View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1120_high_1 (Length: 751)

Name: NF1120_high_1
Description: NF1120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1120_high_1
NF1120_high_1
[»] chr5 (13 HSPs)
chr5 (279-751)||(6587159-6587631)
chr5 (253-311)||(37526225-37526283)
chr5 (253-311)||(37588386-37588444)
chr5 (279-315)||(10272483-10272519)
chr5 (253-333)||(12425535-12425615)
chr5 (253-333)||(9202774-9202854)
chr5 (279-310)||(2568645-2568676)
chr5 (253-311)||(37690662-37690721)
chr5 (280-315)||(37914735-37914770)
chr5 (279-313)||(13244534-13244568)
chr5 (253-315)||(39105446-39105508)
chr5 (253-315)||(41957477-41957539)
chr5 (282-315)||(5559707-5559740)
[»] chr4 (13 HSPs)
chr4 (32-248)||(8468574-8468790)
chr4 (277-333)||(25885823-25885879)
chr4 (252-315)||(8468930-8468993)
chr4 (253-317)||(53943586-53943650)
chr4 (253-312)||(7694036-7694095)
chr4 (279-314)||(35571683-35571718)
chr4 (257-304)||(42866061-42866108)
chr4 (281-332)||(47946163-47946214)
chr4 (280-318)||(1706601-1706639)
chr4 (279-333)||(17884032-17884086)
chr4 (280-326)||(27043883-27043929)
chr4 (280-313)||(2465972-2466005)
chr4 (279-312)||(30207623-30207656)
[»] chr3 (14 HSPs)
chr3 (253-311)||(14548747-14548805)
chr3 (279-333)||(25447296-25447350)
chr3 (279-333)||(37788824-37788878)
chr3 (279-332)||(14145877-14145930)
chr3 (253-326)||(21367638-21367711)
chr3 (253-333)||(20170487-20170567)
chr3 (253-315)||(2318626-2318689)
chr3 (254-333)||(30956653-30956732)
chr3 (254-333)||(30972465-30972544)
chr3 (279-333)||(10101528-10101582)
chr3 (279-333)||(10212453-10212507)
chr3 (279-313)||(41057022-41057056)
chr3 (269-310)||(32109352-32109393)
chr3 (282-315)||(35450572-35450605)
[»] chr6 (8 HSPs)
chr6 (253-333)||(9093582-9093662)
chr6 (257-315)||(415286-415344)
chr6 (253-312)||(1275134-1275193)
chr6 (279-326)||(7485120-7485167)
chr6 (280-326)||(6909925-6909971)
chr6 (279-333)||(33828610-33828664)
chr6 (253-310)||(2117390-2117447)
chr6 (280-333)||(20671918-20671971)
[»] chr1 (23 HSPs)
chr1 (253-333)||(49888731-49888811)
chr1 (279-333)||(30371112-30371166)
chr1 (277-333)||(36070214-36070270)
chr1 (277-312)||(15515526-15515561)
chr1 (253-315)||(7218100-7218162)
chr1 (253-326)||(473135-473208)
chr1 (254-311)||(49282901-49282958)
chr1 (253-333)||(5592711-5592791)
chr1 (279-315)||(7244710-7244746)
chr1 (283-315)||(11218001-11218033)
chr1 (279-315)||(25006086-25006122)
chr1 (280-324)||(37295771-37295815)
chr1 (253-332)||(24915077-24915156)
chr1 (279-326)||(34952186-34952233)
chr1 (253-312)||(35017561-35017620)
chr1 (257-315)||(15361695-15361753)
chr1 (279-313)||(25005849-25005883)
chr1 (279-333)||(27738232-27738286)
chr1 (279-333)||(37842407-37842461)
chr1 (280-333)||(1432479-1432532)
chr1 (279-312)||(12564926-12564959)
chr1 (280-313)||(33976163-33976196)
chr1 (253-310)||(35179126-35179183)
[»] chr7 (15 HSPs)
chr7 (279-333)||(39967884-39967938)
chr7 (253-315)||(38010696-38010758)
chr7 (253-315)||(44821941-44822003)
chr7 (285-333)||(30180015-30180063)
chr7 (277-333)||(34083575-34083631)
chr7 (279-333)||(1417228-1417282)
chr7 (277-315)||(5569686-5569724)
chr7 (272-310)||(25507336-25507374)
chr7 (279-309)||(28076545-28076575)
chr7 (253-315)||(30812130-30812192)
chr7 (279-332)||(12110325-12110378)
chr7 (254-315)||(24895338-24895399)
chr7 (254-315)||(24909646-24909707)
chr7 (277-310)||(25558241-25558274)
chr7 (277-310)||(25558439-25558472)
[»] chr2 (15 HSPs)
chr2 (253-333)||(11513862-11513942)
chr2 (260-312)||(40158703-40158755)
chr2 (279-326)||(1625871-1625918)
chr2 (253-315)||(22681211-22681273)
chr2 (280-333)||(43199378-43199431)
chr2 (282-326)||(9750917-9750961)
chr2 (279-326)||(18066099-18066146)
chr2 (253-304)||(42621401-42621452)
chr2 (283-326)||(42907330-42907373)
chr2 (279-333)||(2360388-2360442)
chr2 (253-315)||(6167309-6167371)
chr2 (277-315)||(35755552-35755590)
chr2 (277-318)||(1646993-1647034)
chr2 (278-315)||(23143029-23143066)
chr2 (278-315)||(23554819-23554856)
[»] chr8 (11 HSPs)
chr8 (253-315)||(12361174-12361236)
chr8 (279-315)||(9834841-9834877)
chr8 (279-315)||(24558835-24558871)
chr8 (253-309)||(31705073-31705129)
chr8 (254-333)||(30627929-30628008)
chr8 (279-333)||(16733993-16734047)
chr8 (253-303)||(29973075-29973125)
chr8 (253-307)||(31862483-31862537)
chr8 (279-333)||(34770856-34770910)
chr8 (279-332)||(2595049-2595102)
chr8 (253-318)||(39268530-39268595)
[»] scaffold0475 (1 HSPs)
scaffold0475 (286-315)||(11814-11843)


Alignment Details
Target: chr5 (Bit Score: 461; Significance: 0; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 461; E-Value: 0
Query Start/End: Original strand, 279 - 751
Target Start/End: Original strand, 6587159 - 6587631
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatctttaccgatcacttcactgtcgattacagtagcagaaaaaataaaggt 378  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6587159 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatctttaccgatcacttcactgtcgattacagtagcagaaaaaataaaggt 6587258  T
Q  379 atacataaacatcatagaataagattgaagaacaagtaaagatttgaaatagttacctccaatgctcttttatcctcgcgatacaaactgctctatttcc 478  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6587259 atacataaacatcatagaataagattgaagaacaagtaaagatttgaaatagttacctccaatgctcttttatcctcgcgatacaaactgctctatttcc 6587358  T
