View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11217_high_34 (Length: 222)

Name: NF11217_high_34
Description: NF11217
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11217_high_34
NF11217_high_34
[»] scaffold0499 (1 HSPs)
scaffold0499 (1-183)||(1979-2161)
[»] chr1 (47 HSPs)
chr1 (1-183)||(20845589-20845771)
chr1 (1-183)||(20054464-20054646)
chr1 (1-183)||(20054920-20055102)
chr1 (1-183)||(20055376-20055558)
chr1 (1-183)||(20055832-20056014)
chr1 (1-183)||(20056288-20056470)
chr1 (1-183)||(20057191-20057373)
chr1 (1-183)||(20057647-20057829)
chr1 (1-183)||(20054008-20054190)
chr1 (1-183)||(20056744-20056926)
chr1 (1-183)||(38340942-38341124)
chr1 (1-172)||(52250242-52250413)
chr1 (1-178)||(35760847-35761024)
chr1 (15-183)||(46693663-46693831)
chr1 (9-183)||(50002635-50002809)
chr1 (20-183)||(20060268-20060431)
chr1 (1-176)||(43057458-43057633)
chr1 (1-183)||(35759536-35759718)
chr1 (9-155)||(16451889-16452035)
chr1 (9-155)||(16461042-16461188)
chr1 (1-183)||(43056993-43057175)
chr1 (1-183)||(51372802-51372984)
chr1 (9-183)||(50003003-50003177)
chr1 (9-142)||(50002254-50002387)
chr1 (1-166)||(7548127-7548292)
chr1 (1-108)||(2328351-2328458)
chr1 (1-108)||(20061194-20061301)
chr1 (1-176)||(12883560-12883735)
chr1 (16-143)||(23180781-23180908)
chr1 (1-164)||(30872897-30873060)
chr1 (1-130)||(12728027-12728157)
chr1 (1-164)||(16907270-16907433)
chr1 (1-150)||(2634960-2635109)
chr1 (1-143)||(31822631-31822773)
chr1 (66-172)||(52250644-52250750)
chr1 (66-172)||(52250981-52251087)
chr1 (9-129)||(10820636-10820758)
chr1 (3-130)||(2634504-2634631)
chr1 (14-143)||(16440547-16440676)
chr1 (89-169)||(35009938-35010018)
chr1 (73-151)||(8278065-8278143)
chr1 (3-165)||(16410669-16410831)
chr1 (47-151)||(7229903-7230007)
chr1 (34-98)||(31823097-31823161)
chr1 (1-80)||(2739558-2739637)
chr1 (1-80)||(842964-843043)
chr1 (3-49)||(42317663-42317709)
[»] scaffold0322 (1 HSPs)
scaffold0322 (1-173)||(19002-19174)
[»] chr6 (50 HSPs)
chr6 (1-173)||(17027469-17027641)
chr6 (1-183)||(20850357-20850539)
chr6 (1-183)||(13492825-13493007)
chr6 (1-172)||(20896627-20896798)
chr6 (9-183)||(7911922-7912096)
chr6 (1-183)||(13191441-13191623)
chr6 (1-167)||(16520004-16520170)
chr6 (1-172)||(21312007-21312178)
chr6 (1-183)||(9352098-9352280)
chr6 (1-183)||(20126110-20126292)
chr6 (26-183)||(13492393-13492550)
chr6 (1-126)||(6330897-6331022)
chr6 (1-173)||(7912346-7912518)
chr6 (1-165)||(23776477-23776640)
chr6 (1-167)||(11062321-11062487)
chr6 (1-183)||(23986245-23986427)
chr6 (9-143)||(2681184-2681318)
chr6 (1-173)||(17731047-17731223)
chr6 (1-183)||(2890767-2890949)
chr6 (9-151)||(15929626-15929768)
chr6 (1-183)||(2720491-2720674)
chr6 (3-130)||(17851412-17851539)
chr6 (1-105)||(27334197-27334301)
chr6 (1-105)||(27394937-27395041)
chr6 (1-151)||(9440269-9440419)
chr6 (3-172)||(21311553-21311722)
chr6 (1-153)||(14771677-14771829)
chr6 (1-108)||(3652522-3652629)
chr6 (3-183)||(33774930-33775112)
chr6 (3-165)||(17850956-17851118)
chr6 (66-172)||(28780211-28780317)
chr6 (1-108)||(1991589-1991696)
chr6 (1-99)||(31821704-31821802)
chr6 (14-167)||(9440801-9440954)
chr6 (1-137)||(32292921-32293055)
chr6 (1-104)||(15929235-15929338)
chr6 (1-130)||(20732614-20732743)
chr6 (1-86)||(20735731-20735816)
chr6 (5-165)||(28065781-28065944)
chr6 (2-143)||(17205376-17205516)
chr6 (3-145)||(30729805-30729947)
chr6 (15-108)||(28583013-28583106)
chr6 (1-54)||(9440485-9440538)
chr6 (4-138)||(3885063-3885194)
chr6 (1-62)||(10964340-10964401)
chr6 (10-143)||(12194374-12194506)
chr6 (100-183)||(3652658-3652741)
chr6 (114-178)||(3653051-3653115)
chr6 (4-50)||(9441089-9441135)
chr6 (1-37)||(3653015-3653051)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-183)||(1256-1438)
[»] chr7 (53 HSPs)
chr7 (1-183)||(2941685-2941867)
chr7 (1-183)||(13125064-13125246)
chr7 (1-183)||(34405519-34405701)
chr7 (1-173)||(2193292-2193464)
chr7 (9-183)||(2465777-2465951)
chr7 (9-173)||(2189188-2189352)
chr7 (1-172)||(36422288-36422458)
chr7 (1-183)||(9124995-9125177)
chr7 (1-177)||(2465960-2466136)
chr7 (1-183)||(28495890-28496072)
chr7 (1-183)||(42515580-42515762)
chr7 (1-183)||(6719003-6719184)
chr7 (1-171)||(18833322-18833492)
chr7 (1-155)||(28495564-28495718)
chr7 (1-183)||(42515128-42515310)
chr7 (1-183)||(679853-680034)
chr7 (1-172)||(35474060-35474231)
chr7 (1-165)||(46425777-46425940)
chr7 (49-183)||(13122433-13122567)
chr7 (1-126)||(6747583-6747708)
chr7 (14-173)||(22529173-22529332)
chr7 (3-130)||(25182399-25182526)
chr7 (1-155)||(2611608-2611762)
chr7 (2-143)||(5406556-5406697)
chr7 (1-105)||(11517395-11517498)
chr7 (4-173)||(29038958-29039127)
chr7 (1-126)||(29357441-29357566)
chr7 (61-172)||(7646417-7646528)
chr7 (16-162)||(35527070-35527216)
chr7 (5-101)||(31743834-31743930)
chr7 (3-118)||(26421753-26421868)
chr7 (9-121)||(31406574-31406686)
chr7 (66-183)||(7646516-7646633)
chr7 (1-150)||(11372487-11372636)
chr7 (15-129)||(26421287-26421401)
chr7 (3-108)||(36015414-36015519)
chr7 (1-86)||(43233449-43233534)
chr7 (5-129)||(9623248-9623371)
chr7 (1-149)||(20966087-20966235)
chr7 (12-165)||(1628763-1628913)
chr7 (14-103)||(16192368-16192457)
chr7 (1-64)||(26957604-26957667)
