View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11211_low_9 (Length: 341)
Name: NF11211_low_9
Description: NF11211
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11211_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 310; Significance: 1e-174; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 1 - 330
Target Start/End: Original strand, 32273604 - 32273933
Alignment:
| Q |
1 |
cgtatccaaaaacaaaagcttgttggtgaatctgttttccggcgcagaggtcgtagagggaagagcaggatttgatagtgcaagggaaagtggaacggtt |
100 |
Q |
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| T |
32273604 |
cgtatccaaaaacaaaagcttgttggtgaatctgttttccggcgcagaggtcgtagagggaagagcaggatttgatagtgcaagggaaagtggaacggtt |
32273703 |
T |
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| Q |
101 |
tggatgaagagagagttttcgcattgaagagaaagcgtaaagagcttgtaaagaaacgccgctgcgagcgaaatcagcgatgattgagttccaactatat |
200 |
Q |
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| T |
32273704 |
tggatgaagagagagttttcgcattgaagagaaagcgtaaagagcttgtaaagaatcgccgctgcgagcgaaatcagcgatgattgagttccaactatat |
32273803 |
T |
|
| Q |
201 |
acgcttgttttgtcgacatatttgccgaacatgcttctaaggctcgcggttttggtccattctgtatttttcgttgttgttgttgagtgcatgcgtatgc |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
32273804 |
acgcttgttttgtcgacatatttgccgaacatgcttcttaggttcgcggttttggtccattctgtagttttcgttgttgttgttgagtgcatgcgtatgc |
32273903 |
T |
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| Q |
301 |
atttgttaattgttgtcgatgatgataatg |
330 |
Q |
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|||||||||||||||| ||||||||||||| |
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| T |
32273904 |
atttgttaattgttgtagatgatgataatg |
32273933 |
T |
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