View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11213_high_2 (Length: 206)
Name: NF11213_high_2
Description: NF11213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11213_high_2 |
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Alignment Details
Target: chr3 (Bit Score: 176; Significance: 5e-95; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 12 - 191
Target Start/End: Complemental strand, 31811283 - 31811104
Alignment:
| Q |
12 |
gagaagaaacaatgttgttgaatggataacttgcttgaacatggttcctattttggttcagctgaagcctactcatagattgaaattggctaggagttga |
111 |
Q |
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| T |
31811283 |
gagatgaaacaatgttgttgaatggataacttgcttgaacatggttcctattttggttcagctgaagcctactcatagattgaaattggctaggagttga |
31811184 |
T |
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| Q |
112 |
aggttgcattgaaacaccatgtaacaggtccatttcttgatacaaatcccttgcactcaaagcatttttcagctgcaatg |
191 |
Q |
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| T |
31811183 |
aggttgcattgaaacaccatgtaacaggtccatttcttgatacaaatcccttgcactcaaagcatttttcagctgcaatg |
31811104 |
T |
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