View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1120_low_18 (Length: 217)

Name: NF1120_low_18
Description: NF1120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1120_low_18
NF1120_low_18
[»] chr1 (59 HSPs)
chr1 (1-115)||(15324623-15324737)
chr1 (1-124)||(3607790-3607912)
chr1 (1-111)||(9978112-9978222)
chr1 (1-114)||(19954972-19955084)
chr1 (1-124)||(47940631-47940754)
chr1 (1-116)||(42561356-42561470)
chr1 (1-114)||(5189467-5189579)
chr1 (1-113)||(19797042-19797153)
chr1 (1-113)||(50627130-50627241)
chr1 (1-110)||(50162599-50162708)
chr1 (3-113)||(4299455-4299567)
chr1 (1-111)||(14387076-14387185)
chr1 (1-122)||(2854593-2854713)
chr1 (1-112)||(27928359-27928469)
chr1 (1-113)||(48954275-48954386)
chr1 (1-112)||(23698563-23698673)
chr1 (1-118)||(27926312-27926429)
chr1 (17-117)||(2125147-2125246)
chr1 (1-114)||(27240985-27241097)
chr1 (1-112)||(40647116-40647228)
chr1 (1-116)||(51276756-51276870)
chr1 (1-113)||(9895252-9895363)
chr1 (3-90)||(26208446-26208533)
chr1 (1-112)||(6079384-6079494)
chr1 (11-117)||(21930375-21930481)
chr1 (51-116)||(49285085-49285150)
chr1 (1-114)||(1387778-1387888)
chr1 (1-96)||(48645075-48645168)
chr1 (59-116)||(47940566-47940623)
chr1 (1-115)||(51789658-51789769)
chr1 (1-42)||(957658-957699)
chr1 (54-111)||(19796982-19797039)
chr1 (1-38)||(36880584-36880621)
chr1 (3-43)||(28244026-28244066)
chr1 (1-41)||(29598393-29598433)
chr1 (1-40)||(36007881-36007920)
chr1 (54-113)||(36880624-36880683)
chr1 (59-113)||(27240923-27240977)
chr1 (59-112)||(2125070-2125123)
chr1 (59-111)||(3607730-3607782)
chr1 (1-41)||(27670213-27670253)
chr1 (55-115)||(50627245-50627305)
chr1 (3-43)||(50856384-50856424)
chr1 (54-117)||(1387891-1387954)
chr1 (1-40)||(18651311-18651350)
chr1 (59-114)||(19954909-19954964)
chr1 (59-118)||(27928292-27928351)
chr1 (51-114)||(36880287-36880350)
chr1 (1-40)||(39015254-39015293)
chr1 (59-122)||(51789587-51789650)
chr1 (59-113)||(29598455-29598509)
chr1 (59-113)||(49284293-49284347)
chr1 (1-43)||(49284355-49284397)
chr1 (55-108)||(28823219-28823272)
chr1 (1-33)||(2302481-2302513)
chr1 (59-115)||(2854529-2854585)
chr1 (59-115)||(23698499-23698555)
chr1 (60-112)||(25297966-25298018)
chr1 (73-113)||(40647250-40647290)
[»] scaffold0122 (2 HSPs)
scaffold0122 (1-116)||(45830-45944)
scaffold0122 (59-117)||(45952-46010)
[»] chr2 (38 HSPs)
chr2 (3-113)||(20892883-20892993)
chr2 (1-113)||(23835875-23835987)
chr2 (1-114)||(45408623-45408735)
chr2 (1-111)||(7737065-7737175)
chr2 (1-113)||(1924041-1924153)
chr2 (1-114)||(27920571-27920682)
chr2 (1-127)||(9933630-9933755)
chr2 (1-112)||(24101893-24102003)
chr2 (1-121)||(3116867-3116986)
chr2 (1-115)||(42713838-42713952)
chr2 (1-114)||(16705731-16705843)
chr2 (3-112)||(34455885-34455993)
chr2 (1-113)||(9281408-9281519)
chr2 (1-113)||(34490455-34490566)
chr2 (1-112)||(12850603-12850713)
chr2 (1-112)||(22269722-22269832)
chr2 (1-107)||(2818671-2818776)
chr2 (1-113)||(6605737-6605845)
chr2 (60-124)||(8111692-8111756)
chr2 (59-118)||(1923974-1924033)
chr2 (54-113)||(34490569-34490628)
chr2 (54-116)||(24101828-24101890)
chr2 (1-112)||(29229424-29229534)
chr2 (1-112)||(29342724-29342834)
chr2 (113-162)||(4354849-4354895)
chr2 (1-43)||(43476014-43476056)
chr2 (73-116)||(6605866-6605909)
chr2 (59-114)||(7737183-7737238)
chr2 (59-114)||(27920690-27920745)
chr2 (1-42)||(9850819-9850860)
chr2 (53-114)||(20892997-20893057)
chr2 (59-116)||(43858552-43858609)
chr2 (59-112)||(45408743-45408796)
chr2 (59-115)||(3116994-3117050)
chr2 (3-43)||(7116438-7116478)
chr2 (15-43)||(17434755-17434783)
chr2 (57-113)||(22269838-22269894)
chr2 (59-123)||(42713766-42713830)
[»] chr6 (27 HSPs)
chr6 (1-123)||(15546621-15546742)
chr6 (1-113)||(885384-885495)
chr6 (1-122)||(8091052-8091172)
chr6 (1-115)||(13439692-13439806)
chr6 (1-116)||(21380002-21380116)
chr6 (1-112)||(11687204-11687314)
chr6 (1-112)||(20501706-20501816)
chr6 (1-114)||(4890541-4890654)
chr6 (1-116)||(18998177-18998292)
chr6 (1-112)||(3368985-3369095)
chr6 (1-111)||(7808610-7808719)
chr6 (1-98)||(14393575-14393674)
chr6 (3-43)||(13172636-13172676)
chr6 (1-112)||(4238852-4238964)
chr6 (59-118)||(6433684-6433743)
chr6 (1-113)||(29609000-29609111)
chr6 (3-108)||(31764388-31764492)
chr6 (54-111)||(7808722-7808779)
chr6 (59-114)||(8091180-8091235)
chr6 (55-118)||(11687137-11687200)
chr6 (59-113)||(4890479-4890533)
chr6 (59-113)||(14393682-14393736)
chr6 (54-108)||(20501819-20501872)
chr6 (59-113)||(21379940-21379994)
chr6 (59-115)||(15546750-15546806)
chr6 (1-41)||(17367118-17367158)
chr6 (82-118)||(5416655-5416691)
[»] chr5 (39 HSPs)
chr5 (1-110)||(24397306-24397415)
chr5 (1-118)||(15855837-15855953)
chr5 (1-115)||(35420673-35420786)
chr5 (1-120)||(16472947-16473065)
chr5 (1-122)||(4265971-4266092)
chr5 (1-113)||(1138558-1138669)
chr5 (1-125)||(20476418-20476541)
chr5 (1-113)||(21259791-21259902)
chr5 (1-116)||(43539104-43539217)
chr5 (1-111)||(12744829-12744936)
chr5 (1-113)||(12807911-12808021)
chr5 (1-113)||(19976260-19976372)
chr5 (1-85)||(21261970-21262053)
chr5 (3-117)||(13754354-13754467)
chr5 (1-114)||(33629406-33629520)
chr5 (9-113)||(35276361-35276465)
chr5 (55-121)||(35420603-35420669)
chr5 (55-108)||(8364744-8364797)
chr5 (3-43)||(1456085-1456125)
chr5 (59-114)||(20476549-20476604)
chr5 (73-115)||(17583371-17583413)
chr5 (5-84)||(37655217-37655294)
chr5 (59-112)||(2268723-2268776)
chr5 (55-112)||(15855957-15856014)
chr5 (55-112)||(16473069-16473126)
chr5 (1-41)||(780855-780895)
chr5 (11-112)||(1164866-1164967)
chr5 (59-115)||(33629342-33629398)
chr5 (2-41)||(735346-735385)
chr5 (11-42)||(32623286-32623317)
chr5 (5-40)||(37552373-37552408)
chr5 (64-113)||(780915-780964)
chr5 (59-124)||(1138677-1138742)
chr5 (59-108)||(4913267-4913316)
chr5 (1-33)||(1384389-1384421)
chr5 (8-40)||(12257582-12257614)
chr5 (64-116)||(29141801-29141853)
chr5 (1-37)||(34513479-34513515)
chr5 (52-108)||(42522931-42522987)
[»] chr8 (29 HSPs)
chr8 (1-121)||(15882191-15882311)
chr8 (1-112)||(23940865-23940976)
chr8 (3-114)||(29781022-29781132)
chr8 (1-113)||(8210322-8210433)
chr8 (1-113)||(17426689-17426802)
chr8 (3-116)||(33100708-33100820)
chr8 (1-111)||(37114239-37114348)
chr8 (1-115)||(38520015-38520128)
chr8 (1-116)||(12234462-12234577)
chr8 (54-112)||(33100645-33100703)
chr8 (1-43)||(40891081-40891123)
chr8 (3-112)||(24211341-24211449)
chr8 (1-113)||(38629473-38629584)
chr8 (1-41)||(4262037-4262077)
chr8 (59-115)||(15882319-15882375)
chr8 (3-42)||(11828659-11828698)
chr8 (1-41)||(25264288-25264328)
chr8 (59-114)||(12234585-12234640)
chr8 (59-114)||(17426626-17426681)
chr8 (59-118)||(24211272-24211331)
chr8 (59-110)||(40891131-40891182)
chr8 (51-113)||(11828713-11828775)
chr8 (59-113)||(24741822-24741876)
chr8 (59-121)||(35467288-35467350)
chr8 (59-113)||(38629592-38629646)
chr8 (1-30)||(38515585-38515614)
chr8 (51-111)||(5356234-5356294)
chr8 (1-41)||(24741884-24741924)
chr8 (8-40)||(29869941-29869973)
[»] chr4 (42 HSPs)
chr4 (1-114)||(1298910-1299022)
chr4 (3-112)||(530732-530840)
chr4 (1-113)||(13204376-13204487)
chr4 (3-113)||(27434609-27434718)
chr4 (1-111)||(42274553-42274663)
chr4 (1-111)||(18417658-18417767)
chr4 (1-115)||(20435201-20435314)
chr4 (3-115)||(52824236-52824347)
chr4 (1-118)||(28809908-28810024)
chr4 (1-121)||(4552776-4552895)
chr4 (1-112)||(24969602-24969715)
chr4 (1-112)||(55107524-55107634)
chr4 (1-118)||(35360671-35360786)
chr4 (1-111)||(4688308-4688418)
chr4 (1-114)||(24915855-24915971)
chr4 (1-114)||(4894967-4895082)
chr4 (1-109)||(56552064-56552171)
chr4 (1-108)||(2272371-2272476)
chr4 (1-112)||(23928628-23928738)
chr4 (59-114)||(530667-530722)
chr4 (59-118)||(55107642-55107701)
chr4 (59-117)||(4688242-4688300)
chr4 (59-113)||(28809845-28809899)
chr4 (1-43)||(32318781-32318823)
chr4 (1-42)||(21048766-21048807)
chr4 (59-118)||(3422423-3422482)
chr4 (59-114)||(24915792-24915847)
chr4 (59-118)||(42274486-42274545)
chr4 (7-42)||(52587382-52587417)
chr4 (59-113)||(18417775-18417829)
chr4 (7-41)||(36030997-36031031)
chr4 (1-43)||(55049461-55049503)
chr4 (3-42)||(24294536-24294575)
chr4 (59-122)||(32318710-32318773)
chr4 (59-113)||(1299030-1299084)
chr4 (78-116)||(11330102-11330140)
chr4 (1-34)||(3422490-3422523)
chr4 (59-112)||(27434728-27434781)
chr4 (59-116)||(43486196-43486253)
chr4 (59-112)||(55049400-55049453)
chr4 (59-115)||(4552903-4552959)
chr4 (59-115)||(24969538-24969594)
[»] chr3 (71 HSPs)
chr3 (1-117)||(10441319-10441434)
chr3 (1-114)||(4072334-4072447)
chr3 (1-115)||(12838074-12838187)
chr3 (1-114)||(3970552-3970664)
chr3 (1-113)||(21969218-21969329)
chr3 (1-113)||(21991654-21991765)
chr3 (1-113)||(25488402-25488513)
chr3 (1-113)||(25561010-25561121)
chr3 (1-112)||(36822821-36822931)
chr3 (1-114)||(36657494-36657606)
chr3 (3-115)||(157031-157143)
chr3 (1-113)||(25446250-25446360)
chr3 (1-114)||(45487797-45487909)
chr3 (1-108)||(8831744-8831851)
chr3 (1-116)||(10254564-10254679)
chr3 (1-111)||(5529892-5530002)
chr3 (1-112)||(13078224-13078334)
chr3 (3-116)||(10117511-10117624)
chr3 (1-115)||(12789603-12789716)
chr3 (1-110)||(43639142-43639251)
chr3 (1-113)||(26906453-26906564)
chr3 (1-113)||(32237455-32237566)
chr3 (1-112)||(55340354-55340465)
chr3 (1-116)||(10017110-10017224)
chr3 (1-112)||(36278817-36278927)
chr3 (1-118)||(404038-404155)
chr3 (1-113)||(39850405-39850517)
chr3 (3-123)||(46664165-46664284)
chr3 (5-113)||(36329245-36329352)
chr3 (1-109)||(45712964-45713071)
chr3 (1-83)||(22101193-22101275)
chr3 (1-112)||(43150480-43150590)
chr3 (1-116)||(13724048-13724163)
chr3 (1-83)||(22176137-22176219)
chr3 (1-116)||(1476612-1476726)
chr3 (11-113)||(38125250-38125351)
chr3 (1-105)||(44611442-44611545)
chr3 (59-113)||(4072272-4072326)
chr3 (54-116)||(35368545-35368607)
chr3 (1-43)||(35368801-35368843)
chr3 (1-113)||(44920707-44920817)
chr3 (59-116)||(21969153-21969210)
chr3 (59-116)||(21991589-21991646)
chr3 (59-116)||(26976838-26976895)
chr3 (3-43)||(46679329-46679369)
chr3 (3-43)||(50099502-50099542)
chr3 (54-113)||(36822759-36822818)
chr3 (59-114)||(50099552-50099607)
chr3 (59-117)||(8831859-8831917)
chr3 (55-117)||(10441253-10441315)
chr3 (73-111)||(13723989-13724027)
chr3 (59-113)||(36329187-36329241)
chr3 (55-113)||(36657432-36657490)
chr3 (1-108)||(42105444-42105550)
chr3 (59-113)||(45487917-45487971)
chr3 (59-112)||(22176227-22176280)
chr3 (1-34)||(26977767-26977800)
chr3 (3-40)||(37536941-37536978)
chr3 (54-115)||(39850341-39850402)
chr3 (59-115)||(10117629-10117685)
chr3 (59-119)||(25446368-25446427)
chr3 (59-114)||(44611380-44611434)
chr3 (59-113)||(3970490-3970544)
chr3 (59-117)||(25561129-25561187)
chr3 (59-112)||(13078163-13078216)
chr3 (1-34)||(26976903-26976936)
chr3 (51-112)||(32362861-32362922)
chr3 (73-114)||(43639079-43639120)
chr3 (59-112)||(45712903-45712956)
chr3 (59-116)||(46222024-46222081)
chr3 (59-111)||(10254687-10254739)
[»] chr7 (43 HSPs)
chr7 (1-115)||(20184299-20184413)
chr7 (1-115)||(24836017-24836130)
chr7 (1-115)||(30594690-30594803)
chr7 (1-114)||(30259127-30259239)
chr7 (1-116)||(31231675-31231791)
chr7 (1-113)||(38883220-38883331)
chr7 (1-112)||(3953103-3953213)
chr7 (1-112)||(34052279-34052389)
chr7 (1-115)||(48103365-48103478)
chr7 (5-113)||(10936535-10936642)
chr7 (1-112)||(39617902-39618012)
chr7 (3-113)||(25742494-25742603)
chr7 (1-112)||(12142192-12142303)
chr7 (5-115)||(38528475-38528586)
chr7 (1-110)||(35339339-35339447)
chr7 (1-113)||(45997569-45997680)
chr7 (3-114)||(47237488-47237601)
chr7 (1-117)||(9285775-9285890)
chr7 (1-117)||(9289842-9289957)
chr7 (1-43)||(24123816-24123858)
chr7 (15-111)||(35665691-35665786)
chr7 (1-115)||(37093765-37093878)
chr7 (1-112)||(29277838-29277947)
chr7 (54-113)||(35665632-35665691)
chr7 (59-112)||(31231614-31231667)
chr7 (1-42)||(40358184-40358225)
chr7 (59-115)||(35339275-35339331)
chr7 (55-118)||(38883335-38883398)
chr7 (73-115)||(17101651-17101693)
chr7 (60-114)||(33721825-33721879)
chr7 (3-41)||(39143775-39143813)
chr7 (59-112)||(24836138-24836191)
chr7 (59-112)||(45997508-45997561)
chr7 (1-40)||(1402990-1403029)
chr7 (1-40)||(10398390-10398429)
chr7 (73-112)||(17101706-17101745)
chr7 (1-40)||(25572883-25572922)
chr7 (59-114)||(34052397-34052452)
chr7 (1-36)||(44148722-44148757)
chr7 (59-112)||(20184238-20184291)
chr7 (1-42)||(33749713-33749754)
chr7 (51-108)||(38528394-38528451)
chr7 (59-112)||(48103483-48103536)
[»] scaffold0163 (2 HSPs)
scaffold0163 (1-112)||(2000-2111)
scaffold0163 (59-117)||(1934-1992)
[»] scaffold0107 (2 HSPs)
scaffold0107 (1-121)||(51054-51173)
scaffold0107 (59-115)||(51181-51237)
[»] scaffold0188 (1 HSPs)
scaffold0188 (1-113)||(7085-7196)
[»] scaffold0118 (2 HSPs)
scaffold0118 (13-114)||(14440-14540)
scaffold0118 (59-111)||(14560-14612)
[»] scaffold0086 (2 HSPs)
scaffold0086 (1-114)||(48124-48236)
scaffold0086 (59-111)||(48244-48296)
[»] scaffold0653 (1 HSPs)
scaffold0653 (1-117)||(3454-3569)
[»] scaffold0137 (1 HSPs)
scaffold0137 (1-116)||(10112-10225)
[»] scaffold0069 (1 HSPs)
scaffold0069 (53-122)||(26395-26464)
[»] scaffold0595 (2 HSPs)
scaffold0595 (51-113)||(5700-5762)
scaffold0595 (59-114)||(5823-5880)
[»] scaffold0006 (1 HSPs)
scaffold0006 (15-115)||(72346-72444)


Alignment Details
Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 15324737 - 15324623
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| ||||||||||||||||||||| |    
T  15324737 tgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaagaaattgtacc 15324638  T
Q  101 taagttttctccttt 115  Q
    |||||||||||||||    
T  15324637 taagttttctccttt 15324623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 3607790 - 3607912
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| ||||||||||||||||||||| |    
T  3607790 tgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaagaaattgtacc 3607888  T
Q  101 taagttttctccttttttaaatat 124  Q
    |||||||||||||| | |||||||    
T  3607889 taagttttctccttatataaatat 3607912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 9978112 - 9978222
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| ||||||||||||| ||||||| |    
T  9978112 tgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacc 9978211  T
Q  101 taagttttctc 111  Q
    |||||||||||    
T  9978212 taagttttctc 9978222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 19954972 - 19955084
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||||||||| ||||||| ||||||| |    
T  19954972 tgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacaaaaagtacctaaggaattgtacc 19955070  T
Q  101 taagttttctcctt 114  Q
    ||||||||||||||    
T  19955071 taagttttctcctt 19955084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 47940631 - 47940754
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| |||| |||||||| ||||||| |    
T  47940631 tgatttcctcgaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtacc 47940730  T
Q  101 taagttttctccttttttaaatat 124  Q
    ||||||||||||||| | ||||||    
T  47940731 taagttttctcctttgtaaaatat 47940754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 42561356 - 42561470
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||| ||| |||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||||||||||||||||| ||||||| |    
T  42561356 tgatttcttcatatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacc 42561454  T
Q  101 taagttttctcctttt 116  Q
    ||||||||||||||||    
T  42561455 taagttttctcctttt 42561470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 5189579 - 5189467
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| ||||||||||||| ||||||| |    
T  5189579 tgatttccttaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacc 5189481  T
Q  101 taagttttctcctt 114  Q
    ||||||||||||||    
T  5189480 taagttttctcctt 5189467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 19797042 - 19797153
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||       ||||||||||||||||||| | |||| ||||||||||||| ||||||| |    
T  19797042 tgatttcctcaaatccataattttttcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacc 19797140  T
Q  101 taagttttctcct 113  Q
    |||||||||||||    
T  19797141 taagttttctcct 19797153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 50627241 - 50627130
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| ||||||| ||||| ||||||| |    
T  50627241 tgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacc 50627143  T
Q  101 taagttttctcct 113  Q
    |||||||||||||    
T  50627142 taagttttctcct 50627130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 50162599 - 50162708
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||| |||||||| |||||||||||||||||||||||||||       |||||| |||||||||||| | |||||||||||||||||| ||||||| |    
T  50162599 tgattttctcaaatctataattttctcaaagtttgttatatccaaaaaaatatgtaattttagttaagaaccatacaaaaagcacctaaggaattgtacc 50162698  T
Q  101 taagttttct 110  Q
    ||||||||||    
T  50162699 taagttttct 50162708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 4299455 - 4299567
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatatcc--nnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||| | |||| |||| |||||||| ||||||| |    
T  4299455 atttcctcaaatccataattttctcaaagtttgttatatccaaaaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtacc 4299554  T
Q  101 taagttttctcct 113  Q
    |||||||||||||    
T  4299555 taagttttctcct 4299567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 14387076 - 14387185
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||       ||||||||||||||||||| | |||| |||| |||||||| ||||||| |    
T  14387076 tgatttcctcaaatccataattttctcaaagtttattatatcc-aaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtacc 14387174  T
Q  101 taagttttctc 111  Q