chr7 (79-178)||(43776223-43776322)
chr7 (1-55)||(13124757-13124811)
chr7 (1-126)||(37672196-37672321)
chr7 (4-64)||(6585647-6585707)
chr7 (1-57)||(16811900-16811956)
chr7 (3-62)||(2490077-2490136)
chr7 (1-127)||(33316764-33316885)
chr7 (1-126)||(11372935-11373060)
chr7 (82-172)||(3305287-3305377)
chr7 (3-49)||(3305374-3305420)
chr7 (37-118)||(7461344-7461424)
[»] chr4 (69 HSPs)
chr4 (1-183)||(12691921-12692103)
chr4 (1-173)||(44471257-44471429)
chr4 (9-172)||(49998680-49998843)
chr4 (1-172)||(7678555-7678726)
chr4 (9-173)||(23350215-23350379)
chr4 (3-183)||(44470797-44470976)
chr4 (1-171)||(35871664-35871833)
chr4 (9-183)||(50398460-50398634)
chr4 (5-173)||(4127821-4127989)
chr4 (1-172)||(24628910-24629084)
chr4 (1-155)||(24629383-24629537)
chr4 (31-171)||(50814759-50814899)
chr4 (1-163)||(1464183-1464345)
chr4 (1-155)||(50398943-50399097)
chr4 (1-155)||(51331231-51331385)
chr4 (14-183)||(23943164-23943333)
chr4 (1-164)||(1645690-1645853)
chr4 (1-165)||(23942729-23942893)
chr4 (3-183)||(9423780-9423960)
chr4 (3-183)||(31817774-31817954)
chr4 (1-183)||(3169242-3169424)
chr4 (1-166)||(21220271-21220435)
chr4 (3-178)||(21067320-21067495)
chr4 (1-108)||(4127434-4127541)
chr4 (1-140)||(8467773-8467904)
chr4 (1-151)||(13266122-13266272)
chr4 (1-173)||(14572086-14572254)
chr4 (1-155)||(29628618-29628771)
chr4 (4-130)||(53996090-53996216)
chr4 (14-151)||(17628560-17628697)
chr4 (1-171)||(21067770-21067937)
chr4 (1-124)||(14571702-14571825)
chr4 (1-151)||(27026539-27026688)
chr4 (5-122)||(27029317-27029434)
chr4 (3-126)||(14351833-14351956)
chr4 (3-149)||(33764898-33765044)
chr4 (1-143)||(15306053-15306201)
chr4 (1-142)||(43928927-43929067)
chr4 (3-127)||(31817376-31817500)
chr4 (4-143)||(41869957-41870096)
chr4 (1-143)||(27578419-27578561)
chr4 (1-151)||(4185751-4185901)
chr4 (25-137)||(20306132-20306241)
chr4 (1-183)||(27578831-27579013)
chr4 (5-129)||(13613874-13613997)
chr4 (3-166)||(17029368-17029531)
chr4 (1-148)||(23976175-23976323)
chr4 (26-148)||(23091468-23091590)
chr4 (3-108)||(44831035-44831140)
chr4 (3-108)||(4186205-4186310)
chr4 (3-143)||(17028912-17029052)
chr4 (3-86)||(53391925-53392008)
chr4 (1-151)||(24271505-24271654)
chr4 (1-54)||(53854858-53854911)
chr4 (3-75)||(42838661-42838733)
chr4 (1-143)||(17629004-17629145)
chr4 (19-141)||(34554483-34554605)
chr4 (40-87)||(39902471-39902518)
chr4 (81-151)||(11828439-11828509)
chr4 (3-65)||(17506423-17506485)
chr4 (114-206)||(50399272-50399361)
chr4 (95-151)||(27578240-27578296)
chr4 (4-80)||(45682242-45682318)
chr4 (1-52)||(2499647-2499698)
chr4 (1-76)||(52048695-52048770)
chr4 (94-136)||(14571657-14571699)
chr4 (124-173)||(4127350-4127399)
chr4 (1-79)||(26200311-26200391)
chr4 (9-45)||(33987103-33987139)
[»] chr2 (41 HSPs)
chr2 (1-183)||(33771037-33771219)
chr2 (1-172)||(25337936-25338107)
chr2 (1-183)||(30966270-30966452)
chr2 (1-171)||(41754325-41754495)
chr2 (3-183)||(30966728-30966908)
chr2 (3-183)||(29259548-29259728)
chr2 (1-183)||(8256562-8256744)
chr2 (3-183)||(24818364-24818543)
chr2 (1-183)||(16379429-16379611)
chr2 (15-183)||(5399745-5399913)
chr2 (3-183)||(16378975-16379155)
chr2 (1-153)||(11388224-11388375)
chr2 (1-153)||(29804718-29804870)
chr2 (1-184)||(1707077-1707260)
chr2 (1-183)||(33174994-33175174)
chr2 (1-153)||(11394571-11394721)
chr2 (1-183)||(1912561-1912742)
chr2 (3-183)||(15619936-15620116)
chr2 (18-130)||(33174556-33174668)
chr2 (1-155)||(38898868-38899022)
chr2 (12-151)||(30963223-30963362)
chr2 (1-151)||(13191010-13191160)
chr2 (1-106)||(18098883-18098988)
chr2 (3-172)||(27882865-27883034)
chr2 (2-130)||(25434037-25434165)
chr2 (1-151)||(83053-83203)
chr2 (3-112)||(20502061-20502169)
chr2 (12-183)||(15639781-15639952)
chr2 (17-151)||(8073944-8074078)
chr2 (1-151)||(30963680-30963830)
chr2 (1-86)||(1953191-1953276)
chr2 (22-151)||(30961843-30961972)
chr2 (71-183)||(32377644-32377756)
chr2 (1-75)||(18447954-18448028)
chr2 (1-143)||(16542021-16542164)
chr2 (16-80)||(36924453-36924519)
chr2 (97-183)||(32377835-32377921)
chr2 (16-64)||(8181398-8181446)
chr2 (30-126)||(37552632-37552726)
chr2 (3-87)||(9909130-9909214)
chr2 (22-76)||(26864851-26864905)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-183)||(105756-105938)
[»] chr3 (48 HSPs)
chr3 (1-183)||(28561782-28561963)
chr3 (1-172)||(11179973-11180144)
chr3 (8-172)||(13150493-13150657)
chr3 (1-172)||(32227160-32227331)
chr3 (1-172)||(32227536-32227707)
chr3 (1-163)||(31284224-31284386)
chr3 (3-172)||(50347784-50347953)
chr3 (1-184)||(14813985-14814168)
chr3 (9-183)||(16811425-16811599)
chr3 (3-183)||(27187258-27187438)
chr3 (1-172)||(39653200-39653371)
chr3 (1-172)||(13150038-13150209)
chr3 (1-183)||(8067316-8067498)
chr3 (1-173)||(20885055-20885227)
chr3 (1-173)||(32386672-32386844)
chr3 (1-183)||(25230633-25230815)
chr3 (1-183)||(25238220-25238402)
chr3 (4-161)||(29224363-29224520)
chr3 (1-177)||(14820190-14820366)
chr3 (4-183)||(16810964-16811143)
chr3 (1-183)||(30529723-30529904)
chr3 (1-165)||(41472337-41472500)
chr3 (5-183)||(25238612-25238790)
chr3 (1-130)||(7493917-7494046)
chr3 (1-173)||(25230186-25230358)
chr3 (1-173)||(25237773-25237945)
chr3 (1-183)||(25248147-25248329)
