View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11207_low_22 (Length: 431)

Name: NF11207_low_22
Description: NF11207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11207_low_22
NF11207_low_22
[»] chr3 (41 HSPs)
chr3 (33-400)||(1728979-1729367)
chr3 (266-412)||(19638499-19638645)
chr3 (86-124)||(18004338-18004376)
chr3 (86-125)||(507577-507616)
chr3 (86-125)||(1787278-1787317)
chr3 (86-125)||(3179296-3179335)
chr3 (86-125)||(4751110-4751149)
chr3 (86-125)||(5540428-5540467)
chr3 (86-125)||(5583040-5583079)
chr3 (277-336)||(5798564-5798623)
chr3 (86-125)||(5869103-5869142)
chr3 (86-125)||(6213468-6213507)
chr3 (86-125)||(6493753-6493792)
chr3 (86-125)||(9384068-9384107)
chr3 (86-125)||(10630355-10630394)
chr3 (86-125)||(11275792-11275831)
chr3 (86-125)||(12240966-12241005)
chr3 (86-125)||(12290387-12290426)
chr3 (86-125)||(13129062-13129101)
chr3 (86-125)||(13146525-13146564)
chr3 (86-125)||(13265065-13265104)
chr3 (86-125)||(13376075-13376114)
chr3 (86-125)||(13386669-13386708)
chr3 (86-125)||(14473012-14473051)
chr3 (78-125)||(15654507-15654554)
chr3 (86-125)||(16394454-16394493)
chr3 (86-125)||(17014575-17014614)
chr3 (86-125)||(17899514-17899553)
chr3 (277-336)||(18698198-18698257)
chr3 (86-125)||(19785813-19785852)
chr3 (86-125)||(20676604-20676643)
chr3 (86-125)||(23764685-23764724)
chr3 (86-125)||(24386925-24386964)
chr3 (86-125)||(24667261-24667300)
chr3 (86-125)||(28317645-28317684)
chr3 (86-125)||(29464613-29464652)
chr3 (86-125)||(37873852-37873891)
chr3 (86-125)||(37882370-37882409)
chr3 (86-125)||(38202043-38202082)
chr3 (86-125)||(39379475-39379514)
chr3 (86-125)||(41691040-41691079)
[»] chr8 (20 HSPs)
chr8 (257-418)||(18163042-18163203)
chr8 (360-415)||(17012329-17012384)
chr8 (360-415)||(17544817-17544872)
chr8 (360-415)||(45563795-45563850)
chr8 (86-125)||(249200-249239)
chr8 (86-125)||(812301-812340)
chr8 (86-125)||(3352077-3352116)
chr8 (86-125)||(6158458-6158497)
chr8 (86-125)||(13692012-13692051)
chr8 (86-125)||(16744064-16744103)
chr8 (86-125)||(19136072-19136111)
chr8 (86-125)||(19232170-19232209)
chr8 (86-125)||(19425717-19425756)
chr8 (86-125)||(30318147-30318186)
chr8 (86-125)||(32081138-32081177)
chr8 (86-125)||(36085313-36085352)
chr8 (86-125)||(36300318-36300357)
chr8 (86-125)||(44488506-44488545)
chr8 (87-125)||(23790034-23790072)
chr8 (87-125)||(23802081-23802119)
[»] chr7 (30 HSPs)
chr7 (277-406)||(16111062-16111191)
chr7 (266-414)||(16404666-16404814)
chr7 (225-394)||(24831717-24831886)
chr7 (274-395)||(27289348-27289469)
chr7 (360-415)||(13877021-13877076)
chr7 (86-125)||(4415497-4415536)
chr7 (277-416)||(14143438-14143577)
chr7 (354-415)||(16312710-16312771)
chr7 (366-415)||(16549220-16549269)
chr7 (366-415)||(16616393-16616442)
chr7 (86-125)||(174263-174302)
chr7 (86-125)||(460477-460516)
chr7 (86-125)||(1994929-1994968)
chr7 (86-125)||(2709104-2709143)
chr7 (86-125)||(4219381-4219420)
chr7 (86-125)||(6870721-6870760)
chr7 (86-125)||(8005557-8005596)
chr7 (86-125)||(8624718-8624757)
chr7 (86-125)||(9092607-9092646)
chr7 (86-125)||(9166955-9166994)
chr7 (86-125)||(9440636-9440675)
chr7 (86-125)||(11012560-11012599)
chr7 (86-125)||(17953605-17953644)
chr7 (86-125)||(20986630-20986669)
chr7 (86-125)||(24741474-24741513)
chr7 (86-125)||(26393585-26393624)
chr7 (86-125)||(26656826-26656865)
chr7 (86-125)||(40045595-40045634)
chr7 (86-125)||(42873221-42873260)
chr7 (354-415)||(33603681-33603742)
[»] scaffold0758 (1 HSPs)
scaffold0758 (258-406)||(1972-2120)
[»] chr4 (28 HSPs)
chr4 (78-418)||(24901753-24902095)
chr4 (277-415)||(39042502-39042640)
chr4 (255-413)||(11451368-11451526)
chr4 (265-415)||(17528451-17528601)
chr4 (360-415)||(15867203-15867258)
chr4 (255-336)||(11543209-11543290)
chr4 (357-413)||(17244463-17244519)
chr4 (86-125)||(3378907-3378946)
chr4 (86-125)||(4991206-4991245)
chr4 (86-125)||(5019541-5019580)
chr4 (86-125)||(10298076-10298115)
chr4 (86-125)||(10744009-10744048)
chr4 (86-125)||(10957778-10957817)
chr4 (86-125)||(14839468-14839507)
chr4 (86-125)||(15200214-15200253)
chr4 (86-125)||(16263270-16263309)
chr4 (86-125)||(16312517-16312556)
chr4 (86-125)||(17925503-17925542)
chr4 (86-125)||(18755901-18755940)
chr4 (86-125)||(19947806-19947845)
chr4 (86-125)||(22003822-22003861)
chr4 (86-125)||(24647736-24647775)
chr4 (86-125)||(27663978-27664017)
chr4 (86-125)||(27818357-27818396)
chr4 (86-125)||(30929904-30929943)
chr4 (86-125)||(36025696-36025735)
chr4 (86-125)||(49514941-49514980)
chr4 (86-125)||(55748663-55748702)
[»] scaffold0037 (1 HSPs)
scaffold0037 (264-415)||(74894-75045)
[»] chr2 (23 HSPs)
chr2 (258-418)||(26443777-26443926)
chr2 (277-396)||(22674296-22674415)
chr2 (360-415)||(28704374-28704429)
chr2 (81-125)||(43352737-43352781)
chr2 (86-125)||(4217242-4217281)
chr2 (86-125)||(9766190-9766229)
chr2 (86-125)||(9901000-9901039)
chr2 (86-125)||(10274333-10274372)
chr2 (86-125)||(11398599-11398638)
chr2 (86-125)||(19305846-19305885)
chr2 (86-125)||(22937084-22937123)
chr2 (86-125)||(24418453-24418492)
chr2 (86-125)||(26874313-26874352)
chr2 (86-125)||(27228785-27228824)
chr2 (86-125)||(28724745-28724784)
chr2 (86-125)||(29251567-29251606)
chr2 (86-125)||(34793644-34793683)
chr2 (86-125)||(35260351-35260390)
chr2 (86-125)||(35270976-35271015)
chr2 (86-125)||(39173521-39173560)
chr2 (86-125)||(40247955-40247994)
chr2 (86-125)||(43090025-43090064)
chr2 (81-125)||(24331176-24331220)
[»] scaffold0084 (1 HSPs)
scaffold0084 (360-415)||(46193-46248)
[»] scaffold0183 (1 HSPs)
scaffold0183 (354-415)||(7974-8035)
[»] scaffold0047 (2 HSPs)
scaffold0047 (354-415)||(5967-6028)
scaffold0047 (86-125)||(36302-36341)
[»] scaffold0161 (3 HSPs)
scaffold0161 (354-414)||(13243-13303)
scaffold0161 (354-414)||(17916-17976)
scaffold0161 (355-414)||(20854-20913)
[»] scaffold0820 (1 HSPs)
scaffold0820 (86-125)||(518-557)
[»] scaffold0388 (1 HSPs)
scaffold0388 (86-125)||(369-408)
[»] scaffold0105 (1 HSPs)
scaffold0105 (86-125)||(40405-40444)
[»] scaffold0022 (1 HSPs)
scaffold0022 (86-125)||(46393-46432)
[»] chr6 (22 HSPs)
chr6 (86-125)||(3668789-3668828)
chr6 (86-125)||(4638271-4638310)
chr6 (86-125)||(9115910-9115949)
chr6 (86-125)||(12720253-12720292)
chr6 (86-125)||(12862276-12862315)
chr6 (86-125)||(13920591-13920630)
chr6 (86-125)||(16956353-16956392)
chr6 (86-125)||(17612001-17612040)
chr6 (86-125)||(21126782-21126821)
chr6 (86-125)||(22383362-22383401)
chr6 (86-125)||(26032765-26032804)
chr6 (86-125)||(26872147-26872186)
chr6 (86-125)||(27349090-27349129)
chr6 (86-125)||(27409830-27409869)
chr6 (86-125)||(27501049-27501088)
chr6 (86-125)||(28254985-28255024)
chr6 (86-125)||(28333734-28333773)
chr6 (86-125)||(32304463-32304502)
chr6 (86-125)||(32965363-32965402)
chr6 (86-125)||(34810580-34810619)
chr6 (354-415)||(19071613-19071674)
chr6 (354-415)||(19446953-19447014)
[»] chr5 (38 HSPs)
chr5 (86-125)||(1118594-1118633)
chr5 (86-125)||(5297834-5297873)
chr5 (86-125)||(6979336-6979375)
chr5 (86-125)||(9339485-9339524)
chr5 (86-125)||(13530570-13530609)
chr5 (86-125)||(14033572-14033611)
chr5 (86-125)||(14454304-14454343)
chr5 (86-125)||(14565345-14565384)
chr5 (86-125)||(15743499-15743538)
chr5 (86-125)||(16000588-16000627)
chr5 (86-125)||(17610592-17610631)
chr5 (86-125)||(17722448-17722487)
chr5 (86-125)||(20783575-20783614)
chr5 (86-125)||(22150046-22150085)
chr5 (86-125)||(22679646-22679685)
chr5 (86-125)||(23299807-23299846)
chr5 (86-125)||(23399442-23399481)
chr5 (86-125)||(23700310-23700349)
chr5 (86-125)||(24570618-24570657)
chr5 (86-125)||(24811443-24811482)
chr5 (86-125)||(24824168-24824207)
chr5 (86-125)||(24943870-24943909)
chr5 (86-125)||(27049529-27049568)
chr5 (86-125)||(27463692-27463731)
chr5 (86-125)||(27619464-27619503)
chr5 (86-125)||(30234718-30234757)
chr5 (86-125)||(31352064-31352103)
chr5 (86-125)||(31837010-31837049)
chr5 (86-125)||(34055463-34055502)
chr5 (86-125)||(34775439-34775478)
chr5 (86-125)||(35219033-35219072)
chr5 (86-125)||(36589809-36589848)
chr5 (86-125)||(36691228-36691267)
chr5 (86-125)||(39356026-39356065)
chr5 (86-125)||(39498179-39498218)
chr5 (86-125)||(40393892-40393931)
chr5 (86-125)||(42046310-42046349)
chr5 (86-124)||(19467503-19467541)
[»] chr1 (16 HSPs)
chr1 (86-125)||(3178934-3178973)
chr1 (86-125)||(4174634-4174673)
chr1 (86-125)||(5643157-5643196)