    |||||||||||    
T  14387175 taagttttctc 14387185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 2854593 - 2854713
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||       ||| ||||||||||||||| | |||| ||||| ||||||| ||||||| |    
T  2854593 tgatttcctcaaattcataattttctcaaagtttgttatatcc-aaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaattgtacc 2854691  T
Q  101 taagttttctccttttttaaat 122  Q
    ||||||||||||| | ||||||    
T  2854692 taagttttctcctatattaaat 2854713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 27928359 - 27928469
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| |||| |||||||| |||||||      
T  27928359 tgatttcctcaa-tccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtaca 27928457  T
Q  101 taagttttctcc 112  Q
    ||||||||||||    
T  27928458 taagttttctcc 27928469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 48954275 - 48954386
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||       ||| ||||||||||||||| | |||| ||||| ||||||| ||||||| |    
T  48954275 tgatttcctcaaattcataattttctcaaagtttgttatatcc-aaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaattgtacc 48954373  T
Q  101 taagttttctcct 113  Q
    |||||||||||||    
T  48954374 taagttttctcct 48954386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 23698563 - 23698673
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||       ||| ||||||||||||||| | |||| ||||| ||||||| ||||||| |    
T  23698563 tgatttcctcaaattcataattttctcaaagtttgttatatcc-aaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaattgtacc 23698661  T
Q  101 taagttttctcc 112  Q
    ||||||||||||    
T  23698662 taagttttctcc 23698673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 27926312 - 27926429
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnn-tatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||        ||||||||||||||||||| | |||| ||||||||||||| |||||||     
T  27926312 tgatttcctcaa-tccataattttctcaaagtttgttatatccaaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtac 27926410  T
Q  100 ctaagttttctcctttttt 118  Q
     |||||||||||| |||||    
T  27926411 ataagttttctccattttt 27926429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 2125147 - 2125246
Alignment:
Q  17 ataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctttt 116  Q
    ||||||||||||||||||||||||||        ||||||||||||||||||| | |||| ||||||||||||||||||||| |||| ||||||||||||    
T  2125147 ataattttctcaaagtttgttatatc-aaaaaaatatgtatttttagttaagaactatacgaaaagcacctaagaaattgtacctaaattttctcctttt 2125245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 27240985 - 27241097
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||       ||| ||||||||||||||| | ||||  |||||||||||  ||||||| |    
T  27240985 tgattttctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatatatttttagttaagaaccatacgcaaagcacctaacgaattgtacc 27241083  T
Q  101 taagttttctcctt 114  Q
    ||||||||||||||    
T  27241084 taagttttctcctt 27241097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 40647228 - 40647116
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatat-ccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||| | | || ||||||| ||||| ||||||||    
T  40647228 tgatttcctcaaatccataattttctcaaagtttgttatataaaaaaaaaatatgtatttttagttaagaaccacacgaaaagcagctaaggaattgtaa 40647129  T
Q  100 ctaagttttctcc 112  Q
    |||||||||||||    
T  40647128 ctaagttttctcc 40647116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 51276756 - 51276870
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||| ||||||          |||||||||||| ||||| | |||| ||||||||||||||||||||| |    
T  51276756 tgatttcctcaaatccataattttctcaaagtttattatataaaaaaaaa-atgtatttttagctaagaaccatacgaaaagcacctaagaaattgtacc 51276854  T
Q  101 taagttttctcctttt 116  Q
    ||||||||||| ||||    
T  51276855 taagttttctcttttt 51276870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 9895363 - 9895252
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||| |||||||||||||||||||||||||| |       ||||||||||||||||||| | |||| ||||| |||||| ||||| || |    
T  9895363 tgatttcctcaaatacataattttctcaaagtttgttatat-caaaaaaatatgtatttttagttaagaaccatacgaaaagtacctaaaaaattatacc 9895265  T
Q  101 taagttttctcct 113  Q
    ||| |||||||||    
T  9895264 taaattttctcct 9895252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 26208533 - 26208446
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaag 90  Q
    ||||| |||||||||||||||||||||||||||||||||||       ||||||||||||||| ||| | |||| |||||||||||||    
T  26208533 atttcttcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttgagaaccatacgaaaagcacctaag 26208446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 6079494 - 6079384
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||| |||| |  ||| |||| || ||||| ||||||| |    
T  6079494 tgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagtgaagaaccgtacgaaaaacatctaaggaattgtacc 6079396  T
Q  101 taagttttctcc 112  Q
    | ||||||||||    
T  6079395 tgagttttctcc 6079384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 21930481 - 21930375
Alignment:
Q  11 aaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttct 110  Q
    |||||||||||||||| ||||||||||||||||       ||||||||||||||||||| | |||| |||| || ||||| |||||||||| || |||||    
T  21930481 aaatccataattttcttaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaaacaactaaggaattgtaactgaggtttct 21930382  T
Q  111 ccttttt 117  Q
    || ||||    
T  21930381 ccatttt 21930375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 49285085 - 49285150
Alignment:
Q  51 tatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctttt 116  Q
    ||||||||||||||||||| | |||| ||||||||||||| ||||||| |||||||||||||||||    
T  49285085 tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctttt 49285150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 1387888 - 1387778
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||| ||||||||||||||||||| ||||||||       ||||||||||||||||||| | |||| ||||||| ||||| |||||| |     
T  1387888 tgatttcctcaaattcataattttctcaaagtttattatatcc-aaaaaatatgtatttttagttaagaaccatacgaaaagca-ctaaggaattgt-ag 1387792  T
Q  101 taagttttctcctt 114  Q
    ||||||||||||||    
T  1387791 taagttttctcctt 1387778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 48645075 - 48645168
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattg 96  Q
    ||||||||||||||||||||||||||||||||||||||||| |       ||||||||||||||||||| |  ||| |||||||||||| ||||||    
T  48645075 tgatttcctcaaatccataattttctcaaagtttgttatat-ctaaaaaatatgtatttttagttaagaac-ctacgaaaagcacctaaaaaattg 48645168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 47940623 - 47940566
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctttt 116  Q
    ||||||||||| | |||| ||||||||||||||||||||| |||||||||||||||||    
T  47940623 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctcctttt 47940566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 51789658 - 51789769
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||| ||||||||||||||||||| |||||||||         |||| ||||||||||||| | |||| |||||||  |||| ||||||| |    
T  51789658 tgatttcctcaattccataattttctcaaagtatgttatatc---taaaaaatgtgtttttagttaagaaccatacgaaaagcatttaaggaattgtacc 51789754  T
Q  101 taagttttctccttt 115  Q
    |||||||||||||||    
T  51789755 taagttttctccttt 51789769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 957699 - 957658
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatc 42  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  957699 tgattttctcaaatccataattttctcaaagtttgttatatc 957658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 19797039 - 19796982
Alignment:
Q  54 gtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctc 111  Q
    |||||||||||||| | | |||| ||||||||||||||||||||| ||||||||||||    
T  19797039 gtatttttagttaaaaaccatacgaaaagcacctaagaaattgtacctaagttttctc 19796982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36880621 - 36880584
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgtta 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36880621 tgatttcctcaaatccataattttctcaaagtttgtta 36880584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 28244066 - 28244026
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatatcc 43  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  28244066 atttccttaaatccataattttctcaaagtttgttatatcc 28244026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 29598433 - 29598393
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatat 41  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  29598433 tgatttccttaaatccataattttctcaaagtttgttatat 29598393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 36007881 - 36007920
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttata 40  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  36007881 tgatttcctcaaatacataattttctcaaagtttgttata 36007920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 36880624 - 36880683
Alignment:
Q  54 gtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcct 113  Q
    |||||||||||||||| | |||| ||||||| ||||| ||||||| ||||||||||||||    
T  36880624 gtatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcct 36880683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 27240977 - 27240923
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcct 113  Q
    ||||||||||| | |||| ||||||||||||| ||||||| ||||||||||||||    
T  27240977 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcct 27240923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 2125123 - 2125070
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcc 112  Q
    ||||||||||| | |||| |||||||| ||||||||||||||||| ||||||||    
T  2125123 tttagttaagaaccatacgaaaagcacataagaaattgtaactaaattttctcc 2125070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 111
Target Start/End: Complemental strand, 3607782 - 3607730
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctc 111  Q
    ||||||||||| | ||||||||||||||||||||||| || |||| |||||||    
T  3607782 tttagttaagaaccatacaaaaagcacctaagaaattctacctaaattttctc 3607730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27670253 - 27670213
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatat 41  Q
    ||||||||| |||||||||||||||||||||||| ||||||    
T  27670253 tgatttccttaaatccataattttctcaaagttttttatat 27670213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 50627245 - 50627305
Alignment:
Q  55 tatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttt 115  Q
    ||||||||||||||| | |||| |||||||  |||| ||||||| ||||||||||||||||    
T  50627245 tatttttagttaagaaccatacgaaaagcatataaggaattgtacctaagttttctccttt 50627305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 50856384 - 50856424
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatatcc 43  Q
    |||||||||| ||||||||||||||||| ||||||||||||    
T  50856384 atttcctcaagtccataattttctcaaaatttgttatatcc 50856424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 1387891 - 1387954
Alignment:
Q  54 gtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttttt 117  Q
    |||| ||||||||||| | |||| ||||||||||||| ||||||| |||| ||||||| |||||    
T  1387891 gtatctttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctcattttt 1387954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 18651311 - 18651350
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttata 40  Q
    |||||||| ||||||||||||||||||||| |||||||||    
T  18651311 tgatttccccaaatccataattttctcaaaatttgttata 18651350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 19954964 - 19954909
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctt 114  Q
    ||||||||||| | |||| |||||||| |||| ||||||| |||||||||||||||    
T  19954964 tttagttaagaactatacgaaaagcacataaggaattgtacctaagttttctcctt 19954909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 27928351 - 27928292
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctttttt 118  Q
    ||||||||||| | ||||||||||||| |||| ||||||| ||||||||| || ||||||    
T  27928351 tttagttaagaaccatacaaaaagcacataaggaattgtatctaagttttttcatttttt 27928292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 36880350 - 36880287
Alignment:
Q  51 tatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctt 114  Q
    |||||||||||||||| || | |||| |||| ||| ||| |||||||| |||||||||||||||    
T  36880350 tatgtatttttagttaggaaccatacgaaaaacacttaaaaaattgtacctaagttttctcctt 36880287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 39015254 - 39015293
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttata 40  Q
    ||||||| ||||||||||||||||||||||||| ||||||    
T  39015254 tgatttcttcaaatccataattttctcaaagttcgttata 39015293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 122
Target Start/End: Complemental strand, 51789650 - 51789587
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttttttaaat 122  Q
    ||||||||| | | |||| |||| |||||||| ||||||| |||||||||||||||||| ||||    
T  51789650 tttagttaaaaaccatacgaaaatcacctaaggaattgtacctaagttttctcctttttaaaat 51789587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 29598455 - 29598509
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcct 113  Q
    ||||||||||| | |||||||||| ||||||  ||||||| ||||||||||||||    
T  29598455 tttagttaagaaccatacaaaaagtacctaacgaattgtacctaagttttctcct 29598509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 49284347 - 49284293
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcct 113  Q
    ||||||||||| | ||||||||| || ||||||||||||| ||||||||| ||||    
T  49284347 tttagttaagaaccatacaaaaaacaactaagaaattgtacctaagttttttcct 49284293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 49284355 - 49284397
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatcc 43  Q
    |||||| || |||||||||||||| ||||||||||||||||||    
T  49284355 tgattttcttaaatccataattttttcaaagtttgttatatcc 49284397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 108
Target Start/End: Original strand, 28823219 - 28823272
Alignment:
Q  55 tatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagtttt 108  Q
    ||||||||||||||| | ||||||||| | |||||||||||||| |||| ||||    
T  28823219 tatttttagttaagaaccatacaaaaaactcctaagaaattgtatctaaatttt 28823272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 2302513 - 2302481
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtt 33  Q
    |||||||||||||| ||||||||||||||||||    
T  2302513 tgatttcctcaaattcataattttctcaaagtt 2302481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 2854585 - 2854529
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttt 115  Q
    ||||||||||| | |||| ||||| | ||||| ||||||| ||||||||||||||||    
T  2854585 tttagttaagaaccatacgaaaagtatctaaggaattgtacctaagttttctccttt 2854529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 23698555 - 23698499
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttt 115  Q
    ||||||||||| | |||| ||||| | ||||| ||||||| ||||||||||||||||    
T  23698555 tttagttaagaaccatacgaaaagtatctaaggaattgtacctaagttttctccttt 23698499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 25297966 - 25298018
Alignment:
Q  60 ttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcc 112  Q
    |||||||||| | |||| |||| |||||||| ||||||| |||||||||||||    
T  25297966 ttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctcc 25298018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 40647250 - 40647290
Alignment:
Q  73 atacaaaaagcacctaagaaattgtaactaagttttctcct 113  Q
    |||| ||||||||||||| ||||||| ||||||||||||||    
T  40647250 atacgaaaagcacctaaggaattgtacctaagttttctcct 40647290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 45944 - 45830
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||||||||||||||||| ||||||| |    
T  45944 tgattttctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacc 45846  T
Q  101 taagttttctcctttt 116  Q
    ||||||||||||||||    
T  45845 taagttttctcctttt 45830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 45952 - 46010
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttttt 117  Q
    ||||||||||| | |||  ||||||||||||| ||||||| ||||||||||||| ||||    
T  45952 tttagttaagaaccataagaaaagcacctaaggaattgtacctaagttttctccatttt 46010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 20892993 - 20892883
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaacta 102  Q
    ||||| |||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| ||||||||||||||||||||| |||    
T  20892993 atttcatcaaatccataattttctcaaagtttgttatatccataaaaatatgtatttttagttaagaaccatacgaaaagcacctaagaaattgtaccta 20892894  T
Q  103 agttttctcct 113  Q
    |||||||||||    
T  20892893 agttttctcct 20892883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 23835987 - 23835875
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| ||||||||||||| |||||||      
T  23835987 tgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtaca 23835888  T
Q  101 taagttttctcct 113  Q
    |||||||||||||    
T  23835887 taagttttctcct 23835875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 45408735 - 45408623
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | ||||||||| |||||||| ||||||| |    
T  45408735 tgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacaaaaaacacctaaggaattgtacc 45408637  T
Q  101 taagttttctcctt 114  Q
    ||||||||||||||    
T  45408636 taagttttctcctt 45408623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 7737175 - 7737065
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||   |||| ||||||||||||||||||||| |    
T  7737175 tgatttcctcaaagccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaatcataccaaaagcacctaagaaattgtacc 7737076  T
Q  101 taagttttctc 111  Q
    |||||||||||    
T  7737075 taagttttctc 7737065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 1924041 - 1924153