chr3 (1-130)||(39640973-39641102)
chr3 (17-173)||(4067298-4067454)
chr3 (1-126)||(7477227-7477352)
chr3 (1-130)||(25802529-25802658)
chr3 (1-108)||(32796938-32797045)
chr3 (1-118)||(25239070-25239187)
chr3 (20-183)||(37045090-37045250)
chr3 (1-129)||(25802986-25803114)
chr3 (1-151)||(2911131-2911281)
chr3 (1-184)||(41474033-41474216)
chr3 (33-151)||(3899868-3899986)
chr3 (54-166)||(53150757-53150869)
chr3 (1-87)||(31103984-31104070)
chr3 (12-104)||(26309996-26310088)
chr3 (25-151)||(15392570-15392696)
chr3 (25-151)||(15405606-15405732)
chr3 (25-151)||(15411015-15411141)
chr3 (25-151)||(15417431-15417557)
chr3 (33-81)||(3890046-3890094)
chr3 (23-52)||(25238816-25238845)
chr3 (12-72)||(47518358-47518418)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-183)||(107391-107573)
[»] chr8 (47 HSPs)
chr8 (1-183)||(10844543-10844725)
chr8 (1-183)||(22548923-22549105)
chr8 (1-172)||(12827193-12827364)
chr8 (1-183)||(22026415-22026597)
chr8 (1-183)||(22548477-22548659)
chr8 (1-183)||(25147572-25147754)
chr8 (3-176)||(34308414-34308587)
chr8 (1-183)||(17103117-17103300)
chr8 (1-172)||(27925935-27926105)
chr8 (1-172)||(41659044-41659215)
chr8 (1-183)||(12100727-12100908)
chr8 (3-176)||(34308870-34309047)
chr8 (1-150)||(25144808-25144957)
chr8 (1-165)||(25148003-25148167)
chr8 (1-153)||(27022296-27022448)
chr8 (1-183)||(2044094-2044276)
chr8 (1-125)||(10844919-10845043)
chr8 (1-183)||(21316038-21316219)
chr8 (3-173)||(32292435-32292605)
chr8 (1-152)||(33852217-33852368)
chr8 (1-183)||(8080270-8080452)
chr8 (1-130)||(6464891-6465020)
chr8 (43-183)||(31283580-31283719)
chr8 (1-153)||(41913006-41913158)
chr8 (1-87)||(28375078-28375164)
chr8 (1-142)||(3744674-3744815)
chr8 (1-86)||(27021904-27021989)
chr8 (3-151)||(27819206-27819354)
chr8 (5-104)||(15819022-15819121)
chr8 (1-130)||(28453374-28453503)
chr8 (9-164)||(3745145-3745300)
chr8 (1-108)||(22840532-22840639)
chr8 (1-151)||(1297043-1297193)
chr8 (14-139)||(15567528-15567653)
chr8 (1-75)||(22705208-22705282)
chr8 (3-183)||(30527410-30527589)
chr8 (1-103)||(30334916-30335018)
chr8 (10-151)||(6466756-6466892)
chr8 (16-148)||(15567972-15568100)
chr8 (1-62)||(29971450-29971511)
chr8 (4-76)||(17429539-17429611)
chr8 (61-143)||(10729654-10729736)
chr8 (3-72)||(36968434-36968503)
chr8 (116-183)||(32292092-32292159)
chr8 (37-138)||(6466329-6466429)
chr8 (22-59)||(3508790-3508827)
chr8 (66-130)||(10729724-10729788)
[»] chr5 (44 HSPs)
chr5 (1-173)||(1821942-1822114)
chr5 (4-183)||(2474444-2474623)
chr5 (9-183)||(17445383-17445557)
chr5 (1-183)||(21886074-21886256)
chr5 (3-171)||(189106-189274)
chr5 (9-183)||(34371656-34371830)
chr5 (5-152)||(2473999-2474146)
chr5 (1-155)||(2193852-2194006)
chr5 (1-183)||(8641963-8642144)
chr5 (1-183)||(22557005-22557187)
chr5 (9-183)||(42788574-42788748)
chr5 (3-183)||(3886529-3886709)
chr5 (3-183)||(34372106-34372286)
chr5 (1-183)||(3886985-3887167)
chr5 (1-183)||(22556572-22556754)
chr5 (1-155)||(34867826-34867980)
chr5 (1-173)||(10927341-10927513)
chr5 (1-173)||(10926884-10927056)
chr5 (1-166)||(27646780-27646945)
chr5 (5-164)||(8391269-8391427)
chr5 (1-183)||(15512940-15513123)
chr5 (10-151)||(18750156-18750297)
chr5 (9-183)||(20039403-20039576)
chr5 (1-173)||(29680045-29680210)
chr5 (1-130)||(39146975-39147104)
chr5 (1-164)||(18304467-18304630)
chr5 (18-141)||(30719775-30719898)
chr5 (18-164)||(30684503-30684649)
chr5 (19-143)||(20858509-20858633)
chr5 (15-151)||(24182206-24182341)
chr5 (3-130)||(5066872-5066999)
chr5 (1-87)||(16370732-16370818)
chr5 (14-139)||(42429194-42429319)
chr5 (45-173)||(11757219-11757347)
chr5 (4-103)||(2058664-2058763)
chr5 (1-149)||(4657956-4658102)
chr5 (1-79)||(11160713-11160791)
chr5 (1-137)||(32574632-32574767)
chr5 (14-108)||(4673474-4673568)
chr5 (1-80)||(43356651-43356729)
chr5 (77-163)||(4102908-4102994)
chr5 (1-45)||(22975076-22975120)
chr5 (42-75)||(39801498-39801531)
chr5 (64-148)||(5785944-5786028)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-172)||(2778-2949)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-183)||(2138-2320)
[»] scaffold0018 (1 HSPs)
scaffold0018 (3-183)||(10338-10517)
[»] scaffold0333 (2 HSPs)
scaffold0333 (1-172)||(4597-4767)
scaffold0333 (1-172)||(5052-5227)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-172)||(154793-154964)
[»] scaffold0022 (4 HSPs)
scaffold0022 (1-183)||(162606-162788)
scaffold0022 (1-151)||(69775-69925)
scaffold0022 (61-183)||(163167-163289)
scaffold0022 (66-173)||(163072-163179)
[»] scaffold0047 (2 HSPs)
scaffold0047 (1-153)||(17556-17708)
scaffold0047 (1-152)||(18094-18244)
[»] scaffold0389 (1 HSPs)
scaffold0389 (51-164)||(13480-13593)
[»] scaffold0277 (1 HSPs)
scaffold0277 (66-172)||(14641-14747)
[»] scaffold0005 (3 HSPs)
scaffold0005 (1-173)||(245122-245290)
scaffold0005 (1-124)||(245551-245674)
scaffold0005 (94-136)||(245677-245719)
[»] scaffold0557 (1 HSPs)
scaffold0557 (14-130)||(2154-2270)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-77)||(23709-23785)
[»] scaffold0664 (1 HSPs)
scaffold0664 (1-100)||(3993-4092)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-80)||(142305-142384)
[»] scaffold0036 (2 HSPs)