chr1 (86-125)||(5840537-5840576)
chr1 (86-125)||(7514607-7514646)
chr1 (86-125)||(7692924-7692963)
chr1 (86-125)||(12737861-12737900)
chr1 (86-125)||(19163130-19163169)
chr1 (86-125)||(19184538-19184577)
chr1 (86-125)||(21870998-21871037)
chr1 (86-125)||(35641490-35641529)
chr1 (86-125)||(36239883-36239922)
chr1 (86-125)||(38102418-38102457)
chr1 (86-125)||(47611385-47611424)
chr1 (86-125)||(51649326-51649365)
chr1 (360-414)||(17718756-17718810)


Alignment Details
Target: chr3 (Bit Score: 238; Significance: 1e-131; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 33 - 400
Target Start/End: Complemental strand, 1729367 - 1728979
Alignment:
Q  33 tgagcaatggttcgattcaagatatcaactatggcgaatggaagcacaaatt----------ttaacttgctaagtttagatattaatctccaattagca 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||    
T  1729367 tgagcaatggttcgattcaagatatcaactatggcgaatggaagcacaaattcaaacaaattttaacttgctaagtttagatattaatctccaattagca 1729268  T
Q  123 tgttatagacgtctatgccaaagcaatttttcatttctcactgatagatagaaaactacattcaga-ttaaccaattctgagaaattagttttataaaca 221  Q
    |||| || || |||||||||||||||||||||||| ||||||||||||||||||||||||||| |  |||| ||||| ||||||||||||||||||||||    
T  1729267 tgttttaaacttctatgccaaagcaatttttcattactcactgatagatagaaaactacattccgggttaatcaattatgagaaattagttttataaaca 1729168  T
Q  222 ---------ctctttctcgtgaaaacaatggatttattagagtcattgatgactgtgcaaatgttcttatcaaacatcacttcatcaccactatgacaaa 312  Q
             |||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  1729167 ttgtctttcctctttccggtgaaaacaatggatttattagactcattgatgactgtgcaaatgttcttatcaaacatcagttcatcaccactatgacaac 1729068  T
Q  313 attgactt-atgttaagtaggttatatttcagtctatcatcaaaccatacatttttgatagagatagaagaattaccaatagttcatgt 400  Q
    |||||||| |||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  1729067 attgacttaatgttaagtaggttatgtttcagtccatcatcaaaccagacatttttgatagagatagaagaattaccaatagtccatgt 1728979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 266 - 412
Target Start/End: Complemental strand, 19638645 - 19638499
Alignment:
Q  266 tgtgcaaatgttcttatcaaacatcacttcatcaccactatgacaaaattgacttatgttaagtaggttatatttcagtctatcatcaaaccatacattt 365  Q
    ||||||| ||||||||||||||||||| |||| |||||||| |||||||| ||||||| |||||||||||| | | |||| |||| ||||| | |||||     
T  19638645 tgtgcaattgttcttatcaaacatcacatcataaccactatcacaaaatttacttatgctaagtaggttatgtcttagtccatcaacaaactacacatta 19638546  T
Q  366 ttgatagagatagaagaattaccaatagttcatgtaccaataatctt 412  Q
    || |||||||||||||| ||||  ||||||||  ||||||| |||||    
T  19638545 ttaatagagatagaagagttacgtatagttcacataccaatgatctt 19638499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 124
Target Start/End: Original strand, 18004338 - 18004376
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatg 124  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  18004338 taacttgctaagtttagaaattaatctccaattagcatg 18004376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 507616 - 507577
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  507616 taacttgctaattttagaaattaatctccaattagcatgt 507577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 1787317 - 1787278
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  1787317 taacttgctaattttagaaattaatctccaattagcatgt 1787278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 3179335 - 3179296
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  3179335 taacttgctaattttagaaattaatctccaattagcatgt 3179296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 4751110 - 4751149
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  4751110 taacttgctaattttagaaattaatctccaattagcatgt 4751149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 5540467 - 5540428
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  5540467 taacttgctaattttagaaattaatctccaattagcatgt 5540428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 5583079 - 5583040
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  5583079 taacttgctaattttagaaattaatctccaattagcatgt 5583040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 336
Target Start/End: Complemental strand, 5798623 - 5798564
Alignment:
Q  277 tcttatcaaacatcacttcatcaccactatgacaaaattgacttatgttaagtaggttat 336  Q
    |||||||||||| ||||||||  ||||||| |||||||||||| ||| ||| ||||||||    
T  5798623 tcttatcaaacaccacttcatatccactatcacaaaattgactaatgctaaataggttat 5798564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 5869142 - 5869103
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  5869142 taacttgctaattttagaaattaatctccaattagcatgt 5869103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 6213507 - 6213468
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  6213507 taacttgctaattttagaaattaatctccaattagcatgt 6213468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 6493792 - 6493753
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  6493792 taacttgctaattttagaaattaatctccaattagcatgt 6493753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 9384107 - 9384068
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  9384107 taacttgctaattttagaaattaatctccaattagcatgt 9384068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 10630394 - 10630355
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  10630394 taacttgctaattttagaaattaatctccaattagcatgt 10630355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 11275831 - 11275792
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  11275831 taacttgctaattttagaaattaatctccaattagcatgt 11275792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 12241005 - 12240966
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  12241005 taacttgctaattttagaaattaatctccaattagcatgt 12240966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 12290426 - 12290387
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  12290426 taacttgctaattttagaaattaatctccaattagcatgt 12290387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 13129062 - 13129101
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  13129062 taacttgctaattttagaaattaatctccaattagcatgt 13129101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 13146525 - 13146564
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  13146525 taacttgctaagtttagagattaatctccagttagcatgt 13146564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 13265104 - 13265065
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  13265104 taacttgctaattttagaaattaatctccaattagcatgt 13265065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 13376114 - 13376075
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  13376114 taacttgctaattttagaaattaatctccaattagcatgt 13376075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 13386708 - 13386669
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  13386708 taacttgctaattttagaaattaatctccaattagcatgt 13386669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 14473012 - 14473051
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  14473012 taacttgctaattttagaaattaatctccaattagcatgt 14473051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 15654554 - 15654507
Alignment:
Q  78 acaaattttaacttgctaagtttagatattaatctccaattagcatgt 125  Q
    |||| |||||||||||| | |||||| |||||||||||||||||||||    
T  15654554 acaagttttaacttgctgattttagaaattaatctccaattagcatgt 15654507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 16394493 - 16394454
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  16394493 taacttgctaattttagaaattaatctccaattagcatgt 16394454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 17014575 - 17014614
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  17014575 taacttgctaagtttagagattaatctccagttagcatgt 17014614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 17899553 - 17899514
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  17899553 taacttgctaattttagaaattaatctccaattagcatgt 17899514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 336
Target Start/End: Complemental strand, 18698257 - 18698198
Alignment:
Q  277 tcttatcaaacatcacttcatcaccactatgacaaaattgacttatgttaagtaggttat 336  Q
    |||||||||||||||| |||| |||||||| ||||||  |||| ||| ||||||||||||    
T  18698257 tcttatcaaacatcacatcataaccactatcacaaaaccgactaatgctaagtaggttat 18698198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 19785813 - 19785852