Q  479 tgtaagcctcaaaccatgtttccgcaaatacgctttgcattcgtttaatttcaacgaatctatatcctttccacctgagaaatcgaatactgaattcaat 578  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6587359 tgtaagcctcaaaccatgtttccgcaaatacgctttgcattcgtttaatttcaacgaatctatatcctttccacctgagaaatcgaatactgaattcaaa 6587458  T
Q  579 aaacatgatcgattcgatacattattgttaatttacaattgatgatttggtagaaataaaaaccttgaaggagagaaacaacttttttggagagagattc 678  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6587459 taacatgatcgattcgatacattattgttaatttacaattgatgatttggtagaaataaaaaccttgaaggagagaaacaactttttcggagagagattc 6587558  T
Q  679 gtcatcaacatcacaattatctgatcccgaagcttcatcgcgatcttcttcatcatcttcctcatcttcaatt 751  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6587559 gtcatcaacatcacaattatctgatcccgaagcttcatcgcgatcttcttcatcatcttcctcatcttcaatt 6587631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 253 - 311
Target Start/End: Original strand, 37526225 - 37526283
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaac 311  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||    
T  37526225 ttatttccataagctctccagaacaacttatgaaaacaacttatagcttatatgaaaac 37526283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 253 - 311
Target Start/End: Original strand, 37588386 - 37588444
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaac 311  Q
    ||||||||||||| |||| |||| |||||||||||||||||||||||||||| ||||||    
T  37588386 ttatttccataagctctccagaataacttatgaaaacaacttatagcttatatgaaaac 37588444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 315
Target Start/End: Original strand, 10272483 - 10272519
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaatt 315  Q
    |||||||||||||||||||||||||||||||||||||    
T  10272483 cttatgaaaacaacttatagcttatacgaaaacaatt 10272519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 333
Target Start/End: Complemental strand, 12425615 - 12425535
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    |||||| ||||||||||| |  | | ||| |||||||| |||||||||||||||||||||||| || ||||||| ||||||    
T  12425615 ttattttcataagttctccaagatagcttgtgaaaacagcttatagcttatacgaaaacaatttaactttattttatcttt 12425535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 253 - 333
Target Start/End: Original strand, 9202774 - 9202854
Alignment:
Q  253 ttatttccataagttct-caagaacaacttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    |||||| |||||||||| |||||  |||||||||||||| ||||| ||||||| |||||||||| || ||||||| ||||||    
T  9202774 ttattttcataagttcttcaagat-aacttatgaaaacagcttattgcttatatgaaaacaatttaactttattttatcttt 9202854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 310
Target Start/End: Complemental strand, 2568676 - 2568645
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaa 310  Q
    ||||||||||||||||||||||||||||||||    
T  2568676 cttatgaaaacaacttatagcttatacgaaaa 2568645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 253 - 311
Target Start/End: Original strand, 37690662 - 37690721
Alignment:
Q  253 ttatttccataagttctcaagaacaactt-atgaaaacaacttatagcttatacgaaaac 311  Q
    ||||||||||||| |||| | || ||||| ||||||||||||||||||||||| ||||||    
T  37690662 ttatttccataagctctccataataactttatgaaaacaacttatagcttatatgaaaac 37690721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 315
Target Start/End: Complemental strand, 37914770 - 37914735
Alignment:
Q  280 ttatgaaaacaacttatagcttatacgaaaacaatt 315  Q
    |||||||||||| |||||||||||||||||||||||    
T  37914770 ttatgaaaacaatttatagcttatacgaaaacaatt 37914735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 279 - 313
Target Start/End: Original strand, 13244534 - 13244568
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaa 313  Q
    |||||||||||||||||||| ||||||||||||||    
T  13244534 cttatgaaaacaacttatagtttatacgaaaacaa 13244568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 315
Target Start/End: Complemental strand, 39105508 - 39105446
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaatt 315  Q
    |||||| ||||||||||| |  | | ||||||||||||  |||||||||||||||||||||||    
T  39105508 ttattttcataagttctccaagatagcttatgaaaacagattatagcttatacgaaaacaatt 39105446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 315
Target Start/End: Original strand, 41957477 - 41957539
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaatt 315  Q
    |||||| |||||||||||||| | | |||||||||||| |||||| |||| | ||||||||||    
T  41957477 ttattttcataagttctcaaggatagcttatgaaaacagcttataacttacatgaaaacaatt 41957539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 282 - 315
Target Start/End: Complemental strand, 5559740 - 5559707
Alignment:
Q  282 atgaaaacaacttatagcttatacgaaaacaatt 315  Q
    |||||||||||||||||||||||| |||||||||    
T  5559740 atgaaaacaacttatagcttatactaaaacaatt 5559707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 181; Significance: 2e-97; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 32 - 248
Target Start/End: Original strand, 8468574 - 8468790
Alignment:
Q  32 tttcttatttttatgactggaactcttagatatcggcacatgaagacttctcgaaaccctatctcgaggtttgcgcaagtgtttgtgtcttcgatgaaga 131  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||| ||||| ||||||||||| |||||||    
T  8468574 tttctcatttttatgactggaactctcagatatcggcagatgaagacgtctcgaaaccctatctcgaggtttgcacaagtttttgtgtcttcaatgaaga 8468673  T
Q  132 aaataaaatttcaattacctgcaaatggagaaggtctctatgatgttcaagaagggagtgatccaagtgttaggagaatgcatcacactaagggcctcag 231  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8468674 aaataaaatttcaagtacctgcaaatggagaaggtctctatgatgttcaagaagggagtgatccaagtgttaggagaatgcatcacactaagggcctcag 8468773  T