scaffold0036 (1-148)||(26106-26251)
scaffold0036 (1-80)||(16072-16151)
[»] scaffold0391 (1 HSPs)
scaffold0391 (9-130)||(14785-14906)
[»] scaffold0217 (1 HSPs)
scaffold0217 (76-176)||(421-521)
[»] scaffold1519 (1 HSPs)
scaffold1519 (114-176)||(1636-1698)
[»] scaffold0101 (1 HSPs)
scaffold0101 (4-76)||(45425-45497)
[»] scaffold0071 (1 HSPs)
scaffold0071 (25-151)||(44681-44807)
[»] scaffold0137 (1 HSPs)
scaffold0137 (94-151)||(7071-7128)


Alignment Details
Target: scaffold0499 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 2161 - 1979
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  2161 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 2062  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||| |||| ||||    
T  2061 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtga 1979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 143; Significance: 3e-75; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 20845771 - 20845589
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  20845771 aggtatgagactgcatggttgaaggaaggcttataagaattgtttgttactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 20845672  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||| ||||    
T  20845671 actccacagttaagcgtgcttgacttggagaaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtga 20845589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 20054646 - 20054464
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  20054646 aggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 20054547  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||| |||| ||||    
T  20054546 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtga 20054464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 20055102 - 20054920
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  20055102 aggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 20055003  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||| |||| ||||    
T  20055002 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtga 20054920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 20055558 - 20055376
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  20055558 aggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 20055459  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||| |||| ||||    
T  20055458 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtga 20055376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 20056014 - 20055832
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  20056014 aggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 20055915  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||| |||| ||||    
T  20055914 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtga 20055832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 20056470 - 20056288
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  20056470 aggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 20056371  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||| |||| ||||    
T  20056370 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtga 20056288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 20057373 - 20057191
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  20057373 aggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 20057274  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||| |||| ||||    
T  20057273 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtga 20057191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 20057829 - 20057647
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  20057829 aggtatgggactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 20057730  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||| |||| ||||    
T  20057729 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtga 20057647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 20054190 - 20054008
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  20054190 aggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 20054091  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| |||||||||||| |||| |||||||||||| ||||||||||| ||||||| | ||||||| |||| ||||    
T  20054090 actccacagttaagcgtgcttgactaggagcaattttgggatgggtgacctaccgggaagttttctggtaagcgtgcgagtga 20054008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 20056926 - 20056744
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  20056926 aggtatgggactgcagggttgaaggaaggcttatgagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 20056827  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||| ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||| |||| ||||    
T  20056826 actccacagttaagcgtgtttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtga 20056744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 38340942 - 38341124
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||| |||||||    
T  38340942 aggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcatttcggtagctcattccataaga 38341041  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    ||| |||| ||| ||||||||||||||||| |||||||||||| ||||||||| | ||||||||||||||||| |||| ||||    