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  19785813 taacttgctaattttagaaattaatctccaattagcatgt 19785852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 20676643 - 20676604
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  20676643 taacttgctaattttagaaattaatctccaattagcatgt 20676604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 23764685 - 23764724
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  23764685 taacttgctaattttagaaattaatctccaattagcatgt 23764724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 24386964 - 24386925
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  24386964 taacttgctaattttagaaattaatctccaattagcatgt 24386925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 24667261 - 24667300
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  24667261 taacttgctaattttagaaattaatctccaattagcatgt 24667300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 28317684 - 28317645
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  28317684 taacttgctaattttagaaattaatctccaattagcatgt 28317645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 29464652 - 29464613
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  29464652 taacttgctaattttagaaattaatctccaattagcatgt 29464613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 37873852 - 37873891
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  37873852 taacttgctaattttagaaattaatctccaattagcatgt 37873891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 37882370 - 37882409
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  37882370 taacttgctaattttagaaattaatctccaattagcatgt 37882409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 38202043 - 38202082
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  38202043 taacttgctaattttagaaattaatctccaattagcatgt 38202082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 39379475 - 39379514
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  39379475 taacttgctaattttagaaattaatctccaattagcatgt 39379514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 41691040 - 41691079
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  41691040 taacttgctaattttagaaattaatctccaattagcatgt 41691079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 257 - 418
Target Start/End: Original strand, 18163042 - 18163203
Alignment:
Q  257 attgatgactgtgcaaatgttcttatcaaacatcacttcatcaccactatgacaaaattgacttatgttaagtaggttatatttcagtctatcatcaaac 356  Q
    |||||| ||||||||  ||||||||| |||||||||||||| |||| ||| |||||||||||||||| |||||||||||| | ||| || |||| |||||    
T  18163042 attgattactgtgcagttgttcttattaaacatcacttcataaccattatcacaaaattgacttatgctaagtaggttatgtctcaatccatcaacaaac 18163141  T
Q  357 catacatttttgatagagatagaagaattaccaatagttcatgtaccaataatcttgccttt 418  Q
    || ||||| || ||| ||||| || | |||||||||||||   |||||||||||||||||||    
T  18163142 caaacattattaataaagataaaatagttaccaatagttctcataccaataatcttgccttt 18163203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 415
Target Start/End: Original strand, 17012329 - 17012384
Alignment:
Q  360 acatttttgatagagatagaagaattaccaatagttcatgtaccaataatcttgcc 415  Q
    ||||| || ||||||||||| || ||||||||||||| ||||||||||||||||||    
T  17012329 acattattaatagagatagaggagttaccaatagttcctgtaccaataatcttgcc 17012384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 415
Target Start/End: Complemental strand, 17544872 - 17544817
Alignment:
Q  360 acatttttgatagagatagaagaattaccaatagttcatgtaccaataatcttgcc 415  Q
    ||||| || ||||||||||| || ||||||||||||| ||||||||||||||||||    
T  17544872 acattattaatagagatagaggagttaccaatagttcctgtaccaataatcttgcc 17544817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 415
Target Start/End: Original strand, 45563795 - 45563850
Alignment:
Q  360 acatttttgatagagatagaagaattaccaatagttcatgtaccaataatcttgcc 415  Q
    ||||| || ||||||||||| || ||||||||||||| ||||||||||||||||||    
T  45563795 acattgttaatagagatagaggagttaccaatagttcctgtaccaataatcttgcc 45563850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 249200 - 249239
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  249200 taacttgctaattttagaaattaatctccaattagcatgt 249239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 812301 - 812340
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  812301 taacttgctaattttagaaattaatctccaattagcatgt 812340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 3352116 - 3352077
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  3352116 taacttgctaattttagaaattaatctccaattagcatgt 3352077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 6158458 - 6158497
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  6158458 taacttgctaattttagaaattaatctccaattagcatgt 6158497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 13692051 - 13692012
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  13692051 taacttgctaattttagaaattaatctccaattagcatgt 13692012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 16744064 - 16744103
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  16744064 taacttgctaattttagaaattaatctccaattagcatgt 16744103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 19136072 - 19136111
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  19136072 taacttgctaattttagaaattaatctccaattagcatgt 19136111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 19232170 - 19232209
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  19232170 taacttgctaattttagaaattaatctccaattagcatgt 19232209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 19425717 - 19425756
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  19425717 taacttgctaattttagaaattaatctccaattagcatgt 19425756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 30318186 - 30318147
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  30318186 taacttgctaattttagaaattaatctccaattagcatgt 30318147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 32081177 - 32081138
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  32081177 taacttgctaattttagaaattaatctccaattagcatgt 32081138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 36085313 - 36085352
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  36085313 taacttgctaattttagaaattaatctccaattagcatgt 36085352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 36300318 - 36300357
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  36300318 taacttgctaattttagaaattaatctccaattagcatgt 36300357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 44488506 - 44488545
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  44488506 taacttgctaattttagaaattaatctccaattagcatgt 44488545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 125
Target Start/End: Original strand, 23790034 - 23790072
Alignment:
Q  87 aacttgctaagtttagatattaatctccaattagcatgt 125  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  23790034 aacttgctgagtttagagattaatctccaattagcatgt 23790072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 125
Target Start/End: Original strand, 23802081 - 23802119
Alignment:
Q  87 aacttgctaagtttagatattaatctccaattagcatgt 125  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  23802081 aacttgctgagtttagagattaatctccaattagcatgt 23802119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 5e-29; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 277 - 406
Target Start/End: Complemental strand, 16111191 - 16111062
Alignment:
Q  277 tcttatcaaacatcacttcatcaccactatgacaaaattgacttatgttaagtaggttatatttcagtctatcatcaaaccatacatttttgatagagat 376  Q
    |||||||||||||||| |||| |||||||| |||||||||||| ||| |||||||||||| | | |||| |||| ||||||| ||||| || ||||||||    
T  16111191 tcttatcaaacatcacatcataaccactatcacaaaattgactaatgctaagtaggttatgtctaagtccatcaacaaaccacacattattaatagagat 16111092  T
Q  377 agaagaattaccaatagttcatgtaccaat 406  Q
    |||||| || |||||||||||| |||||||    
T  16111091 agaagagttgccaatagttcatataccaat 16111062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 266 - 414
Target Start/End: Original strand, 16404666 - 16404814
Alignment:
Q  266 tgtgcaaatgttcttatcaaacatcacttcatcaccactatgacaaaattgacttatgttaagtaggttatatttcagtctatcatcaaaccatacattt 365  Q
    ||||||| || |||||||||||||||| |||| |||||||| |||||||||||| ||| |||||| ||||| |||||| |||||  | ||||| |||||     
T  16404666 tgtgcaattggtcttatcaaacatcacatcataaccactatcacaaaattgactgatgctaagtaagttatgtttcagactatctaccaaccacacatta 16404765  T