Q  232 gtacgtgttttaagttc 248  Q
    ||| |||||||||||||    
T  8468774 gtaagtgttttaagttc 8468790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 25885879 - 25885823
Alignment:
Q  277 aacttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    |||||||||||||||||||||||||| |||||||||||| || ||||||| ||||||    
T  25885879 aacttatgaaaacaacttatagcttacacgaaaacaatttaactttattttatcttt 25885823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 252 - 315
Target Start/End: Complemental strand, 8468993 - 8468930
Alignment:
Q  252 attatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaatt 315  Q
    ||||||| |||||| |||| |||| ||||||||||||||||| |||||||||| ||||| ||||    
T  8468993 attattttcataagctctctagaataacttatgaaaacaactaatagcttatatgaaaaaaatt 8468930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 317
Target Start/End: Complemental strand, 53943650 - 53943586
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaattga 317  Q
    ||||||||||||| |||| |  |||||||||| ||||||||||||| ||||| ||||||| ||||    
T  53943650 ttatttccataagctctccatgacaacttatgtaaacaacttatagtttatatgaaaacagttga 53943586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 253 - 312
Target Start/End: Original strand, 7694036 - 7694095
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaaca 312  Q
    ||||||||||||  |||| || | |||||||||||||| |||||||||||||| ||||||    
T  7694036 ttatttccataaactctccaggataacttatgaaaacagcttatagcttatacaaaaaca 7694095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 314
Target Start/End: Original strand, 35571683 - 35571718
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaat 314  Q
    |||||||||||| |||||||||||||||||||||||    
T  35571683 cttatgaaaacagcttatagcttatacgaaaacaat 35571718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 257 - 304
Target Start/End: Complemental strand, 42866108 - 42866061
Alignment:
Q  257 ttccataagttctcaagaacaacttatgaaaacaacttatagcttata 304  Q
    ||||||||| ||||||| | | ||||||||||||||||||||||||||    
T  42866108 ttccataagctctcaaggatagcttatgaaaacaacttatagcttata 42866061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 47946214 - 47946163
Alignment:
Q  281 tatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatctt 332  Q
    ||||||||||| ||||||||||||||||||||||| || || |||| |||||    
T  47946214 tatgaaaacaatttatagcttatacgaaaacaatttaacttcattttatctt 47946163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 280 - 318
Target Start/End: Complemental strand, 1706639 - 1706601
Alignment:
Q  280 ttatgaaaacaacttatagcttatacgaaaacaattgaa 318  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  1706639 ttatgaaaacagcttatagcttctacgaaaacaattgaa 1706601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 279 - 333
Target Start/End: Complemental strand, 17884086 - 17884032
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    ||||||||||||||| ||| ||||||| ||||||||| || ||||||| ||||||    
T  17884086 cttatgaaaacaactgataacttatacaaaaacaatttaactttattttatcttt 17884032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 27043883 - 27043929
Alignment:
Q  280 ttatgaaaacaacttatagcttatacgaaaacaattgaagtttattt 326  Q
    |||| |||||| |||||||||||||||||||||||| || |||||||    
T  27043883 ttataaaaacatcttatagcttatacgaaaacaatttaactttattt 27043929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 280 - 313
Target Start/End: Original strand, 2465972 - 2466005
Alignment:
Q  280 ttatgaaaacaacttatagcttatacgaaaacaa 313  Q
    |||||||||||||||||||||||||| |||||||    
T  2465972 ttatgaaaacaacttatagcttatacaaaaacaa 2466005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 279 - 312
Target Start/End: Original strand, 30207623 - 30207656
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaaca 312  Q
    |||||||||||||||||||||||||| |||||||    
T  30207623 cttatgaaaacaacttatagcttatatgaaaaca 30207656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 253 - 311
Target Start/End: Original strand, 14548747 - 14548805
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaac 311  Q
    ||||||||||||| |||| |||| |||||||||||||||||||||||||||| ||||||    
T  14548747 ttatttccataagctctccagaataacttatgaaaacaacttatagcttatatgaaaac 14548805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 279 - 333
Target Start/End: Original strand, 25447296 - 25447350
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    ||||||||||||  ||||||||||||| ||||||||| |||||||||| ||||||    
T  25447296 cttatgaaaacagtttatagcttatacaaaaacaatttaagtttattttatcttt 25447350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 279 - 333
Target Start/End: Complemental strand, 37788878 - 37788824
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    |||||||||||||||||||| ||||||||||| ||||| | ||||||| ||||||    
T  37788878 cttatgaaaacaacttatagattatacgaaaataattggactttattttatcttt 37788824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 14145930 - 14145877
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatctt 332  Q
    |||||||||| |||||||||| ||||||||||||||| || ||||||| |||||    
T  14145930 cttatgaaaataacttatagcatatacgaaaacaatttaactttattttatctt 14145877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 253 - 326
Target Start/End: Complemental strand, 21367711 - 21367638
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaattgaagtttattt 326  Q