T  38341042 acttcacagttaagcgtgcttgacttggagcaattttgggatgggtgacctactgggaagtttcccggtaagcgtgcgagtga 38341124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 52250242 - 52250413
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  52250242 aggtatgggactacatggtcgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 52250341  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaag 172  Q
    |||||||| ||| |||||||||||||| || |||||||| ||| ||||||||||| ||||||||||||||||    
T  52250342 actccacagttaagcgtgcttgacttgaagcaattttggaatgggtgacctaccgggaagtttcccggtaag 52250413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 35761024 - 35760847
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||| ||| |||    
T  35761024 aggtatgagactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcattccatgaga 35760925  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcg 178  Q
    |||||  | ||| ||||||||||||||||| |||||||||||| || ||||| || ||||||||||||||||| ||||    
T  35760924 actccgtagttaagcgtgcttgacttggagcaattttgggatgggtaacctatcgggaagtttcccggtaagcgtgcg 35760847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 15 - 183
Target Start/End: Complemental strand, 46693831 - 46693663
Alignment:
Q  15 atggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacg 114  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||| ||||||||| ||| |    
T  46693831 atggttgaaggaaggcttataaaaattgtttggtactacctatatcaacaagatgcatcttcttttcggtatctcatttcataataactccacagttaag 46693732  T
Q  115 cgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||||||||||| |||||||||||| |||||||||||  ||||||||||||| || |||| ||||    
T  46693731 cgtgcttgacttggagcaattttgggatgggtgacctaccggaaagtttcccggtatgcgtgcgagtga 46693663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 50002809 - 50002635
Alignment:
Q  9 gactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccaca 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||   ||||||||||| |    
T  50002809 gactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattctttaagaactccata 50002710  T
Q  109 attacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
     ||| ||||| ||||||||||| ||||||||||||  |||||||||| |||||| |||||||||| |||| ||||    
T  50002709 gttaagcgtgtttgacttggagcaattttgggatggatgacctaccgggaagttccccggtaagcgtgcgagtga 50002635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 20060431 - 20060268
Alignment:
Q  20 tgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgc 119  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||| ||| | ||||    
T  20060431 tgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagtgtgc 20060332  T
Q  120 ttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    ||||||||||  |||||||||||| ||||||||||| ||||||| ||||||||| |||| ||||    
T  20060331 ttgacttggatcaattttgggatgggtgacctaccgggaagttttccggtaagcgtgcgagtga 20060268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 43057633 - 43057458
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||| |||||||    
T  43057633 aggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagcccattccataaga 43057534  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatg 176  Q
    |||||||| ||| ||||| |||||||||||   | || ||||  ||||||||| | ||||||||||||||||||||    
T  43057533 actccacagttaagcgtgattgacttggagtggtctttggatcggtgacctactgggaagtttcccggtaagcatg 43057458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 35759718 - 35759536
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  35759718 aggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 35759619  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    ||| || | |||  ||||||||||||||||  ||||||||||  ||||||||||| |||||||  |||||||| |||| ||||    
T  35759618 acttcatagttaaacgtgcttgacttggagctattttgggattggtgacctaccgggaagtttttcggtaagcgtgcgagtga 35759536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 155
Target Start/End: Complemental strand, 16452035 - 16451889
Alignment:
Q  9 gactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccaca 108  Q
    |||| |||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||  |||| |||||||||||||||    
T  16452035 gactacatggttgaaggaaagcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagttcattccataagaactccaca 16451936  T
Q  109 attacgcgtgcttgacttggagaaattttgggatgtgtgacctaccg 155  Q
     ||| ||||||||||||||||| |||||||||||| |||||||||||    
T  16451935 gttaagcgtgcttgacttggagcaattttgggatgggtgacctaccg 16451889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 155
Target Start/End: Complemental strand, 16461188 - 16461042
Alignment:
Q  9 gactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccaca 108  Q
    |||| |||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||  |||| |||||||||||||||    
T  16461188 gactacatggttgaaggaaagcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagttcattccataagaactccaca 16461089  T
Q  109 attacgcgtgcttgacttggagaaattttgggatgtgtgacctaccg 155  Q
     ||| ||||||||||||||||| |||||||||||| |||||||||||    
T  16461088 gttaagcgtgcttgacttggagcaattttgggatgggtgacctaccg 16461042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 43057175 - 43056993