Q  366 ttgatagagatagaagaattaccaatagttcatgtaccaataatcttgc 414  Q
    || ||||||||| |||| ||||||||||||| ||  ||||| |||||||    
T  16404766 ttaatagagataaaagagttaccaatagttcctgatccaatgatcttgc 16404814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 225 - 394
Target Start/End: Original strand, 24831717 - 24831886
Alignment:
Q  225 tttctcgtgaaaacaatggatttattagagtcattgatgactgtgcaaatgttcttatcaaacatcacttcatcaccactatgacaaaattgacttatgt 324  Q
    ||||| |||||||| |||||||  | |||||   |||||| ||||||  |||||||||||||||  ||||||| |||| ||| ||||||||||||||||     
T  24831717 tttctagtgaaaactatggattcgtcagagtttctgatgattgtgcagttgttcttatcaaacactacttcataaccaatatcacaaaattgacttatgc 24831816  T
Q  325 taagtaggttatatttcagtctatcatcaaaccatacatttttgatagagatagaagaattaccaatagt 394  Q
    ||||||||||||  || ||||||||  | ||| | ||||| || ||||||||||| || |||||||||||    
T  24831817 taagtaggttatgcttgagtctatctactaactaaacattattaatagagatagaggagttaccaatagt 24831886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 395
Target Start/End: Complemental strand, 27289469 - 27289348
Alignment:
Q  274 tgttcttatcaaacatcacttcatcaccactatgacaaaattgacttatgttaagtaggttatatttcagtctatcatcaaaccatacatttttgataga 373  Q
    |||||||||||||||| || ||||  ||| ||| |||||||||||||||| ||||||| |||| | | |||| |||| ||||||| | ||| |  |||||    
T  27289469 tgttcttatcaaacattacatcatatccattatcacaaaattgacttatgctaagtagattatgtcttagtccatcaacaaaccaaatattatgaataga 27289370  T
Q  374 gatagaagaattaccaatagtt 395  Q
    ||||||||| ||||||||||||    
T  27289369 gatagaagagttaccaatagtt 27289348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 415
Target Start/End: Original strand, 13877021 - 13877076
Alignment:
Q  360 acatttttgatagagatagaagaattaccaatagttcatgtaccaataatcttgcc 415  Q
    ||||| || ||||||||||| || ||||||||||||||||||||||||||||||||    
T  13877021 acattattaatagagatagaggagttaccaatagttcatgtaccaataatcttgcc 13877076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 4415536 - 4415497
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  4415536 taacttgctaagtttagatattaatctccagttagcatgt 4415497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 416
Target Start/End: Original strand, 14143438 - 14143577
Alignment:
Q  277 tcttatcaaacatcacttcatcaccactatgacaaaattgacttatgttaagtaggttatatttcagtctatcatcaaaccatacatttttgatagagat 376  Q
    ||||| |||||||||| |||| |||| ||| |||||||||||| ||  | |||||||||| ||  || | |||  | | ||| ||||| || || |||||    
T  14143438 tcttaccaaacatcacatcataaccattatcacaaaattgactaatacttagtaggttatgttaaagaccatctaccagccacacattattaattgagat 14143537  T
Q  377 agaagaattaccaatagttcatgtaccaataatcttgcct 416  Q
    ||| || ||||||||||||| ||||||||| |||||||||    
T  14143538 agaggagttaccaatagttcctgtaccaatgatcttgcct 14143577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 415
Target Start/End: Complemental strand, 16312771 - 16312710
Alignment:
Q  354 aaccatacatttttgatagagatagaagaattaccaatagttcatgtaccaataatcttgcc 415  Q
    ||||||||||| || || |||||||| || ||||||||||||| ||||||||| ||||||||    
T  16312771 aaccatacattattaattgagatagaggagttaccaatagttcctgtaccaatgatcttgcc 16312710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 366 - 415
Target Start/End: Complemental strand, 16549269 - 16549220
Alignment:
Q  366 ttgatagagatagaagaattaccaatagttcatgtaccaataatcttgcc 415  Q
    |||||||||||||| || ||||||||||||| ||||||||| ||||||||    
T  16549269 ttgatagagatagaggagttaccaatagttcttgtaccaatgatcttgcc 16549220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 366 - 415
Target Start/End: Original strand, 16616393 - 16616442
Alignment:
Q  366 ttgatagagatagaagaattaccaatagttcatgtaccaataatcttgcc 415  Q
    |||||||||||||| || ||||||||||||| ||||||||| ||||||||    
T  16616393 ttgatagagatagaggagttaccaatagttcttgtaccaatgatcttgcc 16616442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 174263 - 174302
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  174263 taacttgctaattttagaaattaatctccaattagcatgt 174302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 460516 - 460477
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  460516 taacttgctaattttagaaattaatctccaattagcatgt 460477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 1994929 - 1994968
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  1994929 taacttgctaattttagaaattaatctccaattagcatgt 1994968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 2709143 - 2709104
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  2709143 taacttgctaattttagaaattaatctccaattagcatgt 2709104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 4219381 - 4219420
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  4219381 taacttgctaattttagaaattaatctccaattagcatgt 4219420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 6870760 - 6870721
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  6870760 taacttgctaattttagaaattaatctccaattagcatgt 6870721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 8005596 - 8005557
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  8005596 taacttgctaattttagaaattaatctccaattagcatgt 8005557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 8624718 - 8624757
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  8624718 taacttgctaattttagaaattaatctccaattagcatgt 8624757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 9092607 - 9092646
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  9092607 taacttgctaattttagaaattaatctccaattagcatgt 9092646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 9166955 - 9166994
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  9166955 taacttgctaattttagaaattaatctccaattagcatgt 9166994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 9440636 - 9440675
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  9440636 taacttgctaattttagaaattaatctccaattagcatgt 9440675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 11012560 - 11012599
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  11012560 taacttgctaattttagaaattaatctccaattagcatgt 11012599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 17953644 - 17953605
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  17953644 taacttgctaattttagaaattaatctccaattagcatgt 17953605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 20986630 - 20986669
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  20986630 taacttgctaattttagaaattaatctccaattagcatgt 20986669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 24741474 - 24741513
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  24741474 taacttgctaattttagaaattaatctccaattagcatgt 24741513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 26393624 - 26393585
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  26393624 taacttgctaattttagaaattaatctccaattagcatgt 26393585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 26656865 - 26656826
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  26656865 taacttgctaattttagaaattaatctccaattagcatgt 26656826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 40045634 - 40045595
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  40045634 taacttgctaattttagaaattaatctccaattagcatgt 40045595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 42873221 - 42873260
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  42873221 taacttgctaattttagaaattaatctccaattagcatgt 42873260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 415
Target Start/End: Original strand, 33603681 - 33603742
Alignment:
Q  354 aaccatacatttttgatagagatagaagaattaccaatagttcatgtaccaataatcttgcc 415  Q
    ||||| ||||| ||||| |||||||| ||  || ||||||||||||||||||| ||||||||    
T  33603681 aaccacacattattgatggagatagaggagctatcaatagttcatgtaccaatgatcttgcc 33603742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 258 - 406
Target Start/End: Original strand, 1972 - 2120
Alignment:
Q  258 ttgatgactgtgcaaatgttcttatcaaacatcacttcatcaccactatgacaaaattgacttatgttaagtaggttatatttcagtctatcatcaaacc 357  Q
    ||||| ||||||||  || ||||| ||||| |||| |||| |||||||| |||||| ||||| |||||||||||||||| | | |||| |||| ||||||    
T  1972 ttgattactgtgcagttgctcttaccaaacgtcacatcataaccactatcacaaaactgactaatgttaagtaggttatgtctaagtccatcaacaaacc 2071  T
Q  358 atacatttttgatagagatagaagaattaccaatagttcatgtaccaat 406  Q
    | ||||| || |||||||||||||| ||||||||||||||| |||||||    
T  2072 acacattattaatagagatagaagagttaccaatagttcatataccaat 2120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 7e-25; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 78 - 418