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| |||| |||||||| ||||||| |    
T  1924041 tgatttcctcgaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtacc 1924140  T
Q  101 taagttttctcct 113  Q
    |||||||||||||    
T  1924141 taagttttctcct 1924153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 27920682 - 27920571
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||       |||||| |||||||||||||| |||| |||||||||||||||||||| ||    
T  27920682 tgatttcctcaaatccataattttttcaaagtttgttatatccaaaaaa-tatgtagttttagttaagacccatacgaaaagcacctaagaaattgt-ac 27920585  T
Q  101 taagttttctcctt 114  Q
    ||||||||||||||    
T  27920584 taagttttctcctt 27920571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 9933630 - 9933755
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||| ||||||||||||||||||||||||||| |||||||        ||||||||||||||||||| | |||| ||||||||||||||||||||| |    
T  9933630 tgattttctcaaatccataattttctcaaagtttattatatc-taaaaaatatgtatttttagttaagaaccatacgaaaagcacctaagaaattgtacc 9933728  T
Q  101 taagttttctccttttttaaatatcaa 127  Q
    ||| ||||||||||||| |||| ||||    
T  9933729 taaattttctcctttttaaaatttcaa 9933755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 24101893 - 24102003
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| ||||||||||||| |||||||      
T  24101893 tgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtact 24101991  T
Q  101 taagttttctcc 112  Q
    ||||||||||||    
T  24101992 taagttttctcc 24102003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 3116986 - 3116867
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| ||||||||| ||  ||||||| |    
T  3116986 tgattttctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcaccaaaagaattgtacc 3116888  T
Q  101 taagttttctccttttttaaa 121  Q
    ||||||||||||| |||||||    
T  3116887 taagttttctcctattttaaa 3116867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 42713838 - 42713952
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||| ||||||||||||||||||||||||||| ||||||||       |||||||||||||||||||   || | |||||||| |||||||||||| |    
T  42713838 tgattttctcaaatccataattttctcaaagtttattatatccaaaaaaatatgtatttttagttaagaatcatgcgaaaagcacttaagaaattgtacc 42713937  T
Q  101 taagttttctccttt 115  Q
    |||||||||||||||    
T  42713938 taagttttctccttt 42713952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 16705843 - 16705731
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||| |||||| |||||||||| ||||||||||||||||||       ||||||||||||||||||| | |||| ||||||||||||| ||||||| |    
T  16705843 tgattttctcaaagccataattttatcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacc 16705745  T
Q  101 taagttttctcctt 114  Q
    ||||||||||||||    
T  16705744 taagttttctcctt 16705731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 34455993 - 34455885
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaacta 102  Q
    ||||||||||||| |||||||||||||||||||||||||||       |||||||||||| |||||| | |||| ||||||||||||| ||||||| |||    
T  34455993 atttcctcaaatctataattttctcaaagtttgttatatccaaaaaa-tatgtatttttaattaagaaccatacgaaaagcacctaaggaattgtaccta 34455895  T
Q  103 agttttctcc 112  Q
    ||||||||||    
T  34455894 agttttctcc 34455885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 9281408 - 9281519
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||       ||| ||||||||||||||| | |||| ||||| ||||||| ||||||| |    
T  9281408 tgatttcctcaaattcataattttctcaaagtttgttatatcc-aaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaattgtacc 9281506  T
Q  101 taagttttctcct 113  Q
    |||||||||||||    
T  9281507 taagttttctcct 9281519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 34490566 - 34490455
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| |||| |||||||  ||||||| |    
T  34490566 tgatttcctcagatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaagaattgtacc 34490468  T
Q  101 taagttttctcct 113  Q
    |||||||||||||    
T  34490467 taagttttctcct 34490455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 12850603 - 12850713
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| ||||||| || || ||||| | |    
T  12850603 tgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccatacgaaaagcatctgaggaattggacc 12850701  T
Q  101 taagttttctcc 112  Q
    ||||||||||||    
T  12850702 taagttttctcc 12850713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 22269832 - 22269722
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||| |   |||| |||| |||||||| ||||||| |    
T  22269832 tgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaaaaatcatacgaaaaacacctaaggaattgtacc 22269734  T
Q  101 taagttttctcc 112  Q
    ||||||||||||    
T  22269733 taagttttctcc 22269722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 2818776 - 2818671
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||       |||||||||||||||||||   |||| ||||||||||||| ||||||| |    
T  2818776 tgatttcctcaaatccataattttctcaaagtttgatatatcc-aaaaaatatgtatttttagttaagaatcatacgaaaagcacctaaggaattgtacc 2818678  T
Q  101 taagttt 107  Q
    |||||||    
T  2818677 taagttt 2818671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 6605845 - 6605737
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||       ||||||||||||||||||   ||||| |||||||| |||| ||||||| |    
T  6605845 tgatttcctcaaatgcataattttctcaaagtttgttatatcc-aaataatatgtatttttagttaag---aatacgaaaagcacataaggaattgtacc 6605750  T
Q  101 taagttttctcct 113  Q
    |||||||||||||    
T  6605749 taagttttctcct 6605737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 8111692 - 8111756
Alignment:
Q  60 ttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttttttaaatat 124  Q
    |||||||||| | |||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  8111692 ttagttaagaaccatacaaaaaggacctaagaaattgtaactaagttttctccatttttaaatat 8111756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 1924033 - 1923974
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctttttt 118  Q
    ||||||||||| | |||| ||||||||||||||||||||| |||||||||||||||||||    
T  1924033 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctcctttttt 1923974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 34490569 - 34490628
Alignment:
Q  54 gtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcct 113  Q
    |||||||||||||||| | |||| ||||||||||||| ||||||| ||||||||||||||    
T  34490569 gtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcct 34490628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 24101890 - 24101828
Alignment:
Q  54 gtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctttt 116  Q
    |||| ||||||||||| | |||| ||||||||||||| ||||||| |||||||||||||||||    
T  24101890 gtatatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctttt 24101828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 29229424 - 29229534
Alignment:
Q  1 tgatttcctcaaatccataattttctc-aaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaa 99  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||       ||||||||||||||||||| | |||| ||||| | ||||  |||||| |    
T  29229424 tgatttcctcaaatccataattttctcaaaagtttattatatcc-aaaaaatatgtatttttagttaagaaccatacgaaaagtaactaaagaattgt-a 29229521  T
Q  100 ctaagttttctcc 112  Q
    |||||||||||||    
T  29229522 ctaagttttctcc 29229534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 29342724 - 29342834
Alignment:
Q  1 tgatttcctcaaatccataattttctc-aaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaa 99  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||       ||||||||||||||||||| | |||| ||||| | ||||  |||||| |    
T  29342724 tgatttcctcaaatccataattttctcaaaagtttattatatcc-aaaaaatatgtatttttagttaagaaccatacgaaaagtaactaaagaattgt-a 29342821  T
Q  100 ctaagttttctcc 112  Q
    |||||||||||||    
T  29342822 ctaagttttctcc 29342834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 162
Target Start/End: Original strand, 4354849 - 4354895
Alignment:
Q  113 ttttttaaatatcaagtattattattaatcgtattatgtatcttcatttc 162  Q
    ||||||||||||||||||||   |||||||||||||||||||||||||||    
T  4354849 ttttttaaatatcaagtatt---attaatcgtattatgtatcttcatttc 4354895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43476056 - 43476014
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatcc 43  Q
    |||||||||||||| ||||||||||||||||||| ||||||||    
T  43476056 tgatttcctcaaattcataattttctcaaagtttattatatcc 43476014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 116
Target Start/End: Original strand, 6605866 - 6605909
Alignment:
Q  73 atacaaaaagcacctaagaaattgtaactaagttttctcctttt 116  Q
    |||||||||||||||||  ||||||| |||||||||||||||||    
T  6605866 atacaaaaagcacctaaagaattgtacctaagttttctcctttt 6605909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 7737183 - 7737238
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctt 114  Q
    |||||||||||   |||| ||||||||||||| ||||||| |||||||||||||||    
T  7737183 tttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttctcctt 7737238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 27920690 - 27920745
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctt 114  Q
    ||||||||||| | |||| ||||||| |||| |||||||| |||||||||||||||    
T  27920690 tttagttaagaaccatacgaaaagcagctaaaaaattgtacctaagttttctcctt 27920745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 9850819 - 9850860
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatc 42  Q
    |||||| || |||||||||||||||||||| |||||||||||    
T  9850819 tgattttcttaaatccataattttctcaaaatttgttatatc 9850860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 20892997 - 20893057
Alignment:
Q  53 tgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctt 114  Q
    |||||||||||||||||   |||| ||||||||||||| |||| | ||||||||||||||||    
T  20892997 tgtatttttagttaagaatcatacgaaaagcacctaaggaattat-actaagttttctcctt 20893057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 43858552 - 43858609
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctttt 116  Q
    ||||||||||| | |||| ||||| ||||||| ||||||| |||| ||||||||||||    
T  43858552 tttagttaagaaccatacgaaaagtacctaaggaattgtacctaaattttctcctttt 43858609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 45408743 - 45408796
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcc 112  Q
    |||| |||||| | |||| ||||||||||||| ||||||| |||||||||||||    
T  45408743 tttaattaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 45408796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 3116994 - 3117050
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttt 115  Q
    ||||||||||| | |||| ||||||| ||| | ||||||| ||||||||||||||||    
T  3116994 tttagttaagaaccatacgaaaagcagctatggaattgtacctaagttttctccttt 3117050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 7116478 - 7116438
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatatcc 43  Q
    ||||| ||||||||||||||||||||||| ||||| |||||    
T  7116478 atttcatcaaatccataattttctcaaagattgttctatcc 7116438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 43
Target Start/End: Original strand, 17434755 - 17434783
Alignment:
Q  15 ccataattttctcaaagtttgttatatcc 43  Q
    |||||||||||||||||||||||||||||    
T  17434755 ccataattttctcaaagtttgttatatcc 17434783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 22269838 - 22269894
Alignment:
Q  57 tttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcct 113  Q
    ||||||||||||| | |||| ||||||| ||||| |||||||  |||||||||||||    
T  22269838 tttttagttaagaaccatacgaaaagcatctaaggaattgtacgtaagttttctcct 22269894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 42713830 - 42713766
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttttttaaata 123  Q
    ||||||||||| | |||| |||| |||||||| |||| || |||| ||||||||||||| |||||    
T  42713830 tttagttaagaaccatacgaaaaacacctaaggaattatatctaaattttctcctttttgaaata 42713766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 4e-31; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 15546742 - 15546621
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | ||||||||| || ||||| ||||||| |    
T  15546742 tgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacaaaaaacaactaaggaattgtacc 15546644  T
Q  101 taagttttctccttttttaaata 123  Q
    |||||||||||||||| ||||||    
T  15546643 taagttttctccttttataaata 15546621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 885495 - 885384
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||||||||||||||||| ||||||| |    
T  885495 tgattttctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacc 885397  T
Q  101 taagttttctcct 113  Q
    |||||||||||||    
T  885396 taagttttctcct 885384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 8091172 - 8091052
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| ||||||||||||| ||||||| |    
T  8091172 tgatttccttaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtatc 8091074  T
Q  101 taagttttctccttttttaaat 122  Q
    ||| ||||||| ||||||||||    
T  8091073 taaattttctctttttttaaat 8091052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 13439806 - 13439692
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||| ||||| | |||| ||||| || |||| ||||||| |    
T  13439806 tgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagctaagaaccatacgaaaagtacttaaggaattgtacc 13439707  T
Q  101 taagttttctccttt 115  Q
    |||||||||||||||    
T  13439706 taagttttctccttt 13439692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 21380002 - 21380116
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||| |||||||||||||| |||||||||||||       ||||||||||||||||||| | |||| ||||||||||||| ||||||| |    
T  21380002 tgatttcctcaaattcataattttctcaatgtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacc 21380100  T
Q  101 taagttttctcctttt 116  Q
    ||||||||||||||||    
T  21380101 taagttttctcctttt 21380116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 11687204 - 11687314
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |       ||||||||||||||||||| | |||| ||||||| ||||| ||||||| |    
T  11687204 tgatttcctcaaatccataattttctcaaagtttgttatat-caaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacc 11687302  T
Q  101 taagttttctcc 112  Q
    ||||||||||||    
T  11687303 taagttttctcc 11687314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 20501816 - 20501706
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||| ||||||||||||||||||| |||||||||||||||       ||||||||||||||||||| | |||| |||| |||||||| |||||||||    
T  20501816 tgatttcttcaaatccataattttctcgaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtaac 20501718  T
Q  101 taagttttctcc 112  Q
    ||||||||||||    
T  20501717 taagttttctcc 20501706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 4890541 - 4890654
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||       ||||  ||||||||||||| | |||| ||||||||||||| ||||||| |    
T  4890541 tgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaaatatgcgtttttagttaagaaccatacgaaaagcacctaaggaattgtacc 4890640  T
Q  101 taagttttctcctt 114  Q
    ||| ||||||||||    
T  4890641 taaattttctcctt 4890654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 18998177 - 18998292
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||| |||||||||||||||||||||||||||||||        |||||||||||| |||||| | |||| ||||||||||||| ||||||| |    
T  18998177 tgatttcctcgaatccataattttctcaaagtttgttatatcaaaaaaaatatgtatttttaattaagaaccatacgaaaagcacctaaggaattgtagc 18998276  T
Q  101 taagttttctcctttt 116  Q
    ||| |||||| |||||    
T  18998277 taaattttctactttt 18998292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 3369095 - 3368985
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||| |||||||||||||||||||||||||| |       ||||||||||||||||||| | |||| ||||||||||||| |||||||      
T  3369095 tgatttcctcaaattcataattttctcaaagtttgttatattc-aaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtact 3368997  T
Q  101 taagttttctcc 112  Q
     |||||||||||    
T  3368996 caagttttctcc 3368985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 7808719 - 7808610
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||       ||||||||||||||||| | | | || |||| |||||||| ||||||| |    
T  7808719 tgatttcctcaaatctataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaaaaaccaaacgaaaaacacctaaggaattgtacc 7808621  T
Q  101 taagttttctc 111  Q
    |||||||||||    
T  7808620 taagttttctc 7808610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 14393674 - 14393575
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatcc--nnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgta 98  Q
    |||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||   |||| ||||||||||||| |||||||    
T  14393674 tgatttcctcaaatccataattttctcaaagtttgttatatccaaaaagaaatatgtatttttagttaagaatcatacgaaaagcacctaaggaattgta 14393575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 13172636 - 13172676
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatatcc 43  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13172636 atttcctcaaatccataattttctcaaagtttgttatatcc 13172676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 4238964 - 4238852
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatcc-nnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaa 99  Q
    |||||| ||||||||| ||||||||||||||||||||||||||        |||||||||||| || ||| | ||||||||||||| |||  |||||||     
T  4238964 tgattttctcaaatccttaattttctcaaagtttgttatatccaaaaaaaatatgtatttttaattgagaaccatacaaaaagcacataaagaattgtat 4238865  T
Q  100 ctaagttttctcc 112  Q
    |||| ||||||||    
T  4238864 ctaaattttctcc 4238852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 6433743 - 6433684
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctttttt 118  Q
    ||||||||||| | |||| |||||||||||||||||| || |||||||||||||||||||    
