View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1120_low_10 (Length: 319)

Name: NF1120_low_10
Description: NF1120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1120_low_10
NF1120_low_10
[»] chr6 (1 HSPs)
chr6 (95-134)||(1823677-1823716)


Alignment Details
Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 134
Target Start/End: Original strand, 1823677 - 1823716
Alignment:
95 aaaatttcccttattgacatataaaattcgtttatgtcta 134  Q
    ||||||||||||||||||||||||||||||||||||||||    
1823677 aaaatttcccttattgacatataaaattcgtttatgtcta 1823716  T

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