Target Start/End: Complemental strand, 24902095 - 24901753
Alignment:
Q  78 acaaattttaacttgctaagtttagatattaatctccaattagcatgttatagacgtctatgccaaagcaatttttcatttctcactgatagataga-aa 176  Q
    |||| |||| |||||| ||||||||| |||||||||||||||||||||  || |||||||||||||||  |||||||||  |||| ||||||| ||| ||    
T  24902095 acaagtttttacttgcaaagtttagagattaatctccaattagcatgtcctaaacgtctatgccaaagtcatttttcatcactcattgataga-agacaa 24901997  T
Q  177 actacattcagattaaccaattctgagaaattagttttataaaca---------ctctttctcgtgaaaacaatggatttattagagtcattgatgactg 267  Q
    |||| |||   || | ||||||| ||||||||| |||||||||||         |||||||| || ||  |||||||||| | ||| ||||        |    
T  24901996 actatattataatcatccaattcagagaaattatttttataaacattgtctttactctttctagtaaacccaatggatttgtcagaatcat--------g 24901905  T
Q  268 tgcaaatgttcttatcaaacatcacttcatcaccactatgacaaaattgacttatgttaagtaggttatatttcagtctatcatcaaaccatacattttt 367  Q
    ||||  ||||||||| |||||||| ||||| |||||||| |||||||||| ||  | |||||| ||| | ||| |||| |||| | ||||| ||||| ||    
T  24901904 tgcagttgttcttattaaacatcatttcataaccactatcacaaaattgatttcagataagtaagttttgttttagtccatcaactaaccaaacattatt 24901805  T
Q  368 gatagagatag-aagaattaccaatagttcatgtaccaataatcttgccttt 418  Q
     |||||||||| ||  ||||||||||||  ||||| ||||||||||||||||    
T  24901804 catagagataggaattattaccaatagtctatgtaacaataatcttgccttt 24901753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 277 - 415
Target Start/End: Original strand, 39042502 - 39042640
Alignment:
Q  277 tcttatcaaacatcacttcatcaccactatgacaaaattgacttatgttaagtaggttatatttcagtctatcatcaaaccatacatttttgatagagat 376  Q
    |||||||||||||||| |||| |||||||| |||||| ||||| ||| |||||||||||| | | || | |||  | ||||| ||||| || ||||||||    
T  39042502 tcttatcaaacatcacatcataaccactatcacaaaactgactaatgctaagtaggttatgtctaagaccatctaccaaccacacattattaatagagat 39042601  T
Q  377 agaagaattaccaatagttcatgtaccaataatcttgcc 415  Q
    ||| || |||| |||||||||||||||||| ||||||||    
T  39042602 agaggagttactaatagttcatgtaccaatgatcttgcc 39042640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 255 - 413
Target Start/End: Complemental strand, 11451526 - 11451368
Alignment:
Q  255 tcattgatgactgtgcaaatgttcttatcaaacatcacttcatcaccactatgacaaaattgacttatgttaagtaggttatatttcagtctatcatcaa 354  Q
    |||||||||| ||| ||  ||||||||||||||  ||||| ||  ||||||| |||||||||||||||  |||||||||||| | | |||| || | | |    
T  11451526 tcattgatgattgtacatgtgttcttatcaaactccactttatacccactatcacaaaattgacttataataagtaggttatgtcttagtccataaacta 11451427  T
Q  355 accatacatttttgatagagatagaagaattaccaatagttcatgtaccaataatcttg 413  Q
    | |||||||| ||||| |||||| |||| ||||||||||| |  ||||||| |||||||    
T  11451426 agcatacattattgattgagataaaagagttaccaatagtccccgtaccaacaatcttg 11451368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 265 - 415
Target Start/End: Complemental strand, 17528601 - 17528451
Alignment:
Q  265 ctgtgcaaatgttcttatcaaacatcacttcatcaccactatgacaaaattgacttatgttaagtaggttatatttcagtctatcatcaaaccatacatt 364  Q
    |||||||  ||||| ||| ||||||||| |||| |||||||  |||||||||||| ||| ||||||| |||||| |  ||| ||||  |||||| |||||    
T  17528601 ctgtgcagttgttcgtataaaacatcacatcataaccactaccacaaaattgactaatgctaagtagtttatatctatgtccatcaataaaccacacatt 17528502  T
Q  365 tttgatagagatagaagaattaccaatagttcatgtaccaataatcttgcc 415  Q
     || ||||||||| |||| ||||||| ||||||  ||||||| || |||||    
T  17528501 attaatagagatataagagttaccaacagttcacataccaatgattttgcc 17528451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 415
Target Start/End: Complemental strand, 15867258 - 15867203
Alignment:
Q  360 acatttttgatagagatagaagaattaccaatagttcatgtaccaataatcttgcc 415  Q
    ||||| || ||||||||| | || ||||||||||||||||||||||||||||||||    
T  15867258 acattattaatagagataaatgagttaccaatagttcatgtaccaataatcttgcc 15867203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 11543209 - 11543290
Alignment:
Q  255 tcattgatgactgtgcaaatgttcttatcaaacatcacttcatcaccactatgacaaaattgacttatgttaagtaggttat 336  Q
    |||||||||| ||| ||  ||||||||||||||  ||||| ||  ||||||| |||||||||||||||  ||||||||||||    
T  11543209 tcattgatgattgtacatgtgttcttatcaaactccactttatacccactatcacaaaattgacttataataagtaggttat 11543290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 357 - 413
Target Start/End: Original strand, 17244463 - 17244519
Alignment:
Q  357 catacatttttgatagagatagaagaattaccaatagttcatgtaccaataatcttg 413  Q
    |||||||| || || |||||||| || ||||||||||||||||||||||| ||||||    
T  17244463 catacattattaattgagatagaggagttaccaatagttcatgtaccaatgatcttg 17244519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 3378907 - 3378946
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  3378907 taacttgctaattttagaaattaatctccaattagcatgt 3378946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 4991245 - 4991206
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  4991245 taacttgctaattttagaaattaatctccaattagcatgt 4991206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 5019541 - 5019580
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  5019541 taacttgctaattttagaaattaatctccaattagcatgt 5019580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 10298076 - 10298115
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  10298076 taacttgctaattttagaaattaatctccaattagcatgt 10298115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 10744048 - 10744009
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  10744048 taacttgctaattttagaaattaatctccaattagcatgt 10744009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 10957817 - 10957778
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  10957817 taacttgctaattttagaaattaatctccaattagcatgt 10957778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 14839507 - 14839468
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  14839507 taacttgctaattttagaaattaatctccaattagcatgt 14839468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 15200253 - 15200214
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  15200253 taacttgctaattttagaaattaatctccaattagcatgt 15200214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 16263270 - 16263309
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  16263270 taacttgctaattttagaaattaatctccaattagcatgt 16263309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 16312517 - 16312556
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  16312517 taacttgctaattttagaaattaatctccaattagcatgt 16312556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 17925503 - 17925542
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  17925503 taacttgctaattttagaaattaatctccaattagcatgt 17925542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 18755940 - 18755901
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  18755940 taacttgctaattttagaaattaatctccaattagcatgt 18755901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 19947845 - 19947806
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  19947845 taacttgctaattttagaaattaatctccaattagcatgt 19947806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 22003822 - 22003861
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  22003822 taacttgctaattttagaaattaatctccaattagcatgt 22003861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 24647736 - 24647775
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  24647736 taacttgctaattttagaaattaatctccaattagcatgt 24647775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 27663978 - 27664017
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  27663978 taacttgctaattttagaaattaatctccaattagcatgt 27664017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 27818396 - 27818357
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  27818396 taacttgctaattttagaaattaatctccaattagcatgt 27818357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 30929943 - 30929904
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  30929943 taacttgctaattttagaaattaatctccaattagcatgt 30929904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 36025696 - 36025735
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  36025696 taacttgctaattttagaaattaatctccaattagcatgt 36025735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 49514941 - 49514980
