347-18127390)
chr7 (385-432)||(20393693-20393740)
chr7 (294-337)||(33519247-33519290)
chr7 (294-337)||(36267555-36267598)
chr7 (292-331)||(37620774-37620813)
chr7 (396-439)||(47229930-47229973)
chr7 (377-431)||(23116366-23116420)
chr7 (294-336)||(25887194-25887236)
chr7 (366-436)||(30891096-30891165)
chr7 (298-340)||(40282203-40282245)
chr7 (294-331)||(28074105-28074142)
chr7 (294-331)||(41496959-41496996)
chr7 (366-443)||(42087068-42087145)
chr7 (294-331)||(48881560-48881597)
chr7 (294-327)||(48881758-48881791)
chr7 (363-442)||(23029435-23029508)
chr7 (294-338)||(31553187-31553230)
chr7 (294-341)||(18231781-18231828)
chr7 (384-431)||(19261945-19261992)
chr7 (294-337)||(28074307-28074350)
chr7 (364-431)||(38378116-38378183)
chr7 (294-341)||(40196534-40196581)
chr7 (295-342)||(42306524-42306571)
chr7 (377-428)||(48093977-48094028)
chr7 (370-428)||(3143557-3143615)
chr7 (292-322)||(24970379-24970409)
chr7 (294-324)||(37417835-37417865)
chr7 (294-336)||(39646471-39646513)
chr7 (294-340)||(47391052-47391098)
chr7 (294-327)||(13425122-13425155)
chr7 (383-416)||(33519416-33519449)
chr7 (370-431)||(37620851-37620912)
chr7 (292-341)||(47230014-47230063)
chr7 (367-431)||(21857421-21857485)
chr7 (295-330)||(26365770-26365806)
chr7 (297-337)||(33519053-33519093)
chr7 (296-324)||(39646671-39646699)
[»] chr4 (73 HSPs)
chr4 (294-443)||(1968453-1968601)
chr4 (296-443)||(27735749-27735895)
chr4 (294-440)||(31348418-31348563)
chr4 (355-443)||(35248748-35248836)
chr4 (363-443)||(36151646-36151726)
chr4 (294-443)||(26166939-26167087)
chr4 (295-443)||(5730924-5731072)
chr4 (355-443)||(45741952-45742040)
chr4 (294-443)||(54320437-54320584)
chr4 (295-443)||(46007795-46007942)
chr4 (294-443)||(54935069-54935219)
chr4 (355-436)||(37711205-37711286)
chr4 (364-443)||(16400871-16400950)
chr4 (362-439)||(2917061-2917138)
chr4 (366-441)||(6891433-6891508)
chr4 (362-443)||(49735562-49735643)
chr4 (355-443)||(41174407-41174495)
chr4 (383-443)||(45132595-45132655)
chr4 (294-434)||(56135751-56135890)
chr4 (367-442)||(44784066-44784141)
chr4 (364-437)||(28332875-28332948)
chr4 (385-441)||(17938203-17938259)
chr4 (294-425)||(47433820-47433951)
chr4 (366-441)||(2247899-2247973)
chr4 (372-431)||(34995130-34995189)
chr4 (294-341)||(49735687-49735734)
chr4 (294-340)||(54320630-54320676)
chr4 (366-424)||(54494712-54494769)
chr4 (355-443)||(24565440-24565526)
chr4 (370-431)||(43961487-43961548)
chr4 (294-339)||(49735470-49735515)
chr4 (370-431)||(55510247-55510308)
chr4 (291-339)||(27735942-27735990)
chr4 (294-341)||(37711318-37711365)
chr4 (294-341)||(54935264-54935311)
chr4 (385-443)||(34110897-34110955)
chr4 (377-431)||(47846161-47846215)
chr4 (364-428)||(22921052-22921117)
chr4 (364-428)||(22970682-22970747)
chr4 (368-431)||(18516577-18516640)
chr4 (363-431)||(29798358-29798422)
chr4 (294-341)||(41174540-41174587)
chr4 (370-428)||(17182594-17182652)
chr4 (292-341)||(6938281-6938330)
chr4 (294-339)||(7977694-7977739)
chr4 (370-431)||(22186796-22186857)
chr4 (292-341)||(47846251-47846300)
chr4 (294-331)||(53260720-53260757)
chr4 (292-337)||(54576327-54576372)
chr4 (294-339)||(55080581-55080626)
chr4 (386-418)||(21695008-21695040)
chr4 (389-432)||(41227576-41227619)
chr4 (294-341)||(45132690-45132737)
chr4 (294-325)||(45741892-45741923)
chr4 (297-331)||(34110803-34110837)
chr4 (299-337)||(35565565-35565603)
chr4 (294-324)||(41174358-41174388)
chr4 (294-336)||(44145775-44145817)
chr4 (378-431)||(14539357-14539410)
chr4 (294-331)||(22186721-22186758)
chr4 (385-418)||(23332653-23332686)
chr4 (355-432)||(23813163-23813240)
chr4 (292-329)||(47846470-47846507)
chr4 (370-434)||(54001206-54001271)
chr4 (370-431)||(55080656-55080717)
chr4 (294-326)||(2248011-2248043)
chr4 (362-418)||(5307077-5307132)
chr4 (295-331)||(16400803-16400839)
chr4 (298-326)||(27775589-27775617)
chr4 (294-326)||(29798290-29798322)
chr4 (384-432)||(34108331-34108379)
chr4 (379-431)||(47694435-47694487)
chr4 (294-326)||(51329798-51329830)
[»] chr8 (72 HSPs)
chr8 (294-443)||(7503048-7503196)
chr8 (294-443)||(31543166-31543314)
chr8 (355-443)||(1026943-1027030)
chr8 (356-441)||(6315125-6315210)
chr8 (366-443)||(11575500-11575577)
chr8 (355-430)||(42650443-42650518)
chr8 (298-443)||(1281149-1281293)
chr8 (355-443)||(16653011-16653099)
chr8 (363-443)||(37032449-37032529)
chr8 (355-443)||(40990278-40990366)
chr8 (292-443)||(28083742-28083892)
chr8 (365-432)||(41103611-41103678)
chr8 (355-441)||(7979202-7979288)
chr8 (294-443)||(9718573-9718721)
chr8 (363-439)||(36308912-36308989)
chr8 (355-443)||(11785588-11785676)
chr8 (363-443)||(31738493-31738573)
chr8 (362-441)||(11033486-11033565)
chr8 (362-443)||(33922589-33922670)
chr8 (363-443)||(30664431-30664511)
chr8 (363-443)||(37923172-37923252)
chr8 (366-441)||(29358435-29358510)
chr8 (374-443)||(4247611-4247680)
chr8 (363-433)||(3726959-3727029)
chr8 (363-441)||(13405046-13405124)
chr8 (294-431)||(12022249-12022385)
chr8 (374-443)||(30479811-30479880)
chr8 (294-443)||(2248454-2248602)
chr8 (368-431)||(27487065-27487128)
chr8 (392-443)||(29691016-29691067)
chr8 (294-341)||(43732882-43732929)
chr8 (294-339)||(8815338-8815383)
chr8 (355-424)||(10028172-10028241)
chr8 (369-429)||(27483636-27483696)
chr8 (383-431)||(30581916-30581964)
chr8 (375-415)||(34633819-34633859)
chr8 (294-330)||(43732681-43732717)
chr8 (296-331)||(7394666-7394701)
chr8 (385-432)||(24243152-24243199)
chr8 (298-341)||(36309038-36309081)
chr8 (368-431)||(38198155-38198217)
chr8 (294-340)||(41103506-41103552)
chr8 (294-331)||(4247725-4247762)
chr8 (294-331)||(16024155-16024192)
chr8 (367-431)||(16024227-16024292)
chr8 (377-418)||(35694874-35694915)
chr8 (294-342)||(31738617-31738665)
chr8 (294-329)||(3726865-3726900)
chr8 (377-432)||(6453268-6453323)
chr8 (294-329)||(13404978-13405013)
chr8 (295-342)||(16653143-16653190)
chr8 (298-341)||(31543078-31543121)
chr8 (372-418)||(1227884-1227930)
chr8 (295-341)||(16024348-16024394)
chr8 (294-340)||(40990380-40990425)
chr8 (294-331)||(1027053-1027090)
chr8 (298-331)||(2481978-2482011)
chr8 (294-327)||(6315068-6315101)
chr8 (294-331)||(8815143-8815180)
chr8 (294-331)||(11033421-11033458)
chr8 (296-341)||(11575601-11575646)
chr8 (294-331)||(30365132-30365169)
chr8 (294-339)||(34634340-34634385)
chr8 (370-431)||(43826409-43826470)
chr8 (295-331)||(2412967-2413003)
chr8 (370-418)||(8671913-8671961)
chr8 (383-431)||(26167846-26167894)
chr8 (368-428)||(34552637-34552696)
chr8 (294-330)||(40632998-40633034)
chr8 (368-428)||(42919838-42919897)
chr8 (384-428)||(43732778-43732822)
chr8 (294-338)||(44119744-44119788)
[»] chr3 (80 HSPs)
chr3 (294-443)||(24560219-24560367)
chr3 (355-443)||(21773844-21773932)
chr3 (355-443)||(41110415-41110503)
chr3 (295-443)||(18654694-18654842)
chr3 (294-443)||(25655064-25655214)
chr3 (355-440)||(27542028-27542113)
chr3 (374-443)||(36568997-36569066)
chr3 (363-443)||(14898046-14898126)
chr3 (367-443)||(16275799-16275875)
chr3 (378-443)||(9312565-9312630)
chr3 (355-440)||(46204948-46205033)
chr3 (355-443)||(220491-220579)
chr3 (355-443)||(41040044-41040132)
chr3 (365-443)||(2387854-2387932)
chr3 (377-443)||(52185100-52185166)
chr3 (355-443)||(52473977-52474065)
chr3 (294-436)||(28582610-28582751)
chr3 (355-443)||(30200182-30200273)
chr3 (355-443)||(37102243-37102331)
chr3 (364-443)||(43005833-43005912)
chr3 (389-443)||(37807176-37807230)
chr3 (366-434)||(51819228-51819296)
chr3 (377-432)||(40463976-40464031)
chr3 (363-443)||(46556213-46556295)
chr3 (363-434)||(54574464-54574535)
chr3 (363-441)||(651801-651879)
chr3 (355-417)||(10748417-10748479)
chr3 (389-443)||(13082956-13083010)
chr3 (370-431)||(16884077-16884138)
chr3 (298-339)||(27541937-27541978)
chr3 (370-431)||(40858642-40858703)
chr3 (371-431)||(10943720-10943780)
chr3 (365-441)||(12790444-12790520)
chr3 (368-432)||(47989070-47989133)
chr3 (368-432)||(47998357-47998420)
chr3 (368-432)||(48007644-48007707)
chr3 (355-435)||(55327432-55327512)
chr3 (295-342)||(6803395-6803442)
chr3 (294-337)||(34641189-34641232)
chr3 (294-341)||(41110323-41110370)
chr3 (356-431)||(45663250-45663324)
chr3 (368-431)||(54996786-54996848)
chr3 (296-331)||(55428584-55428619)
chr3 (370-428)||(26135874-26135932)
chr3 (377-431)||(44412445-44412499)
chr3 (368-418)||(49815497-49815546)
chr3 (296-341)||(10748299-10748344)
chr3 (370-431)||(21090177-21090238)
chr3 (295-336)||(21090271-21090312)
chr3 (294-331)||(24253723-24253760)
chr3 (369-406)||(31684362-31684399)
chr3 (378-431)||(34641077-34641130)
chr3 (294-327)||(37102348-37102381)
chr3 (371-432)||(37237001-37237061)
chr3 (370-431)||(41414155-41414216)
chr3 (367-428)||(42699721-42699782)
chr3 (370-431)||(46978504-46978565)
chr3 (370-427)||(48683689-48683746)
chr3 (371-431)||(8432365-8432425)
chr3 (292-336)||(42772044-42772088)
chr3 (294-341)||(5903551-5903598)
chr3 (296-331)||(17474411-17474446)
chr3 (296-331)||(31664391-31664426)
chr3 (296-331)||(31931970-31932005)
chr3 (384-431)||(42772123-42772170)
chr3 (294-329)||(54574563-54574598)
chr3 (294-328)||(651742-651776)
chr3 (292-330)||(14897895-14897933)
chr3 (370-428)||(17474315-17474373)
chr3 (295-341)||(28581189-28581235)
chr3 (294-324)||(34641004-34641034)
chr3 (294-336)||(44412363-44412405)
chr3 (297-330)||(14897981-14898014)
chr3 (294-331)||(24253927-24253964)
chr3 (292-341)||(26135992-26136041)
chr3 (369-406)||(31894019-31894056)
chr3 (370-431)||(36727254-36727314)
chr3 (294-330)||(41110527-41110563)
chr3 (292-336)||(44412561-44412605)
chr3 (296-324)||(46978441-46978469)
[»] scaffold0262 (1 HSPs)
scaffold0262 (362-442)||(16391-16471)
[»] chr6 (61 HSPs)
chr6 (355-443)||(33236013-33236101)
chr6 (295-436)||(19278139-19278278)
chr6 (295-439)||(30487403-30487546)
chr6 (294-433)||(12811085-12811222)
chr6 (377-443)||(4097606-4097672)
chr6 (363-441)||(31849180-31849258)
chr6 (355-440)||(5585399-5585484)
chr6 (355-443)||(34176397-34176485)
chr6 (362-441)||(2892699-2892778)
chr6 (364-443)||(21606938-21607017)
chr6 (294-443)||(14515475-14515621)
chr6 (355-443)||(1300681-1300770)
chr6 (294-443)||(9719125-9719272)
chr6 (366-441)||(13583792-13583867)
chr6 (362-443)||(25741476-25741557)
chr6 (366-441)||(16738092-16738167)
chr6 (355-443)||(1390381-1390469)
chr6 (362-443)||(9721232-9721312)
chr6 (363-415)||(2893700-2893752)
chr6 (355-443)||(10348892-10348981)
chr6 (294-335)||(15323227-15323268)
chr6 (294-335)||(15353366-15353407)
chr6 (367-431)||(26318379-26318443)
chr6 (364-432)||(32926716-32926784)
chr6 (400-443)||(2900017-2900060)
chr6 (294-341)||(9721140-9721187)
chr6 (366-441)||(30850008-30850083)
chr6 (383-441)||(665937-665995)
chr6 (356-441)||(1395698-1395784)
chr6 (295-341)||(9719034-9719080)
chr6 (363-408)||(6034201-6034246)
chr6 (294-331)||(10818231-10818268)
chr6 (392-441)||(10818315-10818364)
chr6 (355-432)||(14548711-14548788)
chr6 (294-339)||(30487308-30487353)
chr6 (294-341)||(10818411-10818458)
chr6 (294-337)||(23090997-23091040)
chr6 (385-432)||(32922437-32922484)
chr6 (363-443)||(33041540-33041612)
chr6 (368-418)||(16509356-16509405)
chr6 (295-341)||(31849113-31849159)
chr6 (395-432)||(2892948-2892985)
chr6 (294-327)||(4097237-4097270)
chr6 (294-331)||(9051737-9051774)
chr6 (363-443)||(25747403-25747484)
chr6 (295-331)||(4097718-4097754)
chr6 (297-341)||(19278039-19278083)
chr6 (370-413)||(382978-383021)
chr6 (388-431)||(3023607-3023650)
chr6 (294-341)||(14515666-14515713)
chr6 (295-330)||(21607050-21607085)
chr6 (384-443)||(29490489-29490548)
chr6 (294-324)||(1300631-1300661)
chr6 (377-415)||(5381305-5381343)
chr6 (294-339)||(665843-665887)
chr6 (292-333)||(1390522-1390563)
chr6 (383-432)||(17155446-17155495)
chr6 (300-337)||(23091158-23091195)
chr6 (374-415)||(25468521-25468562)
chr6 (295-327)||(5585304-5585336)
chr6 (294-334)||(31798920-31798960)
[»] scaffold0067 (1 HSPs)
scaffold0067 (294-443)||(39281-39432)
[»] scaffold0294 (1 HSPs)
scaffold0294 (369-439)||(15339-15409)
[»] scaffold0171 (1 HSPs)
scaffold0171 (363-443)||(16020-16100)
[»] scaffold0096 (1 HSPs)
scaffold0096 (294-441)||(6586-6731)
[»] scaffold0341 (1 HSPs)
scaffold0341 (363-443)||(18840-18919)
[»] scaffold0018 (1 HSPs)
scaffold0018 (366-428)||(69316-69378)
[»] scaffold0198 (1 HSPs)
scaffold0198 (295-341)||(3150-3196)
[»] scaffold0026 (1 HSPs)
scaffold0026 (295-341)||(1175-1221)
[»] scaffold0006 (1 HSPs)
scaffold0006 (384-432)||(81516-81564)
[»] scaffold0012 (2 HSPs)
scaffold0012 (294-324)||(184613-184643)
scaffold0012 (296-341)||(184802-184847)
[»] scaffold0240 (1 HSPs)
scaffold0240 (294-331)||(17743-17780)
[»] scaffold0119 (1 HSPs)
scaffold0119 (370-431)||(37460-37521)
[»] scaffold0783 (1 HSPs)
scaffold0783 (384-432)||(6015-6063)
[»] scaffold0071 (1 HSPs)
scaffold0071 (294-326)||(52898-52930)
[»] scaffold0027 (1 HSPs)
scaffold0027 (292-320)||(121985-122013)
[»] scaffold0004 (1 HSPs)
scaffold0004 (392-432)||(100653-100693)


Alignment Details
Target: chr5 (Bit Score: 257; Significance: 1e-143; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 17 - 341
Target Start/End: Original strand, 14244790 - 14245137
Alignment:
Q  17 caaagaaggcttggcagctctgttgttctggacttcattacggaagatttggttttttagagcttagcatttcacccaatgactgtggtgacgtctgctc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14244790 caaagaaggcttggcagctctgttgttctggacttcattacggaagatttggttttttagagcttagcatttcacccaatgactgtggtgacgtctgctc 14244889  T
Q  117 aatctttcttcaacgaatttaattctgctcaacctttgaaagctagtctcactaacagtgcaatccagctctcttgggaagcccctctggagaattttct 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14244890 aatctttcttcaacgaatttaattctgctcaacctttgaaagctagtctcactaacagtgcaatccagctctcttgggaagcccctctggagaattttct 14244989  T
Q  217 caaggtg---------------aacggacgcgacaggcaggtgttttggggcctggttattagaaatcatagagcagaagtggtatatgc--------aa 293  Q
    |||||||               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |     
T  14244990 caaggtgaacattgatgcaggcaacggacgcgacaggcaggtgttttggggcctggttattagaaatcatagagcagaagtggtatatgcagcctctaag 14245089  T
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||    
T  14245090 ggtgtgtttggattgagggtttaggaggggaagggaggggaggattta 14245137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 294 - 443
Target Start/End: Original strand, 13634713 - 13634861
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||             |||| | ||||||||||| ||||||||||||||||||||    
T  13634713 ggtgtgtttggattgagggtttaggaggggaagggaggggagggttta-cttttcttttttaaataacggactatataacatgtttttctaaaataaatt 13634811  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    | ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  13634812 atgtgtgattgaattattatatgatcgtttatcatgttaatatgttaact 13634861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 294 - 443
Target Start/End: Original strand, 7544138 - 7544286
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| | ||            |||||| ||||||||||| |||||||||||||||||||     
T  7544138 ggtgtgtttggattgagggtttaggaagggaagggaggggagggct-aaattttcttttttaaattacggactatataacatgtttttctaaaataaatc 7544236  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  7544237 aagtgtgattgaagtattatatgattgtttattatgttaatatgctaact 7544286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 294 - 443
Target Start/End: Original strand, 26414895 - 26415043
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||             |||||| ||||||||| | |||||||||||||||| |||    
T  26414895 ggtgtgtttggattgagggtttaggaggagaagggaggggagggttta-cttttcgtttttaaattacggactatatgacatgtttttctaaaatatatt 26414993  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  26414994 aagtgtgattgaagtattatatggtcgtttatcatgttaatatgttaact 26415043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 355 - 443
Target Start/End: Original strand, 9856942 - 9857030
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  9856942 aaattaaggactatataacatgtttttctaaaataaatcaagtgtgattgaagtattatatgatcgtttattatgttaatatgttaact 9857030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 294 - 443
Target Start/End: Original strand, 16938481 - 16938629
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||              || ||| ||||||||||| |||||| |||||||||||||    
T  16938481 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttg-tttttcttttttaagttacggactatataacatgtttctctaaaataaatt 16938579  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||||| |||||||||||  ||||||||||||| |||||||||    
T  16938580 aagtgtgattgaaatattatatgatcatttatcatgttaacatgttaact 16938629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 368 - 443
Target Start/End: Complemental strand, 10072816 - 10072741
Alignment:
Q  368 tataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  10072816 tataacatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaact 10072741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 296 - 430
Target Start/End: Complemental strand, 2550592 - 2550459
Alignment:
Q  296 tgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaattaa 395  Q
    |||||||||||||||||||||||||||||||||||| |||||||||             | ||| || ||||||||| ||||||||||| |||||||||     
T  2550592 tgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaagattcgg-actatataacatgtttttctataataaattac 2550494  T
Q  396 gtgtgattgaagtattatatgattgtttatcatgt 430  Q
    |||||||||||||||||||||||||||||||||||    
T  2550493 gtgtgattgaagtattatatgattgtttatcatgt 2550459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 294 - 439
Target Start/End: Original strand, 10476028 - 10476174
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaa-atgtttttctaaaataaat 392  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||             ||||||  || |||||| | |||||||||||||||||||    
T  10476028 ggtgtgtttgaattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaaattacagattatatatacatgtttttctaaaataaat 10476127  T
Q  393 taagtgtgattgaagtattatatgattgtttatcatgttaatatgtt 439  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||||    
T  10476128 taagtgtgattgaagtattatataatcgtttatcatcttaatatgtt 10476174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 355 - 443
Target Start/End: Complemental strand, 36392331 - 36392244
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||||||||||| || |||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36392331 aaattacggactatataatatatttt-ctaaaatagattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaact 36392244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 355 - 443
Target Start/End: Original strand, 37551470 - 37551557
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||||||||||||| ||||||  ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37551470 aaattatggactatataaaa-gttttttaaaaataaattatgtgtgattgaagtattatatgatcgtttatcatgttaatatgttaact 37551557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 355 - 443
Target Start/End: Original strand, 37606957 - 37607044
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| |||||||||||| ||||||| ||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||    
T  37606957 aaattaaggactatataaa-tgtttttttaaaataaattatatgtgattgaagtattatatgatcgtttatcatgttaatatgttaact 37607044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 355 - 443
Target Start/End: Original strand, 37654300 - 37654387
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||||||||||||| ||||||  ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37654300 aaattatggactatataaaa-gttttttaaaaataaattatgtgtgattgaagtattatatgatcgtttatcatgttaatatgttaact 37654387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 294 - 443
Target Start/End: Complemental strand, 28279719 - 28279570
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgttttt-ctaaaataaat 392  Q
    ||||||||||||||||| || ||  |||||||||||||||||||||||             |||||| ||| ||||||| |||||||| ||||||||||     
T  28279719 ggtgtgtttggattgagagtctataaggggaagggaggagagggttta-cttttcctttttaaattatggaatatataacatgttttttctaaaataaac 28279621  T
Q  393 taagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  28279620 taagtgtgattgaagtattatatgatcatttatcatgttaatatgttaact 28279570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 355 - 443
Target Start/End: Complemental strand, 4373748 - 4373660
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||||||||||| | ||||||  ||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  4373748 aaattacggactatataacaagttttttaaaaataaattaagtgtgattgaaatattatatgatcatttatcatgttaatatgttaact 4373660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 355 - 443
Target Start/End: Complemental strand, 8503017 - 8502929
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||| | ||||| |||||| ||||| ||||||||    
T  8503017 aaattacggactatataacatgcttttctaaaataaattaagtgtgattgaagtattatgtaattgtgtatcatattaatttgttaact 8502929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 364 - 443
Target Start/End: Original strand, 36363103 - 36363182
Alignment:
Q  364 actatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||| ||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||||    
T  36363103 actatataacatgtttttctaaaataaatcaagtgtcattgaagttttatatcattgtttatcatgctaatatgttaact 36363182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 372 - 443
Target Start/End: Original strand, 37779182 - 37779253
Alignment:
Q  372 aaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||| ||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||    
T  37779182 aaatgtttttttaaaataaattatatgtgattgaagtattatatgatcgtttatcatgttaatatgttaact 37779253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 355 - 440
Target Start/End: Original strand, 11756939 - 11757024
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgtta 440  Q
    |||||| | ||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||  ||||| ||||||||||||||    
T  11756939 aaattacgaactatataacatgtttctctaaaataaattaagtgtgattaaagtattatatgatcatttatgatgttaatatgtta 11757024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 368 - 443
Target Start/End: Complemental strand, 17024393 - 17024318
Alignment:
Q  368 tataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||| ||||||||||||||||||||||||  ||||||||||||||||||| |||| ||||||||||||| |||||    
T  17024393 tataacatgtttttctaaaataaattaagtacgattgaagtattatatgatcgtttttcatgttaatatgataact 17024318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 356 - 441
Target Start/End: Original strand, 42681516 - 42681601
Alignment:
Q  356 aattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    ||||| ||||||||||| ||||||||||||||||| || ||||||||| ||||||||||||||  |||||||||||| ||| ||||    
T  42681516 aattacggactatataacatgtttttctaaaataattttagtgtgattaaagtattatatgatcatttatcatgttattattttaa 42681601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 366 - 433
Target Start/End: Complemental strand, 9798783 - 9798716
Alignment:
Q  366 tatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaa 433  Q
    ||||||| |||||||||| ||||||||||| |||||||||||||||||||||| |||| |||||||||    
T  9798783 tatataacatgtttttcttaaataaattaattgtgattgaagtattatatgatcgtttttcatgttaa 9798716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 366 - 436
Target Start/End: Original strand, 14681542 - 14681612
Alignment:
Q  366 tatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatat 436  Q
    ||||||| |||||||| ||||||||||||| ||||||||||| | ||||||| ||||||||||||||||||    
T  14681542 tatataacatgtttttttaaaataaattaaatgtgattgaaggaatatatgactgtttatcatgttaatat 14681612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 292 - 419
Target Start/End: Original strand, 22022847 - 22022976
Alignment:
Q  292 aaggtgtgtttggattgagggtttaggaggggaagggaggagagggttta--annnnnnnnnnnnaaattagggactatataaaatgtttttctaaaata 389  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||               |||||| ||||||||||| || |||||||||||||    
T  22022847 aaggtgtgtttggattgagggtttaggaggggaatggaggagaggatttagttttttttttttttaaattacggactatataacatatttttctaaaata 22022946  T
Q  390 aattaagtgtgattgaagtattatatgatt 419  Q
    |||||||||||||||||  |||||| ||||    
T  22022947 aattaagtgtgattgaaagattataggatt 22022976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 375 - 443
Target Start/End: Complemental strand, 20513611 - 20513539
Alignment:
Q  375 tgtttttctaaaataaattaagtgtgattgaagtatt----atatgattgtttatcatgttaatatgttaact 443  Q
    ||||||| |||||||||||||||||||||||||||||    ||||||| |||||||||| |||||||||||||    
T  20513611 tgtttttataaaataaattaagtgtgattgaagtattatatatatgatcgtttatcatgataatatgttaact 20513539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 340
Target Start/End: Complemental strand, 14245288 - 14245242
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttt 340  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  14245288 ggtgtgtttggattgagggtttaggaggggaagggaggggagggttt 14245242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 377 - 443
Target Start/End: Complemental strand, 16501950 - 16501884
Alignment:
Q  377 tttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||||||||| |||||||||| |||| |||||||||  ||||| |||||||||||||||||    
T  16501950 tttttctaaaataaatcaagtgtgattaaagttttatatgatcatttattatgttaatatgttaact 16501884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 341
Target Start/End: Complemental strand, 1658057 - 1658008
Alignment:
Q  292 aaggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  1658057 aaggtgtgtttggatggagggtttaggaggggaagggaggggagggttta 1658008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 390 - 443
Target Start/End: Complemental strand, 20147013 - 20146960
Alignment:
Q  390 aattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  20147013 aattaagtgtgattgaaatattatatgatcgcttatcatgttaatatgttaact 20146960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 430
Target Start/End: Original strand, 40815299 - 40815433
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    |||||||||||||||| | ||||||||||||||||| |||||| ||||             ||||||  |||||||||| |||||||| |||||||||      
T  40815299 ggtgtgtttggattgaagatttaggaggggaagggaagagaggattta-cttttcttttttaaattacagactatataacatgtttttataaaataaaa- 40815396  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgt 430  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  40815397 aagtgtgattgaaatattatataattgtttatcatgt 40815433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 410