T  6433743 tttagttaagaaccatacgaaaagcacctaagaaattatacctaagttttctcctttttt 6433684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 29609111 - 29609000
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||| ||||||||||||||||||||||||||||| |||        |||||||||||||||||| | | || |||||||| |||  ||||||| |    
T  29609111 tgatttccttaaatccataattttctcaaagtttgttatctccaaaaaag-atgtatttttagttaagaaccacacgaaaagcacttaaagaattgtacc 29609013  T
Q  101 taagttttctcct 113  Q
    |||||||| ||||    
T  29609012 taagttttgtcct 29609000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 31764388 - 31764492
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaacta 102  Q
    |||| ||||||| |||||||||||||||||||||| |||||       ||||||| ||||||||||| | |||| ||||| | ||||||||||||| |||    
T  31764388 attttctcaaattcataattttctcaaagtttgttgtatccaaaaaa-tatgtatctttagttaagaactatacgaaaagtatctaagaaattgtaccta 31764486  T
Q  103 agtttt 108  Q
    ||||||    
T  31764487 agtttt 31764492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 111
Target Start/End: Original strand, 7808722 - 7808779
Alignment:
Q  54 gtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctc 111  Q
    |||||||||||||||| | |||| ||||||||||||| ||||||| ||||||||||||    
T  7808722 gtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 7808779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 8091180 - 8091235
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctt 114  Q
    ||||||||||| | |||| ||||||||||||| ||||||| |||||||||||||||    
T  8091180 tttagttaagaaccatacgaaaagcacctaagcaattgtacctaagttttctcctt 8091235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 11687200 - 11687137
Alignment:
Q  55 tatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctttttt 118  Q
    ||||||||||||||| | |||| ||||||| ||||| ||||||| |||||||||||||| ||||    
T  11687200 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcctatttt 11687137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 4890533 - 4890479
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcct 113  Q
    ||||||||||| | |||| |||| |||||||||||||||| ||||||||||||||    
T  4890533 tttagttaagaaccatacgaaaaacacctaagaaattgtacctaagttttctcct 4890479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 14393682 - 14393736
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcct 113  Q
    ||||||||||| | |||||||||||||||||| |||| || ||||||||||||||    
T  14393682 tttagttaagaaccatacaaaaagcacctaaggaattatacctaagttttctcct 14393736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 20501819 - 20501872
Alignment:
Q  54 gtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagtttt 108  Q
    |||||||||||||||| | |||| |||||||||||||||||||| ||||||||||    
T  20501819 gtatttttagttaagaaccatacgaaaagcacctaagaaattgt-actaagtttt 20501872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 21379994 - 21379940
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcct 113  Q
    ||||||||||| | |||| ||||||||||||| ||||||| ||||||||||||||    
T  21379994 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcct 21379940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 15546750 - 15546806
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttt 115  Q
    |||| |||||| | |||| ||||||||||||| ||||||| ||||||||||||||||    
T  15546750 tttaattaagaaccatacgaaaagcacctaaggaattgtacctaagttttctccttt 15546806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 17367118 - 17367158
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatat 41  Q
    ||||||| |||||| ||||||||||||||||||||||||||    
T  17367118 tgatttcatcaaattcataattttctcaaagtttgttatat 17367158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 118
Target Start/End: Original strand, 5416655 - 5416691
Alignment:
Q  82 gcacctaagaaattgtaactaagttttctcctttttt 118  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  5416655 gcacctaaggaattgtacctaagttttctcctttttt 5416691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 4e-31; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 24397306 - 24397415
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| ||||||||||||| ||||||| |    
T  24397306 tgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacc 24397405  T
Q  101 taagttttct 110  Q
    ||||||||||    
T  24397406 taagttttct 24397415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 15855953 - 15855837
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||| | |||| ||||||| ||||| ||||||| |    
T  15855953 tgatttcctcaaatccataattttctcaaagtttgttatatc-aaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacc 15855855  T
Q  101 taagttttctcctttttt 118  Q
    ||||||||||||||||||    
T  15855854 taagttttctcctttttt 15855837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 35420673 - 35420786
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |       ||||||||||||||||||| | |||| ||||||| ||||| ||||||| |    
T  35420673 tgatttcctcaaatccataattttctcaaagtttgttatat-caaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacc 35420771  T
Q  101 taagttttctccttt 115  Q
    |||||||||||||||    
T  35420772 taagttttctccttt 35420786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 16473065 - 16472947
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |       ||||||||||||||||||| | |||| ||||||| ||||| ||||||| |    
T  16473065 tgatttcctcaaatccataattttctcaaagtttgttatat-caaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacc 16472967  T
Q  101 taagttttctccttttttaa 120  Q
    |||||||| |||| ||||||    
T  16472966 taagttttttcctattttaa 16472947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 4266092 - 4265971
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||       ||||||||||||||||||| | |||| |||| |||||||||||||||| |    
T  4266092 tgatttcttcaaatccataattttcttaaagtttgttacatccaaaaaa-tatgtatttttagttaagaaccatacgaaaaacacctaagaaattgtacc 4265994  T
Q  101 taagttttctcctt-ttttaaat 122  Q
    |||||||||||||| ||||||||    
T  4265993 taagttttctccttattttaaat 4265971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 1138669 - 1138558
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| ||||||||| ||  ||||||| |    
T  1138669 tgattttctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccatacgaaaagcaccaaaagaattgtacc 1138571  T
Q  101 taagttttctcct 113  Q
    |||||||||||||    
T  1138570 taagttttctcct 1138558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 20476541 - 20476418
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||| |||||||||| |       ||||||||||||||||||| | |||| ||||||| |||   ||||||| |    
T  20476541 tgatttcctcaaatccataattttctcaaaatttgttatat-cacaaaaatatgtatttttagttaagaaccatacgaaaagcatctagagaattgtacc 20476443  T
Q  101 taagttttctccttttttaaatatc 125  Q
    |||||||||||||| ||| ||||||    
T  20476442 taagttttctccttattttaatatc 20476418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 21259791 - 21259902
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||  ||||||||||||||||||||||||||||       ||||||||||||||||||| | |||  ||||| ||||||| ||||||| |    
T  21259791 tgatttcctcaaaatcataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccataagaaaagtacctaaggaattgtacc 21259889  T
Q  101 taagttttctcct 113  Q
    ||| |||||||||    
T  21259890 taaattttctcct 21259902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 43539217 - 43539104
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||| || |||||||||||||||||||||||||||||||||       ||||||||| ||||| ||| | |||| ||||  |||||||||||||| ||    
T  43539217 tgattttcttaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttatagttcagaaccatacgaaaaatacctaagaaattgt-ac 43539120  T
Q  101 taagttttctcctttt 116  Q
    ||||||||||||||||    
T  43539119 taagttttctcctttt 43539104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 12744936 - 12744829
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||       ||||||||||||||||| | | ||||||||| ||||||| ||||||| |     
T  12744936 tgatttcctcaaattcataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaaaaaccatacaaaaaacacctaa-aaattgt-at 12744840  T
Q  101 taagttttctc 111  Q
    |||||||||||    
T  12744839 taagttttctc 12744829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 12808021 - 12807911
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||| |||||||||||||| |||||||||||||||| |       ||||||||||||||||| | | |||| |||| ||||||||||||||| |     
T  12808021 tgatttccttaaatccataattttttcaaagtttgttatat-ctaaaaaatatgtatttttagttaaaaaccatacgaaaaacacctaagaaattgt-at 12807924  T
Q  101 taagttttctcct 113  Q
    |||||||||||||    
T  12807923 taagttttctcct 12807911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 19976372 - 19976260
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||| | ||||||       || |||||||||||||||| | |||| |||| ||| ||| ||||| ||      
T  19976372 tgatttcctcaaatccataattttctcaaagtttatcatatccaaaaaaatacgtatttttagttaagaaccatacgaaaatcacataaaaaattatagt 19976273  T
Q  101 taagttttctcct 113  Q
    |||||||||||||    
T  19976272 taagttttctcct 19976260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 21262053 - 21261970
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcac 85  Q
    ||||||||||||||||| |||||||||||||||||||||||||       ||||||||||||||||||| | |||| ||||||||    
T  21262053 tgatttcctcaaatccacaattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccatacgaaaagcac 21261970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 13754354 - 13754467
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaacta 102  Q
    |||||||||||| |||||||||||||||||||| ||||| |       ||||||||||||||||||| | |||| |||| |||||||| |||||||  ||    
T  13754354 atttcctcaaattcataattttctcaaagtttgctatat-caaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaagtaattgtacata 13754452  T
Q  103 agttttctccttttt 117  Q
    | |||||||| ||||    
T  13754453 aattttctccatttt 13754467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 33629406 - 33629520
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatcc-nnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaa 99  Q
    |||||| ||||||||||||||||||||||||||||||||||||        ||| |||||||||||||||   |||| |||| || ||||| |||||||     
T  33629406 tgattttctcaaatccataattttctcaaagtttgttatatccaaaaaatatatatatttttagttaagaatcatacgaaaaacatctaaggaattgtac 33629505  T
Q  100 ctaagttttctcctt 114  Q
    |||| ||||||||||    
T  33629506 ctaaattttctcctt 33629520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 35276361 - 35276465
Alignment:
Q  9 tcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagtttt 108  Q
    |||||||||||||||||| ||||||| |||||||        | ||||||||||| ||||| | |||||||||||| |||| |||||||| |||||||||    
T  35276361 tcaaatccataattttcttaaagtttattatatctaaaaaaatgtgtatttttaggtaagaactatacaaaaagcatctaataaattgtatctaagtttt 35276460  T
Q  109 ctcct 113  Q
     ||||    
T  35276461 gtcct 35276465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 35420669 - 35420603
Alignment:
Q  55 tatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttttttaaa 121  Q
    ||||||||||||||| | |||| ||||||| ||||| ||||||| ||||||||||||||||| ||||    
T  35420669 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctccttttataaa 35420603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 108
Target Start/End: Original strand, 8364744 - 8364797
Alignment:
Q  55 tatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagtttt 108  Q
    ||||||||||||||| | |||||||||||||||||| ||||||| |||||||||    
T  8364744 tatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 8364797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 1456085 - 1456125
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatatcc 43  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  1456085 attttctcaaatccataattttctcaaagtttgttatatcc 1456125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 20476549 - 20476604
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctt 114  Q
    ||||||||||| | |||| ||||||||||||| ||||||| |||||||||||||||    
T  20476549 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctt 20476604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 115
Target Start/End: Original strand, 17583371 - 17583413
Alignment:
Q  73 atacaaaaagcacctaagaaattgtaactaagttttctccttt 115  Q
    |||| ||||||||||||||||||||| ||||||||||||||||    
T  17583371 atacgaaaagcacctaagaaattgtacctaagttttctccttt 17583413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 37655217 - 37655294
Alignment:
Q  5 ttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagca 84  Q
    |||||||||| ||||||||||||||||||||||||| |        ||||||||||||||||||| | ||||||||||||    
T  37655217 ttcctcaaattcataattttctcaaagtttgttataac--aaaaaatatgtatttttagttaagaaccatacaaaaagca 37655294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 2268723 - 2268776
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcc 112  Q
    ||||||||||| | |||||||||||| |||||||||| || |||||||||||||    
T  2268723 tttagttaagaaccatacaaaaagcatctaagaaattatacctaagttttctcc 2268776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 15855957 - 15856014
Alignment:
Q  55 tatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcc 112  Q
    ||||||||||||||| | |||| ||||||| ||||| ||||||| |||||||||||||    
T  15855957 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 15856014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 16473069 - 16473126
Alignment:
Q  55 tatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcc 112  Q
    ||||||||||||||| | |||| ||||||| ||||| ||||||| |||||||||||||    
T  16473069 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 16473126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 780855 - 780895
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatat 41  Q
    ||||||||| |||||||||||||||| ||||||||||||||    
T  780855 tgatttccttaaatccataattttcttaaagtttgttatat 780895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 1164866 - 1164967
Alignment:
Q  11 aaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttct 110  Q
    |||||||||||||| | ||||||| ||||||||       ||| |||||||| |||||| | |||| ||||||| ||||| ||||||| |||| ||||||    
T  1164866 aaatccataattttttaaaagtttattatatccaaaaaaatatttatttttaattaagaaccatacgaaaagcagctaaggaattgtacctaaattttct 1164965  T
Q  111 cc 112  Q
    ||    
T  1164966 cc 1164967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 33629398 - 33629342
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttt 115  Q
    ||||||||||| | |||| |||||||| |||| ||||||| ||||||||||||||||    
T  33629398 tttagttaagaaccataccaaaagcacataaggaattgtacctaagttttctccttt 33629342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 735385 - 735346
Alignment:
Q  2 gatttcctcaaatccataattttctcaaagtttgttatat 41  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  735385 gatttcatcaaattcataattttctcaaagtttgttatat 735346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 42
Target Start/End: Original strand, 32623286 - 32623317
Alignment:
Q  11 aaatccataattttctcaaagtttgttatatc 42  Q
    ||||||||||||||||||||||||||||||||    
T  32623286 aaatccataattttctcaaagtttgttatatc 32623317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 37552373 - 37552408
Alignment:
Q  5 ttcctcaaatccataattttctcaaagtttgttata 40  Q
    |||||||||| |||||||||||||||||||||||||    
T  37552373 ttcctcaaattcataattttctcaaagtttgttata 37552408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 780915 - 780964
Alignment:
Q  64 ttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcct 113  Q
    |||||| | |||| ||||||||||||||||||||| ||||||||| ||||    
T  780915 ttaagaaccatacgaaaagcacctaagaaattgtacctaagttttttcct 780964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 1138677 - 1138742
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttttttaaatat 124  Q
    ||||||||||| | |||| ||||||| ||| | ||||||| ||||||||||||||| |||| ||||    
T  1138677 tttagttaagaaccatacgaaaagcagctatggaattgtacctaagttttctccttctttatatat 1138742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 4913267 - 4913316
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagtttt 108  Q
    ||||||||||| | ||||||||| ||||||||||||||||  ||||||||    
T  4913267 tttagttaagaaccatacaaaaaacacctaagaaattgtacgtaagtttt 4913316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 1384389 - 1384421
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtt 33  Q
    ||||||||||||||| |||||||||||||||||    
T  1384389 tgatttcctcaaatctataattttctcaaagtt 1384421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 12257582 - 12257614
Alignment:
Q  8 ctcaaatccataattttctcaaagtttgttata 40  Q
    ||||||||||||||||| |||||||||||||||    
T  12257582 ctcaaatccataattttttcaaagtttgttata 12257614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 29141853 - 29141801
Alignment:
Q  64 ttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctttt 116  Q
    |||||| | |||| |||| |||||||| ||||||| |||||||||||||||||    
T  29141853 ttaagaaccatacgaaaaacacctaagcaattgtatctaagttttctcctttt 29141801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 34513479 - 34513515
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgtt 37  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  34513479 tgatttcttcaaacccataattttctcaaagtttgtt 34513515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 42522931 - 42522987
Alignment:
Q  52 atgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagtttt 108  Q
    |||||||||||||||||| | | ||||||| ||||||| ||||| || |||||||||    
T  42522931 atgtatttttagttaagaaccaaacaaaaaacacctaaaaaattatatctaagtttt 42522987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 15882311 - 15882191
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||| |||||||||||||| ||||||||||| |||||||||       ||||||||||||||||||| | |||||||||||||||||| ||||||| |    
T  15882311 tgattttctcaaatccataatattctcaaagttagttatatccaaaaaaatatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacc 15882212  T