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  49514941 taacttgctaattttagaaattaatctccaattagcatgt 49514980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 55748702 - 55748663
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  55748702 taacttgctaattttagaaattaatctccaattagcatgt 55748663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 264 - 415
Target Start/End: Original strand, 74894 - 75045
Alignment:
Q  264 actgtgcaaatgttcttatcaaacatcacttcatcaccactatgacaaaattgacttatgttaagtaggttatatttcagtctatcatcaaaccatacat 363  Q
    ||||||||  || |||||||||||||||| |||| |||| ||| |||||| ||||| ||  |||| ||||||| ||| || | |||  | ||||| ||||    
T  74894 actgtgcagttggtcttatcaaacatcacatcataaccattatcacaaaaatgactgatactaagcaggttatgttttagaccatctaccaaccacacat 74993  T
Q  364 ttttgatagagatagaagaattaccaatagttcatgtaccaataatcttgcc 415  Q
    | || ||||||||||| || |||||| |||||| ||||||||||||||||||    
T  74994 tattaatagagatagaggagttaccagtagttcctgtaccaataatcttgcc 75045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 418
Target Start/End: Original strand, 26443777 - 26443926
Alignment:
Q  258 ttgatgactgtgcaaatgttcttatcaaacatcacttcatcaccactatgacaaaattgacttatgttaagtaggttatatttcagtctatcatcaaacc 357  Q
    ||||||| |||||||||||||||  |||||| || ||||| |||||||| | ||||||||         |||||||||| | | |||| |||| ||||||    
T  26443777 ttgatgaatgtgcaaatgttctt--caaacaccatttcataaccactatcataaaattga---------agtaggttatgtctaagtccatcaccaaacc 26443865  T
Q  358 atacatttttgatagagatagaagaattaccaatagttcatgtaccaataatcttgccttt 418  Q
    | ||||| ||||| ||||||||||||||||||||||| ||  |||||||||| | ||||||    
T  26443866 agacattattgattgagatagaagaattaccaatagtccacataccaataatttagccttt 26443926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 396
Target Start/End: Original strand, 22674296 - 22674415
Alignment:
Q  277 tcttatcaaacatcacttcatcaccactatgacaaaattgacttatgttaagtaggttatatttcagtctatcatcaaaccatacatttttgatagagat 376  Q
    |||||||||||||||| |||| || ||||| |||||| | ||| ||| |||| ||||||| |   |||| |||| ||||||| ||||| || ||||||||    
T  22674296 tcttatcaaacatcacatcataactactatcacaaaacttactaatgctaagcaggttatgtcaaagtccatcaacaaaccacacattattaatagagat 22674395  T
Q  377 agaagaattaccaatagttc 396  Q
    |||||| ||| |||||||||    
T  22674396 agaagagttatcaatagttc 22674415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 415
Target Start/End: Complemental strand, 28704429 - 28704374
Alignment:
Q  360 acatttttgatagagatagaagaattaccaatagttcatgtaccaataatcttgcc 415  Q
    ||||| || ||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  28704429 acattattaatagagatagaggaattaccaatagttcttgtaccaatgatcttgcc 28704374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 43352737 - 43352781
Alignment:
Q  81 aattttaacttgctaagtttagatattaatctccaattagcatgt 125  Q
    |||| ||||||||||| |||||| |||||||||||||||||||||    
T  43352737 aattgtaacttgctaattttagaaattaatctccaattagcatgt 43352781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 4217242 - 4217281
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  4217242 taacttgctaattttagaaattaatctccaattagcatgt 4217281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 9766229 - 9766190
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  9766229 taacttgctaattttagaaattaatctccaattagcatgt 9766190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 9901039 - 9901000
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  9901039 taacttgctaattttagaaattaatctccaattagcatgt 9901000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 10274333 - 10274372
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  10274333 taacttgctaattttagaaattaatctccaattagcatgt 10274372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 11398638 - 11398599
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  11398638 taacttgctaattttagaaattaatctccaattagcatgt 11398599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 19305885 - 19305846
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  19305885 taacttgctaattttagaaattaatctccaattagcatgt 19305846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 22937123 - 22937084
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  22937123 taacttgctaattttagaaattaatctccaattagcatgt 22937084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 24418492 - 24418453
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  24418492 taacttgctaattttagaaattaatctccaattagcatgt 24418453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 26874313 - 26874352
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  26874313 taacttgctaattttagaaattaatctccaattagcatgt 26874352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 27228785 - 27228824
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  27228785 taacttgctaattttagaaattaatctccaattagcatgt 27228824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 28724784 - 28724745
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  28724784 taacttgctaattttagaaattaatctccaattagcatgt 28724745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 29251567 - 29251606
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  29251567 taacttgctaattttagaaattaatctccaattagcatgt 29251606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 34793683 - 34793644
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  34793683 taacttgctaattttagaaattaatctccaattagcatgt 34793644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 35260351 - 35260390
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  35260351 taacttgctaattttagaaattaatctccaattagcatgt 35260390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 35270976 - 35271015
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  35270976 taacttgctaattttagaaattaatctccaattagcatgt 35271015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 39173560 - 39173521
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  39173560 taacttgctaattttagaaattaatctccaattagcatgt 39173521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 40247955 - 40247994
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  40247955 taacttgctaattttagaaattaatctccaattagcatgt 40247994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 43090025 - 43090064
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  43090025 taacttgctaattttagaaattaatctccaattagcatgt 43090064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 24331220 - 24331176
Alignment:
Q  81 aattttaacttgctaagtttagatattaatctccaattagcatgt 125  Q
    |||| ||||||| ||| |||||| |||||||||||||||||||||    
T  24331220 aattgtaacttgttaattttagaaattaatctccaattagcatgt 24331176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 415
Target Start/End: Original strand, 46193 - 46248
Alignment:
Q  360 acatttttgatagagatagaagaattaccaatagttcatgtaccaataatcttgcc 415  Q
    ||||| || ||||||||||| || ||||||||||||| ||||||||||||||||||    
T  46193 acattattaatagagatagaggagttaccaatagttcctgtaccaataatcttgcc 46248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 415
Target Start/End: Original strand, 7974 - 8035
Alignment:
Q  354 aaccatacatttttgatagagatagaagaattaccaatagttcatgtaccaataatcttgcc 415  Q
    ||||| ||||| || ||||||||||| || ||||||||||||| ||||||||| ||||||||    
T  7974 aaccacacattattaatagagatagaggagttaccaatagttcctgtaccaatgatcttgcc 8035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 415
Target Start/End: Original strand, 5967 - 6028
Alignment:
Q  354 aaccatacatttttgatagagatagaagaattaccaatagttcatgtaccaataatcttgcc 415  Q
    ||||| ||||| || || ||||||||||| ||||||||||||| ||||||||| ||||||||    
T  5967 aaccacacattattaattgagatagaagagttaccaatagttcctgtaccaatgatcttgcc 6028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 36341 - 36302
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  36341 taacttgctaattttagaaattaatctccaattagcatgt 36302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 414
Target Start/End: Complemental strand, 13303 - 13243
Alignment:
Q  354 aaccatacatttttgatagagatagaagaattaccaatagttcatgtaccaataatcttgc 414  Q
    ||||| ||||| || || |||||||| || ||||||||||||||||||||||| |||||||    
T  13303 aaccacacattattaattgagatagaggagttaccaatagttcatgtaccaatgatcttgc 13243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 414
Target Start/End: Complemental strand, 17976 - 17916
Alignment:
Q  354 aaccatacatttttgatagagatagaagaattaccaatagttcatgtaccaataatcttgc 414  Q
    ||||| ||||| || || |||||||| || ||||||||||||||||||||||| |||||||    