    |||||| ||||||||||| |  | | |||||||||||||||||||  |||||||||||||||| || |||||||    
T  21367711 ttattttcataagttctccaagatagcttatgaaaacaacttatacattatacgaaaacaatttaactttattt 21367638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 333
Target Start/End: Complemental strand, 20170567 - 20170487
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    |||||| ||| ||||||||| || ||||| | ||||||||||||||| ||||| ||||||||| ||  |||||| ||||||    
T  20170567 ttattttcattagttctcaaaaataacttgtaaaaacaacttatagcatatacaaaaacaatttaacattattttatcttt 20170487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 253 - 315
Target Start/End: Complemental strand, 2318689 - 2318626
Alignment:
Q  253 ttatttccataagttctc-aagaacaacttatgaaaacaacttatagcttatacgaaaacaatt 315  Q
    ||||||| ||||| |||| ||||| ||||||| |||||||||||||| ||||| ||||||||||    
T  2318689 ttatttctataagctctccaagaataacttataaaaacaacttatagtttatatgaaaacaatt 2318626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 254 - 333
Target Start/End: Original strand, 30956653 - 30956732
Alignment:
Q  254 tatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    |||| |||||||||||| |  | | ||| ||||||||||||||||| ||||| ||||||||| || ||||||| ||||||    
T  30956653 tattcccataagttctccaagatagcttttgaaaacaacttatagcctatacaaaaacaatttaactttattttatcttt 30956732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 254 - 333
Target Start/End: Original strand, 30972465 - 30972544
Alignment:
Q  254 tatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    |||| |||||||||||| |  | | ||| ||||||||||||||||| ||||| ||||||||| || ||||||| ||||||    
T  30972465 tattcccataagttctccaagatagcttttgaaaacaacttatagcctatacaaaaacaatttaactttattttatcttt 30972544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 279 - 333
Target Start/End: Original strand, 10101528 - 10101582
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    |||||||||||||||| || |||||| |||||||||| || ||||||| ||||||    
T  10101528 cttatgaaaacaacttttatcttatatgaaaacaatttaactttattttatcttt 10101582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 279 - 333
Target Start/End: Original strand, 10212453 - 10212507
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    |||||||||||||||| || |||||| |||||||||| || ||||||| ||||||    
T  10212453 cttatgaaaacaacttttatcttatatgaaaacaatttaactttattttatcttt 10212507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 279 - 313
Target Start/End: Complemental strand, 41057056 - 41057022
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaa 313  Q
    |||||||||||||||||||||||||| ||||||||    
T  41057056 cttatgaaaacaacttatagcttatatgaaaacaa 41057022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 269 - 310
Target Start/End: Original strand, 32109352 - 32109393
Alignment:
Q  269 tcaagaacaacttatgaaaacaacttatagcttatacgaaaa 310  Q
    ||||| ||||||||||||||||||||||||||| || |||||    
T  32109352 tcaaggacaacttatgaaaacaacttatagcttgtatgaaaa 32109393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 282 - 315
Target Start/End: Complemental strand, 35450605 - 35450572
Alignment:
Q  282 atgaaaacaacttatagcttatacgaaaacaatt 315  Q
    ||||||||||||||||||||||| ||||||||||    
T  35450605 atgaaaacaacttatagcttataagaaaacaatt 35450572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 253 - 333
Target Start/End: Original strand, 9093582 - 9093662
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    |||||| | ||||||||| |  ||| |||||||||||| |||||||||||||||||||||||| || ||||||| ||||||    
T  9093582 ttattttcttaagttctctaagacagcttatgaaaacagcttatagcttatacgaaaacaatttaactttattttatcttt 9093662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 257 - 315
Target Start/End: Complemental strand, 415344 - 415286
Alignment:
Q  257 ttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaatt 315  Q
    |||||||||||||| |  | | ||||| |||||||||||||||||||||||||||||||    
T  415344 ttccataagttctccactatagcttataaaaacaacttatagcttatacgaaaacaatt 415286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 253 - 312
Target Start/End: Complemental strand, 1275193 - 1275134
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaaca 312  Q
    ||||||||||||| |||| || | ||| |||||||||| ||||||||||||| |||||||    
T  1275193 ttatttccataagctctccaggataacatatgaaaacagcttatagcttatatgaaaaca 1275134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 326
Target Start/End: Original strand, 7485120 - 7485167
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttattt 326  Q
    |||||||||||||||||||||||||| ||||| |||| || |||||||    
T  7485120 cttatgaaaacaacttatagcttatatgaaaaaaatttaactttattt 7485167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 6909925 - 6909971
Alignment:
Q  280 ttatgaaaacaacttatagcttatacgaaaacaattgaagtttattt 326  Q
    |||||||||||||||||||| ||||| ||||||||| || |||||||    
T  6909925 ttatgaaaacaacttatagcatatacaaaaacaatttaactttattt 6909971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 279 - 333
Target Start/End: Complemental strand, 33828664 - 33828610
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    ||||| ||||||||||||| |||||||||||||||||  | ||||||||| ||||    
T  33828664 cttattaaaacaacttataacttatacgaaaacaatttgactttatttaaccttt 33828610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 253 - 310
Target Start/End: Complemental strand, 2117447 - 2117390
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaa 310  Q