Target Start/End: Original strand, 10650491 - 10650546
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtat 410  Q
    |||||| ||||  ||| |||||||||||||||||||||||||||||||||||||||    
T  10650491 aaattacggacactatgaaatgtttttctaaaataaattaagtgtgattgaagtat 10650546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 337
Target Start/End: Complemental strand, 13634953 - 13634910
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagaggg 337  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  13634953 ggtgtgtttggattgagggtttaggaggggaagggaggggaggg 13634910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 439
Target Start/End: Complemental strand, 29002359 - 29002304
Alignment:
Q  384 aaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgtt 439  Q
    |||||||||||| | |||||| ||||||||||||| ||||||||||||||||||||    
T  29002359 aaaataaattaaatatgattgtagtattatatgatcgtttatcatgttaatatgtt 29002304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 366 - 428
Target Start/End: Complemental strand, 33424973 - 33424911
Alignment:
Q  366 tatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcat 428  Q
    |||||||||||||||| ||||||||||||| | ||||| ||||||||||||||  ||||||||    
T  33424973 tatataaaatgtttttataaaataaattaaatctgattaaagtattatatgatcatttatcat 33424911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 20147112 - 20147075
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    ||||||||||||||||||||||||||||||||||||||    
T  20147112 ggtgtgtttggattgagggtttaggaggggaagggagg 20147075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 292 - 340
Target Start/End: Complemental strand, 7544380 - 7544332
Alignment:
Q  292 aaggtgtgtttggattgagggtttaggaggggaagggaggagagggttt 340  Q
    ||||||||||||||| |||||||||||||||||||| ||| ||||||||    
T  7544380 aaggtgtgtttggatggagggtttaggaggggaaggaaggggagggttt 7544332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 329
Target Start/End: Complemental strand, 5688632 - 5688597
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaaggga 329  Q
    ||||||||||||||||||||||||||||||||||||    
T  5688632 ggtgtgtttggattgagggtttaggaggggaaggga 5688597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 10204578 - 10204621
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagaggg 337  Q
    ||||||||||||| |||||||||||||||||||||||| |||||    
T  10204578 ggtgtgtttggatcgagggtttaggaggggaagggaggtgaggg 10204621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 341
Target Start/End: Complemental strand, 10476270 - 10476223
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||||||| |||||||||||||||||||||||| ||| |||||    
T  10476270 ggtgtgtttggatggagggtttaggaggggaagggaggggagtgttta 10476223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 331
Target Start/End: Original strand, 34980810 - 34980849
Alignment:
Q  292 aaggtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  34980810 aaggtgtgtttggattgaaggtttaggaggggaagggagg 34980849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 341
Target Start/End: Complemental strand, 11757144 - 11757098
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    |||||||||||| ||||||||| |||||||||||||| |||||||||    
T  11757144 gtgtgtttggatggagggtttaagaggggaagggaggggagggttta 11757098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 335
Target Start/End: Complemental strand, 36363271 - 36363233
Alignment:
Q  297 gtgtttggattgagggtttaggaggggaagggaggagag 335  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  36363271 gtgtttggatggagggtttaggaggggaagggaggagag 36363233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 297 - 330
Target Start/End: Original strand, 11436944 - 11436977
Alignment:
Q  297 gtgtttggattgagggtttaggaggggaagggag 330  Q
    ||||||||||||||||||||||||||||||||||    
T  11436944 gtgtttggattgagggtttaggaggggaagggag 11436977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 327
Target Start/End: Complemental strand, 15986866 - 15986833
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagg 327  Q
    ||||||||||||||||||||||||||||||||||    
T  15986866 ggtgtgtttggattgagggtttaggaggggaagg 15986833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 34980887 - 34980948
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||| ||||| |||||||||||||||||  |||||||||||||| ||  |||||||||||    
T  34980887 taaaatatttttttaaaataaattaagtgtttttgaagtattatataatcatttatcatgtt 34980948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 355 - 428
Target Start/End: Complemental strand, 39966134 - 39966061
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcat 428  Q
    |||||| ||| ||||||| || ||||| | |||||||||||  ||||||||| |||||||||||||||| ||||    
T  39966134 aaattacggattatataacatattttttttaaataaattaaacgtgattgaattattatatgattgtttttcat 39966061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 40305672 - 40305709
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  40305672 ggtgtgtttggatggagggtttaggaggggaagggagg 40305709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 40305907 - 40305870
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    |||||||||||||||||||||||||||| |||||||||    
T  40305907 ggtgtgtttggattgagggtttaggaggagaagggagg 40305870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 341
Target Start/End: Original strand, 42681448 - 42681497
Alignment:
Q  292 aaggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||||||||||||||||||| |||||||| ||||| |||| ||||    
T  42681448 aaggtgtgtttggattgagggtttaagaggggaaaggaggggaggattta 42681497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 10204653 - 10204701
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgat 418  Q
    |||||||| ||| |||||||||||||||||  |||||||||||||||||    
T  10204653 taaaatgtctttttaaaataaattaagtgtttttgaagtattatatgat 10204701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 327
Target Start/End: Original strand, 14681473 - 14681505
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagg 327  Q
    |||||||||||||||||||||||||||||||||    
T  14681473 gtgtgtttggattgagggtttaggaggggaagg 14681505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 331
Target Start/End: Complemental strand, 21581188 - 21581152
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    |||||||||||| ||||||||||||||||||||||||    
T  21581188 gtgtgtttggatggagggtttaggaggggaagggagg 21581152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 33744359 - 33744299
Alignment:
Q  371 aaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    ||||||||||| |||||||||||||||||  |||||| | ||||||||  |||||||||||    
T  33744359 aaaatgtttttttaaaataaattaagtgtttttgaagaaatatatgatcatttatcatgtt 33744299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 331
Target Start/End: Complemental strand, 8551662 - 8551623
Alignment:
Q  292 aaggtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    |||||||||||||||||| |||||||||||||||| ||||    
T  8551662 aaggtgtgtttggattgaaggtttaggaggggaagagagg 8551623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 431
Target Start/End: Complemental strand, 14684654 - 14684588
Alignment:
Q  367 atataaaatgtttttcta--aaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    ||||||||||||||| |   |||||||||||||||||||||| ||||||||  || |||||||||||    
T  14684654 atataaaatgttttttttttaaataaattaagtgtgattgaaatattatatacttatttatcatgtt 14684588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 341
Target Start/End: Complemental strand, 16938721 - 16938674
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||||||| ||||||||||||| |||| ||||| |||||||||    
T  16938721 ggtgtgtttggatggagggtttaggagaggaatggaggggagggttta 16938674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 324
Target Start/End: Original strand, 9856892 - 9856922
Alignment:
Q  294 ggtgtgtttggattgagggtttaggagggga 324  Q
    |||||||||||||||||||||||||||||||    
T  9856892 ggtgtgtttggattgagggtttaggagggga 9856922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 431
Target Start/End: Original strand, 13298335 - 13298402
Alignment:
Q  362 ggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||| |||||||| ||||||  || ||||||||||||||||| ||||||  ||||||| |||||||||||    
T  13298335 ggacaatataaaacgtttttgcaatataaattaagtgtgatttaagtat--tatgattatttatcatgtt 13298402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 336
Target Start/End: Original strand, 15986626 - 15986668
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagg 336  Q
    ||||||||||||  |||||||||||||||||||||||| ||||    
T  15986626 ggtgtgtttggaaagagggtttaggaggggaagggaggggagg 15986668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 331
Target Start/End: Complemental strand, 16502035 - 16501997
Alignment:
Q  293 aggtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    |||||||||||||||||||||||||||||| ||| ||||    
T  16502035 aggtgtgtttggattgagggtttaggagggaaagagagg 16501997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 409 - 443
Target Start/End: Original strand, 22023483 - 22023517
Alignment:
Q  409 attatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||| ||||||||||||||||||||||||    
T  22023483 attatatgatcgtttatcatgttaatatgttaact 22023517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 415
Target Start/End: Original strand, 5688490 - 5688535
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatat 415  Q
    |||||||||||| ||||||| |||||||||  ||||||||||||||    
T  5688490 taaaatgtttttttaaaatagattaagtgtttttgaagtattatat 5688535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 10043329 - 10043390
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||| || || ||||| |||||||||||  |||||||||||||||||| ||||| |||||    
T  10043329 taaaatattgttttaaaagaaattaagtgtttttgaagtattatatgattatttataatgtt 10043390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 21581024 - 21581085
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||| ||||| |||||||||||||||||  ||||||||| ||||||   |||||||||||    
T  21581024 taaaatatttttttaaaataaattaagtgtttttgaagtatcatatgaacatttatcatgtt 21581085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 342
Target Start/End: Original strand, 36363037 - 36363082
Alignment:
Q  297 gtgtttggattgagggtttaggaggggaagggaggagagggtttaa 342  Q
    ||||||||||||||||||||| ||||||| ||||| ||| ||||||    
T  36363037 gtgtttggattgagggtttagaaggggaatggaggggagagtttaa 36363082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 330
Target Start/End: Complemental strand, 36392388 - 36392355
Alignment:
Q  297 gtgtttggattgagggtttaggaggggaagggag 330  Q
    |||||||||||||||||||||||||||||| |||    
T  36392388 gtgtttggattgagggtttaggaggggaagagag 36392355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 431
Target Start/End: Original strand, 1977622 - 1977670
Alignment:
Q  383 taaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||| ||||| || ||||||||||||||||||||  |||||||||||    
T  1977622 taaaatcaattaggtttgattgaagtattatatgatcctttatcatgtt 1977670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 334
Target Start/End: Complemental strand, 10650656 - 10650616
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggaga 334  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  10650656 ggtgtgtttggattgaaagtttgggaggggaagggaggaga 10650616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 12035938 - 12035974
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggag 330  Q
    ||||||||||||| || ||||||||||||||||||||    
T  12035938 ggtgtgtttggatagatggtttaggaggggaagggag 12035974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 15986791 - 15986743
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgat 418  Q
    |||||||| ||| |||||||||||||||||  || ||||||||||||||    
T  15986791 taaaatgtctttttaaaataaattaagtgtttttaaagtattatatgat 15986743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 418
Target Start/End: Original strand, 27110101 - 27110153
Alignment:
Q  366 tatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgat 418  Q
    |||||||||| | ||| | ||||||||||||||||||| || |||||||||||    
T  27110101 tatataaaatatattttttaaataaattaagtgtgattaaaatattatatgat 27110153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 1e-38; HSPs: 72)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 294 - 443
Target Start/End: Complemental strand, 36347783 - 36347635
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    |||||||||||||||||||||||||||||||||||| | ||| |||||             |||||| ||||||||||| ||||||||||||||||||||    
T  36347783 ggtgtgtttggattgagggtttaggaggggaagggaagggagagttta-cttttcttttttaaattacggactatataacatgtttttctaaaataaatt 36347685  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36347684 aagtgtgattgaagtattatataattgtttatcatgttaatatgttaact 36347635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 355 - 441
Target Start/End: Original strand, 2241472 - 2241558
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    |||||| ||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2241472 aaattacggactatataatacgtttttctaaaataaattaagtgtaattgaagtattatatgattgtttatcatgttaatatgttaa 2241558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 355 - 443
Target Start/End: Complemental strand, 39732910 - 39732823
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| |||||||||| | ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  39732910 aaattacggactatataca-tgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaact 39732823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 294 - 440
Target Start/End: Complemental strand, 15224936 - 15224791
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    |||||||||||||  ||||||||||||||||||||||| || ||||||             |||||| || |||||||| ||||||||||| ||||||||    
T  15224936 ggtgtgtttggatcaagggtttaggaggggaagggaggggatggttta-cttttcttttttaaattacgggctatataacatgtttttctagaataaatt 15224838  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatatgtta 440  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||    
T  15224837 aagtgtgattgaagtattatatgatcatttatcatgttaatatgtta 15224791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 366 - 443
Target Start/End: Original strand, 16565850 - 16565927
Alignment:
Q  366 tatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||    
T  16565850 tatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatatttatatgttaact 16565927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 362 - 443
Target Start/End: Original strand, 23748164 - 23748245
Alignment:
Q  362 ggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||| ||||||||| ||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||    
T  23748164 ggactatataacatgtttttcaaaaataaatcaagtgtgattgaagtattatattatcgtttatcatgttaatatgttaact 23748245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 355 - 443
Target Start/End: Complemental strand, 19567003 - 19566915
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||  ||||||||| |||||||| |||||    
T  19567003 aaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatacgaccgtttatcattttaatatgctaact 19566915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 295 - 443
Target Start/End: Complemental strand, 36567093 - 36566945
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatta 394  Q
    |||||||||||||||||||||||||||||||  ||||||| | ||||             |||||| | | ||||||| ||||||||||| |||||||||    
T  36567093 gtgtgtttggattgagggtttaggaggggaatagaggagatgatttactttttcgtttttaaattatgaattatataacatgtttttctataataaatta 36566994  T
Q  395 agtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    | ||||||||||||||||||||||  |||||||||||||||||||||||    
T  36566993 attgtgattgaagtattatatgatcatttatcatgttaatatgttaact 36566945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 377 - 443
Target Start/End: Complemental strand, 37740051 - 37739985
Alignment:
Q  377 tttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  37740051 tttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatcttaact 37739985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 355 - 443
Target Start/End: Original strand, 12541827 - 12541916
Alignment:
Q  355 aaattagggactatataaaatgtttt-tctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| |||||||||||||| |||| |||||||||||||||||| |||||||||| |||||||| ||||||||||||||| ||||||||    
T  12541827 aaattacggactatataaaatattttttctaaaataaattaagtgcgattgaagtactatatgatcgtttatcatgttaatgtgttaact 12541916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 378 - 443
Target Start/End: Original strand, 17379897 - 17379962
Alignment:
Q  378 ttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  17379897 ttttctaaaataaattaagtgtgattggagtattatatgattgtttatcatgttaatatgctaact 17379962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 355 - 424
Target Start/End: Original strand, 40022432 - 40022501
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgttta 424  Q
    |||||| | ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40022432 aaattatgaactatataacatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgttta 40022501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 294 - 443
Target Start/End: Original strand, 9426987 - 9427135
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||| |            ||||||   ||||||||| ||||||||| ||| ||||||    
T  9426987 ggtgtgtttggattgaaagtttaggaggggaagggaggagagggtttgattttctttttt-aaattaccaactatataacatgtttttcaaaactaaatt 9427085  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    | | ||||||||||||||||||| |||||||||||| ||||||| |||||    
T  9427086 atgcgtgattgaagtattatatgtttgtttatcatgctaatatgctaact 9427135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 355 - 443
Target Start/End: Original strand, 39821731 - 39821819
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||| | ||||| ||||||||||||||||||||||||| |||| |||||||||| |||  |||||||||||||||||||||||    
T  39821731 aaattatggattctataacatgtttttctaaaataaattaagtgcgatttaagtattataagatcatttatcatgttaatatgttaact 39821819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 294 - 418
Target Start/End: Original strand, 41778775 - 41778898
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    |||||||||||||||||||||||| |||| |||||||| |||||||||             |||||| ||||  |||||||||||||| |||||||||||    
T  41778775 ggtgtgtttggattgagggtttagaagggaaagggaggggagggttta-cttttgtactttaaattatggacagtataaaatgtttttttaaaataaatt 41778873  T
Q  394 aagtgtgattgaagtattatatgat 418  Q
    |||||||||||||||||||||||||    
T  41778874 aagtgtgattgaagtattatatgat 41778898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 294 - 418
Target Start/End: Original strand, 35736177 - 35736300
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||            |||| | |||||| |||| |||||||||||||||||||     
T  35736177 ggtgtgtttggattgagggtttaggaggggaagggaggggaggggttaa-ttttcttttttaaatcacggactagataacatgtttttctaaaataaatg 35736275  T
Q  394 aagtgtgattgaagtattatatgat 418  Q
    |||||||| ||||||||||||||||    
T  35736276 aagtgtgactgaagtattatatgat 35736300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 367 - 433
Target Start/End: Complemental strand, 8427041 - 8426975
Alignment:
Q  367 atataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaa 433  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  8427041 atataacatgtttttctaaaataaattaagtgcgattgaagtattatatgatcatttatcatgttaa 8426975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 369 - 431
Target Start/End: Complemental strand, 31795937 - 31795875
Alignment:
Q  369 ataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  31795937 ataacatgtttttttaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgtt 31795875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 389 - 443
Target Start/End: Original strand, 34209560 - 34209614
Alignment:
Q  389 aaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34209560 aaattaagtgtgattgaagtgttatatgattgtttatcatgttaatatgttaact 34209614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 368 - 432
Target Start/End: Original strand, 18811404 - 18811467
Alignment:
Q  368 tataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtta 432  Q
    |||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18811404 tataaagtgttttt-taaaataaattaagtgtgattgaaatattatatgattgtttatcatgtta 18811467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 363 - 443
Target Start/End: Complemental strand, 28262617 - 28262537
Alignment:
Q  363 gactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||| |||||||||||||||||||||  |||||||||| ||||| ||||| ||||||||||||| ||| ||||||    
T  28262617 gactatataacatgtttttctaaaataaattacatgtgattgaaatattacatgatcgtttatcatgttattatattaact 28262537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 366 - 443
Target Start/End: Complemental strand, 29525904 - 29525825
Alignment:
Q  366 tatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgat--tgtttatcatgttaatatgttaact 443  Q
    ||||||| |||||||| ||||||||||||| ||||||||||||||||||| ||  | |||||||||||||||||||||||    
T  29525904 tatataatatgtttttttaaaataaattaaatgtgattgaagtattatataatactttttatcatgttaatatgttaact 29525825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 364 - 431
Target Start/End: Complemental strand, 3094526 - 3094459
Alignment:
Q  364 actatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    ||||| ||||||||||||||||||||||||  ||||  |||||||||||||||||| |||||||||||    
T  3094526 actatgtaaaatgtttttctaaaataaatttcgtgtttttgaagtattatatgattatttatcatgtt 3094459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 392 - 443
Target Start/End: Complemental strand, 42316909 - 42316858
Alignment:
Q  392 ttaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  42316909 ttaagtgtgattgaagtattatatgatcgtttatcatgttaatacgttaact 42316858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 443
Target Start/End: Original strand, 9631652 - 9631710
Alignment:
Q  385 aaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||| |||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  9631652 aaataaatcaagtgtgaatgaagtattatattatcgtttatcatgttaatatgttaact 9631710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 340
Target Start/End: Original strand, 17379848 - 17379894
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttt 340  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  17379848 ggtgtgtttggattgagggtttaggaggggaagggaggggagggttt 17379894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 428
Target Start/End: Original strand, 886990 - 887051
Alignment:
Q  367 atataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcat 428  Q
    |||||||||| |||| |||||||||||| |||||||||||||||||||||||  ||||||||    
T  886990 atataaaatgcttttttaaaataaattatgtgtgattgaagtattatatgatcatttatcat 887051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 443
Target Start/End: Original strand, 32503232 - 32503309
Alignment:
Q  366 tatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||| || ||||||||||||||||||||| ||||| || |||||||||||| |||||||| || |||| ||||||    
T  32503232 tatataacatatttttctaaaataaattaagtatgattaaaatattatatgattatttatcatctttatatattaact 32503309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 42296545 - 42296500
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtt 339  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  42296545 ggtgtgtttggattgagggattaggaggggaagggaggagagggtt 42296500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 374 - 442
Target Start/End: Complemental strand, 6721785 - 6721717
Alignment:
Q  374 atgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaac 442  Q
    ||||||||||||||||||| ||||||||||||| |||||||| ||  ||||||||||||| || |||||    
T  6721785 atgtttttctaaaataaatcaagtgtgattgaaatattatattatcatttatcatgttaagatattaac 6721717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 377 - 425
Target Start/End: Original strand, 12751899 - 12751947
Alignment:
Q  377 tttttctaaaataaattaagtgtgattgaagtattatatgattgtttat 425  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  12751899 tttttctaaaataatttaagtgtgattgaagtattatatgatcgtttat 12751947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 443
Target Start/End: Complemental strand, 36046444 - 36046298
Alignment:
Q  293 aggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaat 392  Q
    |||||||||||||||||||||||| |||||||||||||| |||| ||  |            |||||| |||| |||||| ||| |||| ||||||||||    
T  36046444 aggtgtgtttggattgagggtttatgaggggaagggaggggaggttt--acttttgttttttaaattacggacgatataacatgcttttataaaataaat 36046347  T
Q  393 taagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    | ||||  ||||||||||||| ||||  |||| ||||||||||||||||||    
T  36046346 tgagtg--attgaagtattatgtgatcatttaacatgttaatatgttaact 36046298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 423
Target Start/End: Original strand, 7681311 - 7681378
Alignment:
Q  356 aattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgttt 423  Q
    ||||| ||| ||||||| |  ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  7681311 aattacggattatataatagttttttgtaaaataaattaagtgtgattgaagtattatatgatcgttt 7681378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 427
Target Start/End: Original strand, 41841753 - 41841816
Alignment:
Q  364 actatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatca 427  Q
    ||||||||| || |||| ||||||||||||||| ||||||| |||||||||||||| |||||||    
T  41841753 actatataacatattttcctaaaataaattaagggtgattggagtattatatgattttttatca 41841816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 432
Target Start/End: Original strand, 20545799 - 20545848
Alignment:
Q  383 taaaataaattaagtgtgattgaagtattatatgattgtttatcatgtta 432  Q
    ||||||||||||| ||||||||||||||||||||||| ||| ||||||||    
T  20545799 taaaataaattaaatgtgattgaagtattatatgattatttctcatgtta 20545848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 22356246 - 22356201
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtt 339  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||    
T  22356246 ggtgtgtttggattgaggatttaggaggggaagggaggggagggtt 22356201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 23748337 - 23748292
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtt 339  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||    
T  23748337 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtt 23748292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 45098246 - 45098307