T  17976 aaccacacattattaattgagatagaggagttaccaatagttcatgtaccaatgatcttgc 17916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 414
Target Start/End: Complemental strand, 20913 - 20854
Alignment:
Q  355 accatacatttttgatagagatagaagaattaccaatagttcatgtaccaataatcttgc 414  Q
    |||| ||||| || || |||||||| || ||||||||||||||||||||||| |||||||    
T  20913 accacacattattaattgagatagaggagttaccaatagttcatgtaccaatgatcttgc 20854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0820 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0820
Description:

Target: scaffold0820; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 557 - 518
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  557 taacttgctaattttagaaattaatctccaattagcatgt 518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 369 - 408
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  369 taacttgctaattttagaaattaatctccaattagcatgt 408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 40444 - 40405
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  40444 taacttgctaattttagaaattaatctccaattagcatgt 40405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 46432 - 46393
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  46432 taacttgctaattttagaaattaatctccaattagcatgt 46393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.00000001; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 3668789 - 3668828
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  3668789 taacttgctaattttagaaattaatctccaattagcatgt 3668828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 4638271 - 4638310
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  4638271 taacttgctaattttagaaattaatctccaattagcatgt 4638310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 9115949 - 9115910
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  9115949 taacttgctaattttagaaattaatctccaattagcatgt 9115910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 12720292 - 12720253
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  12720292 taacttgctaattttagaaattaatctccaattagcatgt 12720253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 12862276 - 12862315
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  12862276 taacttgctaattttagaaattaatctccaattagcatgt 12862315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 13920591 - 13920630
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  13920591 taacttgctaattttagaaattaatctccaattagcatgt 13920630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 16956353 - 16956392
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  16956353 taacttgctaattttagaaattaatctccaattagcatgt 16956392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 17612040 - 17612001
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  17612040 taacttgctaagtttagagattaatctccagttagcatgt 17612001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 21126782 - 21126821
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  21126782 taacttgctaagtttagagattaatctccagttagcatgt 21126821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 22383362 - 22383401
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  22383362 taacttgctaagtttagagattaatctccagttagcatgt 22383401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 26032765 - 26032804
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  26032765 taacttgctaattttagaaattaatctccaattagcatgt 26032804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 26872147 - 26872186
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  26872147 taacttgctaattttagaaattaatctccaattagcatgt 26872186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 27349090 - 27349129
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  27349090 taacttgctaattttagaaattaatctccaattagcatgt 27349129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 27409830 - 27409869
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  27409830 taacttgctaattttagaaattaatctccaattagcatgt 27409869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 27501049 - 27501088
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  27501049 taacttgctaattttagaaattaatctccaattagcatgt 27501088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 28255024 - 28254985
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  28255024 taacttgctaattttagaaattaatctccaattagcatgt 28254985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 28333773 - 28333734
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  28333773 taacttgctaattttagaaattaatctccaattagcatgt 28333734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 32304502 - 32304463
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  32304502 taacttgctaattttagaaattaatctccaattagcatgt 32304463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 32965402 - 32965363
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  32965402 taacttgctaattttagaaattaatctccaattagcatgt 32965363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 34810619 - 34810580
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  34810619 taacttgctaattttagaaattaatctccaattagcatgt 34810580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 415
Target Start/End: Complemental strand, 19071674 - 19071613
Alignment:
Q  354 aaccatacatttttgatagagatagaagaattaccaatagttcatgtaccaataatcttgcc 415  Q
    ||||| ||||| || || |||||||| || ||||||||||||| ||||||||| ||||||||    
T  19071674 aaccacacattattaattgagatagaggagttaccaatagttcctgtaccaatgatcttgcc 19071613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 415
Target Start/End: Original strand, 19446953 - 19447014
Alignment:
Q  354 aaccatacatttttgatagagatagaagaattaccaatagttcatgtaccaataatcttgcc 415  Q
    ||||| ||||| || || |||||||| || ||||||||||||| ||||||||| ||||||||    
T  19446953 aaccacacattattaattgagatagaggagttaccaatagttcttgtaccaatgatcttgcc 19447014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.00000001; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 1118594 - 1118633
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  1118594 taacttgctaattttagaaattaatctccaattagcatgt 1118633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 5297834 - 5297873
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  5297834 taacttgctaattttagaaattaatctccaattagcatgt 5297873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 6979375 - 6979336
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  6979375 taacttgctaattttagaaattaatctccaattagcatgt 6979336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 9339524 - 9339485
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  9339524 taacttgctaattttagaaattaatctccaattagcatgt 9339485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 13530570 - 13530609
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||| |||||||| |||||||||||||||||||||    
T  13530570 taacttgctgagtttagagattaatctccaattagcatgt 13530609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 14033611 - 14033572
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  14033611 taacttgctaattttagaaattaatctccaattagcatgt 14033572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 14454304 - 14454343
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  14454304 taacttgctaattttagaaattaatctccaattagcatgt 14454343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 14565345 - 14565384
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  14565345 taacttgctaattttagaaattaatctccaattagcatgt 14565384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 15743538 - 15743499
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  15743538 taacttgctaattttagaaattaatctccaattagcatgt 15743499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 16000588 - 16000627
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  16000588 taacttgctaattttagaaattaatctccaattagcatgt 16000627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 17610631 - 17610592
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  17610631 taacttgctaattttagaaattaatctccaattagcatgt 17610592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 17722487 - 17722448
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  17722487 taacttgctaattttagaaattaatctccaattagcatgt 17722448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 20783614 - 20783575
