View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11207_low_23 (Length: 430)
Name: NF11207_low_23
Description: NF11207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11207_low_23 |
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Alignment Details
Target: chr8 (Bit Score: 395; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 1 - 411
Target Start/End: Complemental strand, 32653620 - 32653210
Alignment:
| Q |
1 |
agattcttgacatttaagttattatgtaatagttgcttccaatttggagacaacaggtaatcattttataggttatgtaatgtttctttgggtctaagtc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32653620 |
agattcttgacatttaagttattatgtaatagttgcttccaatttggagacaacaggtaatcattttataggttatgtaatgtttctttgggtctaagtc |
32653521 |
T |
|
| Q |
101 |
taaattccaaccttcaaaccataacgcatgttgttgatatcttcatgattaagtgaagctccttctggcttcattttggttaaagacaattgttcttcct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32653520 |
taaattccaaccttcaaaccataacgcatgttgttgatatcttcatgattaagtgaagctccttctggcttcattttggttaaagacaattgttcttcct |
32653421 |
T |
|
| Q |
201 |
gtaagtcaagataaacattatcctaacgtgcaagggagaacataaagaaggaaagttttactaaattacatcatgttgtttagtataacgttgatacata |
300 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32653420 |
gtaagtcaagataaacattatcctaacgtgcaagggtgaacataaagaaggaaagttttactaaattacatcatgttgtttagtataacgttgatacata |
32653321 |
T |
|
| Q |
301 |
tgactagtaataattgtagatcacgactacaagtctacaactatgcagcatctcaccctgagtatatcctgtgcgtccctgttatcatgtagaaatttta |
400 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |
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| T |
32653320 |
tgactagtaataattgtagatcacaactacaagtctacaactatgcagcatctcaccctgagtatatcctgtgcgtccctgttgtcatttagaaatttta |
32653221 |
T |
|
| Q |
401 |
cactccacatc |
411 |
Q |
| |
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||||||||||| |
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| T |
32653220 |
cactccacatc |
32653210 |
T |
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