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||||| ||| |||||||||||||||||  |||||||||||||||||  |||||||||||    
T  45098246 taaaatgtatttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 45098307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 366 - 441
Target Start/End: Complemental strand, 39354345 - 39354270
Alignment:
Q  366 tatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    ||||||| |||||| ||||||||||| | |||||||||||||||||| ||||| | |||| |||||| ||| ||||    
T  39354345 tatataacatgtttatctaaaataaagttagtgtgattgaagtattacatgatcgattattatgttattattttaa 39354270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 340
Target Start/End: Complemental strand, 17380083 - 17380037
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttt 340  Q
    ||||||||||||||||||||||||||||||||| |||| || |||||    
T  17380083 ggtgtgtttggattgagggtttaggaggggaagtgaggggatggttt 17380037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 45257384 - 45257442
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcat 428  Q
    |||||||||||  |||||||||||||||||  |||||||||||||||||  ||||||||    
T  45257384 taaaatgttttcttaaaataaattaagtgtttttgaagtattatatgatcatttatcat 45257442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 370 - 415
Target Start/End: Complemental strand, 2381154 - 2381109
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatat 415  Q
    |||||||||||| |||||||||||||||||  ||||||||||||||    
T  2381154 taaaatgtttttttaaaataaattaagtgtttttgaagtattatat 2381109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 341
Target Start/End: Complemental strand, 8427115 - 8427066
Alignment:
Q  292 aaggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    |||| |||||||||||||||||||||||||| |||||||| ||| |||||    
T  8427115 aaggcgtgtttggattgagggtttaggagggaaagggaggggagagttta 8427066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 9631802 - 9631757
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtt 339  Q
    ||||||||||||| ||||||||||||||| ||||||| ||||||||    
T  9631802 ggtgtgtttggatggagggtttaggagggaaagggagaagagggtt 9631757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 31061436 - 31061497
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||||| ||| |||||||||||||||||  ||||| |||||||||||  |||||||||||    
T  31061436 taaaatgtgtttttaaaataaattaagtgtttttgaaatattatatgatcatttatcatgtt 31061497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 431
Target Start/End: Original strand, 887210 - 887254
Alignment:
Q  387 ataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||| | ||||||||||||||||||||||| ||||||||||||    
T  887210 ataaatcatgtgtgattgaagtattatatgatcgtttatcatgtt 887254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 21662375 - 21662328
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgat 418  Q
    |||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  21662375 taaaatgttttt-taaaatcaattaagtttgattgaagtattatatgat 21662328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 340
Target Start/End: Original strand, 41841682 - 41841730
Alignment:
Q  292 aaggtgtgtttggattgagggtttaggaggggaagggaggagagggttt 340  Q
    |||||||||||||||||||| |||||||||| |||||| | ||||||||    
T  41841682 aaggtgtgtttggattgaggatttaggagggaaagggatgggagggttt 41841730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 330
Target Start/End: Original strand, 12541773 - 12541808
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggag 330  Q
    |||||||||||||||||||||||||||||| |||||    
T  12541773 gtgtgtttggattgagggtttaggaggggaggggag 12541808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 419
Target Start/End: Complemental strand, 21745295 - 21745248
Alignment:
Q  372 aaatgtttttctaaaataaattaagtgtgattgaagtattatatgatt 419  Q
    |||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  21745295 aaatatttttctaaaatcaattaagtgtggttgaactattatatgatt 21745248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 443
Target Start/End: Original strand, 27926668 - 27926703
Alignment:
Q  408 tattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||| ||||||||||||||||||||||||    
T  27926668 tattatatgatcgtttatcatgttaatatgttaact 27926703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 31061598 - 31061555
Alignment:
Q  298 tgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    |||||||||||||||||||||||||||| ||||| |||| ||||    
T  31061598 tgtttggattgagggtttaggaggggaatggaggggaggattta 31061555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 432
Target Start/End: Complemental strand, 31928196 - 31928149
Alignment:
Q  385 aaataaattaagtgtgattgaagtattatatgattgtttatcatgtta 432  Q
    |||||||||||||||  |||||||||||||||||  ||||||||||||    
T  31928196 aaataaattaagtgtttttgaagtattatatgatcatttatcatgtta 31928149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 331
Target Start/End: Original strand, 33265615 - 33265646
Alignment:
Q  300 tttggattgagggtttaggaggggaagggagg 331  Q
    ||||||||||||||||||||||||||||||||    
T  33265615 tttggattgagggtttaggaggggaagggagg 33265646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 432
Target Start/End: Original strand, 35325353 - 35325408
Alignment:
Q  377 tttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtta 432  Q
    ||||| ||||||||||||||| |  |||||||||||||||||  ||||||||||||    
T  35325353 tttttttaaaataaattaagtatttttgaagtattatatgatcatttatcatgtta 35325408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 337
Target Start/End: Complemental strand, 35736429 - 35736386
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagaggg 337  Q
    ||||||||||||| |||||||||||||| ||||||||| |||||    
T  35736429 ggtgtgtttggatggagggtttaggaggtgaagggaggggaggg 35736386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 341
Target Start/End: Complemental strand, 45257549 - 45257502
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||||||| |||| ||||||| |||||||||||||| ||||||    
T  45257549 ggtgtgtttggatggaggttttaggatgggaagggaggagatggttta 45257502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 33265691 - 33265741
Alignment:
Q  378 ttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcat 428  Q
    |||| |||||||||||||||||  |||||||||||||||||  ||||||||    
T  33265691 ttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcat 33265741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 328
Target Start/End: Original strand, 40022365 - 40022399
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaaggg 328  Q
    ||||||||||||||||||||||||||||| |||||    
T  40022365 ggtgtgtttggattgagggtttaggagggtaaggg 40022399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 425
Target Start/End: Complemental strand, 42537912 - 42537859
Alignment:
Q  371 aaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttat 425  Q
    ||||||||||| || ||| ||||||||||||||||| |||||||||||| |||||    
T  42537912 aaaatgttttt-tataatcaattaagtgtgattgaaatattatatgattatttat 42537859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 341
Target Start/End: Original strand, 2241411 - 2241459
Alignment:
Q  292 aaggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||||| ||||||||||| |||||||||||||||| ||| |||||    
T  2241411 aaggtgtgtttagattgagggtt-aggaggggaagggaggggagagttta 2241459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 3094595 - 3094558
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    |||||||||||||||||||||||||| || ||||||||    
T  3094595 ggtgtgtttggattgagggtttaggaaggaaagggagg 3094558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 329
Target Start/End: Original strand, 16713492 - 16713529
Alignment:
Q  292 aaggtgtgtttggattgagggtttaggaggggaaggga 329  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  16713492 aaggtgtgttttgattgagggtttaagaggggaaggga 16713529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 335
Target Start/End: Complemental strand, 16713767 - 16713726
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagag 335  Q
    ||||||||||||| ||||||||||||  ||||||||||||||    
T  16713767 ggtgtgtttggatggagggtttaggaaaggaagggaggagag 16713726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 415
Target Start/End: Complemental strand, 17333978 - 17333933
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatat 415  Q
    |||||||| ||| |||||||||||||||||  ||||||||||||||    
T  17333978 taaaatgtctttttaaaataaattaagtgtttttgaagtattatat 17333933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 415
Target Start/End: Original strand, 22356042 - 22356087
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatat 415  Q
    |||||||||||| ||||||| |||||||||  ||||||||||||||    
T  22356042 taaaatgtttttttaaaatagattaagtgtttttgaagtattatat 22356087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 331
Target Start/End: Complemental strand, 31796002 - 31795969
Alignment:
Q  298 tgtttggattgagggtttaggaggggaagggagg 331  Q
    |||||||||||| |||||||||||||||||||||    
T  31796002 tgtttggattgaaggtttaggaggggaagggagg 31795969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 341
Target Start/End: Complemental strand, 35531900 - 35531851
Alignment:
Q  292 aaggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    |||||||||||||||  ||| |||||||||||| |||||| |||||||||    
T  35531900 aaggtgtgtttggatgaaggttttaggaggggaggggaggggagggttta 35531851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 36347543 - 36347584
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagag 335  Q
    |||||||||||||  ||||||||||||||||||||| |||||    
T  36347543 ggtgtgtttggatgaagggtttaggaggggaagggaagagag 36347584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 328
Target Start/End: Original strand, 2380996 - 2381028
Alignment:
Q  296 tgtgtttggattgagggtttaggaggggaaggg 328  Q
    ||||||||||| |||||||||||||||||||||    
T  2380996 tgtgtttggatagagggtttaggaggggaaggg 2381028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 325
Target Start/End: Original strand, 7681259 - 7681291
Alignment:
Q  293 aggtgtgtttggattgagggtttaggaggggaa 325  Q
    ||||||||||||||| |||||||||||||||||    
T  7681259 aggtgtgtttggatttagggtttaggaggggaa 7681291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Complemental strand, 9592017 - 9591973
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgt 399  Q
    |||||| | ||||||||| |||||||||||||||| |||||||||    
T  9592017 aaattacgcactatataacatgtttttctaaaatatattaagtgt 9591973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 4e-36; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 294 - 443
Target Start/End: Original strand, 30010334 - 30010482
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||             |||||| ||||||||||| ||||||||||||||||||||    
T  30010334 ggtgtgtttggattgagggtttaggaggggaagggaggggaggattta-cttttcttgtttaaattacggactatataacatgtttttctaaaataaatt 30010432  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||| ||||||||||||||||| |||||| |||||||||||||||||    
T  30010433 aagtgtggttgaagtattatatgatcgtttataatgttaatatgttaact 30010482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 294 - 443
Target Start/End: Complemental strand, 32951560 - 32951412
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    ||||||||||||||||| ||||||||| |||||||||| ||| |||||             |||||| |||||||| || ||||||||||||||||||||    
T  32951560 ggtgtgtttggattgagagtttaggagaggaagggaggggagagttta-cttttcgtttttaaattacggactatagaacatgtttttctaaaataaatt 32951462  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  32951461 aagtgtgattgaagtattatacgatcgtttatcatgttaatatgttaact 32951412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 294 - 443
Target Start/End: Complemental strand, 35349704 - 35349556
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    |||||||||||||| |||||||| |||||||||||||| |||||||||             |||||| ||||||||||| || ||||||||||||||| |    
T  35349704 ggtgtgtttggattaagggtttatgaggggaagggaggggagggttta-cttttcgtttttaaattacggactatataacatttttttctaaaataaact 35349606  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||| || |||||||||||||||||||||||||||||||||||||||||||    
T  35349605 aagggttattgaagtattatatgattgtttatcatgttaatatgttaact 35349556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 362 - 443
Target Start/End: Original strand, 51597737 - 51597818
Alignment:
Q  362 ggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  51597737 ggactatataacatgtttttttaaaataaattaagtgtgattgaagtattatatgattgtttatcatcttaatatgttaact 51597818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 299 - 443
Target Start/End: Complemental strand, 2859169 - 2859026
Alignment:
Q  299 gtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaattaagtg 398  Q
    ||||||||||| ||||||||||||||||||||| |||||||||             |||||| ||||||||||| ||||||||| |||||||||||||||    
T  2859169 gtttggattgaaggtttaggaggggaagggaggggagggttta-cttttattttttaaattacggactatataacatgtttttcaaaaataaattaagtg 2859071  T
Q  399 tgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||||||||||||||||||| |||| | ||||||||||    
T  2859070 tgattgaagtattatatgattgtttataatgtaagtatgttaact 2859026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 355 - 443
Target Start/End: Complemental strand, 50744463 - 50744375
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||||||||||| | |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  50744463 aaattacggactatataacaggtttctctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaact 50744375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 355 - 443
Target Start/End: Complemental strand, 45585867 - 45585779
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||||||||||| |||||||| |||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||    
T  45585867 aaattacggactatataacatgtttttttaaaataaattaagtgtgatcgaagtactatatgatcgtttatcatgttaatatgttaact 45585779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 295 - 441
Target Start/End: Complemental strand, 38510135 - 38509990
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatta 394  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||             ||| || ||||||||||| ||||||||||||||||||| |    
T  38510135 gtgtgtttggattaagggtttaggaggggaagggaggggagggttta-gttttcttttttaaactacggactatataacatgtttttctaaaataaatca 38510037  T
Q  395 agtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    ||||||||||||||||||||| || ||||||| |||||| |||||||    
T  38510036 agtgtgattgaagtattatattatcgtttatcgtgttaagatgttaa 38509990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 363 - 443
Target Start/End: Complemental strand, 40095108 - 40095027
Alignment:
Q  363 gactatataaaatgttttt-ctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  40095108 gactatataacatgttttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatttgttaact 40095027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 294 - 443
Target Start/End: Original strand, 41498406 - 41498554
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||             |||||| | ||||| ||| ||| |||||||  |||| ||    
T  41498406 ggtgtgtttggattgagggtttaggaggggaagtgaggggagggttta-cttttcgtttttaaattatgaactatttaacatgattttctacgataagtt 41498504  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41498505 aagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaact 41498554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 355 - 443
Target Start/End: Original strand, 10391934 - 10392022
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||||||||| | |||||||||||||||||||||| ||||||| |||||||||||||  ||||||||||||||||||||||||    
T  10391934 aaattacggactatattacatgtttttctaaaataaattaattgtgattaaagtattatatgaccgtttatcatgttaatatgttaact 10392022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 363 - 443
Target Start/End: Complemental strand, 49946762 - 49946682
Alignment:
Q  363 gactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||    
T  49946762 gactatataacatgtttttttaaaataaattaaatgtgattgaagtattatatgataatttatcatgttaatatgttaact 49946682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 364 - 443
Target Start/End: Original strand, 8529870 - 8529949
Alignment:
Q  364 actatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||| |||||||| | |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  8529870 actatataacatgttttttttaaataaattaagtgtgattgaagtattatatgatcgtttaccatgttaatatgttaact 8529949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 443
Target Start/End: Original strand, 12234012 - 12234160
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    ||||||||||||||||||||||||||||||||||||||  |||| ||||            |||||| ||||||||||| |||||||||||||||||||     
T  12234012 ggtgtgtttggattgagggtttaggaggggaagggagggtagggcttaattttctttttt-aaattacggactatataacatgtttttctaaaataaatc 12234110  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||||| |||| |||||||  | ||| ||||||||||| |||||    
T  12234111 aagtgtgattgatgtataatatgatcatatattatgttaatatgctaact 12234160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 377 - 441
Target Start/End: Original strand, 41676363 - 41676427
Alignment:
Q  377 tttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  41676363 tttttctaaaataaattaagtgtgattgtagtattatatgatcgtttatcatgttaatatgttaa 41676427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 365 - 431
Target Start/End: Complemental strand, 44211077 - 44211011
Alignment:
Q  365 ctatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  44211077 ctatataacgtgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgtt 44211011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 374 - 443
Target Start/End: Complemental strand, 36285737 - 36285668
Alignment:
Q  374 atgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||| ||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36285737 atgtttttttaaaatatatcaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaact 36285668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 374 - 443
Target Start/End: Original strand, 42230619 - 42230688
Alignment:
Q  374 atgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  42230619 atgttttttaaaaataaattaagtgtgattgaagtattatatgattgtttattatgttaatattttaact 42230688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 368 - 443
Target Start/End: Complemental strand, 26941012 - 26940937
Alignment:
Q  368 tataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||  ||||||||| |||||||    
T  26941012 tataacatgtttttctaaaataaatcaagtgtgattgaagtattatatgactgtttacgatgttaataagttaact 26940937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 374 - 443
Target Start/End: Original strand, 7444576 - 7444645
Alignment:
Q  374 atgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  7444576 atgtttttctaaattaaaccaagtgtgattgaagtattatatgatcgtttattatgttaatatgttaact 7444645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 363 - 443
Target Start/End: Original strand, 6563647 - 6563726
Alignment:
Q  363 gactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||| |||| |||||||||||||||| |||| |||||| |||||||||| | |||||||||||||||| ||||||    
T  6563647 gactatataacatgtctttctaaaataaattatgtgtcattgaattattatatga-tctttatcatgttaatatattaact 6563726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 368 - 431
Target Start/End: Complemental strand, 42742478 - 42742416
Alignment:
Q  368 tataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||| | |||||||||||    
T  42742478 tataaaatgttttt-taaaataaattaagtgtgattgaagtactatatgactatttatcatgtt 42742416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 364 - 437
Target Start/End: Complemental strand, 2470908 - 2470831
Alignment:
Q  364 actatataaaatgtttttctaaaataaattaagtgtgattgaag----tattatatgattgtttatcatgttaatatg 437  Q
    ||||||||| |||||||||||||||| | ||| |||||||||||    |||||||||| |||||||||||||||||||    
T  2470908 actatataacatgtttttctaaaatacactaattgtgattgaaggaagtattatatgactgtttatcatgttaatatg 2470831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 429
Target Start/End: Complemental strand, 1085657 - 1085598
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatg 429  Q
    |||||||||||| |||||||||||||||||  |||||||||||||||||  |||||||||    
T  1085657 taaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatg 1085598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 341
Target Start/End: Complemental strand, 12234252 - 12234205
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||    
T  12234252 ggtgtgtttggatggagggtttaggaggggaagggaggggagggttta 12234205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 341
Target Start/End: Complemental strand, 20607459 - 20607412
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||    
T  20607459 ggtgtgtttggatggagggtttaggaggggaagggaggggagggttta 20607412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 26324016 - 26324059
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagaggg 337  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  26324016 ggtgtgtttggattgagggtttaggaggggaagggaggggaggg 26324059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 428
Target Start/End: Complemental strand, 50079554 - 50079493
Alignment:
Q  367 atataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcat 428  Q
    ||||||||||||||| |||||||||||||||||  || ||||||||||||||  ||||||||    
T  50079554 atataaaatgtttttttaaaataaattaagtgtttttaaagtattatatgatcatttatcat 50079493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 334
Target Start/End: Complemental strand, 1085732 - 1085692
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggaga 334  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  1085732 ggtgtgtttggatagagggtttaggaggggaagggaggaga 1085692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 443
Target Start/End: Complemental strand, 20576269 - 20576225
Alignment:
Q  399 tgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||    
T  20576269 tgattgaagtattatatgatcgtttatcatgttaatatattaact 20576225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 33643345 - 33643393
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgat 418  Q
    |||||||||||| |||||||||||||||||  |||||||||||||||||    
T  33643345 taaaatgtttttttaaaataaattaagtgtttttgaagtattatatgat 33643393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 367 - 418
Target Start/End: Original strand, 2506613 - 2506664
Alignment:
Q  367 atataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgat 418  Q
    |||||||||||||||  ||||||||||||||||  |||||||||||||||||    
T  2506613 atataaaatgttttttcaaaataaattaagtgtttttgaagtattatatgat 2506664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 341
Target Start/End: Original strand, 2858934 - 2858981
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||||||| ||||||||||||||| |||||||| |||||||||    
T  2858934 ggtgtgtttggatggagggtttaggagggaaagggaggggagggttta 2858981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 368 - 431
Target Start/End: Original strand, 27739127 - 27739189
Alignment:
Q  368 tataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||||||||||| |||||| ||||||||||||||||||||||  |||||  |||||||||||    
T  27739127 tataaaatgttttt-taaaatcaattaagtgtgattgaagtatttaatgatcatttatcatgtt 27739189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 341
Target Start/End: Complemental strand, 30010574 - 30010527
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||||||    
T  30010574 ggtgtgtttggatggagggtttagaaggggaagggaggggagggttta 30010527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 431
Target Start/End: Original strand, 35927892 - 35927951
Alignment:
Q  372 aaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||| ||||||||||||||||||||| |  |||||||||||||||||  |||||||||||    
T  35927892 aaatatttttctaaaataaattaagtatttttgaagtattatatgatcatttatcatgtt 35927951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 341
Target Start/End: Original strand, 40094935 - 40094982
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||||||| |||||||||||||||||||| ||| |||||||||    
T  40094935 ggtgtgtttggatggagggtttaggaggggaaggaaggggagggttta 40094982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 51303386 - 51303429
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagaggg 337  Q
    ||||||||||||||||||||||||||||||| |||||| |||||    
T  51303386 ggtgtgtttggattgagggtttaggaggggaggggaggggaggg 51303429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 20576136 - 20576182
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    |||||||||||| |||||||||||||||||||||||| ||| |||||    
T  20576136 gtgtgtttggatagagggtttaggaggggaagggaggggagagttta 20576182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 431
Target Start/End: Complemental strand, 51303544 - 51303490
Alignment:
Q  377 tttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    ||||| |||||||||||||||||  |||||||||||||||||  |||||||||||    
T  51303544 tttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 51303490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 20607225 - 20607262
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    |||||||||| |||||||||||||||||||||||||||    
T  20607225 ggtgtgtttgaattgagggtttaggaggggaagggagg 20607262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 370 - 427
Target Start/End: Original strand, 25268341 - 25268398
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatca 427  Q
    |||||||| ||| |||||||||||||||||  |||||||||||||||||  |||||||    
T  25268341 taaaatgtatttttaaaataaattaagtgtttttgaagtattatatgatcatttatca 25268398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 327
Target Start/End: Complemental strand, 26941075 - 26941042
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagg 327  Q
    ||||||||||||||||||||||||||||||||||    
T  26941075 ggtgtgtttggattgagggtttaggaggggaagg 26941042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 35513037 - 35512996
Alignment:
Q  296 tgtgtttggattgagggtttaggaggggaagggaggagaggg 337  Q
    ||||||||||| |||||||||||||||||||||||| |||||    
T  35513037 tgtgtttggatggagggtttaggaggggaagggaggggaggg 35512996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 38509896 - 38509941
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtt 339  Q
    ||||||||||||| |||||||||||||||||||||||  |||||||    
T  38509896 ggtgtgtttggatagagggtttaggaggggaagggagaggagggtt 38509941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 415
Target Start/End: Original strand, 49832621 - 49832669
Alignment:
Q  367 atataaaatgtttttctaaaataaattaagtgtgattgaagtattatat 415  Q
    ||||||| |||||||  |||||||| |||||||||||||||||||||||    
T  49832621 atataaagtgttttttaaaaataaaataagtgtgattgaagtattatat 49832669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 329
Target Start/End: Complemental strand, 525342 - 525307
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaaggga 329  Q
    |||||||||||||||||||||||||| |||||||||    
T  525342 ggtgtgtttggattgagggtttaggacgggaaggga 525307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 35927816 - 35927859
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagaggg 337  Q
    |||||||||||||||||| ||||||||||||| ||||| |||||    
T  35927816 ggtgtgtttggattgaggttttaggaggggaatggaggggaggg 35927859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 338
Target Start/End: Complemental strand, 40709532 - 40709489
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggaggagagggt 338  Q
    ||||||||||||||||| ||||||||||||| ||||| ||||||    
T  40709532 gtgtgtttggattgaggatttaggaggggaacggaggggagggt 40709489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 417
Target Start/End: Original strand, 49065548 - 49065579
Alignment:
Q  386 aataaattaagtgtgattgaagtattatatga 417  Q
    ||||||||||||||||||||||||||||||||    
T  49065548 aataaattaagtgtgattgaagtattatatga 49065579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 51582072 - 51582119
Alignment:
Q  384 aaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||||||| |||||||||||||||||| |||||  |||||||||||    
T  51582072 aaaataaattcagtgtgattgaagtattacatgatcatttatcatgtt 51582119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 51303744 - 51303695
Alignment:
Q  368 tataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgat 418  Q
    |||||||||||||| |||| | ||||||||||||||||| |||||||||||    
T  51303744 tataaaatgtttttttaaa-tcaattaagtgtgattgaactattatatgat 51303695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 434
Target Start/End: Original strand, 20607311 - 20607360
Alignment:
Q  385 aaataaattaagtgtgattgaagtattatatgattgtttatcatgttaat 434  Q
    |||||||||||||||  |||||||||||||||||  | ||||||||||||    
T  20607311 aaataaattaagtgtttttgaagtattatatgataatatatcatgttaat 20607360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 341
Target Start/End: Complemental strand, 49946828 - 49946783
Alignment:
Q  296 tgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||||||||||| ||||| |||||||||| | |||||||||    
T  49946828 tgtgtttggattgagggattaggcggggaagggatgtgagggttta 49946783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 326
Target Start/End: Original strand, 2470732 - 2470764
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaag 326  Q
    ||||||||||||| |||||||||||||||||||    
T  2470732 ggtgtgtttggatggagggtttaggaggggaag 2470764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 327
Target Start/End: Complemental strand, 2470966 - 2470934
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagg 327  Q
    ||||||||||||||| |||||||||||||||||    
T  2470966 gtgtgtttggattgatggtttaggaggggaagg 2470934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 33643501 - 33643469
Alignment:
Q  292 aaggtgtgtttggattgagggtttaggagggga 324  Q
    ||||||||||||||| |||||||||||||||||    
T  33643501 aaggtgtgtttggatagagggtttaggagggga 33643469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 418
Target Start/End: Complemental strand, 43553101 - 43553049
Alignment:
Q  366 tatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgat 418  Q
    |||||||  ||||| ||||||||||||||||||| | |||| |||||||||||    
T  43553101 tatataacttgtttctctaaaataaattaagtgttactgaaatattatatgat 43553049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 1e-35; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 295 - 443
Target Start/End: Complemental strand, 33655349 - 33655202
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatta 394  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||             |||||| || |||||||| |||||||||||||||||||||    
T  33655349 gtgtgtttggattgagggtttaggaggggaagagaggcgagggttta-cttttcttttttaaattatgggctatataacatgtttttctaaaataaatta 33655251  T
Q  395 agtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  33655250 agtgtgattgaagtattatatgatcatttatcatgttaatatgttaact 33655202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 294 - 443
Target Start/End: Complemental strand, 1051740 - 1051593
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||             |||||| | |||||||||  |||||||||||||||||||    
T  1051740 ggtgtgtttggattgagggtttaggaggggaagggaggagaggattta-tttttcttttttaaattacgaactatataacctgtttttctaaaataaatt 1051642  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  1051641 aagtgtgattgaagcattatatgattgtttatcatg-taatatgttaact 1051593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 362 - 443
Target Start/End: Original strand, 25887261 - 25887342
Alignment:
Q  362 ggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  25887261 ggactatataacatgtttttctaaaataaattaagtgtgattggagtattatatgattgtttatcatattaatatgttaact 25887342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 355 - 443
Target Start/End: Complemental strand, 24970347 - 24970259
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  24970347 aaattatggattatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcaagttaatatgttaact 24970259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 355 - 443
Target Start/End: Complemental strand, 40196714 - 40196626
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  40196714 aaattacggaatatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcaggttgatatgttaact 40196626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 364 - 443
Target Start/End: Complemental strand, 34228491 - 34228412
Alignment:
Q  364 actatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  34228491 actatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattgcttatcatattaatatgttaact 34228412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 355 - 441
Target Start/End: Complemental strand, 41497139 - 41497053
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  41497139 aaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagaattatatgatcatttatcatgttaatatgttaa 41497053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 294 - 443
Target Start/End: Complemental strand, 13771188 - 13771040
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    ||||||||| |||||||||||||||||||||||||||| ||| |||||             |||||| ||||||||||| |||||||| |||||||||||    
T  13771188 ggtgtgtttagattgagggtttaggaggggaagggaggtgagagttta-cttttcgtttttaaattacggactatataacatgtttttttaaaataaatt 13771090  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||  ||| |||||| |||||||||||||||||||||||||||    
T  13771089 aagtgtgattcgagtgttatatcattgtttatcatgttaatatgttaact 13771040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 355 - 443
Target Start/End: Complemental strand, 34235190 - 34235101
Alignment:
Q  355 aaattagggactatataaaatgttttt-ctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  34235190 aaattacggattatataacatgttttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatattaatatgttaact 34235101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 294 - 442
Target Start/End: Original strand, 47390857 - 47391005
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    ||||||||||||||||||| |||||||||||||||||  |||||||||             |||||| | ||||||||| |||||||||||||||| |||    
T  47390857 ggtgtgtttggattgaggggttaggaggggaagggagtggagggttta-cttttcttttttaaattatgaactatataacatgtttttctaaaatacatt 47390955  T
Q  394 aagtgtgattgaagtattatatga-ttgtttatcatgttaatatgttaac 442  Q
    || ||||||||||||||||||||| |||||||||||||||||||||||||    
T  47390956 aattgtgattgaagtattatatgacttgtttatcatgttaatatgttaac 47391005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 22163278 - 22163206
Alignment:
Q  368 tataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgtta 440  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22163278 tatataatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgtta 22163206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 22221986 - 22221914
Alignment:
Q  368 tataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgtta 440  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22221986 tatataatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgtta 22221914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 294 - 427
Target Start/End: Complemental strand, 39856107 - 39855975
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||             |||||| ||||||||||| ||||||||||||||||||||    
T  39856107 ggtgtgtttggattgagggtttaggaggggaagggaggggagggttta-cttttcttttttaaattacggactatataacatgtttttctaaaataaatt 39856009  T
Q  394 aagtgtgattgaagtattatatgattgtttatca 427  Q
    |||||||| | ||||||||||||||  |||||||    
T  39856008 aagtgtgacttaagtattatatgatcatttatca 39855975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 355 - 443
Target Start/End: Original strand, 43230298 - 43230386
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||| ||||||| ||||||||||||||||||||||||| |||||||| |||||| ||| ||||||||||||||||||||||||    
T  43230298 aaattacggattatataacatgtttttctaaaataaattaagtgcgattgaagaattatacgatcgtttatcatgttaatatgttaact 43230386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 355 - 443
Target Start/End: Original strand, 41008244 - 41008331
Alignment:
Q  355 aaattagggactatataaaatgtttttct-aaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||||||||||| |||||||| | |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  41008244 aaattacggactatataacatgttttttttaaaataaattaagtgtgattgaagt--tatatgattgtttatcatgttaatatgttaact 41008331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 362 - 443
Target Start/End: Complemental strand, 37417808 - 37417727
Alignment:
Q  362 ggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||| ||||||||| ||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  37417808 ggactatataacatgtttttcaaaattaagttaagtgtgattgaagtattatatgatcgtttatcatgtgaatatgttaact 37417727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 355 - 443
Target Start/End: Complemental strand, 40572416 - 40572328
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||||||||||| |||||| |||||||||||||||| |||||| |||||||||||||   |||||||||||||||||||||||    
T  40572416 aaattacggactatataatatgtttctctaaaataaattaagcgtgattaaagtattatatgaccttttatcatgttaatatgttaact 40572328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 355 - 431
Target Start/End: Original strand, 17852933 - 17853009
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||| ||| || |||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  17852933 aaattacggattaaataacatgtttttctaaaataaattaagtgtgattgaggtattatatgatcgtttatcatgtt 17853009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 365 - 443
Target Start/End: Complemental strand, 4833703 - 4833625
Alignment:
Q  365 ctatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||| ||||  || ||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||    
T  4833703 ctatataacatgtaattttaaaataaattaaatgtgatttaagtattatatgattgtttatcatgttaataggttaact 4833625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 364 - 441
Target Start/End: Original strand, 26365839 - 26365916
Alignment:
Q  364 actatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    ||||||||| || ||||||||||||||| || |||||||||||||||||||||||||||| |||||||| ||| ||||    
T  26365839 actatataacatatttttctaaaataaactaggtgtgattgaagtattatatgattgtttctcatgttattattttaa 26365916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 294 - 436
Target Start/End: Complemental strand, 31571712 - 31571569
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatg-tttttctaaaataa-a 391  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||             |||||| |||| |||||| ||| ||||| ||||| || |    
T  31571712 ggtgtgtttggattgagggtttaggaggggaagcgaggggagagttta-cttttcttttttaaattacggaccatataacatgctttttttaaaaaaata 31571614  T
Q  392 ttaagtgtgattgaagtattatatgattgtttatcatgttaatat 436  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  31571613 ttaagtgtgattgaagtattatataattgtttatcatgttaatat 31571569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 384 - 439
Target Start/End: Complemental strand, 13425273 - 13425218
Alignment:
Q  384 aaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgtt 439  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  13425273 aaaataaattaagtgtgaatgaagtataatatgattgtttatcatgttaatatgtt 13425218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 377 - 431
Target Start/End: Complemental strand, 18063721 - 18063667
Alignment:
Q  377 tttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    ||||| ||||||||||||||||||||||||||||||||||||  |||||||||||    
T  18063721 tttttttaaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 18063667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 37925843 - 37925888
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtt 339  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  37925843 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtt 37925888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 436
Target Start/End: Complemental strand, 45940830 - 45940757
Alignment:
Q  363 gactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatat 436  Q
    |||||||||| || ||||||||||||||||||| ||| ||||||||||||||| || | |||| ||||||||||    
T  45940830 gactatataacatatttttctaaaataaattaaatgtaattgaagtattatattatcgcttattatgttaatat 45940757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 379 - 443
Target Start/End: Complemental strand, 32872939 - 32872875
Alignment:
Q  379 tttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||||||||||| | ||||||  || |||||| |||||||||||||||||||||||||    
T  32872939 tttctaaaataaattaagtttaattgaaagatgatatgagtgtttatcatgttaatatgttaact 32872875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 367 - 431
Target Start/End: Original strand, 33519122 - 33519186
Alignment:
Q  367 atataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    ||||||||||||||| | |||||||||||||||  |||||||||||||||||  |||||||||||    
T  33519122 atataaaatgtttttttgaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 33519186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 431
Target Start/End: Original strand, 7791794 - 7791857
Alignment:
Q  368 tataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    ||||||| |||||| ||| ||||||||| ||||||| ||||||||||||||| |||||||||||    
T  7791794 tataaaacgtttttttaacataaattaaatgtgatttaagtattatatgattatttatcatgtt 7791857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 443
Target Start/End: Original strand, 18231693 - 18231736
Alignment:
Q  400 gattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  18231693 gattgaagtattatatgatcgtttatcatgttaatatgttaact 18231736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 337
Target Start/End: Complemental strand, 36267795 - 36267752
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagaggg 337  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  36267795 ggtgtgtttggattgagggtttaggaggggaagggaggggaggg 36267752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 379 - 441
Target Start/End: Original strand, 10315719 - 10315781
Alignment:
Q  379 tttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    |||||||||||||   ||||||||||||||||||||| || ||||||| ||||||||||||||    
T  10315719 tttctaaaataaacccagtgtgattgaagtattatataatcgtttatcttgttaatatgttaa 10315781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 295 - 333
Target Start/End: Complemental strand, 31364285 - 31364247
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggaggag 333  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31364285 gtgtgtttggattgagggtttaggaggggaagggaggag 31364247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 35422041 - 35422102
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||||||||| |||||||||||||||||  ||||||||| |||||||| ||||| |||||    
T  35422041 taaaatgtttttttaaaataaattaagtgtttttgaagtatcatatgattatttattatgtt 35422102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 42306404 - 42306457
Alignment:
Q  363 gactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatg 416  Q
    |||||||||| |||| |||||||||||||||||| ||||||| |||||||||||    
T  42306404 gactatataacatgtatttctaaaataaattaagcgtgattggagtattatatg 42306457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 441
Target Start/End: Original strand, 48152055 - 48152127
Alignment:
Q  368 tataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    ||||| |||||||||||||||||||| |||||||||||||||||| |||||  ||||| |||||| ||| ||||    
T  48152055 tataacatgtttttctaaaataaatttagtgtgattgaagtatta-atgatcatttattatgttagtattttaa 48152127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 4833537 - 4833580
Alignment:
Q  298 tgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||| |||||||||||||||||||||||| |||||||||    
T  4833537 tgtttggatggagggtttaggaggggaagggaggggagggttta 4833580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 341
Target Start/End: Original strand, 13770950 - 13770997
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    |||||||||||||||||| ||||||||||||||||||| |||| ||||    
T  13770950 ggtgtgtttggattgaggatttaggaggggaagggaggggaggattta 13770997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 389 - 432
Target Start/End: Complemental strand, 18127390 - 18127347
Alignment:
Q  389 aaattaagtgtgattgaagtattatatgattgtttatcatgtta 432  Q
    ||||||||||||||||||||||||||||||  ||||||||||||    
T  18127390 aaattaagtgtgattgaagtattatatgatcatttatcatgtta 18127347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 385 - 432
Target Start/End: Original strand, 20393693 - 20393740
Alignment:
Q  385 aaataaattaagtgtgattgaagtattatatgattgtttatcatgtta 432  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||||||    
T  20393693 aaataaattaagtgtgattgaagtattatatgatcatttataatgtta 20393740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 337
Target Start/End: Complemental strand, 33519290 - 33519247
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagaggg 337  Q
    ||||||||||||| |||||||||||||||||||||||| |||||    
T  33519290 ggtgtgtttggatggagggtttaggaggggaagggaggggaggg 33519247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 36267555 - 36267598
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagaggg 337  Q
    ||||||||||||| |||||||||||||||||||||||| |||||    
T  36267555 ggtgtgtttggatggagggtttaggaggggaagggaggggaggg 36267598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 331
Target Start/End: Original strand, 37620774 - 37620813
Alignment:
Q  292 aaggtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  37620774 aaggtgtgtttggattgagggtttgggaggggaagggagg 37620813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 396 - 439
Target Start/End: Complemental strand, 47229973 - 47229930
Alignment:
Q  396 gtgtgattgaagtattatatgattgtttatcatgttaatatgtt 439  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||    
T  47229973 gtgtgattgaattattacatgattgtttatcatgttaatatgtt 47229930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 431
Target Start/End: Complemental strand, 23116420 - 23116366
Alignment:
Q  377 tttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    ||||| ||||| ||||||||||||||||||||||||||| ||  |||||||||||    
T  23116420 tttttttaaaaaaaattaagtgtgattgaagtattatataatcatttatcatgtt 23116366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 336
Target Start/End: Original strand, 25887194 - 25887236
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagg 336  Q
    ||||||||||||||||||||||| |||||||||||||| ||||    
T  25887194 ggtgtgtttggattgagggtttatgaggggaagggaggggagg 25887236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 436
Target Start/End: Complemental strand, 30891165 - 30891096
Alignment:
Q  366 tatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatat 436  Q
    ||||||| |||||||| |||| |||||||| ||||||||||||||||||| || |||||| || |||||||    
T  30891165 tatataatatgtttttttaaa-taaattaaatgtgattgaagtattatattatcgtttattatattaatat 30891096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 340
Target Start/End: Original strand, 40282203 - 40282245
Alignment:
Q  298 tgtttggattgagggtttaggaggggaagggaggagagggttt 340  Q
    |||||||||||||||||||||||||||||||||  ||||||||    
T  40282203 tgtttggattgagggtttaggaggggaagggagaggagggttt 40282245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 28074105 - 28074142
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    |||||||||||||||| |||||||||||||||||||||    
T  28074105 ggtgtgtttggattgaaggtttaggaggggaagggagg 28074142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 41496959 - 41496996
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  41496959 ggtgtgtttggatggagggtttaggaggggaagggagg 41496996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 366 - 443
Target Start/End: Original strand, 42087068 - 42087145
Alignment:
Q  366 tatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||| || || || ||||||||||||||||| |||||| |||||||| || |||| ||| ||||||||| |||||    
T  42087068 tatataacatattattttaaaataaattaagtgtaattgaattattatataatcgtttgtcacgttaatatgctaact 42087145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 48881560 - 48881597
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  48881560 ggtgtgtttggatggagggtttaggaggggaagggagg 48881597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 327
Target Start/End: Complemental strand, 48881791 - 48881758
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagg 327  Q
    ||||||||||||||||||||||||||||||||||    
T  48881791 ggtgtgtttggattgagggtttaggaggggaagg 48881758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 23029508 - 23029435
Alignment:
Q  363 gactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaac 442  Q
    |||||||||| ||||||||||||||||||      |  |||||| |||||||| | ||||||||||||||||||||||||    
T  23029508 gactatataacatgtttttctaaaataaa------ggtattgaaatattatataactgtttatcatgttaatatgttaac 23029435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 31553187 - 31553230
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggt 338  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||    
T  31553187 ggtgtgtttggatggagg-tttaggaggggaagggaggagagggt 31553230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 341
Target Start/End: Complemental strand, 18231828 - 18231781
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||||||| ||| |||||||||||||||||||| |||| ||||    
T  18231828 ggtgtgtttggatggagcgtttaggaggggaagggaggggaggattta 18231781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 19261992 - 19261945
Alignment:
Q  384 aaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||||||||| ||||||||||||| ||||||||  |||||||||||    
T  19261992 aaaataaattaattgtgattgaagtactatatgatcatttatcatgtt 19261945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 337
Target Start/End: Complemental strand, 28074350 - 28074307
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagaggg 337  Q
    ||||||||||||||||||||||||||| |||||| ||| |||||    
T  28074350 ggtgtgtttggattgagggtttaggagaggaaggaaggggaggg 28074307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 431
Target Start/End: Original strand, 38378116 - 38378183
Alignment:
Q  364 actatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    ||||||||| ||||||||  ||||||||| || ||| ||||| |||||||||||| |||||| |||||    
T  38378116 actatataacatgttttttaaaaataaatcaattgtaattgaggtattatatgatcgtttattatgtt 38378183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 341
Target Start/End: Original strand, 40196534 - 40196581
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||||||| |||||||| ||||||||||||||  |||||||||    
T  40196534 ggtgtgtttggatggagggtttgggaggggaagggagaggagggttta 40196581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 342
Target Start/End: Complemental strand, 42306571 - 42306524
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggaggagagggtttaa 342  Q
    |||||||||||||||||||||||||||||||  |||| || |||||||    
T  42306571 gtgtgtttggattgagggtttaggaggggaattgaggggatggtttaa 42306524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 428
Target Start/End: Original strand, 48093977 - 48094028
Alignment:
Q  377 tttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcat 428  Q
    ||||| |||||||||||||||||| || ||||||||||||||  ||||||||    
T  48093977 tttttttaaaataaattaagtgtggttaaagtattatatgatcatttatcat 48094028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 3143557 - 3143615
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcat 428  Q
    |||||| ||||| ||||||||||||||| |  |||||||||||||||||  ||||||||    
T  3143557 taaaatatttttataaaataaattaagtttttttgaagtattatatgatcatttatcat 3143615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 322
Target Start/End: Complemental strand, 24970409 - 24970379
Alignment:
Q  292 aaggtgtgtttggattgagggtttaggaggg 322  Q
    |||||||||||||||||||||||||||||||    
T  24970409 aaggtgtgtttggattgagggtttaggaggg 24970379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 324
Target Start/End: Complemental strand, 37417865 - 37417835
Alignment:
Q  294 ggtgtgtttggattgagggtttaggagggga 324  Q
    |||||||||||||||||||||||||||||||    
T  37417865 ggtgtgtttggattgagggtttaggagggga 37417835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 336
Target Start/End: Original strand, 39646471 - 39646513
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagg 336  Q
    |||||||||||||||| |||||||||| |||||||||| ||||    
T  39646471 ggtgtgtttggattgacggtttaggagaggaagggaggggagg 39646513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 340
Target Start/End: Complemental strand, 47391098 - 47391052
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttt 340  Q
    ||||||||||||| ||||||||| |||||||||||||| ||| ||||    
T  47391098 ggtgtgtttggatggagggtttaagaggggaagggaggggagagttt 47391052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 327
Target Start/End: Original strand, 13425122 - 13425155
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagg 327  Q
    ||||||||||||| ||||||||||||||||||||    