Q  101 taagttttctccttttttaaa 121  Q
    ||||||||||||||| |||||    
T  15882211 taagttttctcctttattaaa 15882191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 23940865 - 23940976
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||| ||||||||||||||||||||||||         ||||||||||||||||| | | |||| ||||||||||||| |||||||||    
T  23940865 tgatttcctcaaatccgtaattttctcaaagtttgttatatttaaaaaaatatgtatttttagttaaaaaccatacgaaaagcacctaaggaattgtaac 23940964  T
Q  101 taagttttctcc 112  Q
    ||||||||||||    
T  23940965 taagttttctcc 23940976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 29781022 - 29781132
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaacta 102  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| ||||||| ||||| ||||| | |||    
T  29781022 atttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattggaccta 29781120  T
Q  103 agttttctcctt 114  Q
    ||||||||||||    
T  29781121 agttttctcctt 29781132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 8210433 - 8210322
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||| ||| |||||||||||   |||| ||||||||||||| ||||||| |    
T  8210433 tgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatatatatttagttaagaatcatacgaaaagcacctaaggaattgtacc 8210335  T
Q  101 taagttttctcct 113  Q
    |||||||||||||    
T  8210334 taagttttctcct 8210322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 17426689 - 17426802
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatcc-nnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaa 99  Q
    ||||||||||||||| |||||||||||||||||||||||||||        |||  |||||||||||||| | |||| |||||||||||| ||||||||     
T  17426689 tgatttcctcaaatctataattttctcaaagtttgttatatccaaaaaaaatatacatttttagttaagaaccatacgaaaagcacctaaaaaattgtac 17426788  T
Q  100 ctaagttttctcct 113  Q
    ||||||||||||||    
T  17426789 ctaagttttctcct 17426802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 33100708 - 33100820
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaacta 102  Q
    ||||||||||||||||||||||||||||||||||||||| |       ||||| ||||||||||||| |  ||| |||||||| |||||||||||| |||    
T  33100708 atttcctcaaatccataattttctcaaagtttgttatat-caaaaaaatatgtttttttagttaagaaccgtacgaaaagcacataagaaattgtaccta 33100806  T
Q  103 agttttctcctttt 116  Q
    ||||||||| ||||    
T  33100807 agttttctcttttt 33100820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 37114348 - 37114239
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||| || |||||||||||||||||||||||| ||||||||       |||||||||||| |||||| | |||| ||||||||||||| ||||||| |    
T  37114348 tgattttcttaaatccataattttctcaaagtttattatatccaaaaaa-tatgtatttttaattaagaaccatacgaaaagcacctaaggaattgtacc 37114250  T
Q  101 taagttttctc 111  Q
    |||||||||||    
T  37114249 taagttttctc 37114239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 38520128 - 38520015
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||       ||| ||||||||||||||| | |||| ||||||| ||||| |||| || |    
T  38520128 tgatttcctcaaattcataattttctcaaagtttgttatatcc-aaaaaatatatatttttagttaagaaccatacgaaaagcaactaaggaattatacc 38520030  T
Q  101 taagttttctccttt 115  Q
    ||| |||||||||||    
T  38520029 taaattttctccttt 38520015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 12234577 - 12234462
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagttt-gttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaa 99  Q
    |||||||||||||| ||||||||||||||||||| |||||||||       ||||||||||||||||||| | |||| ||||||||| ||  |||| ||     
T  12234577 tgatttcctcaaattcataattttctcaaagttttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacccaaagaattatac 12234479  T
Q  100 ctaagttttctcctttt 116  Q
    |||||||||||||||||    
T  12234478 ctaagttttctcctttt 12234462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 112
Target Start/End: Complemental strand, 33100703 - 33100645
Alignment:
Q  54 gtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcc 112  Q
    |||||||||||||||| | |||| ||||||||||||||||||||| |||||||||||||    
T  33100703 gtatttttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctcc 33100645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 40891123 - 40891081
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatcc 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  40891123 tgatttcctcaaatccataattttctcaaagtttgttatatcc 40891081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 24211341 - 24211449
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaacta 102  Q
    ||||||| || ||||||||||||||| |||||||||||||        ||||||||| || |||||| | |||| ||||||||||||| ||||||| |||    
T  24211341 atttccttaattccataattttctcatagtttgttatatc-taaaaaatatgtatttctatttaagaaccatacgaaaagcacctaaggaattgtaccta 24211439  T
Q  103 agttttctcc 112  Q
    ||||||||||    
T  24211440 agttttctcc 24211449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 38629584 - 38629473
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||| ||||||||||||||||||| ||||||||       ||||||||||||||||||| | |||| |||||||  |||  |||||||      
T  38629584 tgatttcctcaaattcataattttctcaaagtttattatatcc-aaaaaatatgtatttttagttaagaaccatacgaaaagcatttaaagaattgtact 38629486  T
Q  101 taagttttctcct 113  Q
    ||| |||||||||    
T  38629485 taaattttctcct 38629473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 4262037 - 4262077
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatat 41  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  4262037 tgatttcctcaagtccataattttctcaaagtttgttatat 4262077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 15882319 - 15882375
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttt 115  Q
    ||||||||||| | |||| ||||||||||||| ||||||| ||||||||||||||||    
T  15882319 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctccttt 15882375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 11828659 - 11828698
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatatc 42  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  11828659 atttcctcaaatccattattttctcaaagtttgttatatc 11828698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25264288 - 25264328
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatat 41  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
T  25264288 tgatttcctcaaattcataattttcttaaagtttgttatat 25264328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 12234585 - 12234640
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctt 114  Q
    ||||||||| | | |||| ||||||| ||||||||||||| |||||||||||||||    
T  12234585 tttagttaataaccatacgaaaagcatctaagaaattgtacctaagttttctcctt 12234640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 17426681 - 17426626
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctt 114  Q
    ||||||||||| | |||| ||||||||||||  ||||||| |||||||||||||||    
T  17426681 tttagttaagaaccatacgaaaagcacctaatgaattgtacctaagttttctcctt 17426626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 24211331 - 24211272
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctttttt 118  Q
    |||| |||||| | |||| ||||||||||||  ||||||| |||||||||||||||||||    
T  24211331 tttaattaagaaccatacgaaaagcacctaaagaattgtacctaagttttctcctttttt 24211272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 40891131 - 40891182
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttct 110  Q
    ||||||||||| | |||| ||||||||||||| ||||||| |||||||||||    
T  40891131 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 40891182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 11828713 - 11828775
Alignment:
Q  51 tatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcct 113  Q
    ||||||||||||||||||| | |||  |||||||  |||| ||||||| ||||||||||||||    
T  11828713 tatgtatttttagttaagaacgatatgaaaagcaagtaaggaattgtacctaagttttctcct 11828775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 24741876 - 24741822
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcct 113  Q
    ||||||||||| | |||| ||||||||||||| ||||||| ||||||||| ||||    
T  24741876 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttttcct 24741822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 35467288 - 35467350
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttttttaaa 121  Q
    ||||||||||| | |||| |||||||| |||| |||||||  |||||||| ||||||||||||    
T  35467288 tttagttaagaaccatacgaaaagcacataaggaattgtacgtaagttttttccttttttaaa 35467350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 38629592 - 38629646
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcct 113  Q
    ||||||||||| | |||| |||| |||||||| ||||||| ||||||||||||||    
T  38629592 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctcct 38629646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 38515614 - 38515585
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  38515614 tgatttcctcaaatccataattttctcaaa 38515585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 5356234 - 5356294
Alignment:
Q  51 tatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctc 111  Q
    |||||||||||| ||||||   |||| |||| |||||| ||||||||| ||||||||||||    
T  5356234 tatgtatttttaattaagaatcatacgaaaaacacctacgaaattgtatctaagttttctc 5356294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 24741884 - 24741924
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatat 41  Q
    |||||||||||||||||| ||||||||| ||||| ||||||    
T  24741884 tgatttcctcaaatccatgattttctcagagtttattatat 24741924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 29869941 - 29869973
Alignment:
Q  8 ctcaaatccataattttctcaaagtttgttata 40  Q
    |||||||||| ||||||||||||||||||||||    
T  29869941 ctcaaatccacaattttctcaaagtttgttata 29869973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 1299022 - 1298910
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||||||||||||||||| ||||||| |    
T  1299022 tgattttctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacc 1298924  T
Q  101 taagttttctcctt 114  Q
    ||||||||||||||    
T  1298923 taagttttctcctt 1298910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 530732 - 530840
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaacta 102  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| ||||||||||||| ||||||| |||    
T  530732 atttcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtaccta 530830  T
Q  103 agttttctcc 112  Q
    ||||||||||    
T  530831 agttttctcc 530840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 13204487 - 13204376
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||||||| | |||||||||| ||||||| ||||||| |    
T  13204487 tgatttcctcaaatccataattttcacaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacaaaaagtacctaagtaattgtatc 13204389  T
Q  101 taagttttctcct 113  Q
    |||||||||||||    
T  13204388 taagttttctcct 13204376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 27434718 - 27434609
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaacta 102  Q
    |||||||||||| ||||||||||||||||||||||||||||        |||||||||||||||||| | ||||||||||||| |||||||||||| |||    
T  27434718 atttcctcaaattcataattttctcaaagtttgttatatccaaaaaaa-atgtatttttagttaagaactatacaaaaagcacataagaaattgtaccta 27434620  T
Q  103 agttttctcct 113  Q
    |||||||||||    
T  27434619 agttttctcct 27434609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 42274553 - 42274663
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||| ||||||||||||||| | |||| |||| |||||||| ||||||| |    
T  42274553 tgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatatatttttagttaagaaccatacgaaaaacacctaaggaattgtacc 42274652  T
Q  101 taagttttctc 111  Q
    |||||||||||    
T  42274653 taagttttctc 42274663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 18417767 - 18417658
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||| ||||||||||||||| | |||| ||||||||||||| ||||||| |    
T  18417767 tgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatatatttttagttaagaaccatacgaaaagcacctaaggaattgtacc 18417669  T
Q  101 taagttttctc 111  Q
    |||||||||||    
T  18417668 taagttttctc 18417658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 20435201 - 20435314
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||       ||||||||||||||||||| | |||| ||||||||||||  ||||||| |    
T  20435201 tgatttcctcaaatccataattttctcgaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaagaattgtacc 20435299  T
Q  101 taagttttctccttt 115  Q
    |||||||||||||||    
T  20435300 taagttttctccttt 20435314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 52824347 - 52824236
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaacta 102  Q
    |||||||||||||||||||||||||||||||| |||||||        ||||||||||||||||||| | |||| ||||||||||||| ||||||| |||    
T  52824347 atttcctcaaatccataattttctcaaagtttattatatc-taaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtaccta 52824249  T
Q  103 agttttctccttt 115  Q
    |||||||||||||    
T  52824248 agttttctccttt 52824236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 28809908 - 28810024
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||| ||||||||||||||||||||||| ||||||||||||       ||||||||| ||||||||| | |||| ||||||| ||||||||||||| |    
T  28809908 tgattttctcaaatccataattttctcaaaatttgttatatccaaaaaa-tatgtatttctagttaagaaccataccaaaagcagctaagaaattgtacc 28810006  T
Q  101 taagttttctcctttttt 118  Q
    ||||||||||||| ||||    
T  28810007 taagttttctcctatttt 28810024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 4552895 - 4552776
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||| ||||||||||||| | | |||  |||||||| |||| ||||||| |    
T  4552895 tgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatttatttttagttaaaaaccatatgaaaagcacttaaggaattgtacc 4552797  T
Q  101 taagttttctccttttttaaa 121  Q
    ||||||||||||||| |||||    
T  4552796 taagttttctcctttattaaa 4552776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 24969602 - 24969715
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnnta--tgtatttttagttaagaccaatacaaaaagcacctaagaaattgta 98  Q
    |||||||||||||| ||||||||||||||||||||||||||||        |  ||||||||||||||||| | |||| ||||||||||||| |||||||    
T  24969602 tgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaaaaaaatgtatttttagttaagaactatacgaaaagcacctaaggaattgta 24969701  T
Q  99 actaagttttctcc 112  Q
     |||||||||||||    
T  24969702 cctaagttttctcc 24969715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 55107634 - 55107524
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||       ||||||||||||||||||| | |||  |||||||| |||| ||||||| |    
T  55107634 tgatttcctcaaatgcataattttctcaaagtttgttatatcc-aaataatatgtatttttagttaagaaccatatgaaaagcacataaggaattgtacc 55107536  T
Q  101 taagttttctcc 112  Q
    ||||||||||||    
T  55107535 taagttttctcc 55107524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 35360786 - 35360671
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||| ||||||||||||||||||||||||||||||| |       ||||||||||||||||||| | |||| ||||  |||||| ||||||| ||    
T  35360786 tgatttccttaaatccataattttctcaaagtttgttatat-ctaaaaaatatgtatttttagttaagaaccatacgaaaaatacctaataaattgt-ac 35360689  T
Q  101 taagttttctcctttttt 118  Q
    ||||||||||||||||||    
T  35360688 taagttttctcctttttt 35360671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 4688308 - 4688418
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||| || |||||||||||||||||||||||||       |||||||||||| |||||| | |||| |||| || ||||| ||||||| |    
T  4688308 tgatttcctcaaattcacaattttctcaaagtttgttatatccaaaaaaatatgtatttttaattaagaaccatacgaaaatcatctaaggaattgtacc 4688407  T
Q  101 taagttttctc 111  Q
    |||||||||||    
T  4688408 taagttttctc 4688418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 24915855 - 24915971
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatcc----nnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattg 96  Q
    |||||| ||||||||||||||||||||||||||||||||||||           ||||||||||||||||||| | || ||||||| || ||||||||||    
T  24915855 tgattttctcaaatccataattttctcaaagtttgttatatccaaaaaaaataatatgtatttttagttaagaaccat-caaaaagtacataagaaattg 24915953  T
Q  97 taactaagttttctcctt 114  Q
    || |||||||||||||||    
T  24915954 tacctaagttttctcctt 24915971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 4895082 - 4894967
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaa---agcacctaagaaattgt 97  Q
    |||||||||||||| |||||||||||||||||||||||||| |       ||||||||||||||||||| | ||||||||   || || |||| ||||||    
T  4895082 tgatttcctcaaattcataattttctcaaagtttgttatattc-aaaaaatatgtatttttagttaagaactatacaaaaaacagtacataaggaattgt 4894984  T
Q  98 aactaagttttctcctt 114  Q
    | |||||||||||||||    
T  4894983 acctaagttttctcctt 4894967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 56552171 - 56552064
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||         ||||||||||||| ||| | |||||||||||||||||| || |||| |    
T  56552171 tgatttcctcaaatccataattttctcaaagtttgttataaccaaggaaa-gtgtatttttagttgagaaccatacaaaaagcacctaaggaaatgtacc 56552073  T
Q  101 taagttttc 109  Q
    | |||||||    
T  56552072 tgagttttc 56552064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 2272476 - 2272371
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||| |||||||||||||| |||||||||||| |||||       | |||||||| |||||||| | ||| ||||||||||||| ||||||||||    
T  2272476 tgatttccttaaatccataattttatcaaagtttgttctatccaaaaaaat-tgtatttt-agttaagaaccatataaaaagcacctaaaaaattgtaac 2272379  T
Q  101 taagtttt 108  Q
    ||||||||    
T  2272378 taagtttt 2272371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 23928628 - 23928738
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||        || |||||||||||||||   ||||  |||||||||||| |||||||      
T  23928628 tgatttcctcaaatccataattttctcaaaatttgttatatccaaaaaaa-atatatttttagttaagaatcatacgcaaagcacctaaggaattgtaca 23928726  T