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  43057175 aggtatgtgactacatggttgaaggaaggcttagaagaattgtttgatactacctatatcaacaagatgcatcttcttttcggtagcccattccataaga 43057076  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||| ||||||| |||   | || ||||| ||||||||| | |||||||||||||||||||||| ||||    
T  43057075 actccacagttaagcgtgattgacttagagtggtctttggatgggtgacctactgggaagtttcccggtaagcatgcgagtga 43056993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 51372984 - 51372802
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||| ||||||||||| |||| |||||||    
T  51372984 aggtatgtgactgtatggttgaaggaaggcttataagaattgtttagtactacctatatcgacaagatgcatcttattttcggtagctcattccataaga 51372885  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||| ||| |||||||||||| |||||||| |  |||||||  |||||||| |||| ||||    
T  51372884 actccacagttaagcgtgcttgactttgagcaattttgggatgggtgacctatcaggaagtttttcggtaagcgtgcgagtga 51372802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 50003177 - 50003003
Alignment:
Q  9 gactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccaca 108  Q
    |||||||||||| |||| || ||||||| ||||||| ||||||||||||||||||| |||||||||||||||| ||||| |||| || ||||||| ||||    
T  50003177 gactgcatggttaaagggagacttataataattgttgggtactacctatatcaacaagatgcatcttcttttcagtagctcattccaaaagaacttcaca 50003078  T
Q  109 attacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
     ||| ||||||||||||||||| |||||| ||||| ||||||||||| ||||||||||||||||| |||| ||||    
T  50003077 gttaagcgtgcttgacttggagcaatttttggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtga 50003003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 50002387 - 50002254
Alignment:
Q  9 gactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccaca 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||| |||||||||||||||    
T  50002387 gactacatggttgaaggaaggcttataagaattgtttggtactacctttatcaacaagatgcatcttcttttcggtagctcattccataagaactccaca 50002288  T
Q  109 attacgcgtgcttgacttggagaaattttgggat 142  Q
     ||  | ||||||||||||||| |||||||||||    
T  50002287 gttgagtgtgcttgacttggagcaattttgggat 50002254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 7548127 - 7548292
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| |||| || ||||||| ||||||| |||||||||||| || ||||||||||| ||||||| ||||||| |||||| ||||| ||||||    
T  7548127 aggtatgagactacatgattaaaggaagacttataaaaattgtttggtattaactatatcaacaagatgcatattctttttggtagcccatttgataaga 7548226  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttccc 166  Q
    |||||||||||| |||| |||||||||||| | | || ||||| ||||||||||||||||||||||    
T  7548227 actccacaattaagcgtacttgacttggagtagtctttggatgggtgacctaccgagaagtttccc 7548292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 2328351 - 2328458
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||| |||||||    
T  2328351 aggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttctttttggtagcacattccataaga 2328450  T
Q  101 actccaca 108  Q
    ||||||||    
T  2328451 actccaca 2328458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 20061301 - 20061194
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  20061301 aggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 20061202  T
Q  101 actccaca 108  Q
    ||||||||    
T  20061201 actccaca 20061194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 12883560 - 12883735
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||||| |||||||||  ||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| |||| ||||| |    
T  12883560 aggtatgggactgcatgattgaaggaatacttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagctcattccataaaa 12883659  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatg 176  Q
    |||||||| ||| | ||| |||||||| || | |||| |||||  |||||||| | |||||||||| |||||||||    
T  12883660 actccacagttaagtgtgtttgacttgaagtagtttttggatggatgacctactgggaagtttcccagtaagcatg 12883735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 23180781 - 23180908
Alignment:
Q  16 tggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgc 115  Q
    |||||||||||| | |||||||||||| ||||||||||||||||||||| |||| ||||||| |||| |||| |||| |||||||| |||||||||| ||    
T  23180781 tggttgaaggaatgattataagaattgcttggtactacctatatcaacaagatgtatcttctattcgctagcccattccataagaattccacaattaagc 23180880  T
Q  116 gtgcttgacttggagaaattttgggatg 143  Q
    ||||||||||||||||||||||||||||    
T  23180881 gtgcttgacttggagaaattttgggatg 23180908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 30873060 - 30872897
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||||||||| |||||||||||||| ||| ||||||||||||| ||||||||||||||||| ||||||||||||||| |||||  ||||  ||||||    
T  30873060 aggtatgagactgtatggttgaaggaagacttttaagaattgtttgatactacctatatcaacaagatgcatcttctttttggtagtccattctataaga 30872961  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttc 164  Q
    |||||||||||| || ||||||||||| || | | || ||||| ||||||||| || |||||||    
T  30872960 actccacaattaagcatgcttgacttgcagtagtctttggatgggtgacctactgaaaagtttc 30872897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 12728027 - 12728157
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggt-actacctatatcaacatgatgcatcttcttttcggtagcacatttcataag 99  Q
    ||||||| |||  ||||||||||||||| ||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||| ||||||    