T  13425122 ggtgtgtttggatagagggtttaggaggggaagg 13425155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Complemental strand, 33519449 - 33519416
Alignment:
Q  383 taaaataaattaagtgtgattgaagtattatatg 416  Q
    |||||| |||||||||||||||||||||||||||    
T  33519449 taaaattaattaagtgtgattgaagtattatatg 33519416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 37620851 - 37620912
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    ||||||| |||| ||||||||||||| |||  |||||||||||||| ||  |||||||||||    
T  37620851 taaaatgattttttaaaataaattaaatgtttttgaagtattatataatcttttatcatgtt 37620912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 341
Target Start/End: Complemental strand, 47230063 - 47230014
Alignment:
Q  292 aaggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    |||||||||||| |||||||||||||||||  |||||||| |||| ||||    
T  47230063 aaggtgtgtttgaattgagggtttaggaggaaaagggaggggaggattta 47230014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 431
Target Start/End: Original strand, 21857421 - 21857485
Alignment:
Q  367 atataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||||||  |||| |||||||||||||||||  ||||| |||| ||||||  |||||||||||    
T  21857421 atataaaatccttttttaaaataaattaagtgtttttgaaatattgtatgatcatttatcatgtt 21857485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 330
Target Start/End: Original strand, 26365770 - 26365806
Alignment:
Q  295 gtgtgtttggattgagggtttagga-ggggaagggag 330  Q
    ||||||||||||||||||||||||| |||||||||||    
T  26365770 gtgtgtttggattgagggtttaggagggggaagggag 26365806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 337
Target Start/End: Original strand, 33519053 - 33519093
Alignment:
Q  297 gtgtttggattgagggtttaggaggggaagggaggagaggg 337  Q
    |||||||||| |||| ||||||||||||||||||| |||||    
T  33519053 gtgtttggatggaggttttaggaggggaagggaggggaggg 33519093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 324
Target Start/End: Complemental strand, 39646699 - 39646671
Alignment:
Q  296 tgtgtttggattgagggtttaggagggga 324  Q
    |||||||||||||||||||||||||||||    
T  39646699 tgtgtttggattgagggtttaggagggga 39646671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 1e-35; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 294 - 443
Target Start/End: Complemental strand, 1968601 - 1968453
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||||            |||||| ||||||||||| |||||||||||||||||||     
T  1968601 ggtgtgtttggattgagggtttaggaggggaagggagggaagagtttaattttcattttt-aaattacggactatataatatgtttttctaaaataaatc 1968503  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1968502 aggtgtgattgaagtattatatgatcgtttatcatgttaatatgttaact 1968453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 296 - 443
Target Start/End: Original strand, 27735749 - 27735895
Alignment:
Q  296 tgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaattaa 395  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||            |||||| ||||||||||| |||||||| |||||||||||||    
T  27735749 tgtgtttggatcgagggtttaggaggggaagggaagagagggtttaattttcattttt-aaattacggactatataacatgtttttttaaaataaattaa 27735847  T
Q  396 gtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||||||||||||||||  ||||||||||||||||| |||||    
T  27735848 gtgtgattgaagtattatatgatcatttatcatgttaatatgctaact 27735895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 294 - 440
Target Start/End: Complemental strand, 31348563 - 31348418
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||             |||| | ||||||||||| ||||||||||||||||||||    
T  31348563 ggtgtgtttggattgagagtttaggaggggaagggaggggagggttta-cttttcttttttaaataacggactatataacatgtttttctaaaataaatt 31348465  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatatgtta 440  Q
    | ||||||||||| |||||||||||||||||||||||||||||||||    
T  31348464 atgtgtgattgaattattatatgattgtttatcatgttaatatgtta 31348418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 355 - 443
Target Start/End: Original strand, 35248748 - 35248836
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  35248748 aaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattatttatcatgttaatacgttaact 35248836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 363 - 443
Target Start/End: Original strand, 36151646 - 36151726
Alignment:
Q  363 gactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36151646 gactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaact 36151726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 294 - 443
Target Start/End: Original strand, 26166939 - 26167087
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    |||||||||||||||||||||||||||||||| ||||| ||| ||||              ||||||  |||||||||| |||||| |||||||||||||    
T  26166939 ggtgtgtttggattgagggtttaggaggggaatggaggggagagtttg-tttttcttttttaaattacagactatataacatgtttctctaaaataaatt 26167037  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26167038 aagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaact 26167087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 295 - 443
Target Start/End: Complemental strand, 5731072 - 5730924
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatta 394  Q
    ||||||||| ||||||||||||||||||||||||||| ||| ||||              |||||| ||||||||||| |||||| ||||||||||||||    
T  5731072 gtgtgtttgaattgagggtttaggaggggaagggaggggagagtttgttttactttttttaaattacggactatataacatgtttctctaaaataaatta 5730973  T
Q  395 agtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||||||    
T  5730972 agtgtaattgaagtattatatgatcatttatcatgttaatatgttaact 5730924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 355 - 443
Target Start/End: Original strand, 45741952 - 45742040
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| |||||||||||  ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  45741952 aaattacggactatataacttgtttttctaaaataaattaaatgtgattgaagtattatatgatcgtttatcatgttaatatgttaact 45742040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 294 - 443
Target Start/End: Original strand, 54320437 - 54320584
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||| |            ||||||  |||||||||  ||||||||||||||||||||    
T  54320437 ggtgtgtttggattgagggtttaggagggaaagggagg-gagggtttgattttctttttt-aaattaccgactatatatcatgtttttctaaaataaatt 54320534  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  54320535 aagtgtgattggagtattatatgattgtttatcatgttaatatgctaact 54320584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 295 - 443
Target Start/End: Complemental strand, 46007942 - 46007795
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatta 394  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||             |||||   ||||||||||  ||||||| ||||||||||||    
T  46007942 gtgtgtttggattgagggtttaggaggggaagggaggggagggttta-cttttcttttttaaattgcagactatataacttgtttttgtaaaataaatta 46007844  T
Q  395 agtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||| |||||||||||||||||||  |||||||||||||||||||||||    
T  46007843 agtgagattgaagtattatatgatcatttatcatgttaatatgttaact 46007795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 294 - 443
Target Start/End: Original strand, 54935069 - 54935219
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggag-agggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaat 392  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||             |||||| | ||||||||| |||||||||||||||||||    
T  54935069 ggtgtgtttggattgagggtttaggaggggaagggagggggagggttta-cttttcttttttaaattacgaactatataacatgtttttctaaaataaat 54935167  T
Q  393 taagtgtgattgaagta-ttatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||||||||| ||||||||| ||||||||| |||||||| |||||    
T  54935168 taagtgtgattgaagtatttatatgatcgtttatcatattaatatgataact 54935219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 355 - 436
Target Start/End: Original strand, 37711205 - 37711286
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatat 436  Q
    |||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  37711205 aaattacggactatataacatgtttctctaaaataaattaagtgtgattgaagtattatatgatcatttatcatgttaatat 37711286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 364 - 443
Target Start/End: Original strand, 16400871 - 16400950
Alignment:
Q  364 actatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| || |||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||    
T  16400871 actatacaacatgtttttctaaaataaattaattatgattgaagtattatatgatcgtttatcatgttaatatgttaact 16400950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 362 - 439
Target Start/End: Complemental strand, 2917138 - 2917061
Alignment:
Q  362 ggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgtt 439  Q
    ||||||||||| ||| |||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||    
T  2917138 ggactatataacatgattttctaaaataaatttattgtgattgaagtattatatgatcgtttatcatgttaatatgtt 2917061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 366 - 441
Target Start/End: Original strand, 6891433 - 6891508
Alignment:
Q  366 tatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||| ||||    
T  6891433 tatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttataatgttattattttaa 6891508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 362 - 443
Target Start/End: Complemental strand, 49735643 - 49735562
Alignment:
Q  362 ggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||| ||||||||||||||||||| ||||||||| ||| |||||||| || |||||||||||||||| |||||||    
T  49735643 ggactatataacatgtttttctaaaataaatcaagtgtgatagaaatattatattatcgtttatcatgttaataggttaact 49735562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 355 - 443
Target Start/End: Original strand, 41174407 - 41174495
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||||||||||  ||||||||||||||||||| || ||||||||| ||||||||||||  ||||| ||||||||||| |||||    
T  41174407 aaattagggactatatagcatgtttttctaaaataaatcaaatgtgattgatgtattatatgatcatttattatgttaatatgctaact 41174495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 383 - 443
Target Start/End: Complemental strand, 45132655 - 45132595
Alignment:
Q  383 taaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  45132655 taaaataaattaagtgtgattgaagtattatatgatcgtttatcattttaatatgttaact 45132595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 294 - 434
Target Start/End: Original strand, 56135751 - 56135890
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |             |||||| | || || |||||||||||| |||||||||||    
T  56135751 ggtgtgtttggattgagggtttaggaggggaagggaggggagggttca-tttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaatt 56135849  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaat 434  Q
    ||||||  |||||||||||||||||  ||||||||||||||    
T  56135850 aagtgtttttgaagtattatatgatcatttatcatgttaat 56135890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 367 - 442
Target Start/End: Original strand, 44784066 - 44784141
Alignment:
Q  367 atataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaac 442  Q
    |||||| | ||||||||||| ||||||||||||||||||||||||||||||| |||||| | ||||||||||||||    
T  44784066 atataacaggtttttctaaagtaaattaagtgtgattgaagtattatatgatcgtttataaggttaatatgttaac 44784141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 364 - 437
Target Start/End: Original strand, 28332875 - 28332948
Alignment:
Q  364 actatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatg 437  Q
    ||||||||| | ||||||||||| |||||||||| |||||||||||||||||||| ||||| || |||||||||    
T  28332875 actatataacaggtttttctaaagtaaattaagtatgattgaagtattatatgatcgtttaccaggttaatatg 28332948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 385 - 441
Target Start/End: Complemental strand, 17938259 - 17938203
Alignment:
Q  385 aaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||    
T  17938259 aaataaattaagtgtgattgaagtattatatgatcgtttatcatgttattattttaa 17938203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 425
Target Start/End: Complemental strand, 47433951 - 47433820
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactat-ataaaatgtttttctaaaataaat 392  Q
    ||||||||||| |||| ||||||||||||||||||||  |||||||| |            ||||||  |||||| |||| |||||||| ||||||||||    
T  47433951 ggtgtgtttgggttgacggtttaggaggggaagggagaggagggttt-acttttcttttttaaattacagactataataacatgtttttttaaaataaat 47433853  T
Q  393 taagtgtgattgaagtattatatgattgtttat 425  Q
    |||||||||||||||||||||||||| ||||||    
T  47433852 taagtgtgattgaagtattatatgatcgtttat 47433820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 366 - 441
Target Start/End: Complemental strand, 2247973 - 2247899
Alignment:
Q  366 tatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    ||||||| |||||||||||||| |||| | |||||||||||||||||||| |||||||||||| |||||| |||||    
T  2247973 tatataacatgtttttctaaaaaaaat-atgtgtgattgaagtattatataattgtttatcatattaataagttaa 2247899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 372 - 431
Target Start/End: Original strand, 34995130 - 34995189
Alignment:
Q  372 aaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    ||||||||||||||||||||||||||||  ||||||||||||| |||| |||||||||||    
T  34995130 aaatgtttttctaaaataaattaagtgtttttgaagtattataagattatttatcatgtt 34995189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 294 - 341
Target Start/End: Complemental strand, 49735734 - 49735687
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  49735734 ggtgtgtttggattgagggtttaggaggggaagggaggggagggttta 49735687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 340
Target Start/End: Complemental strand, 54320676 - 54320630
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttt 340  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  54320676 ggtgtgtttggattgagggtttaggaggggaagggaggggagggttt 54320630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 366 - 424
Target Start/End: Original strand, 54494712 - 54494769
Alignment:
Q  366 tatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgttta 424  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  54494712 tatacaaaatgttttt-taaaataagttaagtgtgattgaagtattatatgattgttta 54494769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 443
Target Start/End: Complemental strand, 24565526 - 24565440
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| || |||||||| ||||||||||| |||||  | || ||||||||||||||||||| |||||||||| ||||||| |||||||    
T  24565526 aaattacgggctatataacatgtttttctataataa--tgagcgtgattgaagtattatatgtttgtttatcacgttaataagttaact 24565440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 43961487 - 43961548
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||||||||| |||||||||||||||||  |||||||||||||||||  |||||||||||    
T  43961487 taaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 43961548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 49735470 - 49735515
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtt 339  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  49735470 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtt 49735515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 55510247 - 55510308
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||  || ||||||||    
T  55510247 taaaatgtttttttaaaataaattaagtgtgactgaagtattatatgatcattcatcatgtt 55510308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 339
Target Start/End: Complemental strand, 27735990 - 27735942
Alignment:
Q  291 caaggtgtgtttggattgagggtttaggaggggaagggaggagagggtt 339  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  27735990 caaggtgtgtttggatggagggtttaggaggggaagggaggatagggtt 27735942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 341
Target Start/End: Complemental strand, 37711365 - 37711318
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||    
T  37711365 ggtgtgtttggatggagggtttaggaggggaagggaggggagggttta 37711318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 341
Target Start/End: Complemental strand, 54935311 - 54935264
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||    
T  54935311 ggtgtgtttggatggagggtttaggaggggaagggaggggagggttta 54935264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 385 - 443
Target Start/End: Original strand, 34110897 - 34110955
Alignment:
Q  385 aaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||| |||||||| || || ||||||||||| ||||||||||||||||||||||||    
T  34110897 aaataaagtaagtgtgcttaaaatattatatgatcgtttatcatgttaatatgttaact 34110955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 377 - 431
Target Start/End: Complemental strand, 47846215 - 47846161
Alignment:
Q  377 tttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    ||||| |||||||||||||||||  |||||||||||||||||| |||||||||||    
T  47846215 tttttttaaaataaattaagtgtttttgaagtattatatgattatttatcatgtt 47846161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 364 - 428
Target Start/End: Original strand, 22921052 - 22921117
Alignment:
Q  364 actatataaaatgtttttctaaaataaattaa-gtgtgattgaagtattatatgattgtttatcat 428  Q
    |||| |||| ||||||||||| ||||||| || ||||||||||||||||||||||| |||||||||    
T  22921052 actacataacatgtttttctagaataaatcaaagtgtgattgaagtattatatgatcgtttatcat 22921117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 364 - 428
Target Start/End: Complemental strand, 22970747 - 22970682
Alignment:
Q  364 actatataaaatgtttttctaaaataaattaa-gtgtgattgaagtattatatgattgtttatcat 428  Q
    |||| |||| ||||||||||| ||||||| || ||||||||||||||||||||||| |||||||||    
T  22970747 actacataacatgtttttctagaataaatcaaagtgtgattgaagtattatatgatcgtttatcat 22970682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 368 - 431
Target Start/End: Complemental strand, 18516640 - 18516577
Alignment:
Q  368 tataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    ||||||||||||||  ||||| |||||||||||||||||| ||||| ||||  |||||||||||    
T  18516640 tataaaatgtttttaaaaaatgaattaagtgtgattgaagcattatgtgatcatttatcatgtt 18516577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 29798358 - 29798422
Alignment:
Q  363 gactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||||||| ||||||||||    ||||| ||||||||||||||||||||||||| |||||| |||||    
T  29798358 gactatataacatgtttttct----taaatcaagtgtgattgaagtattatatgatcgtttattatgtt 29798422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 341
Target Start/End: Complemental strand, 41174587 - 41174540
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||||||| |||||||||||||||||||||||| || ||||||    
T  41174587 ggtgtgtttggatggagggtttaggaggggaagggaggggatggttta 41174540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 17182652 - 17182594
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcat 428  Q
    |||||| ||||| |||||||||||||||||  |||||||||||||||||  ||||||||    
T  17182652 taaaatatttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcat 17182594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 341
Target Start/End: Original strand, 6938281 - 6938330
Alignment:
Q  292 aaggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||| |||||||||||| | |||||||||||||||||||||||| ||||    
T  6938281 aaggtttgtttggattgatgatttaggaggggaagggaggagaggattta 6938330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 7977739 - 7977694
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtt 339  Q
    ||||||||||||||||||||||| |||||||| ||||| |||||||    
T  7977739 ggtgtgtttggattgagggtttatgaggggaaaggaggggagggtt 7977694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 22186796 - 22186857
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||||||||| |||||||||| ||||||  |||||||||||||| ||  |||||||||||    
T  22186796 taaaatgtttttttaaaataaataaagtgtttttgaagtattatataatcatttatcatgtt 22186857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 341
Target Start/End: Complemental strand, 47846300 - 47846251
Alignment:
Q  292 aaggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||||||||||||||||||| |||| ||||||| | |||||||||    
T  47846300 aaggtgtgtttggattgagggtttaagaggagaagggatgggagggttta 47846251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 53260720 - 53260757
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  53260720 ggtgtgtttggatggagggtttaggaggggaagggagg 53260757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 54576327 - 54576372
Alignment:
Q  292 aaggtgtgtttggattgagggtttaggaggggaagggaggagaggg 337  Q
    ||||||||||||||| |||||||||| ||||||||||||| |||||    
T  54576327 aaggtgtgtttggatggagggtttagaaggggaagggaggggaggg 54576372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 55080581 - 55080626
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtt 339  Q
    ||||||||||||||||||||||||||| ||||| ||||||| ||||    
T  55080581 ggtgtgtttggattgagggtttaggagaggaagagaggagatggtt 55080626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 418
Target Start/End: Complemental strand, 21695040 - 21695008
Alignment:
Q  386 aataaattaagtgtgattgaagtattatatgat 418  Q
    |||||||||||||||||||||||||||||||||    
T  21695040 aataaattaagtgtgattgaagtattatatgat 21695008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 432
Target Start/End: Original strand, 41227576 - 41227619
Alignment:
Q  389 aaattaagtgtgattgaagtattatatgattgtttatcatgtta 432  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||    
T  41227576 aaattaagtgtgattgaagtattatatgatcatttatcacgtta 41227619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 341
Target Start/End: Complemental strand, 45132737 - 45132690
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    |||||||||| |||||| ||||||||||||||| ||||||| ||||||    
T  45132737 ggtgtgtttgaattgagagtttaggaggggaagagaggagatggttta 45132690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 325
Target Start/End: Original strand, 45741892 - 45741923
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaa 325  Q
    ||||||||||||||||||||||||||||||||    
T  45741892 ggtgtgtttggattgagggtttaggaggggaa 45741923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 34110803 - 34110837
Alignment:
Q  297 gtgtttggattgagggtttaggaggggaagggagg 331  Q
    |||||||||||||||||||||||||||||| ||||    
T  34110803 gtgtttggattgagggtttaggaggggaagagagg 34110837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 35565565 - 35565603
Alignment:
Q  299 gtttggattgagggtttaggaggggaagggaggagaggg 337  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  35565565 gtttggattgagggtttagcaggggaagggaggggaggg 35565603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 324
Target Start/End: Original strand, 41174358 - 41174388
Alignment:
Q  294 ggtgtgtttggattgagggtttaggagggga 324  Q
    |||||||||||||||||||||||||||||||    
T  41174358 ggtgtgtttggattgagggtttaggagggga 41174388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 336
Target Start/End: Original strand, 44145775 - 44145817
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagg 336  Q
    |||||||||||||| | ||||||||||||||||||||| ||||    
T  44145775 ggtgtgtttggattcaaggtttaggaggggaagggaggggagg 44145817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 431
Target Start/End: Original strand, 14539357 - 14539410
Alignment:
Q  378 ttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||| |||||||||||||||||  |||||||||||||||||  ||||| |||||    
T  14539357 ttttttaaaataaattaagtgtttttgaagtattatatgatcatttattatgtt 14539410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 22186721 - 22186758
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  22186721 ggtgtatttggattgagggtttaggaagggaagggagg 22186758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 418
Target Start/End: Complemental strand, 23332686 - 23332653
Alignment:
Q  385 aaataaattaagtgtgattgaagtattatatgat 418  Q
    |||||||||||||||||| |||||||||||||||    
T  23332686 aaataaattaagtgtgatagaagtattatatgat 23332653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 432
Target Start/End: Original strand, 23813163 - 23813240
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtta 432  Q
    |||||| ||||  ||||||||||||||  ||| ||||| |||||| ||||||||| ||||||||  |||||| |||||    
T  23813163 aaattacggacactataaaatgtttttgaaaattaaataaagtgttattgaagtactatatgatcatttatcgtgtta 23813240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 329
Target Start/End: Complemental strand, 47846507 - 47846470
Alignment:
Q  292 aaggtgtgtttggattgagggtttaggaggggaaggga 329  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  47846507 aaggtgtgtttggattgagggtttaagaggagaaggga 47846470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 434
Target Start/End: Complemental strand, 54001271 - 54001206
Alignment:
Q  370 taaaatgtttttctaaaataaattaa-gtgtgattgaagtattatatgattgtttatcatgttaat 434  Q
    |||||||| ||| |||||||||| || ||||  |||||||||||||||||  ||||||||||||||    
T  54001271 taaaatgtctttttaaaataaataaaagtgtttttgaagtattatatgatcatttatcatgttaat 54001206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 55080656 - 55080717
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    ||||||||||||  ||||||| ||||||||  |||||||||| ||||||  |||||||||||    
T  55080656 taaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgtt 55080717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 326
Target Start/End: Complemental strand, 2248043 - 2248011
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaag 326  Q
    |||||||||||||||||||||||||||| ||||    
T  2248043 ggtgtgtttggattgagggtttaggaggagaag 2248011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 418
Target Start/End: Original strand, 5307077 - 5307132
Alignment:
Q  362 ggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgat 418  Q
    |||| |||||||||||||||  ||||||||| ||||||||||| |||||| ||||||    
T  5307077 ggaccatataaaatgtttttg-aaaataaatcaagtgtgattgcagtattttatgat 5307132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 331
Target Start/End: Original strand, 16400803 - 16400839
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  16400803 gtgtgattggattgagggtttaggaggagaagggagg 16400839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 326
Target Start/End: Original strand, 27775589 - 27775617
Alignment:
Q  298 tgtttggattgagggtttaggaggggaag 326  Q
    |||||||||||||||||||||||||||||    
T  27775589 tgtttggattgagggtttaggaggggaag 27775617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 326
Target Start/End: Original strand, 29798290 - 29798322
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaag 326  Q
    |||||||||||||||| ||||||||||||||||    
T  29798290 ggtgtgtttggattgatggtttaggaggggaag 29798322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 432