    ||||||| ||||| |||| || | |||||||||||||||||||||| ||||| |||||    
T  2117447 ttatttcaataagctctctaggataacttatgaaaacaacttatagattatatgaaaa 2117390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 280 - 333
Target Start/End: Original strand, 20671918 - 20671971
Alignment:
Q  280 ttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    |||||||||||| ||| |||||||||||||||||||  | ||||||| ||||||    
T  20671918 ttatgaaaacaatttaaagcttatacgaaaacaatttgactttattttatcttt 20671971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 253 - 333
Target Start/End: Complemental strand, 49888811 - 49888731
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    |||||| ||||||||||| |  | | ||||||||||||||| ||||||||||||||||||||| || ||||||| ||||||    
T  49888811 ttattttcataagttctctaagatagcttatgaaaacaactaatagcttatacgaaaacaattaaactttattttatcttt 49888731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 279 - 333
Target Start/End: Complemental strand, 30371166 - 30371112
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    |||||||||||||||||||||||||| ||||||||||  ||||||||| ||||||    
T  30371166 cttatgaaaacaacttatagcttatatgaaaacaatttgagtttattttatcttt 30371112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 36070270 - 36070214
Alignment:
Q  277 aacttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    ||||||||||||||||||||||||||| |||| |||||| || ||||||| ||||||    
T  36070270 aacttatgaaaacaacttatagcttatccgaagacaatttaactttattttatcttt 36070214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 277 - 312
Target Start/End: Complemental strand, 15515561 - 15515526
Alignment:
Q  277 aacttatgaaaacaacttatagcttatacgaaaaca 312  Q
    ||||||||||||||||||||||||||||||||||||    
T  15515561 aacttatgaaaacaacttatagcttatacgaaaaca 15515526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 315
Target Start/End: Original strand, 7218100 - 7218162
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaatt 315  Q
    |||||| ||||||||||| || | |  ||||||||||||||||||||||||| ||||||||||    
T  7218100 ttattttcataagttctccaggataggttatgaaaacaacttatagcttatatgaaaacaatt 7218162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 253 - 326
Target Start/End: Complemental strand, 473208 - 473135
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaattgaagtttattt 326  Q
    |||||| ||||||||||| |  | ||||||| ||||||||||||||| || |||||||||||| || |||||||    
T  473208 ttattttcataagttctccaatagaacttataaaaacaacttatagcatacacgaaaacaatttaactttattt 473135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 254 - 311
Target Start/End: Original strand, 49282901 - 49282958
Alignment:
Q  254 tatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaac 311  Q
    |||||||||||  ||||||||||| |||||||||||||||| |||||| |||| ||||    
T  49282901 tatttccataatctctcaagaacagcttatgaaaacaacttgtagcttctacgtaaac 49282958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 333
Target Start/End: Original strand, 5592711 - 5592791
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    |||||| |||||| ||| ||||  | |||||||||||||||||||||||||| || |||||||  | ||||||| ||||||    
T  5592711 ttattttcataagctcttaagactagcttatgaaaacaacttatagcttatatgacaacaattcgactttattttatcttt 5592791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 315
Target Start/End: Original strand, 7244710 - 7244746
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaatt 315  Q
    |||||||||||||| ||||||||||||||||||||||    
T  7244710 cttatgaaaacaacgtatagcttatacgaaaacaatt 7244746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 11218001 - 11218033
Alignment:
Q  283 tgaaaacaacttatagcttatacgaaaacaatt 315  Q
    |||||||||||||||||||||||||||||||||    
T  11218001 tgaaaacaacttatagcttatacgaaaacaatt 11218033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 315
Target Start/End: Original strand, 25006086 - 25006122
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaatt 315  Q
    |||||||||||||||||||||||||| ||||||||||    
T  25006086 cttatgaaaacaacttatagcttatatgaaaacaatt 25006122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 280 - 324
Target Start/End: Original strand, 37295771 - 37295815
Alignment:
Q  280 ttatgaaaacaacttatagcttatacgaaaacaattgaagtttat 324  Q
    ||||||||||||||||||||||| |||||||||||| || |||||    
T  37295771 ttatgaaaacaacttatagcttaaacgaaaacaatttaactttat 37295815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 24915077 - 24915156
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatctt 332  Q
    |||||| || |||||||| |  ||| |||||||||||| |||||||| ||||| ||||||||| || ||||||| |||||    
T  24915077 ttattttcacaagttctccaagacagcttatgaaaacagcttatagcatatacaaaaacaatttaactttattttatctt 24915156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 326
Target Start/End: Complemental strand, 34952233 - 34952186
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttattt 326  Q
    ||||||||||||||||| ||||||| ||||||||||| || |||||||    
T  34952233 cttatgaaaacaacttacagcttattcgaaaacaatttaactttattt 34952186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 253 - 312
Target Start/End: Complemental strand, 35017620 - 35017561
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaaca 312  Q
    ||||||||||||| |||| || ||| |||||||||||| | ||||| |||||||||||||    
T  35017620 ttatttccataagctctccaggacagcttatgaaaacagcatatagattatacgaaaaca 35017561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 257 - 315