Q  101 taagttttctcc 112  Q
    ||||||||||||    
T  23928727 taagttttctcc 23928738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 530722 - 530667
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctt 114  Q
    ||||||||||| | |||||||||||||||||| ||||||| |||||||||||||||    
T  530722 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcctt 530667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 118
Target Start/End: Original strand, 55107642 - 55107701
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctttttt 118  Q
    |||||| |||| | |||||||||||||||||| ||||||| |||||||||||||||||||    
T  55107642 tttagtaaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcctttttt 55107701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 4688300 - 4688242
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttttt 117  Q
    ||||||||||| | |||| ||||||||||||||||||||| |||||||||||| |||||    
T  4688300 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctctttttt 4688242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 28809899 - 28809845
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcct 113  Q
    ||||||||| | |||||| ||||||||||||||||||||| ||||||||||||||    
T  28809899 tttagttaaaaacaataccaaaagcacctaagaaattgtacctaagttttctcct 28809845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 32318781 - 32318823
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatcc 43  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  32318781 tgatttcctcagatccataattttctcaaagtttgttatatcc 32318823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21048766 - 21048807
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatc 42  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  21048766 tgatttcctcaaatccataattttctcgaagtttgttatatc 21048807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 3422482 - 3422423
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctttttt 118  Q
    |||| |||||| | |||| ||||||||||||||||||||| |||||||||||||| ||||    
T  3422482 tttaattaagaactatacgaaaagcacctaagaaattgtacctaagttttctcctatttt 3422423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 24915847 - 24915792
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctt 114  Q
    ||||||||||| | |||| ||||||||||||| ||||||| |||||||||||||||    
T  24915847 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctt 24915792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 42274545 - 42274486
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctttttt 118  Q
    ||||||||||| | |||| ||||||| ||||| ||||||| |||||||||||||||||||    
T  42274545 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcctttttt 42274486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 52587382 - 52587417
Alignment:
Q  7 cctcaaatccataattttctcaaagtttgttatatc 42  Q
    ||||||||||||||||||||||||||||||||||||    
T  52587382 cctcaaatccataattttctcaaagtttgttatatc 52587417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 18417775 - 18417829
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcct 113  Q
    |||| |||||| | |||||||||||||||||| ||||||| ||||||||||||||    
T  18417775 tttaattaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcct 18417829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 36030997 - 36031031
Alignment:
Q  7 cctcaaatccataattttctcaaagtttgttatat 41  Q
    |||||||||||||||||||||||||||||||||||    
T  36030997 cctcaaatccataattttctcaaagtttgttatat 36031031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 55049461 - 55049503
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatcc 43  Q
    ||||||||||||| |||||||||| ||||||||||||||||||    
T  55049461 tgatttcctcaaacccataattttttcaaagtttgttatatcc 55049503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 24294575 - 24294536
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatatc 42  Q
    |||||||||||| | |||||||||||||||||||||||||    
T  24294575 atttcctcaaattcgtaattttctcaaagtttgttatatc 24294536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 122
Target Start/End: Complemental strand, 32318773 - 32318710
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttttttaaat 122  Q
    ||||||||||| | |||| |||||||| |||| ||||||| ||||||||||||  |||||||||    
T  32318773 tttagttaagaaccatacgaaaagcacataaggaattgtacctaagttttctctatttttaaat 32318710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 1299030 - 1299084
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcct 113  Q
    ||||||||||| | |||  ||||||||||||| ||||||| ||||||||||||||    
T  1299030 tttagttaagaaccataagaaaagcacctaaggaattgtacctaagttttctcct 1299084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 11330140 - 11330102
Alignment:
Q  78 aaaagcacctaagaaattgtaactaagttttctcctttt 116  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  11330140 aaaagcatctaagaaattgtatctaagttttctcctttt 11330102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 3422490 - 3422523
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagttt 34  Q
    |||||| |||||||||||||||||||||||||||    
T  3422490 tgattttctcaaatccataattttctcaaagttt 3422523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 27434728 - 27434781
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcc 112  Q
    ||||||||||| | |||| ||||||||||||| |||||||  ||||||||||||    
T  27434728 tttagttaagaaccatacgaaaagcacctaaggaattgtacttaagttttctcc 27434781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 43486253 - 43486196
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctttt 116  Q
    ||||||||||| | |||  ||||| ||||||| ||||||| |||||||||||||||||    
T  43486253 tttagttaagaaccataggaaaagtacctaaggaattgtacctaagttttctcctttt 43486196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 55049453 - 55049400
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcc 112  Q
    ||||||||||| | |||| ||||||||||||| |||||||  ||||||||||||    
T  55049453 tttagttaagaactatacgaaaagcacctaaggaattgtacataagttttctcc 55049400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 4552903 - 4552959
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttt 115  Q
    ||||||||||| | ||||| ||||||  |||| ||||||| ||||||||||||||||    
T  4552903 tttagttaagaaccatacagaaagcatataaggaattgtacctaagttttctccttt 4552959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 24969594 - 24969538
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttt 115  Q
    ||||||||||| | |||| ||||||||||||  ||||||| ||||||||||| ||||    
T  24969594 tttagttaagaaccatacgaaaagcacctaaagaattgtacctaagttttctgcttt 24969538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 6e-30; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 10441319 - 10441434
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| |  ||| ||||||||||||| ||||||| |    
T  10441319 tgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccgtaccaaaagcacctaaggaattgtacc 10441417  T
Q  101 taagttttctccttttt 117  Q
    |||||||||||||||||    
T  10441418 taagttttctccttttt 10441434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 4072334 - 4072447
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| |||| |||||||| ||||||| |    
T  4072334 tgatttcctcgaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtacc 4072433  T
Q  101 taagttttctcctt 114  Q
    ||||||||||||||    
T  4072434 taagttttctcctt 4072447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 12838187 - 12838074
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||||||||||||||||| |||||||      
T  12838187 tgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtaca 12838089  T
Q  101 taagttttctccttt 115  Q
    |||||||||| ||||    
T  12838088 taagttttcttcttt 12838074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 3970552 - 3970664
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| ||||| ||||||||||||||| |    
T  3970552 tgatttccttaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagtacctaagaaattgtacc 3970650  T
Q  101 taagttttctcctt 114  Q
    ||||||||||||||    
T  3970651 taagttttctcctt 3970664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 21969218 - 21969329
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| ||||||||||||| ||||||| |    
T  21969218 tgatttccttaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacc 21969316  T
Q  101 taagttttctcct 113  Q
    |||||||||||||    
T  21969317 taagttttctcct 21969329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 21991654 - 21991765
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| ||||||||||||| ||||||| |    
T  21991654 tgatttccttaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacc 21991752  T
Q  101 taagttttctcct 113  Q
    |||||||||||||    
T  21991753 taagttttctcct 21991765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 25488402 - 25488513
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||| ||| |||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||||||||||||||||| ||||||| |    
T  25488402 tgatttcttcatatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacc 25488500  T
Q  101 taagttttctcct 113  Q
    |||||||||||||    
T  25488501 taagttttctcct 25488513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 25561121 - 25561010
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||| ||| |||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||||||||||||||||| ||||||| |    
T  25561121 tgatttcttcatatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacc 25561023  T
Q  101 taagttttctcct 113  Q
    |||||||||||||    
T  25561022 taagttttctcct 25561010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 36822821 - 36822931
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| |||||||||||| |||||||| |    
T  36822821 tgatttcctcagatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaaaaattgtacc 36822919  T
Q  101 taagttttctcc 112  Q
    ||||||||||||    
T  36822920 taagttttctcc 36822931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 36657494 - 36657606
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |       ||||||||||||||||||| | |||| ||||||| ||||| ||||||| |    
T  36657494 tgatttcctcaaatccataattttctcaaagtttgttatat-caaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacc 36657592  T
Q  101 taagttttctcctt 114  Q
    ||||||||||||||    
T  36657593 taagttttctcctt 36657606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 157031 - 157143
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaacta 102  Q
    |||||||||||||||||||||||||||||||||||||||         ||||||||||||| ||||| | |||| |||||||||||||||||||||  ||    
T  157031 atttcctcaaatccataattttctcaaagtttgttatataaaaaaaaatatgtatttttagctaagaactataccaaaagcacctaagaaattgtatata 157130  T
Q  103 agttttctccttt 115  Q
    |||||||||||||    
T  157131 agttttctccttt 157143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 25446360 - 25446250
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| ||||||| ||||| |||||| ||    
T  25446360 tgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaagca-ctaaggaattgt-ac 25446263  T
Q  101 taagttttctcct 113  Q
    |||||||||||||    
T  25446262 taagttttctcct 25446250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 45487909 - 45487797
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||| |||||||||||||| |||||||||||||       ||||||||||||||||||| | |||| ||||||||||||| ||||||| |    
T  45487909 tgatttcctcaaattcataattttctcaatgtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacc 45487811  T
Q  101 taagttttctcctt 114  Q
    ||||||||||||||    
T  45487810 taagttttctcctt 45487797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 8831851 - 8831744
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||       ||||||||||||||| ||| | |||| ||||||||||||| ||||||| |    
T  8831851 tgatttcttcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagtttagaaccatacgaaaagcacctaaggaattgtacc 8831752  T
Q  101 taagtttt 108  Q
    ||||||||    
T  8831751 taagtttt 8831744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 10254679 - 10254564
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||| ||||||||||||||||| ||||||||||||||||||       ||||||||||||||||||| | |||  ||||||||||||| ||||||| |    
T  10254679 tgattttctcaaatccataattttttcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatatgaaaagcacctaaggaattgtacc 10254580  T
Q  101 taagttttctcctttt 116  Q
    ||||||||||| ||||    
T  10254579 taagttttctcttttt 10254564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 5530002 - 5529892
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||| | ||||| ||||||||||||||||||| |||||||       ||||||||||||||||||| | |||| ||||||||||||||||||||| |    
T  5530002 tgatttctttaaatctataattttctcaaagtttgatatatccaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaagaaattgtacc 5529903  T
Q  101 taagttttctc 111  Q
    |||||||||||    
T  5529902 taagttttctc 5529892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 13078224 - 13078334
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||       |||||||||||||||||||   |||| ||||| ||||||||||||||| |    
T  13078224 tgatttccttaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaatcatacgaaaagtacctaagaaattgtacc 13078322  T
Q  101 taagttttctcc 112  Q
    ||||||||||||    
T  13078323 taagttttctcc 13078334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 10117624 - 10117511
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaacta 102  Q
    |||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||  ||||||||||||| || |||| |||    
T  10117624 attttctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatatgaaaagcacctaaggaactgtaccta 10117525  T
Q  103 agttttctcctttt 116  Q
    ||||||||| ||||    
T  10117524 agttttctcttttt 10117511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 12789716 - 12789603
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||| ||||||||| ||||||||||||||||||       ||||||||||||||||||| | |||| |||| |||||||| ||||||| |    
T  12789716 tgatttcctcaaattcataattttttcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtacc 12789618  T
Q  101 taagttttctccttt 115  Q
    |||||||||||||||    
T  12789617 taagttttctccttt 12789603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 43639142 - 43639251
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||       ||| |||||||||||||||   |||| ||||||||||||| ||||||| |    
T  43639142 tgatttcttcaaatccataattttctcaaagtttgttatatccaaaaaaatatatatttttagttaagaatcatacgaaaagcacctaaggaattgtacc 43639241  T
Q  101 taagttttct 110  Q
    ||||||||||    
T  43639242 taagttttct 43639251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 26906564 - 26906453
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||       ||| ||||||||||||||| | |||| ||||| ||||||| ||||||| |    
T  26906564 tgatttcctcaaattcataattttctcaaagtttgttatatcc-aaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaattgtacc 26906466  T
Q  101 taagttttctcct 113  Q
    |||||||||||||    
T  26906465 taagttttctcct 26906453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 32237455 - 32237566
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||| |||| |||||||||||||||||||||||||||||||       |||||||||||| |||||| | |||| ||||||||||||| ||||||| |    
T  32237455 tgattttctcagatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttaattaagaaccatacgaaaagcacctaaggaattgtacc 32237553  T
Q  101 taagttttctcct 113  Q
    |||||||||||||    
T  32237554 taagttttctcct 32237566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 55340354 - 55340465
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||  ||||  ||||||| ||||||| |    
T  55340354 tgattttctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatatgaaaaatacctaaggaattgtatc 55340453  T
Q  101 taagttttctcc 112  Q
    ||||||||||||    
T  55340454 taagttttctcc 55340465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 10017224 - 10017110
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||| ||||||||||||||||| ||||||||||||||||||       ||||||||||||||||||| | |||  ||||||||||||| ||||||| |    
T  10017224 tgattttctcaaatccataattttttcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatatgaaaagcacctaaggaattgtacc 10017126  T
Q  101 taagttttctcctttt 116  Q
    ||||||||||| ||||    
T  10017125 taagttttctcttttt 10017110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 36278817 - 36278927
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||       ||| ||||||||||||||| | |||| ||||| ||||||| ||||||| |    
T  36278817 tgatttcctcaaattcataattttctcaaagtttgttatatcc-aaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaattgtacc 36278915  T
Q  101 taagttttctcc 112  Q
    ||||||||||||    
T  36278916 taagttttctcc 36278927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 404155 - 404038
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||| || |||||||||||||||||||||||||||       ||| ||||||||||||| |   |||| |||||||||||||||||||||      
T  404155 tgatttcctcaagtctataattttctcaaagtttgttatatccaaaaaaatatttatttttagttaaaaatcatacgaaaagcacctaagaaattgtacg 404056  T
Q  101 taagttttctcctttttt 118  Q
    ||||||||||||| ||||    
T  404055 taagttttctcctatttt 404038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 39850405 - 39850517
Alignment:
Q  1 tgatttcctcaaatccataattttctca-aagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaa 99  Q
    |||||||||||||||||||||||||||| |||||||||||||||       ||| |||||||||||||||   |||| ||||||||||||| |||||||     
T  39850405 tgatttcctcaaatccataattttctcacaagtttgttatatcc-aaaaaatatatatttttagttaagaatcatacgaaaagcacctaaggaattgtac 39850503  T
Q  100 ctaagttttctcct 113  Q
    ||||||||||||||    
T  39850504 ctaagttttctcct 39850517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 46664284 - 46664165
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaacta 102  Q
