View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1120_low_13 (Length: 265)
Name: NF1120_low_13
Description: NF1120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1120_low_13 |
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Alignment Details
Target: chr4 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 105 - 236
Target Start/End: Complemental strand, 42863125 - 42862994
Alignment:
| Q |
105 |
aactgtttgaagaaccttgtaattgttgtgatcttcaaagaataaccttgtacnnnnnnnnnggatagaagaagatccgaagtatgctccgttggtgatg |
204 |
Q |
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| T |
42863125 |
aactgtttgaagaaccttgtaattgttgtgatcttcaaagaataaccttgtactttttttttggatagaagaagatccggagtatgctccgttggtgatg |
42863026 |
T |
|
| Q |
205 |
attgatgaacctcaactcaagttaccttttac |
236 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
42863025 |
attgatgaacctcaactcaagttaccttttac |
42862994 |
T |
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