Target Start/End: Complemental strand, 15361753 - 15361695
Alignment:
Q  257 ttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaatt 315  Q
    ||||||||  ||||||||| | |||||||||||| ||||||||||||| ||||| ||||    
T  15361753 ttccataaactctcaagaatatcttatgaaaacagcttatagcttatatgaaaataatt 15361695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 279 - 313
Target Start/End: Original strand, 25005849 - 25005883
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaa 313  Q
    |||||||||||||||||||||||||| ||||||||    
T  25005849 cttatgaaaacaacttatagcttatatgaaaacaa 25005883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 279 - 333
Target Start/End: Original strand, 27738232 - 27738286
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    ||||||||||||| |||||||||||| ||||||||||  | ||||||| ||||||    
T  27738232 cttatgaaaacaaattatagcttatatgaaaacaatttgactttattttatcttt 27738286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 279 - 333
Target Start/End: Original strand, 37842407 - 37842461
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    ||||||||||||||||||||||||| |||| ||| || || ||||||| ||||||    
T  37842407 cttatgaaaacaacttatagcttattcgaacacagtttaactttatttcatcttt 37842461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 280 - 333
Target Start/End: Complemental strand, 1432532 - 1432479
Alignment:
Q  280 ttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    |||||||||||| ||||||||||||  |||||||||||| | ||||| ||||||    
T  1432532 ttatgaaaacaatttatagcttataaaaaaacaattgaactctattttatcttt 1432479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 279 - 312
Target Start/End: Original strand, 12564926 - 12564959
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaaca 312  Q
    |||||||||||||||||||||||||| |||||||    
T  12564926 cttatgaaaacaacttatagcttatatgaaaaca 12564959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 280 - 313
Target Start/End: Complemental strand, 33976196 - 33976163
Alignment:
Q  280 ttatgaaaacaacttatagcttatacgaaaacaa 313  Q
    |||||||||||||||||| |||||||||||||||    
T  33976196 ttatgaaaacaacttataacttatacgaaaacaa 33976163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 253 - 310
Target Start/End: Complemental strand, 35179183 - 35179126
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaa 310  Q
    |||||| ||||||||||| | || |||||||||||||| |||||| |||| |||||||    
T  35179183 ttattttcataagttctccataataacttatgaaaacagcttataacttaaacgaaaa 35179126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.000000000001; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 279 - 333
Target Start/End: Complemental strand, 39967938 - 39967884
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    ||||||||||||||||||||||  ||||||||||||| |||||||||| ||||||    
T  39967938 cttatgaaaacaacttatagctagtacgaaaacaatttaagtttattttatcttt 39967884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 315
Target Start/End: Complemental strand, 38010758 - 38010696
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaatt 315  Q
    |||||||||||||||||| || | |  ||||||||||| ||||||||||||| ||||||||||    
T  38010758 ttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatt 38010696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 315
Target Start/End: Complemental strand, 44822003 - 44821941
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaatt 315  Q
    |||||| ||||||||||| |||| | |||||||||||| |||||| ||||||| |||||||||    
T  44822003 ttattttcataagttctccagaatagcttatgaaaacagcttataacttatacaaaaacaatt 44821941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 285 - 333
Target Start/End: Complemental strand, 30180063 - 30180015
Alignment:
Q  285 aaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    |||||| |||||||||||||||||||||||| || ||||||| ||||||    
T  30180063 aaaacagcttatagcttatacgaaaacaatttaactttattttatcttt 30180015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 34083575 - 34083631
Alignment:
Q  277 aacttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    |||||||||||||| ||||||||||||||  |||||||| || ||||||| ||||||    
T  34083575 aacttatgaaaacagcttatagcttatacacaaacaatttaactttattttatcttt 34083631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 279 - 333
Target Start/End: Complemental strand, 1417282 - 1417228
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    |||||||||||||||||| ||||||| ||||||||||  | ||||||| ||||||    
T  1417282 cttatgaaaacaacttattgcttatatgaaaacaatttgactttattttatcttt 1417228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 277 - 315
Target Start/End: Original strand, 5569686 - 5569724
Alignment:
Q  277 aacttatgaaaacaacttatagcttatacgaaaacaatt 315  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  5569686 aacttatgaaaacaacttataacttataccaaaacaatt 5569724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 272 - 310
Target Start/End: Complemental strand, 25507374 - 25507336
Alignment:
Q  272 agaacaacttatgaaaacaacttatagcttatacgaaaa 310  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  25507374 agaataacttatgaaaacaacttatagcttatatgaaaa 25507336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 279 - 309
Target Start/End: Complemental strand, 28076575 - 28076545
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaa 309  Q
    |||||||||||||||||||||||||||||||    