T  12728027 aggtatgggacaacatggttgaaggaagacttataagaattgtttggttactgcctatatcaacaagatgcatcttcttttcggtagcacattccataag 12728126  T
Q  100 aactccacaattacgcgtgcttgacttggag 130  Q
    ||||||||| ||| || ||||||||||||||    
T  12728127 aactccacagttaagcatgcttgacttggag 12728157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 16907270 - 16907433
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| || |  ||||  | ||||    
T  16907270 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatacatcttcttttcagtggtccattctacaaga 16907369  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttc 164  Q
    |||||| | ||| ||||| ||||||||||| ||||||| |||| |||||||   ||||||||||    
T  16907370 actccatagttaagcgtgtttgacttggagcaattttgagatgggtgaccttttgagaagtttc 16907433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 2634960 - 2635109
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||||||||||||||   || |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||  ||||||    
T  2634960 aggtatgggactgcatggttgaaggataactcataagaattgtttggtactacctataccaacaagatgcatcttcttttcggtagctcattcaataaga 2635059  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacc 150  Q
    |||||||| ||| ||||| ||| ||||||| ||| || ||||| ||||||    
T  2635060 actccacagttaagcgtgtttggcttggagtaatctttggatgagtgacc 2635109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 31822773 - 31822631
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| |||||||||||||||  ||||||||||| ||||||||||| ||||||||||  ||||||||||||||||||||| || | || ||||    
T  31822773 aggtatgagactacatggttgaaggaagatttataagaattatttggtactacatatatcaacaatatgcatcttcttttcggtagctcaatccaaaaga 31822674  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatg 143  Q
    |||||||| ||| ||||  ||||||||||  ||||||||||||    
T  31822673 actccacagttaagcgtttttgacttggaacaattttgggatg 31822631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 66 - 172
Target Start/End: Original strand, 52250644 - 52250750
Alignment:
Q  66 gatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcc 165  Q
    |||||||||||||||||||||| |||| ||||||||||||||| ||| |||||||||||||| || |||||||||||| ||||||||||| |||||||||    
T  52250644 gatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgaagcaattttgggatgggtgacctaccgggaagtttcc 52250743  T
Q  166 cggtaag 172  Q
    |||||||    
T  52250744 cggtaag 52250750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 66 - 172
Target Start/End: Original strand, 52250981 - 52251087
Alignment:
Q  66 gatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcc 165  Q
    |||||||||||||||||||||| |||| ||||||||||||||| ||| |||||||||||||| || |||||||||||| ||||||||||| |||||||||    
T  52250981 gatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgaagcaattttgggatgggtgacctaccgggaagtttcc 52251080  T
Q  166 cggtaag 172  Q
    |||||||    
T  52251081 cggtaag 52251087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 129
Target Start/End: Original strand, 10820636 - 10820758
Alignment:
Q  9 gactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttctttt--cggtagcacatttcataagaactcca 106  Q
    |||| |||||||||||||||  |||||||||||||||||||||||||||||||| | ||| |||||| ||||  || |  | ||||||||||||| | ||    
T  10820636 gactacatggttgaaggaagatttataagaattgtttggtactacctatatcaataagatacatctttttttttcgatgactcatttcataagaaattca 10820735  T
Q  107 caattacgcgtgcttgacttgga 129  Q
    || ||| ||||||||||||||||    
T  10820736 cagttaagcgtgcttgacttgga 10820758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 2634504 - 2634631
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    |||||||| |||||| || |||||||||||  |||||||||||||||||| |||||  |||| ||||||||||||||||| |||   |||  ||||||||    
T  2634504 gtatgagattgcatgattaaaggaaggcttgcaagaattgtttggtactagctatacaaacaagatgcatcttcttttcgatagtctattcaataagaac 2634603  T
Q  103 tccacaattacgcgtgcttgacttggag 130  Q
    | |||  |||  ||||||||||||||||    
T  2634604 ttcactgttaaacgtgcttgacttggag 2634631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 143
Target Start/End: Complemental strand, 16440676 - 16440547
Alignment:
Q  14 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattac 113  Q
    ||||||||||| ||| |||||||||| |||||| ||||||| ||| ||||| ||||||| ||||||| |||||| ||||  |||| |||| || | |||     
T  16440676 catggttgaagaaagacttataagaactgtttgctactaccgataacaacaagatgcatattctttttggtagctcattctataataacttcaaagttaa 16440577  T
Q  114 gcgtgcttgacttggagaaattttgggatg 143  Q
    | ||| |||||| | || ||||||||||||    
T  16440576 gtgtgattgactcgaagcaattttgggatg 16440547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 169
Target Start/End: Complemental strand, 35010018 - 35009938
Alignment:
Q  89 catttcataagaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggt 169  Q
    |||| ||||||||||||||  ||| ||||||||||||||||| | | || ||||| ||||||||||||||| |||||||||    
T  35010018 cattccataagaactccacggttaagcgtgcttgacttggagtagtctttggatgggtgacctaccgagaattttcccggt 35009938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 151
Target Start/End: Original strand, 8278065 - 8278143
Alignment:
Q  73 cttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacct 151  Q
    |||||||| |||||  ||||||||||  |||||||| ||| |||||||||||||| || |||||||||||| |||||||    