Target Start/End: Complemental strand, 34108379 - 34108331
Alignment:
Q  384 aaaataaattaagtgtgattgaagtattatatgattgtttatcatgtta 432  Q
    |||||||||||||| ||||||||||||||||  ||  ||||||||||||    
T  34108379 aaaataaattaagtatgattgaagtattatacaataatttatcatgtta 34108331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 431
Target Start/End: Original strand, 47694435 - 47694487
Alignment:
Q  379 tttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||||||| ||| ||||| | |||||||||||||||||  |||||||||||    
T  47694435 tttctaaaatcaatcaagtgcggttgaagtattatatgatcatttatcatgtt 47694487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 326
Target Start/End: Original strand, 51329798 - 51329830
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaag 326  Q
    ||||||||||||||||| |||||||||||||||    
T  51329798 ggtgtgtttggattgagagtttaggaggggaag 51329830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 9e-34; HSPs: 72)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 294 - 443
Target Start/End: Complemental strand, 7503196 - 7503048
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    |||||||||||||||||| ||| |||||||| |||||| |||||||||             |||||| ||| ||||||| ||||||||||||||||||||    
T  7503196 ggtgtgtttggattgaggctttgggaggggaggggaggggagggttta-cttttcgtttttaaattatggattatataacatgtttttctaaaataaatt 7503098  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7503097 aagtgtgattaaagtattatatgattgtttatcatgttaatatgttaact 7503048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 294 - 443
Target Start/End: Complemental strand, 31543314 - 31543166
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||             |||||| |||| |||||| ||||||||||||||||||||    
T  31543314 ggtgtgtttcgattgagggtttaggaggggaagggaggggagggttta-cttttcttttttaaattatggaccatataacatgtttttctaaaataaatt 31543216  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||||||||||||||||  |||||| |||||||||||||||||    
T  31543215 aagtgtgattgaagtattatatgaccgtttatgatgttaatatgttaact 31543166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 355 - 443
Target Start/End: Complemental strand, 1027030 - 1026943
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  1027030 aaattacggactatataaa-tgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaact 1026943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 356 - 441
Target Start/End: Original strand, 6315125 - 6315210
Alignment:
Q  356 aattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  6315125 aattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatacgatcgtttatcaagttaatatgttaa 6315210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 366 - 443
Target Start/End: Complemental strand, 11575577 - 11575500
Alignment:
Q  366 tatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  11575577 tatataacatgtttttctaaaataaattaagtgtgattaaagtattatatgatcgtttatcatgttaatatgttaact 11575500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 355 - 430
Target Start/End: Complemental strand, 42650518 - 42650443
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgt 430  Q
    |||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42650518 aaattacggaatatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgt 42650443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 298 - 443
Target Start/End: Original strand, 1281149 - 1281293
Alignment:
Q  298 tgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaattaagt 397  Q
    |||||||||||||||||||||||||||||||| |||||||||||             |||||| |||| |||||| |||||||||||| |||||| ||||    
T  1281149 tgtttggattgagggtttaggaggggaagggatgagagggttta-cttttcttttttaaattacggacgatataacatgtttttctaagataaatcaagt 1281247  T
Q  398 gtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||| |||||||||||||| || |||||| |||||||||||||||||    
T  1281248 gtggttgaagtattatattatcgtttattatgttaatatgttaact 1281293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 355 - 443
Target Start/End: Original strand, 16653011 - 16653099
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||| ||||||  ||||||||||||||||    
T  16653011 aaattacggactatataacatgtttttataaaataaatcaagtgtgattgaagtattatatgatcgtttattttgttaatatgttaact 16653099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 363 - 443
Target Start/End: Original strand, 37032449 - 37032529
Alignment:
Q  363 gactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||| |||||||| ||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||    
T  37032449 gactatataacatgtttttttaaaataaattaagtgtgattaaagtattatatgatagtttatcatcttaatatgttaact 37032529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 355 - 443
Target Start/End: Complemental strand, 40990366 - 40990278
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||||||||||| |||||| | ||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||    
T  40990366 aaattacggactatataacatgtttctttaaaataaattaagtctgattgaagtattatatgatcgcttatcatgttaatatgttaact 40990278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 292 - 443
Target Start/End: Original strand, 28083742 - 28083892
Alignment:
Q  292 aaggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaa 391  Q
    |||||||||| |||||||||||||||||||||||||||||||||  |||              ||||||  ||| |||||| |||||| |||||||||||    
T  28083742 aaggtgtgttcggattgagggtttaggaggggaagggaggagagattttg-tttttcttttttaaattacagacaatataacatgtttctctaaaataaa 28083840  T
Q  392 ttaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||||| |||||||||||||||||||||||||| | |||||||||    
T  28083841 ttaagtgtgattggagtattatatgattgtttatcatgttgacatgttaact 28083892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 365 - 432
Target Start/End: Complemental strand, 41103678 - 41103611
Alignment:
Q  365 ctatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtta 432  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41103678 ctatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgtta 41103611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 355 - 441
Target Start/End: Original strand, 7979202 - 7979288
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    |||||| ||||||||||| ||||||||||||||||||| |||||  ||||||||||||||||||| ||||||||||||||| |||||    
T  7979202 aaattacggactatataacatgtttttctaaaataaatcaagtgcaattgaagtattatatgattatttatcatgttaataagttaa 7979288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 294 - 443
Target Start/End: Complemental strand, 9718721 - 9718573
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    |||||||||||||||||||||||||||| ||||||||| ||  |||||             |||||| | ||||||||| || ||||||||||||  |||    
T  9718721 ggtgtgtttggattgagggtttaggaggagaagggaggggaaagttta-cttttcttttttaaattatgaactatataacatatttttctaaaattcatt 9718623  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    || ||||||||||||||||||||||||||||||||||||||||| |||||    
T  9718622 aattgtgattgaagtattatatgattgtttatcatgttaatatgctaact 9718573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 363 - 439
Target Start/End: Original strand, 36308912 - 36308989
Alignment:
Q  363 gactatataaaatgtttttc-taaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgtt 439  Q
    |||||||||| ||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  36308912 gactatataacatgttttttataaaataaactaagtgtgattgaagtattatatgattgtttatcatgttaatatgtt 36308989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 355 - 443
Target Start/End: Original strand, 11785588 - 11785676
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| | ||||||||| |||||||||||||||| ||||| || ||||||||||||||||| |||||||||||||||||||| |||||    
T  11785588 aaattatgaactatataacatgtttttctaaaatacattaattgcgattgaagtattatatgtttgtttatcatgttaatatgctaact 11785676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 363 - 443
Target Start/End: Original strand, 31738493 - 31738573
Alignment:
Q  363 gactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||| |||||| |||| |||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||    
T  31738493 gactatataacatgtttctctagaataaattaagtgtaattgaagtattatatgatcatttatcatgttaatatgttaact 31738573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 362 - 441
Target Start/End: Original strand, 11033486 - 11033565
Alignment:
Q  362 ggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    ||||||||||  ||||||||||||||||||||| |||||||||||  |||||||||| ||||||||||||||||||||||    
T  11033486 ggactatatatcatgtttttctaaaataaattatgtgtgattgaataattatatgatcgtttatcatgttaatatgttaa 11033565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 362 - 443
Target Start/End: Original strand, 33922589 - 33922670
Alignment:
Q  362 ggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||| || ||||| ||||||||||| ||| |||||||||||| |||||||||||||||||| |||||||||||||    
T  33922589 ggactatataacatatttttttaaaataaatttagtatgattgaagtatgatatgattgtttatcatgataatatgttaact 33922670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 363 - 443
Target Start/End: Original strand, 30664431 - 30664511
Alignment:
Q  363 gactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||| ||||| ||||||||| |||||||||||||||||||||||||||||||| |  ||||||||| ||||||||||||||    
T  30664431 gactttataacatgtttttcaaaaataaattaagtgtgattgaagtattatataaccgtttatcatattaatatgttaact 30664511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 363 - 443
Target Start/End: Complemental strand, 37923252 - 37923172
Alignment:
Q  363 gactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||| ||||||||||||||||||||||||| |||| || |||||||||||  |||||||||||||||| ||||||    
T  37923252 gactatataacatgtttttctaaaataaattaagtgcgattaaaatattatatgatcatttatcatgttaatattttaact 37923172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 366 - 441
Target Start/End: Complemental strand, 29358510 - 29358435
Alignment:
Q  366 tatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    ||||||| || |||||||| ||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||    
T  29358510 tatataacatatttttctagaataaattaagtgtgattgaagtattataggatcgtttataatgttaatatgttaa 29358435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 374 - 443
Target Start/End: Complemental strand, 4247680 - 4247611
Alignment:
Q  374 atgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||| ||||||||||||||| ||||| |||||||||||||| |||||||||| |||||||||||||    
T  4247680 atgtttttttaaaataaattaagtatgatttaagtattatatgatcgtttatcatgctaatatgttaact 4247611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 363 - 433
Target Start/End: Complemental strand, 3727029 - 3726959
Alignment:
Q  363 gactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaa 433  Q
    |||||||||| |||||||||||||||||||||||  |||||||| ||||||||||  ||||||||||||||    
T  3727029 gactatataacatgtttttctaaaataaattaagcatgattgaaatattatatgaccgtttatcatgttaa 3726959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 363 - 441
Target Start/End: Original strand, 13405046 - 13405124
Alignment:
Q  363 gactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    |||||||||| |||||||||||||||||||||  | | |||||| ||||||||||| |||||||||||||||| |||||    
T  13405046 gactatataacatgtttttctaaaataaattatatataattgaattattatatgatcgtttatcatgttaatacgttaa 13405124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 294 - 431
Target Start/End: Complemental strand, 12022385 - 12022249
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    |||||||||||||||||||||||||||||||| ||||| ||||| | |             |||||| |||| || |||||||||||| |||||||||||    
T  12022385 ggtgtgtttggattgagggtttaggaggggaaaggaggggagggctca-cttttattttttaaattacggacaatgtaaaatgtttttttaaaataaatt 12022287  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    ||||||  |||||||||||||||||  |||||||||||    
T  12022286 aagtgtttttgaagtattatatgatcatttatcatgtt 12022249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 374 - 443
Target Start/End: Complemental strand, 30479880 - 30479811
Alignment:
Q  374 atgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||  |||||||  ||||||||||||||    
T  30479880 atgtttttctaaaataaatcaagtgtgattgaagtattatattatcatttatcaccttaatatgttaact 30479811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 443
Target Start/End: Original strand, 2248454 - 2248602
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    ||||||||||||||||| |||||||||||||||||||| ||| ||| ||            |||||| ||  ||||||| |||||||||||||||||||     
T  2248454 ggtgtgtttggattgagagtttaggaggggaagggaggggagagttcaatttcctttttt-aaattacggtttatataacatgtttttctaaaataaatc 2248552  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||| | ||||||||||  |||||  ||||||||| |||||||    
T  2248553 aagtgtgattggaatattatatgaccgtttacgatgttaataagttaact 2248602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 368 - 431
Target Start/End: Original strand, 27487065 - 27487128
Alignment:
Q  368 tataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||||||||  |||||||||||    
T  27487065 tataaaatgtttttctaaaaccaattaagtgttattgaagtattatatgatcatttatcatgtt 27487128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 392 - 443
Target Start/End: Complemental strand, 29691067 - 29691016
Alignment:
Q  392 ttaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  29691067 ttaagtgtgattgaagtatcatatgatcgtttatcatgttaatatgttaact 29691016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 341
Target Start/End: Complemental strand, 43732929 - 43732882
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||    
T  43732929 ggtgtgtttggatggagggtttaggaggggaagggaggggagggttta 43732882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 8815383 - 8815338
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtt 339  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||    
T  8815383 ggtgtgtttggattgagggtttaggagggggagggaggggagggtt 8815338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 355 - 424
Target Start/End: Original strand, 10028172 - 10028241
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgttta 424  Q
    |||||| |||| |||||| || ||||| |||||||||||||||||| ||||||| ||||||||| |||||    
T  10028172 aaattacggaccatataacatatttttttaaaataaattaagtgtggttgaagtcttatatgatcgttta 10028241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 369 - 429
Target Start/End: Original strand, 27483636 - 27483696
Alignment:
Q  369 ataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatg 429  Q
    ||||||||||||| | |||||||| |||||| ||||||||||||||||||  |||||||||    
T  27483636 ataaaatgttttttttaaataaataaagtgttattgaagtattatatgataatttatcatg 27483696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 431
Target Start/End: Complemental strand, 30581964 - 30581916
Alignment:
Q  383 taaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    ||||| ||||||||||||||||||||||||||||||  |||||||||||    
T  30581964 taaaacaaattaagtgtgattgaagtattatatgatcatttatcatgtt 30581916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 415
Target Start/End: Original strand, 34633819 - 34633859
Alignment:
Q  375 tgtttttctaaaataaattaagtgtgattgaagtattatat 415  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  34633819 tgtttttctaaaataaatcaagtgtgattgaagtattatat 34633859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 43732681 - 43732717
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggag 330  Q
    |||||||||||||||||||||||||||||||||||||    
T  43732681 ggtgtgtttggattgagggtttaggaggggaagggag 43732717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 331
Target Start/End: Complemental strand, 7394701 - 7394666
Alignment:
Q  296 tgtgtttggattgagggtttaggaggggaagggagg 331  Q
    ||||||||||||||||||||||||||||||||||||    
T  7394701 tgtgtttggattgagggtttaggaggggaagggagg 7394666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 385 - 432
Target Start/End: Complemental strand, 24243199 - 24243152
Alignment:
Q  385 aaataaattaagtgtgattgaagtattatatgattgtttatcatgtta 432  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||||    
T  24243199 aaattaattaagtgtgattgaagtattatatgatcatttatcatgtta 24243152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 36309081 - 36309038
Alignment:
Q  298 tgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||| |||||||||||||||||||||||| |||||||||    
T  36309081 tgtttggatggagggtttaggaggggaagggaggggagggttta 36309038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 368 - 431
Target Start/End: Complemental strand, 38198217 - 38198155
Alignment:
Q  368 tataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||| ||||||| |||||| |||||||||||||||||||||||||||||  | |||||||||    
T  38198217 tataaagtgttttt-taaaatgaattaagtgtgattgaagtattatatgatcatatatcatgtt 38198155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 340
Target Start/End: Original strand, 41103506 - 41103552
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttt 340  Q
    ||||||||||||| ||||||||||||||||||| |||| ||||||||    
T  41103506 ggtgtgtttggatggagggtttaggaggggaagagaggggagggttt 41103552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 4247762 - 4247725
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    |||||||||||||||| |||||||||||||||||||||    
T  4247762 ggtgtgtttggattgaaggtttaggaggggaagggagg 4247725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 16024155 - 16024192
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    |||||||||||||||||||||||||| |||||||||||    
T  16024155 ggtgtgtttggattgagggtttaggaagggaagggagg 16024192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 431
Target Start/End: Original strand, 16024227 - 16024292
Alignment:
Q  367 atataaaatg-tttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||||||| ||||| | |||||||||||||||  |||||||||||||||||  |||||||||||    
T  16024227 atataaaatgattttttttaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 16024292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 377 - 418
Target Start/End: Complemental strand, 35694915 - 35694874
Alignment:
Q  377 tttttctaaaataaattaagtgtgattgaagtattatatgat 418  Q
    ||||| |||||||||| |||||||||||||||||||||||||    
T  35694915 tttttttaaaataaatcaagtgtgattgaagtattatatgat 35694874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 342
Target Start/End: Complemental strand, 31738665 - 31738617
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaa 342  Q
    ||||||||||||| |||||||||||||||||||  ||| ||||||||||    
T  31738665 ggtgtgtttggatggagggtttaggaggggaagaaaggggagggtttaa 31738617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 329
Target Start/End: Original strand, 3726865 - 3726900
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaaggga 329  Q
    ||||||||||||| ||||||||||||||||||||||    
T  3726865 ggtgtgtttggatggagggtttaggaggggaaggga 3726900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 432
Target Start/End: Original strand, 6453268 - 6453323
Alignment:
Q  377 tttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtta 432  Q
    ||||| ||||||| |||||||||  ||||||||||||||||||  |||||||||||    
T  6453268 tttttttaaaatatattaagtgtttttgaagtattatatgattacttatcatgtta 6453323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 329
Target Start/End: Original strand, 13404978 - 13405013
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaaggga 329  Q
    |||||| |||||||||||||||||||||||||||||    
T  13404978 ggtgtggttggattgagggtttaggaggggaaggga 13405013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 342
Target Start/End: Complemental strand, 16653190 - 16653143
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggaggagagggtttaa 342  Q
    ||||||||||||  | |||||| |||||||||||||||||||||||||    
T  16653190 gtgtgtttggatgaatggtttaagaggggaagggaggagagggtttaa 16653143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 31543078 - 31543121
Alignment:
Q  298 tgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||| ||||||||| |||||||||||||| |||||||||    
T  31543078 tgtttggatggagggtttaagaggggaagggaggggagggttta 31543121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 418
Target Start/End: Complemental strand, 1227930 - 1227884
Alignment:
Q  372 aaatgtttttctaaaataaattaagtgtgattgaagtattatatgat 418  Q
    |||||||| |||||||||  |||| ||||||||||||||||||||||    
T  1227930 aaatgtttgtctaaaatatgttaaatgtgattgaagtattatatgat 1227884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 341
Target Start/End: Complemental strand, 16024394 - 16024348
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    |||||||||||| |||| ||||||||||||||||||| ||| |||||    
T  16024394 gtgtgtttggatggaggatttaggaggggaagggaggggagagttta 16024348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 340
Target Start/End: Complemental strand, 40990425 - 40990380
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttt 340  Q
    ||||||||||||||||||| ||||||| |||||||||||||| ||||    
T  40990425 ggtgtgtttggattgaggg-ttaggagaggaagggaggagagagttt 40990380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 1027090 - 1027053
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  1027090 ggtgtgtttggattaagggtttaggaagggaagggagg 1027053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 331
Target Start/End: Complemental strand, 2482011 - 2481978
Alignment:
Q  298 tgtttggattgagggtttaggaggggaagggagg 331  Q
    ||||||||| ||||||||||||||||||||||||    
T  2482011 tgtttggatggagggtttaggaggggaagggagg 2481978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 327
Target Start/End: Original strand, 6315068 - 6315101
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagg 327  Q
    |||||||||||||||||||||||||||| |||||    
T  6315068 ggtgtgtttggattgagggtttaggaggcgaagg 6315101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 8815143 - 8815180
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  8815143 ggtgtgtttggatggagggtttaggaggggaagagagg 8815180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 11033421 - 11033458
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    |||||||||||||||||||||||| || ||||||||||    
T  11033421 ggtgtgtttggattgagggtttagaagaggaagggagg 11033458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 341
Target Start/End: Complemental strand, 11575646 - 11575601
Alignment:
Q  296 tgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    |||||||||||| ||||||||||| | ||||||||| |||||||||    
T  11575646 tgtgtttggattcagggtttaggatgagaagggaggggagggttta 11575601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 30365132 - 30365169
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  30365132 ggtgtgtttggattgagggtttaggaggagaaaggagg 30365169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 34634385 - 34634340
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtt 339  Q
    ||||||||||||| ||| |||||||||||||||||| | |||||||    
T  34634385 ggtgtgtttggatggagagtttaggaggggaagggatgtgagggtt 34634340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 43826409 - 43826470
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    ||||||||||||  ||||||| ||||||||  |||||||||| ||||||  |||||||||||    
T  43826409 taaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgtt 43826470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 331
Target Start/End: Original strand, 2412967 - 2413003
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  2412967 gtgtgtttggatggagggtttaggaggggaggggagg 2413003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 8671961 - 8671913
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgat 418  Q
    |||||||| ||| ||||||||||||||| |  |||||||||||||||||    
T  8671961 taaaatgtatttttaaaataaattaagtatttttgaagtattatatgat 8671913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 431
Target Start/End: Original strand, 26167846 - 26167894
Alignment:
Q  383 taaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||||||| ||| || ||||||||||||||||||  |||||||||||    
T  26167846 taaaataaataaagagttattgaagtattatatgatcatttatcatgtt 26167894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 428
Target Start/End: Original strand, 34552637 - 34552696
Alignment:
Q  368 tataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcat 428  Q
    |||| ||||||||| |||||| ||||||| || ||||||||||||||||||  ||||||||    
T  34552637 tatataatgttttt-taaaattaattaagcgtaattgaagtattatatgatcatttatcat 34552696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 40632998 - 40633034
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggag 330  Q
    |||||||||| || |||||||||||||||||||||||    
T  40632998 ggtgtgtttgaatggagggtttaggaggggaagggag 40633034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 428
Target Start/End: Complemental strand, 42919897 - 42919838
Alignment:
Q  368 tataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcat 428  Q
    |||||||| ||||| ||||||||||||| | | ||||||||||| ||||||| ||||||||    
T  42919897 tataaaatattttt-taaaataaattaaatataattgaagtattttatgattatttatcat 42919838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 43732778 - 43732822
Alignment:
Q  384 aaaataaattaagtgtgattgaagtattatatgattgtttatcat 428  Q
    ||||||||||||||||  |||||||||||||||||  ||||||||    
T  43732778 aaaataaattaagtgtttttgaagtattatatgatcatttatcat 43732822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 44119744 - 44119788
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggt 338  Q
    |||||||||||||||||||||||| |||| ||  |||||||||||    
T  44119744 ggtgtgtttggattgagggtttagaagggaaaaagaggagagggt 44119788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 9e-34; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 294 - 443
Target Start/End: Original strand, 24560219 - 24560367
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||              |||||| ||||||| ||| ||||||||||||||||||||    
T  24560219 ggtgtgtttggattaagggtttaggaggggaagggaggggagggtttg-tttttcttttttaaattacggactatgtaacatgtttttctaaaataaatt 24560317  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    || |||||||||||||||||||||| ||||||||||||||||||||||||    
T  24560318 aaatgtgattgaagtattatatgatcgtttatcatgttaatatgttaact 24560367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 355 - 443
Target Start/End: Original strand, 21773844 - 21773932
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  21773844 aaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagaattatatgattgtttatcatgtaaatatgttaact 21773932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 355 - 443
Target Start/End: Complemental strand, 41110503 - 41110415