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  20783614 taacttgctaattttagaaattaatctccaattagcatgt 20783575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 22150085 - 22150046
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  22150085 taacttgctaattttagaaattaatctccaattagcatgt 22150046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 22679685 - 22679646
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  22679685 taacttgctaattttagaaattaatctccaattagcatgt 22679646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 23299846 - 23299807
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  23299846 taacttgctaattttagaaattaatctccaattagcatgt 23299807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 23399481 - 23399442
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  23399481 taacttgctaattttagaaattaatctccaattagcatgt 23399442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 23700349 - 23700310
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  23700349 taacttgctaattttagaaattaatctccaattagcatgt 23700310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 24570657 - 24570618
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  24570657 taacttgctaattttagaaattaatctccaattagcatgt 24570618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 24811482 - 24811443
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  24811482 taacttgctaattttagaaattaatctccaattagcatgt 24811443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 24824168 - 24824207
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  24824168 taacttgctaattttagaaattaatctccaattagcatgt 24824207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 24943870 - 24943909
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  24943870 taacttgctaattttagaaattaatctccaattagcatgt 24943909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 27049529 - 27049568
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  27049529 taacttgctaattttagaaattaatctccaattagcatgt 27049568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 27463731 - 27463692
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  27463731 taacttgctaattttagaaattaatctccaattagcatgt 27463692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 27619464 - 27619503
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  27619464 taacttgctaattttagaaattaatctccaattagcatgt 27619503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 30234718 - 30234757
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  30234718 taacttgctaattttagaaattaatctccaattagcatgt 30234757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 31352103 - 31352064
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  31352103 taacttgctaattttagaaattaatctccaattagcatgt 31352064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 31837049 - 31837010
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  31837049 taacttgctaattttagaaattaatctccaattagcatgt 31837010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 34055502 - 34055463
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  34055502 taacttgctaattttagaaattaatctccaattagcatgt 34055463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 34775478 - 34775439
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  34775478 taacttgctaattttagaaattaatctccaattagcatgt 34775439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 35219072 - 35219033
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  35219072 taacttgctaattttagaaattaatctccaattagcatgt 35219033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 36589809 - 36589848
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  36589809 taacttgctaattttagaaattaatctccaattagcatgt 36589848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 36691267 - 36691228
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  36691267 taacttgctaattttagaaattaatctccaattagcatgt 36691228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 39356065 - 39356026
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  39356065 taacttgctaattttagaaattaatctccaattagcatgt 39356026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 39498179 - 39498218
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  39498179 taacttgctaattttagaaattaatctccaattagcatgt 39498218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 40393931 - 40393892
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  40393931 taacttgctaattttagaaattaatctccaattagcatgt 40393892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 42046349 - 42046310
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  42046349 taacttgctaattttagaaattaatctccaattagcatgt 42046310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 124
Target Start/End: Complemental strand, 19467541 - 19467503
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatg 124  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  19467541 taacttgctaattttagagattaatctccaattagcatg 19467503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 32; Significance: 0.00000001; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 3178934 - 3178973
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  3178934 taacttgctaattttagaaattaatctccaattagcatgt 3178973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 4174634 - 4174673
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  4174634 taacttgctaattttagaaattaatctccaattagcatgt 4174673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 5643196 - 5643157
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  5643196 taacttgctaattttagaaattaatctccaattagcatgt 5643157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 5840537 - 5840576
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  5840537 taacttgctaattttagaaattaatctccaattagcatgt 5840576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 7514607 - 7514646
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  7514607 taacttgctaattttagaaattaatctccaattagcatgt 7514646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 7692963 - 7692924
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  7692963 taacttgctaattttagaaattaatctccaattagcatgt 7692924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 12737861 - 12737900
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  12737861 taacttgctaattttagaaattaatctccaattagcatgt 12737900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 19163169 - 19163130
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  19163169 taacttgctaagtttagagattaatctccagttagcatgt 19163130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 19184538 - 19184577
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  19184538 taacttgctaattttagaaattaatctccaattagcatgt 19184577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 21870998 - 21871037
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  21870998 taacttgctaattttagaaattaatctccaattagcatgt 21871037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 35641529 - 35641490
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  35641529 taacttgctaattttagaaattaatctccaattagcatgt 35641490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 36239922 - 36239883
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  36239922 taacttgctaattttagaaattaatctccaattagcatgt 36239883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 38102418 - 38102457
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  38102418 taacttgctaattttagaaattaatctccaattagcatgt 38102457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 47611424 - 47611385
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  47611424 taacttgctaattttagaaattaatctccaattagcatgt 47611385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 51649365 - 51649326
Alignment:
Q  86 taacttgctaagtttagatattaatctccaattagcatgt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  51649365 taacttgctaattttagaaattaatctccaattagcatgt 51649326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 414
Target Start/End: Original strand, 17718756 - 17718810
Alignment:
Q  360 acatttttgatagagatagaagaattaccaatagttcatgtaccaataatcttgc 414  Q
    ||||| || ||||||||||| || ||||||||| ||||||||||||| |||||||    
T  17718756 acattattaatagagatagaggagttaccaataattcatgtaccaatgatcttgc 17718810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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