View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11210_high_4 (Length: 307)
Name: NF11210_high_4
Description: NF11210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11210_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 163327 - 163034
Alignment:
| Q |
1 |
ttctctcgattagttcatcttcgcgatcgatttaggtatgtttattgaacctttcttcttcgcgattatttcttggttattcgtatgaaccctaatcgtt |
100 |
Q |
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| T |
163327 |
ttctctcgattagttcatcttcgcgatcgatttaggtatgtttattgaacctttcttcttcgcgattatttcttggttattcgtatgaaccctaatcgtt |
163228 |
T |
|
| Q |
101 |
ttgttaattgaattatcctgcttcgtcatttcttaatttgatttttctattttgtgattgtgctacttgtagctgggtgggtgggtgtatgcgttaaaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
163227 |
ttgttaattgaattatcctgcttcgtcatttcttaatttgatttttctattttgtgattgtgctacttgtagctgggtgggtgggtgtatgcgttaaaat |
163128 |
T |
|
| Q |
201 |
gattcatttgtatagcttcttaccgccgcaatataatgaatactgtaatagtagtaacgaaagcaagtttagtttgttaaaagtttgttcctct |
294 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
163127 |
gattcatttgtatagcttcttaccgccggaatataatgaatactgtaatagcagtaacgaaagcaagtttagtttgttaaaagtttgttcctct |
163034 |
T |
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