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| |||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41110503 aaattacggactagataacatgtttttcgaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 41110415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 295 - 443
Target Start/End: Complemental strand, 18654842 - 18654694
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatta 394  Q
    ||||||||| ||||||||||||||||||||||||||| ||| ||||              |||||| ||||||||||| |||||| ||||||||||||||    
T  18654842 gtgtgtttgaattgagggtttaggaggggaagggaggggagagtttgttttactttttttaaattacggactatataacatgtttctctaaaataaatta 18654743  T
Q  395 agtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||||||    
T  18654742 agtgtaattgaagtattatatgatcatttatcatgttaatatgttaact 18654694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 294 - 443
Target Start/End: Complemental strand, 25655214 - 25655064
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    ||||||||||||||||||||| | |||| ||||||||| ||||||||||            |||||| ||||||||||| ||||||||||||||||||||    
T  25655214 ggtgtgtttggattgagggttgaagaggagaagggaggggagggtttaactttcattttt-aaattacggactatataacatgtttttctaaaataaatt 25655116  T
Q  394 aagtgtgattgaagtatt--atatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||||||||||  |||||||  |||||||| ||||||||||||||    
T  25655115 aagtgtgattgaagtattatatatgatcatttatcatattaatatgttaact 25655064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 355 - 440
Target Start/End: Complemental strand, 27542113 - 27542028
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgtta 440  Q
    |||||| | ||||||||| || ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  27542113 aaattatgaactatataacatatttttctaaaataaattaactgtgattgaagtattatatgatcgtttatcatgttaatatgtta 27542028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 374 - 443
Target Start/End: Complemental strand, 36569066 - 36568997
Alignment:
Q  374 atgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  36569066 atgtttttctaaaataaattaagtgtgattgaactattatacgattgtttatcatgttaatatgttaact 36568997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 363 - 443
Target Start/End: Original strand, 14898046 - 14898126
Alignment:
Q  363 gactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  14898046 gactatatgacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcgtgttaatatattaact 14898126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 367 - 443
Target Start/End: Complemental strand, 16275875 - 16275799
Alignment:
Q  367 atataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  16275875 atataacatgtttttctaaaataaatcaagtgtgattgaagtattatatggttgtttatcatgttaataagttaact 16275799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 378 - 443
Target Start/End: Complemental strand, 9312630 - 9312565
Alignment:
Q  378 ttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  9312630 ttttctaaaataaattaagtgtgatttgagtattatatgattgtttatcatgttaatatgttaact 9312565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 355 - 440
Target Start/End: Original strand, 46204948 - 46205033
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgtta 440  Q
    |||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||| ||| |||||||||||    
T  46204948 aaattatgaactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcatttaacatattaatatgtta 46205033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 355 - 443
Target Start/End: Complemental strand, 220579 - 220491
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||||||| ||| ||||||||||||||||||| |||| |||||||||| ||||| |||||||||| |||||||||||||||||    
T  220579 aaattacggactatgtaacatgtttttctaaaataaatcaagtatgattgaagtgttataagattgtttattatgttaatatgttaact 220491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 355 - 443
Target Start/End: Complemental strand, 41040132 - 41040044
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||| || |||| ||| |||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  41040132 aaattacggattagataacatgattttttaaaataaagtaagcgtgattgaagtattatatgattgtttatcatgttaatatgttaact 41040044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 365 - 443
Target Start/End: Complemental strand, 2387932 - 2387854
Alignment:
Q  365 ctatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||| ||| ||||||    
T  2387932 ctatataacatgtttttctaaaataaattaagtgtgattaaattattatatgatcgtttatcatgttattattttaact 2387854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 377 - 443
Target Start/End: Original strand, 52185100 - 52185166
Alignment:
Q  377 tttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||    
T  52185100 tttttctaaaataaattaaatataattgaagtattatatgattgtttatcatgttaatatgttaact 52185166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 355 - 443
Target Start/End: Original strand, 52473977 - 52474065
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||| ||||||| ||||| || ||||||||||||  ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  52473977 aaattacggattatataacatgttattttaaaataaattacatgtgattgaagtattatatgactgtttatcatattaatatgttaact 52474065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 294 - 436
Target Start/End: Complemental strand, 28582751 - 28582610
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    |||||||||||| ||||| ||||||||||||||||||| |||||||||             |||||| |||| |||||| |||||||||||| ||||||     
T  28582751 ggtgtgtttggactgaggatttaggaggggaagggaggggagggttta-cttttcttttttaaattacggacgatataacatgtttttctaagataaatc 28582653  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatat 436  Q
    ||||||| |||||||||||||| || |||||| ||||||||||    
T  28582652 aagtgtggttgaagtattatattatcgtttattatgttaatat 28582610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 355 - 443
Target Start/End: Complemental strand, 30200273 - 30200182
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatga---ttgtttatcatgttaatatgttaact 443  Q
    |||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||| |||||||   |||||||| |||||||||||| ||||    
T  30200273 aaattacggactatataacatgtttttctaaaataaatcaagtgtgattaaagtactatatgatcgttgtttattatgttaatatgtaaact 30200182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 355 - 443
Target Start/End: Complemental strand, 37102331 - 37102243
Alignment:
Q  355 aaattagggactatataaaatgttttt-ctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||||||||||| |||||||| ||||||||||| ||||||| ||||||||||||||||| | |||| |||||||||||||||||    
T  37102331 aaattacggactatataacatgttttttctaaaataaatcaagtgtggttgaagtattatatgatcg-ttattatgttaatatgttaact 37102243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 364 - 443
Target Start/End: Complemental strand, 43005912 - 43005833
Alignment:
Q  364 actatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||| || ||||||||||||||||| | | ||||||||||||||||||||  |||||||| ||||||||||||||    
T  43005912 actatataacatatttttctaaaataaatttaatttgattgaagtattatatgatattttatcatattaatatgttaact 43005833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 389 - 443
Target Start/End: Original strand, 37807176 - 37807230
Alignment:
Q  389 aaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  37807176 aaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatattaact 37807230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 434
Target Start/End: Complemental strand, 51819296 - 51819228
Alignment:
Q  366 tatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaat 434  Q
    ||||||| || ||||| ||||||||||| |||||||||||||||||||| ||| |||||||||||||||    
T  51819296 tatataatatatttttttaaaataaatttagtgtgattgaagtattatacgatcgtttatcatgttaat 51819228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 377 - 432
Target Start/End: Complemental strand, 40464031 - 40463976
Alignment:
Q  377 tttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtta 432  Q
    |||||||||||||||||||||| ||||||| | |||||||||||||||||||||||    
T  40464031 tttttctaaaataaattaagtgagattgaatttttatatgattgtttatcatgtta 40463976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 363 - 443
Target Start/End: Original strand, 46556213 - 46556295
Alignment:
Q  363 gactatataaaatgtttttctaaaataaattaagtgtgattgaagtat--tatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||| ||||||||| |||||||||| ||||||||||||||||  |||||||  |||| |||||||||||| ||||||    
T  46556213 gactatataatatgtttttccaaaataaattgagtgtgattgaagtattatatatgaccgtttgtcatgttaatatcttaact 46556295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 363 - 434
Target Start/End: Complemental strand, 54574535 - 54574464
Alignment:
Q  363 gactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaat 434  Q
    |||||||||| | ||||||||||||||||||||| |||||||||||||||||| |  ||||||||| |||||    
T  54574535 gactatataacacgtttttctaaaataaattaagcgtgattgaagtattatataaccgtttatcatattaat 54574464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 363 - 441
Target Start/End: Original strand, 651801 - 651879
Alignment:
Q  363 gactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    |||||||||| |||||||||||||||||||||||||||||| || ||||||| |||  ||| |||||||| ||| ||||    
T  651801 gactatataacatgtttttctaaaataaattaagtgtgattaaaatattatacgatcctttgtcatgttattattttaa 651879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 355 - 417
Target Start/End: Complemental strand, 10748479 - 10748417
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatga 417  Q
    |||||| ||| ||||||| |||||||||||||||||||||||||||||  |||||||||||||    
T  10748479 aaattacggagtatataacatgtttttctaaaataaattaagtgtgataaaagtattatatga 10748417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 389 - 443
Target Start/End: Complemental strand, 13083010 - 13082956
Alignment:
Q  389 aaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||| |||||| |||||||||||||||||| |||||| |||||||||||||||||    
T  13083010 aaatgaagtgtaattgaagtattatatgatcgtttattatgttaatatgttaact 13082956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 431
Target Start/End: Complemental strand, 16884138 - 16884077
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||||| ||| |||||||||||||||||  |||||||||||||||||  |||||||||||    
T  16884138 taaaatgtctttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 16884077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 27541937 - 27541978
Alignment:
Q  298 tgtttggattgagggtttaggaggggaagggaggagagggtt 339  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  27541937 tgtttggattgagggtttaggaggggaagggaggagatggtt 27541978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 40858642 - 40858703
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||||||||| ||||||||||| |||||  |||||||||||||||||  |||||||||||    
T  40858642 taaaatgtttttttaaaataaatttagtgtttttgaagtattatatgatcatttatcatgtt 40858703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 10943780 - 10943720
Alignment:
Q  371 aaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    ||||||||||| |||||||||||||||||  |||||||||||||| ||| ||||| |||||    
T  10943780 aaaatgtttttttaaaataaattaagtgtttttgaagtattatataattatttattatgtt 10943720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 441
Target Start/End: Original strand, 12790444 - 12790520
Alignment:
Q  365 ctatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    |||||||| ||||||||||| |||||||||||||| || |||||| ||||||||  || ||||||||| ||| ||||    
T  12790444 ctatataacatgtttttctataataaattaagtgtaatcgaagtaatatatgatctttcatcatgttattattttaa 12790520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 432
Target Start/End: Complemental strand, 47989133 - 47989070
Alignment:
Q  368 tataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtta 432  Q
    |||||||||||||| ||||||||||||| ||||||||||| ||||||  ||| ||||||||||||    
T  47989133 tataaaatgttttt-taaaataaattaaatgtgattgaagcattataaaattatttatcatgtta 47989070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 432
Target Start/End: Complemental strand, 47998420 - 47998357
Alignment:
Q  368 tataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtta 432  Q
    |||||||||||||| ||||||||||||| ||||||||||| ||||||  ||| ||||||||||||    
T  47998420 tataaaatgttttt-taaaataaattaaatgtgattgaagcattataaaattatttatcatgtta 47998357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 432
Target Start/End: Complemental strand, 48007707 - 48007644
Alignment:
Q  368 tataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtta 432  Q
    |||||||||||||| ||||||||||||| ||||||||||| ||||||  ||| ||||||||||||    
T  48007707 tataaaatgttttt-taaaataaattaaatgtgattgaagcattataaaattatttatcatgtta 48007644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 435
Target Start/End: Original strand, 55327432 - 55327512
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaata 435  Q
    |||||| |||||| |||| ||| |||||| |||||||| || ||||||||||| |||||||| | |||||| |||||||||    
T  55327432 aaattacggactacataacatgcttttcttaaataaatcaaatgtgattgaagcattatatgttcgtttattatgttaata 55327512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 342
Target Start/End: Complemental strand, 6803442 - 6803395
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggaggagagggtttaa 342  Q
    ||||||||||||||| |||||||||||||||| |||||||| ||||||    
T  6803442 gtgtgtttggattgaaggtttaggaggggaagagaggagagagtttaa 6803395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 337
Target Start/End: Complemental strand, 34641232 - 34641189
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagaggg 337  Q
    ||||||||||||| |||||||||||||||||||||||| |||||    
T  34641232 ggtgtgtttggatggagggtttaggaggggaagggaggggaggg 34641189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 341
Target Start/End: Original strand, 41110323 - 41110370
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||||||| |||| |||||||||||||||||||||| ||||||    
T  41110323 ggtgtgtttggatggaggatttaggaggggaagggaggagaaggttta 41110370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 431
Target Start/End: Complemental strand, 45663324 - 45663250
Alignment:
Q  356 aattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    ||||| |||| ||||||||| ||||| ||||||||||||  |||||||||||||||||| |||  |||||||||||    
T  45663324 aattacggacaatataaaatattttt-taaaataaattatatgtgattgaagtattataagatcatttatcatgtt 45663250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 368 - 431
Target Start/End: Complemental strand, 54996848 - 54996786
Alignment:
Q  368 tataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||||||||| | |||||| ||| |||||||||||||||||||||||||  |||||||||||    
T  54996848 tataaaatgtttat-taaaatgaatgaagtgtgattgaagtattatatgatcatttatcatgtt 54996786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 331
Target Start/End: Complemental strand, 55428619 - 55428584
Alignment:
Q  296 tgtgtttggattgagggtttaggaggggaagggagg 331  Q
    ||||||||||||||||||||||||||||||||||||    
T  55428619 tgtgtttggattgagggtttaggaggggaagggagg 55428584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 26135874 - 26135932
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcat 428  Q
    ||||||||||||  ||||||||||||||||  |||||||||||||| ||| ||||||||    
T  26135874 taaaatgttttttaaaaataaattaagtgtttttgaagtattatataattatttatcat 26135932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 431
Target Start/End: Original strand, 44412445 - 44412499
Alignment:
Q  377 tttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    ||||| |||||||||||||||||  |||||||||||||||||  |||||||||||    
T  44412445 tttttttaaaataaattaagtgtttttgaagtattatatgatgatttatcatgtt 44412499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 49815497 - 49815546
Alignment:
Q  368 tataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgat 418  Q
    ||||||||||||||  ||||||||||||| |||||||||||||||||||||    
T  49815497 tataaaatgttttta-aaaataaattaagcgtgattgaagtattatatgat 49815546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 341
Target Start/End: Original strand, 10748299 - 10748344
Alignment:
Q  296 tgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||||| ||||||||||||||||||||||| |||| |||||    
T  10748299 tgtgtttggatggagggtttaggaggggaagggagaagagagttta 10748344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 370 - 431
Target Start/End: Complemental strand, 21090238 - 21090177
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||| ||||| |||||||||||||||||  |||||||||||||||||  | |||||||||    
T  21090238 taaaatatttttttaaaataaattaagtgtttttgaagtattatatgataatatatcatgtt 21090177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 336
Target Start/End: Complemental strand, 21090312 - 21090271
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggaggagagg 336  Q
    ||||||||||||||| |||||||||| |||||||||||||||    
T  21090312 gtgtgtttggattgatggtttaggagaggaagggaggagagg 21090271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 24253723 - 24253760
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  24253723 ggtgtgtttggattgagggtttaggagggaaagggagg 24253760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 406
Target Start/End: Original strand, 31684362 - 31684399
Alignment:
Q  369 ataaaatgtttttctaaaataaattaagtgtgattgaa 406  Q
    |||| |||||||||||||||||||||||||||||||||    
T  31684362 ataacatgtttttctaaaataaattaagtgtgattgaa 31684399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 431
Target Start/End: Original strand, 34641077 - 34641130
Alignment:
Q  378 ttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||| |||||||||||||||||  |||||||||||||||||  |||||||||||    
T  34641077 ttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 34641130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 327
Target Start/End: Complemental strand, 37102381 - 37102348
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagg 327  Q
    ||||||||||||||||||||||||||||||||||    
T  37102381 ggtgtgtttggattgagggtttaggaggggaagg 37102348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 432
Target Start/End: Original strand, 37237001 - 37237061
Alignment:
Q  371 aaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtta 432  Q
    |||||||||||  |||||||||||||||||||||||||| || |||||  ||||||||||||    
T  37237001 aaaatgtttttg-aaaataaattaagtgtgattgaagtactaaatgatcatttatcatgtta 37237061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 41414155 - 41414216
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||||||||| |||||||||| ||| ||  |||||||||||||||||  |||||||||||    
T  41414155 taaaatgtttttttaaaataaatcaagcgtttttgaagtattatatgatcatttatcatgtt 41414216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 428
Target Start/End: Complemental strand, 42699782 - 42699721
Alignment:
Q  367 atataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcat 428  Q
    ||||||||| |||||  ||||||||||||||||  |||||||||||||||||  ||||||||    
T  42699782 atataaaatatttttaaaaaataaattaagtgtttttgaagtattatatgatcatttatcat 42699721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 46978504 - 46978565
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||||||||| ||||||||||||| |||  |||||||||||||| ||  |||||||||||    
T  46978504 taaaatgtttttttaaaataaattaaatgtttttgaagtattatataatcatttatcatgtt 46978565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 370 - 427
Target Start/End: Original strand, 48683689 - 48683746
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatca 427  Q
    |||||||||||| |||||||||||||||||  ||||| |||||||||||  |||||||    
T  48683689 taaaatgtttttttaaaataaattaagtgtttttgaaatattatatgatcatttatca 48683746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 8432425 - 8432365
Alignment:
Q  371 aaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    ||||||||||| |||||| ||||||||||  |||||||||||||  ||| |||||||||||    
T  8432425 aaaatgtttttttaaaatgaattaagtgtttttgaagtattataaaattatttatcatgtt 8432365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 42772044 - 42772088
Alignment:
Q  292 aaggtgtgtttggattgagggtttaggaggggaagggaggagagg 336  Q
    |||||||||||||||||| |||||| |||||||||||||| ||||    
T  42772044 aaggtgtgtttggattgaaggtttaagaggggaagggaggggagg 42772088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 341
Target Start/End: Original strand, 5903551 - 5903598
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    |||||||||||||||||| |||| |||||||||| ||| |||||||||    
T  5903551 ggtgtgtttggattgaggatttaagaggggaaggcaggggagggttta 5903598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 331
Target Start/End: Complemental strand, 17474446 - 17474411
Alignment:
Q  296 tgtgtttggattgagggtttaggaggggaagggagg 331  Q
    ||||||||||||||||||| ||||||||||||||||    
T  17474446 tgtgtttggattgagggttgaggaggggaagggagg 17474411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 331
Target Start/End: Original strand, 31664391 - 31664426
Alignment:
Q  296 tgtgtttggattgagggtttaggaggggaagggagg 331  Q
    ||||||||||||||||||||| ||||||||||||||    
T  31664391 tgtgtttggattgagggtttaagaggggaagggagg 31664426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 331
Target Start/End: Complemental strand, 31932005 - 31931970
Alignment:
Q  296 tgtgtttggattgagggtttaggaggggaagggagg 331  Q
    ||||||||||||||||||||| ||||||||||||||    
T  31932005 tgtgtttggattgagggtttaagaggggaagggagg 31931970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 42772123 - 42772170
Alignment:
Q  384 aaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    ||||||||||||||||  |||||||||||||||||  |||||||||||    
T  42772123 aaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 42772170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 329
Target Start/End: Complemental strand, 54574598 - 54574563
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaaggga 329  Q
    |||||||||||||||||||||||||| |||||||||    
T  54574598 ggtgtgtttggattgagggtttaggaagggaaggga 54574563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 328
Target Start/End: Original strand, 651742 - 651776
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaaggg 328  Q
    |||||||||||||||||||||||||||||| ||||    
T  651742 ggtgtgtttggattgagggtttaggagggggaggg 651776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 330
Target Start/End: Original strand, 14897895 - 14897933
Alignment:
Q  292 aaggtgtgtttggattgagggtttaggaggggaagggag 330  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  14897895 aaggtgtttttggattgagagtttaggaggggaagggag 14897933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 17474373 - 17474315
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcat 428  Q
    |||||| |||||  ||||||||||||||||  |||||||||||| ||||| ||||||||    
T  17474373 taaaatattttttaaaaataaattaagtgtttttgaagtattatttgattatttatcat 17474315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 28581189 - 28581235
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    |||||||||||| |||||||||| || |||||||||| |||||||||    
T  28581189 gtgtgtttggatggagggtttagaagaggaagggaggggagggttta 28581235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 324
Target Start/End: Original strand, 34641004 - 34641034
Alignment:
Q  294 ggtgtgtttggattgagggtttaggagggga 324  Q
    |||||||||||||||||||||||||||||||    
T  34641004 ggtgtgtttggattgagggtttaggagggga 34641034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 336
Target Start/End: Original strand, 44412363 - 44412405
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagg 336  Q
    |||||||||| |||||||||||||||||||||| |||| ||||    
T  44412363 ggtgtgtttgaattgagggtttaggaggggaagagaggggagg 44412405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 330
Target Start/End: Original strand, 14897981 - 14898014
Alignment:
Q  297 gtgtttggattgagggtttaggaggggaagggag 330  Q
    |||||||||||||| |||||||||||||||||||    
T  14897981 gtgtttggattgagagtttaggaggggaagggag 14898014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 24253964 - 24253927
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  24253964 ggtgtgtttggatggagggtttagaaggggaagggagg 24253927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 341
Target Start/End: Complemental strand, 26136041 - 26135992
Alignment:
Q  292 aaggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    |||||||| ||| || |||||||||||||||||||||||  |||||||||    
T  26136041 aaggtgtgattgaatggagggtttaggaggggaagggagtggagggttta 26135992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 406
Target Start/End: Complemental strand, 31894056 - 31894019
Alignment:
Q  369 ataaaatgtttttctaaaataaattaagtgtgattgaa 406  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  31894056 ataacatgtttttctaaaataaattaaatgtgattgaa 31894019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 36727254 - 36727314
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    ||||||||| || |||||||||| ||||||  |||||||||||||||||  |||||||||||    
T  36727254 taaaatgttcttttaaaataaat-aagtgtttttgaagtattatatgataatttatcatgtt 36727314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 330
Target Start/End: Complemental strand, 41110563 - 41110527
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggag 330  Q
    ||||||||||||||||||||||  |||||||||||||    
T  41110563 ggtgtgtttggattgagggtttgtgaggggaagggag 41110527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 44412605 - 44412561
Alignment:
Q  292 aaggtgtgtttggattgagggtttaggaggggaagggaggagagg 336  Q
    |||||||||||||||||| |||||  |||||||||||||| ||||    
T  44412605 aaggtgtgtttggattgatggtttgtgaggggaagggaggggagg 44412561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 324
Target Start/End: Original strand, 46978441 - 46978469
Alignment:
Q  296 tgtgtttggattgagggtttaggagggga 324  Q
    |||||||||||||||||||||||||||||    
T  46978441 tgtgtttggattgagggtttaggagggga 46978469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 362 - 442
Target Start/End: Complemental strand, 16471 - 16391
Alignment:
Q  362 ggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaac 442  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16471 ggactatataacatgtttgtctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaac 16391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 8e-31; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 355 - 443
Target Start/End: Original strand, 33236013 - 33236101
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||||||||||| |||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  33236013 aaattacggactatataacatgtttttctaaaataaattaagactgattgaagaattatatgattgtttatcatgttaatatgttaact 33236101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 295 - 436