T  28076575 cttatgaaaacaacttatagcttatacgaaa 28076545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 315
Target Start/End: Complemental strand, 30812192 - 30812130
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaatt 315  Q
    ||||||||||||| |||| |  | | || ||||||||| ||||||||||||||||||||||||    
T  30812192 ttatttccataagctctccatgatagctaatgaaaacagcttatagcttatacgaaaacaatt 30812130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 12110378 - 12110325
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatctt 332  Q
    |||||||||||| |||||||||||||| |||||||||  | ||||||| |||||    
T  12110378 cttatgaaaacagcttatagcttataccaaaacaatttgactttattttatctt 12110325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 254 - 315
Target Start/End: Complemental strand, 24895399 - 24895338
Alignment:
Q  254 tatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaatt 315  Q
    |||||||||||| |||| | || | ||| |||||||||||||||||||||| ||||| ||||    
T  24895399 tatttccataagctctccacaatatcttgtgaaaacaacttatagcttatatgaaaataatt 24895338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 254 - 315
Target Start/End: Complemental strand, 24909707 - 24909646
Alignment:
Q  254 tatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaatt 315  Q
    |||||||| ||| |||| | || | |||||||||||||||||||||||||| ||||| ||||    
T  24909707 tatttccacaagctctccacaatatcttatgaaaacaacttatagcttatatgaaaataatt 24909646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 277 - 310
Target Start/End: Original strand, 25558241 - 25558274
Alignment:
Q  277 aacttatgaaaacaacttatagcttatacgaaaa 310  Q
    |||||||||||||||||||||||||||| |||||    
T  25558241 aacttatgaaaacaacttatagcttatatgaaaa 25558274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 277 - 310
Target Start/End: Original strand, 25558439 - 25558472
Alignment:
Q  277 aacttatgaaaacaacttatagcttatacgaaaa 310  Q
    |||||||||||||||||||||||||||| |||||    
T  25558439 aacttatgaaaacaacttatagcttatatgaaaa 25558472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000002; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 333
Target Start/End: Complemental strand, 11513942 - 11513862
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    ||||||||| |||||||| |  | | |||||||||||||||||||||||||| ||||||||||  | ||||||| ||||||    
T  11513942 ttatttccaaaagttctccatgatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttattttatcttt 11513862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 260 - 312
Target Start/End: Complemental strand, 40158755 - 40158703
Alignment:
Q  260 cataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaaca 312  Q
    |||||| |||| |||| |||||||||||||||||||| |||||||||||||||    
T  40158755 cataagctctccagaataacttatgaaaacaacttattgcttatacgaaaaca 40158703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 279 - 326
Target Start/End: Complemental strand, 1625918 - 1625871
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttattt 326  Q
    ||||||||||||||||||| ||||||||||||||||| || |||||||    
T  1625918 cttatgaaaacaacttataacttatacgaaaacaatttaactttattt 1625871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 315
Target Start/End: Original strand, 22681211 - 22681273
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaatt 315  Q
    |||||||||||||||||| || | |  ||||||||||| ||||||||||||| ||||||||||    
T  22681211 ttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatt 22681273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 333
Target Start/End: Complemental strand, 43199431 - 43199378
Alignment:
Q  280 ttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    ||||||||||||||||||||||||||||| | |||| || ||||||| ||||||    
T  43199431 ttatgaaaacaacttatagcttatacgaagataatttaactttattttatcttt 43199378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 9750961 - 9750917
Alignment:
Q  282 atgaaaacaacttatagcttatacgaaaacaattgaagtttattt 326  Q
    ||||||||||||||||||||||| |||||||||| || |||||||    
T  9750961 atgaaaacaacttatagcttataagaaaacaatttaactttattt 9750917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 326
Target Start/End: Complemental strand, 18066146 - 18066099
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttattt 326  Q
    |||||||||||| ||||||||||||| |||||||||| || |||||||    
T  18066146 cttatgaaaacagcttatagcttatatgaaaacaatttaactttattt 18066099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 253 - 304
Target Start/End: Original strand, 42621401 - 42621452
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttata 304  Q
    |||||| || |||||||| |||| |||||||||||||| |||||||||||||    
T  42621401 ttattttcacaagttctccagaataacttatgaaaacagcttatagcttata 42621452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 326
Target Start/End: Complemental strand, 42907373 - 42907330
Alignment:
Q  283 tgaaaacaacttatagcttatacgaaaacaattgaagtttattt 326  Q
    |||||||||||||||||||| |||||||||||| || |||||||    
T  42907373 tgaaaacaacttatagcttaaacgaaaacaatttaactttattt 42907330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 279 - 333
Target Start/End: Original strand, 2360388 - 2360442
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    |||||||||||||||| | | |||| |||||||||||||| ||||||| ||||||    
T  2360388 cttatgaaaacaacttgttgtttatgcgaaaacaattgaactttattttatcttt 2360442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 315
Target Start/End: Original strand, 6167309 - 6167371