    |||||||||||| ||||||||||||||||||||||||||         ||||||||||||||||||| | |||| ||||  ||||||||||||||| |||    
T  46664284 atttcctcaaattcataattttctcaaagtttgttatatt-aaaaaaatatgtatttttagttaagaactatacgaaaaatacctaagaaattgtaccta 46664186  T
Q  103 agttttctccttttttaaata 123  Q
    | ||||||||||||| |||||    
T  46664185 aattttctcctttttaaaata 46664165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 36329245 - 36329352
Alignment:
Q  5 ttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaag 104  Q
    |||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| ||||||||||||  ||||||| |||      
T  36329245 ttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaagaattgtagctacc 36329343  T
Q  105 ttttctcct 113  Q
    |||||||||    
T  36329344 ttttctcct 36329352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 45712964 - 45713071
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||||||| |||||||||| ||||||||||||||||||       ||||||||||||||| ||| | |||| ||||||||||||| ||||||| |    
T  45712964 tgatttcctcaaagccataattttatcaaagtttgttatatcc-aaaaaatatgtatttttagtttagaaccatacgaaaagcacctaaggaattgtacc 45713062  T
Q  101 taagttttc 109  Q
    |||||||||    
T  45713063 taagttttc 45713071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 22101275 - 22101193
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| ||||||    
T  22101275 tgatttcctcaaatccataattttctcaaagtttgttatatccaacaaaatatgtatttttagttaagaaccatacgaaaagc 22101193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 43150590 - 43150480
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||       ||||||||||||||||| | | |||| |||||||||| || ||||| | |    
T  43150590 tgatttcctcaaattcataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaaaaaccatacgaaaagcacctgaggaattgcacc 43150492  T
Q  101 taagttttctcc 112  Q
    ||||||||||||    
T  43150491 taagttttctcc 43150480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 13724048 - 13724163
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||| |||||| ||||||||||||||||||||||||||||       ||||||||||||||||| |   |||| |||| || ||||| ||||||| |    
T  13724048 tgatttcttcaaattcataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaaaaattatacgaaaaacatctaaggaattgtacc 13724147  T
Q  101 taagttttctcctttt 116  Q
    |||| |||||||||||    
T  13724148 taagatttctcctttt 13724163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 22176219 - 22176137
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagc 83  Q
    |||||||||||||||||||||||||||||||||||| ||||||       ||||||||||||||||||| | |||| ||||||    
T  22176219 tgatttcctcaaatccataattttctcaaagtttgtaatatccaacaaaatatgtatttttagttaagaaccatacgaaaagc 22176137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 1476612 - 1476726
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||| |||||||||||| |||||||||||||||| ||        | ||||||||||||||||| | |||  ||||||||||||| ||||||| |    
T  1476612 tgatttccttaaatccataattctctcaaagtttgttatctctaaaaaaat-tgtatttttagttaagaaccatatgaaaagcacctaaggaattgtacc 1476710  T
Q  101 taagttttctcctttt 116  Q
    |||||||| |||||||    
T  1476711 taagttttatcctttt 1476726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 113
Target Start/End: Original strand, 38125250 - 38125351
Alignment:
Q  11 aaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttct 110  Q
    |||||||||||||||| |||||||||||||| |       ||||||||||||||||||| | |||| |||| |||||||  ||||||| |||||||||||    
T  38125250 aaatccataattttcttaaagtttgttatatacaaaaaa-tatgtatttttagttaagaaccatacgaaaaacacctaatgaattgtacctaagttttct 38125348  T
Q  111 cct 113  Q
    |||    
T  38125349 cct 38125351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 44611442 - 44611545
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||| |||||| |||||||||||||||||||||||||| |       ||| ||||||||||||| | | ||||||||| |||||||| ||||||| |    
T  44611442 tgatttcttcaaattcataattttctcaaagtttgttatat-caaaaaaatatatatttttagttaaaaaccatacaaaaaacacctaaggaattgtacc 44611540  T
Q  101 taagt 105  Q
    |||||    
T  44611541 taagt 44611545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 4072326 - 4072272
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcct 113  Q
    ||||||||||| | |||| ||||||||||||||||||||| ||||||||||||||    
T  4072326 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctcct 4072272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 35368607 - 35368545
Alignment:
Q  54 gtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctttt 116  Q
    |||||||||||||||| | |||| |||||||| |||| ||||||| |||||||||||||||||    
T  35368607 gtatttttagttaagaaccatacgaaaagcacataaggaattgtacctaagttttctcctttt 35368545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 35368843 - 35368801
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatcc 43  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  35368843 tgattttctcaaatccataattttctcaaagtttgttatatcc 35368801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 44920707 - 44920817
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||| |||||||  |||||||||||||||||| ||||||||       ||||||||||||||||||| | ||| ||||| ||  |||||||||||| |    
T  44920707 tgattttctcaaatttataattttctcaaagtttattatatccaaaaaa-tatgtatttttagttaagaactataaaaaaa-catataagaaattgtacc 44920804  T
Q  101 taagttttctcct 113  Q
    |||||||||||||    
T  44920805 taagttttctcct 44920817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 21969210 - 21969153
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctttt 116  Q
    ||||||||||| | |||| ||||||||||||| ||||||| |||||||||||||||||    
T  21969210 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctttt 21969153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 21991646 - 21991589
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctttt 116  Q
    ||||||||||| | |||| ||||||||||||| ||||||| |||||||||||||||||    
T  21991646 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctttt 21991589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 26976895 - 26976838
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctttt 116  Q
    |||| |||||| | |||| ||||||||||||||||||||| |||||||||||||||||    
T  26976895 tttaattaagaactatacgaaaagcacctaagaaattgtacctaagttttctcctttt 26976838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 46679369 - 46679329
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatatcc 43  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  46679369 atttcctcaaatccataattttctcaaagtttgttaaatcc 46679329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 50099542 - 50099502
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatatcc 43  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  50099542 atttcctcaaattcataattttctcaaagtttgttatatcc 50099502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 36822818 - 36822759
Alignment:
Q  54 gtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcct 113  Q
    |||||||||||||||| | |||| ||||||| ||||| ||||||| ||||||||||||||    
T  36822818 gtatttttagttaagaaccatacgaaaagcagctaaggaattgtacctaagttttctcct 36822759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 50099552 - 50099607
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctt 114  Q
    ||||||||||| | |||| ||||||||||||| ||||||| |||||||||||||||    
T  50099552 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctt 50099607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 8831859 - 8831917
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttttt 117  Q
    ||||||||||| | |||| |||||||||||| |||||||| |||||||||||| |||||    
T  8831859 tttagttaagaaccatacgaaaagcacctaaaaaattgtacctaagttttctctttttt 8831917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 117
Target Start/End: Complemental strand, 10441315 - 10441253
Alignment:
Q  55 tatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttttt 117  Q
    |||||||||||||||   |||| ||||||||||||| |||||||  |||||||||||||||||    
T  10441315 tatttttagttaagaatcataccaaaagcacctaaggaattgtacttaagttttctccttttt 10441253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 111
Target Start/End: Complemental strand, 13724027 - 13723989
Alignment:
Q  73 atacaaaaagcacctaagaaattgtaactaagttttctc 111  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  13724027 atacaaaaagcacctaagaaattgtacctaagttttctc 13723989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 36329241 - 36329187
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcct 113  Q
    |||| |||||| |||||||||||| | ||||||||||||| ||||||||||||||    
T  36329241 tttatttaagaacaatacaaaaagtatctaagaaattgtacctaagttttctcct 36329187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 36657490 - 36657432
Alignment:
Q  55 tatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcct 113  Q
    ||||||||||||||| | |||| ||||||| ||||| ||||||| ||||||||||||||    
T  36657490 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcct 36657432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 42105444 - 42105550
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||| || |||||||||||| |||||||||||||||| ||        | ||||||||||||||||| | ||||||||| |||||| |||||||||      
T  42105444 tgattttcttaaatccataattctctcaaagtttgttatctctaaaaaaat-tgtatttttagttaagaaccatacaaaaaacacctacgaaattgtact 42105542  T
Q  101 taagtttt 108  Q
    ||||||||    
T  42105543 taagtttt 42105550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 45487917 - 45487971
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcct 113  Q
    ||||||||||| | |||| ||||||||||||| ||||||| ||||||||||||||    
T  45487917 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcct 45487971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 22176227 - 22176280
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcc 112  Q
    ||||||||||| | ||||||||||||| |||| ||||||| |||||||||||||    
T  22176227 tttagttaagaaccatacaaaaagcacataaggaattgtacctaagttttctcc 22176280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 26977800 - 26977767
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagttt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  26977800 tgatttcctcaaatccataattttctcaaagttt 26977767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 37536978 - 37536941
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttata 40  Q
    |||||||| |||||||||||||||||||||||||||||    
T  37536978 atttcctctaatccataattttctcaaagtttgttata 37536941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 39850402 - 39850341
Alignment:
Q  54 gtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttt 115  Q
    |||||||||||||||| | |||| |||| |||||||| ||| ||| ||||||||||||||||    
T  39850402 gtatttttagttaagaaccatacgaaaaacacctaaggaatagtacctaagttttctccttt 39850341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 10117629 - 10117685
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttt 115  Q
    ||||||||||| | |||| ||||||||||||| ||||||| |||| |||||||||||    
T  10117629 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctccttt 10117685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 25446368 - 25446427
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctttttta 119  Q
    ||||||||||| | |||| ||||||||||||| |||||| |||||||||||||||| ||||    
T  25446368 tttagttaagaaccatacgaaaagcacctaaggaattgt-actaagttttctccttattta 25446427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 44611434 - 44611380
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctt 114  Q
    ||||||||||| | |||||||||| ||||||| |||||| ||||||||||||||||    
T  44611434 tttagttaagaactatacaaaaagtacctaaggaattgt-actaagttttctcctt 44611380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 3970544 - 3970490
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcct 113  Q
    ||||||||||| | |||| ||||||||||||| ||||| | ||||||||||||||    
T  3970544 tttagttaagaaccatacgaaaagcacctaaggaattgcacctaagttttctcct 3970490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 25561129 - 25561187
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttttt 117  Q
    ||||||||||| | |||| ||||||||||||| |||||||  |||| ||||||||||||    
T  25561129 tttagttaagaactatacgaaaagcacctaaggaattgtacttaagatttctccttttt 25561187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 13078216 - 13078163
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcc 112  Q
    ||||||||||| | |||| ||||||||||||| ||||| | |||||||||||||    
T  13078216 tttagttaagaaccatacgaaaagcacctaaggaattgcacctaagttttctcc 13078163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 26976903 - 26976936
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagttt 34  Q
    |||||| |||||||||||||||||||||||||||    
T  26976903 tgattttctcaaatccataattttctcaaagttt 26976936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 32362922 - 32362861
Alignment:
Q  51 tatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcc 112  Q
    ||||||||||||||||||| | |||| |||| |||||||  |||||||  ||||||||||||    
T  32362922 tatgtatttttagttaagaaccatacgaaaaacacctaaagaattgtagttaagttttctcc 32362861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 43639120 - 43639079
Alignment:
Q  73 atacaaaaagcacctaagaaattgtaactaagttttctcctt 114  Q
    |||| ||||||||||||| |||| ||||||||||||||||||    
T  43639120 atacgaaaagcacctaaggaattataactaagttttctcctt 43639079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 45712956 - 45712903
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcc 112  Q
    |||||||||||  || | |||||||||||||| ||||||| |||||||||||||    
T  45712956 tttagttaagaaaaaaaaaaaaagcacctaaggaattgtacctaagttttctcc 45712903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 46222081 - 46222024
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctttt 116  Q
    ||||||||| | | |||| |||| |||||||||||||||||||| ||||| |||||||    
T  46222081 tttagttaaaaaccatacgaaaaacacctaagaaattgtaactaggttttttcctttt 46222024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 10254687 - 10254739
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctc 111  Q
    ||||||||||| | |||| ||||||||||||| ||||||| |||| |||||||    
T  10254687 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctc 10254739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 2e-29; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 20184299 - 20184413
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||   |||| ||||||| ||||| ||||||| |    
T  20184299 tgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaatcatacgaaaagcagctaaggaattgtacc 20184398  T
Q  101 taagttttctccttt 115  Q
    |||||||||||||||    
T  20184399 taagttttctccttt 20184413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 24836130 - 24836017
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||| ||| | |||| ||||||||||||| ||||||| |    
T  24836130 tgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttnagaaccatacgaaaagcacctaagcaattgtacc 24836032  T
Q  101 taagttttctccttt 115  Q
    |||||||||||||||    
T  24836031 taagttttctccttt 24836017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 30594803 - 30594690
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | || | ||||||||||||| ||||||| |    
T  30594803 tgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaactatgcgaaaagcacctaaggaattgtacc 30594705  T
Q  101 taagttttctccttt 115  Q
    |||||||||||||||    
T  30594704 taagttttctccttt 30594690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 30259127 - 30259239
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||||||||||||| ||| ||||||| |    
T  30259127 tgattttctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacaaaaagcacccaaggaattgtacc 30259225  T
Q  101 taagttttctcctt 114  Q
    ||||||||||||||    
T  30259226 taagttttctcctt 30259239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 31231675 - 31231791
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatc-cnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||  |       ||||||||||||||||||| | |||| ||||||||||||| |||||||     
T  31231675 tgatttcctcaaatccataattttctcaaagtttgttatatgtccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtac 31231774  T
Q  100 ctaagttttctcctttt 116  Q
    |||||||||||||||||    
T  31231775 ctaagttttctcctttt 31231791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 38883331 - 38883220
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| ||||||| ||||| ||||||| |    
T  38883331 tgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacc 38883233  T
Q  101 taagttttctcct 113  Q
    |||||||||||||    
T  38883232 taagttttctcct 38883220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 3953103 - 3953213
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||||||| | |||||||||| ||||||| ||||||| |    
T  3953103 tgatttcctcaaatccataattttcacaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacaaaaagtacctaagtaattgtatc 3953201  T
Q  101 taagttttctcc 112  Q
    ||||||||||||    
T  3953202 taagttttctcc 3953213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 34052389 - 34052279
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||       ||||||||||||||||||| | |||| ||||||||||||| || |||| |    
T  34052389 tgatttcctcaaattcataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaaatgtacc 34052291  T
Q  101 taagttttctcc 112  Q
    ||||||||||||    
T  34052290 taagttttctcc 34052279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 48103478 - 48103365
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||  ||||||||||||||||||||       |||||||||||||||||||   |||| |||| |||||||||||||||| |    
T  48103478 tgatttcctcaaatccataataatctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaatcatacgaaaaacacctaagaaattgtacc 48103380  T
Q  101 taagttttctccttt 115  Q
    |||||||||||||||    
T  48103379 taagttttctccttt 48103365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 10936535 - 10936642
Alignment:
Q  5 ttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaag 104  Q
    ||||||||||| |||||||||||||||||||||||| ||       ||||||||||||||||||| | |||| ||||||||||||| ||||||| |||||    
T  10936535 ttcctcaaatctataattttctcaaagtttgttataaccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaag 10936633  T
Q  105 ttttctcct 113  Q
    |||||||||    
T  10936634 ttttctcct 10936642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 39617902 - 39618012
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||       ||| ||||||||||||||| | |||| ||||||||||||  |||||| ||    
T  39617902 tgatttcctccaatccataattttctcaaagtttgttatatccaaaaaaatatttatttttagttaagaactatacgaaaagcacctaaagaattgt-ac 39618000  T
Q  101 taagttttctcc 112  Q
    ||||||||||||    
T  39618001 taagttttctcc 39618012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 25742494 - 25742603
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaacta 102  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||| | | |||| |||||||| |||||||||| |  ||    
T  25742494 atttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaacaaccatacgaaaagcacttaagaaattgcactta 25742592  T
Q  103 agttttctcct 113  Q
    |||||||||||    
T  25742593 agttttctcct 25742603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 12142303 - 12142192
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||| |||||||||||||||||||||||| |||||||||||       ||| ||||||||||||||| | ||||  ||||||| |||| ||||||| |    
T  12142303 tgattttctcaaatccataattttctcaaagattgttatatccaaaaatatatatatttttagttaagaaccatacccaaagcacgtaaggaattgtacc 12142204  T
Q  101 taagttttctcc 112  Q
    ||||||||||||    
T  12142203 taagttttctcc 12142192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 38528475 - 38528586
Alignment:
Q  5 ttcctcaaatccataattttctcaaagtttgttatatccnnnnnnn-tatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaa 103  Q
    |||||| ||||||||||||||||||||||||||||||          ||||||||||||||||||| | |||| ||||||||||||| ||||||| ||||    
T  38528475 ttcctcgaatccataattttctcaaagtttgttatataaaaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaa 38528574  T
Q  104 gttttctccttt 115  Q
    ||||||||||||    
T  38528575 gttttctccttt 38528586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 35339339 - 35339447
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||       |||||||||||| |||||| | |||| ||||| || |||| ||||||| |    
T  35339339 tgatttcttcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttatttaagaaccatacgaaaagtacataaggaattgtacc 35339437  T
Q  101 taagttttct 110  Q
    ||||||||||    
T  35339438 taagttttct 35339447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 45997569 - 45997680
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||       ||||||||||||||||||| | ||||  ||| |||||||| ||||| | |    
T  45997569 tgatttcctcaaatccataattttctcaaagtttattatatcc-aaaaaatatgtatttttagttaagaaccatacctaaaacacctaaggaattgcacc 45997667  T
Q  101 taagttttctcct 113  Q
    || ||||||||||    
T  45997668 taggttttctcct 45997680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 47237488 - 47237601
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatatccnnnnnnnta--tgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||| ||||||||||||||||||||||||||||||          |  ||||||||||||||||| | |||| |||||||||| |||||||||| |    
T  47237488 atttcctcgaatccataattttctcaaagtttgttatataaaaaaaaaaaaatgtatttttagttaagaaccatacgaaaagcaccttagaaattgtacc 47237587  T
Q  101 taagttttctcctt 114  Q
    ||||||||||||||    
T  47237588 taagttttctcctt 47237601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 9285775 - 9285890
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||||||||  |||||||| ||||||||||||||||||       |||||||||||| |||||| | |||| ||||| ||||||  ||||||| |    
T  9285775 tgatttcctcaaatttataattttatcaaagtttgttatatcc-aaaaaatatgtatttttatttaagaaccatacgaaaagtacctaaagaattgtacc 9285873  T
Q  101 taagttttctccttttt 117  Q
    ||| |||||||||||||    
T  9285874 taaattttctccttttt 9285890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 9289842 - 9289957
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||||||||  |||||||| ||||||||||||||||||       |||||||||||| |||||| | |||| ||||| ||||||  ||||||| |    
T  9289842 tgatttcctcaaatttataattttatcaaagtttgttatatcc-aaaaaatatgtatttttatttaagaaccatacgaaaagtacctaaagaattgtacc 9289940  T
Q  101 taagttttctccttttt 117  Q
    ||| |||||||||||||    
T  9289941 taaattttctccttttt 9289957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 24123816 - 24123858
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatcc 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  24123816 tgatttcctcaaatccataattttctcaaagtttgttatatcc 24123858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 111
Target Start/End: Original strand, 35665691 - 35665786
Alignment:
Q  15 ccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctc 111  Q
    |||| ||||||||||||||||||||||||       ||||||||||||||||| | | |||| ||||||||||||| ||||||| ||||||||||||    
T  35665691 ccatgattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaaaaaccatacgaaaagcacctaaggaattgtacctaagttttctc 35665786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 37093878 - 37093765
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||||||||  |||||||||||||||||||||||||||       ||| |||||||| ||||||   |||| ||||  ||||||||||||||| |    
T  37093878 tgatttcctcaaatttataattttctcaaagtttgttatatcc-aaaaaatatatatttttaattaagaatcatacgaaaaatacctaagaaattgtacc 37093780  T
Q  101 taagttttctccttt 115  Q
    ||| |||||||||||    
T  37093779 taaattttctccttt 37093765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 29277947 - 29277838
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||| ||||||| |||||||||||| |||||| |||||       |  |||||||||||||||| | |||||||||| ||||||  ||||||| |    
T  29277947 tgatttccttaaatccaaaattttctcaaactttgttgtatccaaaacagt--gtatttttagttaagaaccatacaaaaagtacctaaagaattgtacc 29277850  T
Q  101 taagttttctcc 112  Q
    ||||||||||||    
T  29277849 taagttttctcc 29277838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 35665691 - 35665632
Alignment:
Q  54 gtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcct 113  Q
    |||||||||||||||| | |||| ||||||||||||| ||||||| ||||||||||||||    
T  35665691 gtatttttagttaagaaccatacgaaaagcacctaagcaattgtacctaagttttctcct 35665632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 31231667 - 31231614
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcc 112  Q
    ||||||||||| | |||||||||||||||||| ||||||| |||||||||||||    
T  31231667 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcc 31231614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 40358225 - 40358184
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatc 42  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  40358225 tgatttcctcaaattcataattttctcaaagtttgttatatc 40358184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 35339331 - 35339275
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttt 115  Q
    ||||||||||| | |||| ||||||||||||| ||||||| ||||||||||||||||    
T  35339331 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctccttt 35339275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 38883335 - 38883398
Alignment:
Q  55 tatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctttttt 118  Q
    ||||||||||||||| | |||| ||||||| ||||| ||||||| ||||||||||||| |||||    
T  38883335 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctccattttt 38883398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 115
Target Start/End: Complemental strand, 17101693 - 17101651
Alignment:
Q  73 atacaaaaagcacctaagaaattgtaactaagttttctccttt 115  Q
    |||| ||||||||||||||||||||| ||||||||||||||||    
T  17101693 atacgaaaagcacctaagaaattgtacctaagttttctccttt 17101651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 33721879 - 33721825
Alignment:
Q  60 ttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctt 114  Q
    |||||||||| | |||| ||||||||||||| ||||||| |||||||||||||||    
T  33721879 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctt 33721825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 39143775 - 39143813
Alignment:
Q  3 atttcctcaaatccataattttctcaaagtttgttatat 41  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  39143775 atttcctcaaatccataatattctcaaagtttgttatat 39143813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 24836138 - 24836191
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcc 112  Q
    ||||||||||| | |||| ||||||||||||| ||||||| |||||||||||||    
T  24836138 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 24836191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 45997561 - 45997508
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcc 112  Q
    ||||||||||| | ||||||||||||| || ||||||||| |||||||||||||    
T  45997561 tttagttaagaaccatacaaaaagcacatatgaaattgtacctaagttttctcc 45997508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 1403029 - 1402990
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttata 40  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  1403029 tgatttcctcaaatctataattttctcaaaatttgttata 1402990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 10398429 - 10398390
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttata 40  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  10398429 tgatttcctcaaatacataatcttctcaaagtttgttata 10398390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 112
Target Start/End: Original strand, 17101706 - 17101745
Alignment:
Q  73 atacaaaaagcacctaagaaattgtaactaagttttctcc 112  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  17101706 atacgaaaagcacctaagaaattgtacctaagttttctcc 17101745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 25572922 - 25572883
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttata 40  Q
    ||||||| ||||| ||||||||||||||||||||||||||    
T  25572922 tgatttcttcaaaaccataattttctcaaagtttgttata 25572883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 34052397 - 34052452
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctt 114  Q
    ||||| ||||| | |||| ||||||||||||| ||||||| |||||||||||||||    
T  34052397 tttagctaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctt 34052452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 44148757 - 44148722
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgt 36  Q
    ||||||||| ||||||||||||||||||||||||||    
T  44148757 tgatttccttaaatccataattttctcaaagtttgt 44148722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 20184291 - 20184238
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcc 112  Q
    |||||||||||   |||| ||||||||||||| ||||||| |||||||||||||    
T  20184291 tttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttctcc 20184238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 33749754 - 33749713
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatc 42  Q
    ||||||||| |||| ||||||||||||||||||| |||||||    
T  33749754 tgatttccttaaattcataattttctcaaagtttattatatc 33749713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 38528451 - 38528394
Alignment:
Q  51 tatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagtttt 108  Q
    ||||||||||||||||||| | ||||||||||||  |||| ||||||| |||| ||||    
T  38528451 tatgtatttttagttaagaaccatacaaaaagcatttaaggaattgtacctaactttt 38528394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 48103483 - 48103536
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcc 112  Q
    ||||||||||| | |||||||||||||||||  |||||||  ||||||||||||    
T  48103483 tttagttaagaaccatacaaaaagcacctaaagaattgtagataagttttctcc 48103536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 2000 - 2111
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||        || |||||||||||||||| | ||| |||||||||||||| ||||||| |    
T  2000 tgatttcctcaaatccataattttcacaaagtttgttatatctaaaaaaatacgtatttttagttaagaaccatataaaaagcacctaaggaattgtacc 2099  T
Q  101 taagttttctcc 112  Q
    ||||||||||||    
T  2100 taagttttctcc 2111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 1992 - 1934
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttttt 117  Q
    ||||||||||| | |||||||||||||||||  |||| || |||| |||||||||||||    
T  1992 tttagttaagaaccatacaaaaagcacctaaacaattatacctaaattttctccttttt 1934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 51173 - 51054
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||| |||| ||||||||||||||||||||||||||||       ||| ||||||||||||||| | |||| ||||| ||||||| ||||||| |    
T  51173 tgatttccttaaattcataattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaaccatacgaaaaggacctaaggaattgtacc 51075  T
Q  101 taagttttctccttttttaaa 121  Q
    |||||||||||||||| ||||    
T  51074 taagttttctccttttctaaa 51054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 51181 - 51237
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttt 115  Q
    ||||||||||| | |||  ||||| ||||||| ||||||| ||||||||||||||||    
T  51181 tttagttaagaaccatatgaaaagtacctaaggaattgtacctaagttttctccttt 51237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 7196 - 7085
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||| |||||||||||||||   |||| |||| |||||||| ||||||| |    
T  7196 tgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaatatatatatttttagttaagaatcatacgaaaaacacctaaggaattgtacc 7098  T
Q  101 taagttttctcct 113  Q
    ||| |||||||||    
T  7097 taaattttctcct 7085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 14540 - 14440
Alignment:
Q  13 atccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcc 112  Q
    |||||||||||||||||||| ||||||||||       ||||||||||||||||||  | |||  |||| |||||||||||||||| |||||||||||||    
T  14540 atccataattttctcaaagtctgttatatccaaataa-tatgtatttttagttaagtaccataggaaaaacacctaagaaattgtacctaagttttctcc 14442  T
Q  113 tt 114  Q
    ||    
T  14441 tt 14440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 14560 - 14612
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctc 111  Q
    ||||||||||| | |||| ||||||||| ||| ||||||| ||||||||||||    
T  14560 tttagttaagaacgatacgaaaagcacccaaggaattgtacctaagttttctc 14612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 48236 - 48124
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||       |||||||||||| |||| | | |||| |||||||||||| ||||| ||      
T  48236 tgattttctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttaattaaaaaccatacgaaaagcacctaaaaaattatacg 48138  T
Q  101 taagttttctcctt 114  Q
    |||||||| |||||    
T  48137 taagttttgtcctt 48124  T

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Target: scaffold0086; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 48244 - 48296
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctc 111  Q
    ||||||||||| | |||| ||||||| ||||| ||||||| ||||||||||||    
T  48244 tttagttaagaactatacgaaaagcatctaaggaattgtatctaagttttctc 48296  T

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Target: scaffold0653 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 3454 - 3569
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    ||||||||||||||  |||||||| ||||||||||||||||||       |||||||||||| |||||| | |||| ||||| ||||||  ||||||| |    
T  3454 tgatttcctcaaatttataattttatcaaagtttgttatatcc-aaaaaatatgtatttttatttaagaaccatacgaaaagtacctaaagaattgtacc 3552  T
Q  101 taagttttctccttttt 117  Q
    ||| |||||||||||||    
T  3553 taaattttctccttttt 3569  T

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Target: scaffold0137 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 10225 - 10112
Alignment:
Q  1 tgatttcctcaaatccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaac 100  Q
    |||||| |||| |||||||||||||||||||||||||||||||       ||| ||||||||||||||| | ||||  ||| |||||||| |||| || |    
T  10225 tgattttctcacatccataattttctcaaagtttgttatatcc--aaaaatatatatttttagttaagaaccatacgcaaaacacctaaggaattatacc 10128  T
Q  101 taagttttctcctttt 116  Q
    |||||||||| |||||    
T  10127 taagttttctactttt 10112  T

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Target: scaffold0069 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 26464 - 26395
Alignment:
Q  53 tgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctccttttttaaat 122  Q
    ||||||||||||||| | | |||| ||||||||||||| ||||||| ||||||||||||||| |||||||    
T  26464 tgtatttttagttaataaccatacgaaaagcacctaaggaattgtacctaagttttctccttatttaaat 26395  T

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Target: scaffold0595 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 113
Target Start/End: Complemental strand, 5762 - 5700
Alignment:
Q  51 tatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcct 113  Q
    ||||||||||||||||||| | |||| ||||||||||||  ||||||| || |||||||||||    
T  5762 tatgtatttttagttaagaaccatacgaaaagcacctaaagaattgtaccttagttttctcct 5700  T

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Target: scaffold0595; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 5823 - 5880
Alignment:
Q  59 tttagttaagaccaatacaaaaagcacctaag--aaattgtaactaagttttctcctt 114  Q
    ||||||||||| | |||| |||||||||||||  |||||||| |||||||||||||||    
T  5823 tttagttaagaaccatacgaaaagcacctaaggaaaattgtacctaagttttctcctt 5880  T

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Target: scaffold0006 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 115
Target Start/End: Original strand, 72346 - 72444
Alignment:
Q  15 ccataattttctcaaagtttgttatatccnnnnnnntatgtatttttagttaagaccaatacaaaaagcacctaagaaattgtaactaagttttctcctt 114  Q
    |||||||||||||| ||||||||||||||       ||||||||||||||||| | | |||| |||||||| |||| |||||  ||||||||||||||||    
T  72346 ccataattttctcagagtttgttatatccaaaaaa-tatgtatttttagttaaaaaccatacgaaaagcacttaaggaattg-cactaagttttctcctt 72443  T

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