Target Start/End: Complemental strand, 19278278 - 19278139
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatta 394  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||             |||||| ||||||||||| ||||||||||||||||||||     
T  19278278 gtgtgtttggattgagagtttaggaggggaagggaggggagggttta--ttttcttttttaaattacggactatataacatgtttttctaaaataaattt 19278181  T
Q  395 agtgtgattgaagtattatatgattgtttatcatgttaatat 436  Q
    ||| |||||||||||| ||||||| |||||||||||||||||    
T  19278180 agtctgattgaagtatcatatgatcgtttatcatgttaatat 19278139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 295 - 439
Target Start/End: Complemental strand, 30487546 - 30487403
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatta 394  Q
    |||||||| |||||||||||||||||||||||||||  |||||||||             ||| || ||||||||||| |||||||| |||||||||| |    
T  30487546 gtgtgtttcgattgagggtttaggaggggaagggagtggagggttta-gttttattttttaaactacggactatataacatgtttttataaaataaatca 30487448  T
Q  395 agtgtgattgaagtattatatgattgtttatcatgttaatatgtt 439  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  30487447 agtgtgattgaagtattatattattgtttatcatgttaatatgtt 30487403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 294 - 433
Target Start/End: Complemental strand, 12811222 - 12811085
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    |||||||||||||||||||||||||| |||||| |||| ||||| |||             ||||||| |||||||||| ||||||||||||||||||||    
T  12811222 ggtgtgtttggattgagggtttaggatgggaagagaggggagggatta-cttttcttctttaaattagagactatataatatgtttttctaaaataaatt 12811124  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaa 433  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  12811123 aagtgtgattgaagta-gatatgattgtttatcatgttaa 12811085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 377 - 443
Target Start/End: Complemental strand, 4097672 - 4097606
Alignment:
Q  377 tttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4097672 tttttccaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaact 4097606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 363 - 441
Target Start/End: Original strand, 31849180 - 31849258
Alignment:
Q  363 gactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    |||||||||| || |||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||    
T  31849180 gactatataacatatttttctaaaataaatcaagtgtgattgaagtattatattattgtttatcacgttaatatgttaa 31849258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 355 - 440
Target Start/End: Complemental strand, 5585484 - 5585399
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgtta 440  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||| ||| || |||||| ||||||||||||||    
T  5585484 aaattacggactatataacatgtttttctaaaataaattaagtgtgattgaaatattgtataatcgtttattatgttaatatgtta 5585399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 355 - 443
Target Start/End: Original strand, 34176397 - 34176485
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||| ||||||| ||||||||||||||||||| ||||||||||| ||||||||| ||| |||||| |||||||||||||||||    
T  34176397 aaattacggattatataacatgtttttctaaaataaatcaagtgtgattgcagtattatacgatcgtttattatgttaatatgttaact 34176485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 362 - 441
Target Start/End: Complemental strand, 2892778 - 2892699
Alignment:
Q  362 ggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    ||||||||||| | |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  2892778 ggactatataacacgtttttctaaaataaatttagtgtgattgaaatattatatgattgtttatcatgttattattttaa 2892699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 364 - 443
Target Start/End: Complemental strand, 21607017 - 21606938
Alignment:
Q  364 actatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||| | ||||||||||||||||||| |||||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  21607017 actatattatatgtttttctaaaataaataaagtgtgactgaagtattatacgatcgtttatcatgttaatatgttaact 21606938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 294 - 443
Target Start/End: Original strand, 14515475 - 14515621
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||              |||||| |||||| ||||  ||||| |||||||||||||    
T  14515475 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttg-tttttcttttttaaattacggactagataa--tgtttctctaaaataaatt 14515571  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||| ||||||||||||| ||  ||||||||||| |||||||||||    
T  14515572 aagtgtgaatgaagtattatattatcatttatcatgttcatatgttaact 14515621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 355 - 443
Target Start/End: Original strand, 1300681 - 1300770
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaa-ataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||| ||||||| || ||||| | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1300681 aaattacggattatataacatatttttttcaagataaattaagtgtgattgaagtattatatgattgtttatcaggttaatatgttaact 1300770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 294 - 443
Target Start/End: Complemental strand, 9719272 - 9719125
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    ||||||||||||||||||||||| ||||||||| |||| | ||||||||            |||||  ||||||||||| ||| |||| |||| ||||||    
T  9719272 ggtgtgtttggattgagggtttatgaggggaagagaggggtgggtttaattttctttttt-aaattccggactatataacatgctttt-taaattaaatt 9719175  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
     |||||||||||||||||||||||||||||||||  ||||||||||||||    
T  9719174 tagtgtgattgaagtattatatgattgtttatcaaattaatatgttaact 9719125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 366 - 441
Target Start/End: Original strand, 13583792 - 13583867
Alignment:
Q  366 tatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||  ||||| ||||||| |||||||    
T  13583792 tatataacatgtttttctaaaataaattaagtgtgattgaaatattatatgatcatttattatgttaacatgttaa 13583867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 443
Target Start/End: Original strand, 25741476 - 25741557
Alignment:
Q  362 ggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||| |||||||| |||||||||||||| |||| |||||| ||||||||| ||||||||| ||| ||||||||||    
T  25741476 ggactatataacatgtttttttaaaataaattaagcgtgactgaagttttatatgatcgtttatcatattattatgttaact 25741557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 366 - 441
Target Start/End: Complemental strand, 16738167 - 16738092
Alignment:
Q  366 tatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    |||||||||||||||||||||||||| ||||||| ||| |||||||||||||| || |||||||||| ||| ||||    
T  16738167 tatataaaatgtttttctaaaataaagtaagtgttatttaagtattatatgatcgtatatcatgttattattttaa 16738092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 355 - 443
Target Start/End: Original strand, 1390381 - 1390469
Alignment:
Q  355 aaattagggactatataaaatgttt-ttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||||||| ||| |||||| |||||||||||||||||| |||||||| |||||| ||||  |||||||||||||||||||||||    
T  1390381 aaattacggactatgtaacatgtttattctaaaataaattaagtttgattgaaatattat-tgatcatttatcatgttaatatgttaact 1390469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 362 - 443
Target Start/End: Complemental strand, 9721312 - 9721232
Alignment:
Q  362 ggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||| |||||| |||||||| |||| |||| | |||||||||||||||||||||||||||||||||  ||||||||||||||    
T  9721312 ggaccatataacatgttttt-taaattaaagttagtgtgattgaagtattatatgattgtttatcaaattaatatgttaact 9721232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 363 - 415
Target Start/End: Original strand, 2893700 - 2893752
Alignment:
Q  363 gactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatat 415  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  2893700 gactatataacatgtttttctaaaataaattaagtgtgattgatgtattatat 2893752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 443
Target Start/End: Complemental strand, 10348981 - 10348892
Alignment:
Q  355 aaattagggactatataaaatgtttttct-aaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| ||||||||||| |||||||| | ||||||| | ||||| |||||||||||||||| || ||||||| | ||||||||||||||    
T  10348981 aaattacggactatataacatgttttttttaaaataattcaagtgcgattgaagtattatattatcgtttatcgtattaatatgttaact 10348892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 15323227 - 15323268
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagag 335  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  15323227 ggtgtgtttggattgagggtttaggaggggaagggaggagag 15323268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 15353366 - 15353407
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagag 335  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  15353366 ggtgtgtttggattgagggtttaggaggggaagggaggagag 15353407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 367 - 431
Target Start/End: Original strand, 26318379 - 26318443
Alignment:
Q  367 atataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||||||||   ||||||||||    
T  26318379 atataaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcaattatcatgtt 26318443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 32926716 - 32926784
Alignment:
Q  364 actatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtta 432  Q
    |||||| ||||| | ||| | ||||||||||||||||||||||||||||||||||  ||||||||||||    
T  32926716 actataaaaaatatattttttaaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 32926784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 443
Target Start/End: Original strand, 2900017 - 2900060
Alignment:
Q  400 gattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  2900017 gattgatgtattatatgattgtttatcatgttaatatgttaact 2900060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 341
Target Start/End: Original strand, 9721140 - 9721187
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||    
T  9721140 ggtgtgtttggattgaaggtttaggaggggaagggaggggagggttta 9721187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 441
Target Start/End: Complemental strand, 30850083 - 30850008
Alignment:
Q  366 tatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    ||||||| |||||||| ||||| ||||| ||| | |||||||||||||||||| ||||||||||||| ||| ||||    
T  30850083 tatataatatgtttttttaaaacaaatttagtataattgaagtattatatgatcgtttatcatgttattattttaa 30850008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 383 - 441
Target Start/End: Complemental strand, 665995 - 665937
Alignment:
Q  383 taaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    ||||| |||||||||||| |||||||||||||| ||  |||||||||||||||||||||    
T  665995 taaaaaaaattaagtgtggttgaagtattatatcatcatttatcatgttaatatgttaa 665937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 441
Target Start/End: Original strand, 1395698 - 1395784
Alignment:
Q  356 aattagggactatataaaatgtttttc-taaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    ||||| ||||||| ||| ||||||||  |||||||||||||||||||||||| || || |||||  ||||||||| |||||||||||    
T  1395698 aattacggactatgtaacatgttttttataaaataaattaagtgtgattgaaataatacatgatcatttatcatgctaatatgttaa 1395784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 9719034 - 9719080
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  9719034 gtgtgtttggattgagggtttaggaggggaagggaggggaggattta 9719080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 6034246 - 6034201
Alignment:
Q  363 gactatataaaatgtttttctaaaataaattaagtgtgattgaagt 408  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||    
T  6034246 gactgtataacatgtttttctaaaataaattaagtgtgattgaagt 6034201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 10818231 - 10818268
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10818231 ggtgtgtttggattgagggtttaggaggggaagggagg 10818268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 392 - 441
Target Start/End: Original strand, 10818315 - 10818364
Alignment:
Q  392 ttaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
    |||| ||||||||||||||||||||||  |||||||||||||||||||||    
T  10818315 ttaaatgtgattgaagtattatatgatcatttatcatgttaatatgttaa 10818364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 355 - 432
Target Start/End: Complemental strand, 14548788 - 14548711
Alignment:
Q  355 aaattagggactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtta 432  Q
    |||||| |||| |||||||||||| || ||||||||||||| ||||||||||  ||||||||||  ||||| ||||||    
T  14548788 aaattacggacaatataaaatgttattttaaaataaattaactgtgattgaaccattatatgatcatttataatgtta 14548711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 30487308 - 30487353
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtt 339  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||    
T  30487308 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtt 30487353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 341
Target Start/End: Complemental strand, 10818458 - 10818411
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||||||||||| |||||||||||| ||||||| |||||||||    
T  10818458 ggtgtgtttggattgagagtttaggaggggtagggaggggagggttta 10818411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 23090997 - 23091040
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagaggg 337  Q
    |||||||||||||||| ||||||||||||||||||||| |||||    
T  23090997 ggtgtgtttggattgaaggtttaggaggggaagggaggggaggg 23091040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 385 - 432
Target Start/End: Original strand, 32922437 - 32922484
Alignment:
Q  385 aaataaattaagtgtgattgaagtattatatgattgtttatcatgtta 432  Q
    ||||| |||||||||||| |||||||||||||||| ||||||||||||    
T  32922437 aaatatattaagtgtgatcgaagtattatatgattatttatcatgtta 32922484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 363 - 443
Target Start/End: Original strand, 33041540 - 33041612
Alignment:
Q  363 gactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||  ||||||| |||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  33041540 gactatataatgtgtttttttaaaataaattaagtgtgattgaagtgtta--------tttatcatgttaatatgttaact 33041612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 16509356 - 16509405
Alignment:
Q  368 tataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgat 418  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||||||||    
T  16509356 tataaaatgttttta-aaaataaatcaagtgtgattgaagtattatatgat 16509405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 31849113 - 31849159
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||||    
T  31849113 gtgtgttaggattgagggtttaagaggggaagggaggggagggttta 31849159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 395 - 432
Target Start/End: Complemental strand, 2892985 - 2892948
Alignment:
Q  395 agtgtgattgaagtattatatgattgtttatcatgtta 432  Q
    |||||||||||||||||||||||| |||||||||||||    
T  2892985 agtgtgattgaagtattatatgatcgtttatcatgtta 2892948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 327
Target Start/End: Original strand, 4097237 - 4097270
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagg 327  Q
    ||||||||||||||||||||||||||||||||||    
T  4097237 ggtgtgtttggattgagggtttaggaggggaagg 4097270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 9051774 - 9051737
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  9051774 ggtgtgtttggattgagggtttaagaggggaagggagg 9051737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 363 - 443
Target Start/End: Original strand, 25747403 - 25747484
Alignment:
Q  363 gactatataaaatgtttttct-aaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||| |||||||| | ||||| ||||||  |||| |||||| ||||||||| ||||||||||||| ||| ||||||    
T  25747403 gactatataacatgttttttttaaaatcaattaaacgtgactgaagttttatatgatcgtttatcatgttattatattaact 25747484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 331
Target Start/End: Complemental strand, 4097754 - 4097718
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    |||||||||||||||||||||| ||||||||||||||    
T  4097754 gtgtgtttggattgagggtttaagaggggaagggagg 4097718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 19278039 - 19278083
Alignment:
Q  297 gtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    |||||||||| |||||||||||||||||||| ||||||| |||||    
T  19278039 gtgtttggatggagggtttaggaggggaaggaaggagagagttta 19278083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 413
Target Start/End: Complemental strand, 383021 - 382978
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattat 413  Q
    |||||||||||| |||||||||||||||||  ||||||||||||    
T  383021 taaaatgtttttttaaaataaattaagtgtttttgaagtattat 382978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 431
Target Start/End: Original strand, 3023607 - 3023650
Alignment:
Q  388 taaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||||||||||| |||| |||||||||||| |||||||||||    
T  3023607 taaattaagtgtgaatgaaatattatatgattatttatcatgtt 3023650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 341
Target Start/End: Complemental strand, 14515713 - 14515666
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||||||| |||||||||||||||||||| | | |||||||||    
T  14515713 ggtgtgtttggatggagggtttaggaggggaaggaaagggagggttta 14515666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 330
Target Start/End: Complemental strand, 21607085 - 21607050
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggag 330  Q
    |||||||||||||||||||||||||||||||| |||    
T  21607085 gtgtgtttggattgagggtttaggaggggaagagag 21607050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 443
Target Start/End: Complemental strand, 29490548 - 29490489
Alignment:
Q  384 aaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||| ||||||| |||||| ||||||||||||||  |||||| |||||||| |||||||    
T  29490548 aaaatcaattaagcgtgatttaagtattatatgatattttatcttgttaatacgttaact 29490489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 324
Target Start/End: Original strand, 1300631 - 1300661
Alignment:
Q  294 ggtgtgtttggattgagggtttaggagggga 324  Q
    |||||||||||||||||||||||||||||||    
T  1300631 ggtgtgtttggattgagggtttaggagggga 1300661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 415
Target Start/End: Complemental strand, 5381343 - 5381305
Alignment:
Q  377 tttttctaaaataaattaagtgtgattgaagtattatat 415  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  5381343 tttttttaaaataaattaagcgtgattgaagtattatat 5381305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 665843 - 665887
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtt 339  Q
    ||||||||||||| ||||||||||||||||||| |||| |||||||    
T  665843 ggtgtgtttggat-gagggtttaggaggggaagtgaggggagggtt 665887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 333
Target Start/End: Complemental strand, 1390563 - 1390522
Alignment:
Q  292 aaggtgtgtttggattgagggtttaggaggggaagggaggag 333  Q
    |||||||||||||||  ||||||||||||||||| |||||||    
T  1390563 aaggtgtgtttggatgaagggtttaggaggggaatggaggag 1390522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Original strand, 17155446 - 17155495
Alignment:
Q  383 taaaataaattaagtgtgattgaagtattatatgattgtttatcatgtta 432  Q
    |||||| |||||||||||||| ||||||||||||||   |||||||||||    
T  17155446 taaaatcaattaagtgtgatttaagtattatatgatcagttatcatgtta 17155495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 23091195 - 23091158
Alignment:
Q  300 tttggattgagggtttaggaggggaagggaggagaggg 337  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  23091195 tttggatggagggtttaggaggggaagggaggggaggg 23091158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 415
Target Start/End: Complemental strand, 25468562 - 25468521
Alignment:
Q  374 atgtttttctaaaataaattaagtgtgattgaagtattatat 415  Q
    |||||||| |||||||||||||||||  ||||||||||||||    
T  25468562 atgtttttttaaaataaattaagtgtttttgaagtattatat 25468521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 327
Target Start/End: Original strand, 5585304 - 5585336
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagg 327  Q
    |||||||||||| ||||||||||||||||||||    
T  5585304 gtgtgtttggatggagggtttaggaggggaagg 5585336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 334
Target Start/End: Original strand, 31798920 - 31798960
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggaga 334  Q
    ||||||||||||||||||||||||||||  ||| |||||||    
T  31798920 ggtgtgtttggattgagggtttaggaggataagagaggaga 31798960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 294 - 443
Target Start/End: Complemental strand, 39432 - 39281
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    |||||||||||||||||||||||| |||| |||||||| |||||||||             |||||| ||||||| ||| ||||||||||||||||||||    
T  39432 ggtgtgtttggattgagggtttagaagggaaagggaggggagggttta-cttttcttttttaaattacggactatgtaacatgtttttctaaaataaatt 39334  T
Q  394 aagtgtgatt---gaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    ||||||||||   |||||||||||||||  |||||||||||||||||||||||    
T  39333 aagtgtgattgaagaagtattatatgatcatttatcatgttaatatgttaact 39281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 369 - 439
Target Start/End: Original strand, 15339 - 15409
Alignment:
Q  369 ataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgtt 439  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  15339 ataacatgtttttctaaaataaattaagtgtggttgaagtattatatgattgtttatcacgttaatatgtt 15409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 363 - 443
Target Start/End: Original strand, 16020 - 16100
Alignment:
Q  363 gactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||| |||||||| ||||| |||||| |||||||||||||||| ||| ||||||| |||| ||||||||||||||    
T  16020 gactatataacatgtttttttaaaaaaaattatgtgtgattgaagtattttataattgtttttcatattaatatgttaact 16100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 294 - 441
Target Start/End: Original strand, 6586 - 6731
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggaggagagggtttaannnnnnnnnnnnaaattagggactatataaaatgtttttctaaaataaatt 393  Q
    |||||||||||||||| | ||||||||| ||||||||| |||||||||             ||||||  ||||||||||  |||| ||||||||||||||    
T  6586 ggtgtgtttggattgaagttttaggaggagaagggaggggagggttta-cttttcttttttaaattacagactatataacttgttattctaaaataaatt 6684  T
Q  394 aagtgtgattgaagtattatatgattgtttatcatgttaatatgttaa 441  Q
     |||||||||||||||||||||||| |||||| |||||||||| ||||    
T  6685 tagtgtgattgaagtattatatgatcgtttat-atgttaatattttaa 6731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 363 - 443
Target Start/End: Original strand, 18840 - 18919
Alignment:
Q  363 gactatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaact 443  Q
    |||||||||| |||| |||||||||||||||| |||| |||||| |||||||||| | |||||||||||||||| ||||||    
T  18840 gactatataacatgtctttctaaaataaattatgtgtcattgaattattatatga-tctttatcatgttaatatattaact 18919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 366 - 428
Target Start/End: Complemental strand, 69378 - 69316
Alignment:
Q  366 tatataaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcat 428  Q
    |||||||||||||||| |||||||||||||| ||||  |||||||||||||||  ||||||||    
T  69378 tatataaaatgtttttttaaaataaattaagggtgacagaagtattatatgatcatttatcat 69316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 3150 - 3196
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||    
T  3150 gtgtgtttggattgagagtttaggaggggaagggaggggagagttta 3196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 1175 - 1221
Alignment:
Q  295 gtgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    |||||||||||||||||||||||||||||||| |||| ||| |||||    
T  1175 gtgtgtttggattgagggtttaggaggggaagagaggggagagttta 1221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 432
Target Start/End: Complemental strand, 81564 - 81516
Alignment:
Q  384 aaaataaattaagtgtgattgaagtattatatgattgtttatcatgtta 432  Q
    ||||||||| |||| ||||||||||||||||||||  ||||||||||||    
T  81564 aaaataaatcaagtatgattgaagtattatatgatcatttatcatgtta 81516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 324
Target Start/End: Original strand, 184613 - 184643
Alignment:
Q  294 ggtgtgtttggattgagggtttaggagggga 324  Q
    |||||||||||||||||||||||||||||||    
T  184613 ggtgtgtttggattgagggtttaggagggga 184643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 341
Target Start/End: Complemental strand, 184847 - 184802
Alignment:
Q  296 tgtgtttggattgagggtttaggaggggaagggaggagagggttta 341  Q
    ||||||||||| ||||||||||||||| |||||| | |||||||||    
T  184847 tgtgtttggatggagggtttaggagggaaagggaagggagggttta 184802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 17780 - 17743
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaagggagg 331  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  17780 ggtgtgtttggatggagggtttaggagtggaagggagg 17743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 37460 - 37521
Alignment:
Q  370 taaaatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 431  Q
    |||||||||||| |||||||||| ||||||  ||||||| |||||||||   ||||||||||    
T  37460 taaaatgtttttttaaaataaatcaagtgtttttgaagtgttatatgatcacttatcatgtt 37521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0783 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0783
Description:

Target: scaffold0783; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 432
Target Start/End: Complemental strand, 6063 - 6015
Alignment:
Q  384 aaaataaattaagtgtgattgaagtattatatgattgtttatcatgtta 432  Q
    ||||||||| |||| ||||| ||||||||||||||  ||||||||||||    
T  6063 aaaataaatcaagtatgattcaagtattatatgatcatttatcatgtta 6015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 326
Target Start/End: Original strand, 52898 - 52930
Alignment:
Q  294 ggtgtgtttggattgagggtttaggaggggaag 326  Q
    |||||||||||||||||||||||||| ||||||    
T  52898 ggtgtgtttggattgagggtttaggatgggaag 52930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 320
Target Start/End: Original strand, 121985 - 122013
Alignment:
Q  292 aaggtgtgtttggattgagggtttaggag 320  Q
    |||||||||||||||||||||||||||||    
T  121985 aaggtgtgtttggattgagggtttaggag 122013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 432
Target Start/End: Complemental strand, 100693 - 100653
Alignment:
Q  392 ttaagtgtgattgaagtattatatgattgtttatcatgtta 432  Q
    ||||||||||||||| | |||||||||| ||||||||||||    
T  100693 ttaagtgtgattgaattgttatatgattatttatcatgtta 100653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University