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaatt 315  Q
    |||||||||||||||||| | || | ||||| |||||| ||||||||||| |||||| |||||    
T  6167309 ttatttccataagttctccaaaatagcttataaaaacagcttatagcttaaacgaaagcaatt 6167371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 277 - 315
Target Start/End: Original strand, 35755552 - 35755590
Alignment:
Q  277 aacttatgaaaacaacttatagcttatacgaaaacaatt 315  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  35755552 aacttatgaaaacaacttatagcttacatgaaaacaatt 35755590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 277 - 318
Target Start/End: Complemental strand, 1647034 - 1646993
Alignment:
Q  277 aacttatgaaaacaacttatagcttatacgaaaacaattgaa 318  Q
    |||||||||||||| |||||||||||||  ||||||||||||    
T  1647034 aacttatgaaaacagcttatagcttataaaaaaacaattgaa 1646993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 278 - 315
Target Start/End: Original strand, 23143029 - 23143066
Alignment:
Q  278 acttatgaaaacaacttatagcttatacgaaaacaatt 315  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  23143029 acttatgaaaacaactaatagcttataagaaaacaatt 23143066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 278 - 315
Target Start/End: Original strand, 23554819 - 23554856
Alignment:
Q  278 acttatgaaaacaacttatagcttatacgaaaacaatt 315  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  23554819 acttatgaaaacaactaatagcttataagaaaacaatt 23554856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000003; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 315
Target Start/End: Complemental strand, 12361236 - 12361174
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaatt 315  Q
    |||||||||| || ||||  ||| |||||||||||||| ||||||||||||| ||||||||||    
T  12361236 ttatttccattagctctcctgaataacttatgaaaacagcttatagcttatatgaaaacaatt 12361174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 315
Target Start/End: Original strand, 9834841 - 9834877
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaatt 315  Q
    |||||||||||||||||||||||||| ||||||||||    
T  9834841 cttatgaaaacaacttatagcttatatgaaaacaatt 9834877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 315
Target Start/End: Complemental strand, 24558871 - 24558835
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaatt 315  Q
    |||||||||||||||||||||||||||||||| ||||    
T  24558871 cttatgaaaacaacttatagcttatacgaaaataatt 24558835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 309
Target Start/End: Complemental strand, 31705129 - 31705073
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaa 309  Q
    ||||||||||||  ||||||| ||| |||||||||||| ||||||||||||| ||||    
T  31705129 ttatttccataaactctcaaggacagcttatgaaaacagcttatagcttatatgaaa 31705073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 254 - 333
Target Start/End: Original strand, 30627929 - 30628008
Alignment:
Q  254 tatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    |||||||||||| |||| |  | |||||||||||||||||||||||||| ||  ||||||||  | ||||||| ||||||    
T  30627929 tatttccataagctctctaagataacttatgaaaacaacttatagcttacacataaacaattttattttattttatcttt 30628008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 279 - 333
Target Start/End: Complemental strand, 16734047 - 16733993
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    ||||| ||||||||||||||| ||||| ||||||||| ||||||| || ||||||    
T  16734047 cttatcaaaacaacttatagcatatacaaaaacaatttaagtttagtttatcttt 16733993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 303
Target Start/End: Complemental strand, 29973125 - 29973075
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttat 303  Q
    ||||||||||||  ||||||| | | |||||||||||||||||||||||||    
T  29973125 ttatttccataaactctcaaggatagcttatgaaaacaacttatagcttat 29973075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 31862537 - 31862483
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacga 307  Q
    |||||| |||||| |||| || | |||||||||||||| ||||||||||||||||    
T  31862537 ttattttcataagctctctaggataacttatgaaaacatcttatagcttatacga 31862483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 279 - 333
Target Start/End: Complemental strand, 34770910 - 34770856
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 333  Q
    |||||||||||||||||||||||| | ||||||||||  | ||||||| ||||||    
T  34770910 cttatgaaaacaacttatagcttaaatgaaaacaatttgactttattttatcttt 34770856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 2595049 - 2595102
Alignment:
Q  279 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatctt 332  Q
    |||||||||||||||||| |||  ||||||||||||| || ||||||| |||||    
T  2595049 cttatgaaaacaacttatggctagtacgaaaacaatttaactttattttatctt 2595102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 39268530 - 39268595
Alignment:
Q  253 ttatttccataagttctcaagaacaacttatgaaaacaacttatagcttatacgaaaacaattgaa 318  Q
    ||||||||||||| |||| |||| | |||||||||||| ||| || |||||| ||||| |||||||    
T  39268530 ttatttccataagctctctagaaaagcttatgaaaacagcttttaacttatatgaaaataattgaa 39268595  T

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Target: scaffold0475 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 315
Target Start/End: Original strand, 11814 - 11843
Alignment:
Q  286 aaacaacttatagcttatacgaaaacaatt 315  Q
    ||||||||||||||||||||||||||||||    
T  11814 aaacaacttatagcttatacgaaaacaatt 11843  T

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