T  8278065 cttctttttggtagtccatttcataaagactccacagttaagcgtgcttgacttgaagcaattttgggatgggtgacct 8278143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 165
Target Start/End: Complemental strand, 16410831 - 16410669
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    ||||| || ||||| |||||||||| ||||||||||||| |||  ||||||| ||| ||||| |||||||||| |||| ||||||  |||  | ||||||    
T  16410831 gtatgggaatgcattgttgaaggaaagcttataagaattatttactactaccaataccaacaagatgcatcttgtttttggtagcctattctagaagaac 16410732  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcc 165  Q
    | || | |||  | || ||||||||||| || |||||||||| | || | | |||||||||||    
T  16410731 ttcaaagttaaacatgtttgacttggagcaagtttgggatgtttaacattctgagaagtttcc 16410669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 7230007 - 7229903
Alignment:
Q  47 gtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgacttggagaaattttgggatgtgt 146  Q
    |||||| ||||||||||| || |||||||| |||||||||  |||| ||||||||||||| |  || || || ||||||||||| |||||| ||||  ||    
T  7230007 gtactaactatatcaacacgaagcatcttcatttcggtagttcattacataagaactccatagataagcatgtttgacttggagcaattttaggattggt 7229908  T
Q  147 gacct 151  Q
    |||||    
T  7229907 gacct 7229903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 31823161 - 31823097
Alignment:
Q  34 taagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataa 98  Q
    |||||||| |||||||||||||||||||| |  |||||||||||||| |||||| |||| |||||    
T  31823161 taagaattatttggtactacctatatcaataaaatgcatcttctttttggtagctcattccataa 31823097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 2739558 - 2739637
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttctttt 80  Q
    ||||||||||||| |||||| | | ||| |||||||||||||||| | ||||| ||||||||||  ||| ||||||||||    
T  2739558 aggtatgagactgtatggttaaggaaagacttataagaattgtttagcactacatatatcaacaatatgtatcttctttt 2739637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 843043 - 842964
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttctttt 80  Q
    ||||||| | ||||||| |||||||||| | | ||||||||||||||||||| | ||  ||||| ||||||| |||||||    
T  843043 aggtatgtgtctgcatgattgaaggaagtcgtgtaagaattgtttggtactatccattccaacaagatgcatgttctttt 842964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 42317663 - 42317709
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggta 49  Q
    |||||||| |||| |||| |||||| |||||||||||||||||||||    
T  42317663 gtatgagattgcacggttaaaggaatgcttataagaattgtttggta 42317709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 19002 - 19174
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||    
T  19002 aggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagattcatcttcttttcggtagctcatttcataaga 19101  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagc 173  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  19102 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagc 19174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 137; Significance: 1e-71; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 17027641 - 17027469
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||    
T  17027641 aggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagattcatcttcttttcggtagctcatttcataaga 17027542  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagc 173  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  17027541 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagc 17027469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 20850357 - 20850539
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  20850357 aggtatgggactgcatggttgaaggaaggcttataagaattgttttgtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 20850456  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||| ||| ||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||| |||| ||||    
T  20850457 actctacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtga 20850539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 13492825 - 13493007
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  13492825 aggtatgagactgcatggttgaaggaaggcttataataattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 13492924  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||| ||| |||||||||||| |||||||||||  ||||| |||||||||| |||| ||||    
T  13492925 actccacagttaagcgtgcttgacttagagcaattttgggatgggtgacctaccggaaagttacccggtaagcgtgcgagtga 13493007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 20896798 - 20896627
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||| |||||||    
T  20896798 aggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagctcattccataaga 20896699  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaag 172  Q
    |||||||  ||| ||||||||| ||||||| |||||||||||| ||||||||||| ||| ||||||||||||    
T  20896698 actccacggttaagcgtgcttggcttggagcaattttgggatgggtgacctaccgggaaatttcccggtaag 20896627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 7911922 - 7912096
Alignment:
Q  9 gactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccaca 108  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||    
T  7911922 gactgcatggttgaaggaaaacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccaca 7912021  T
Q  109 attacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
     ||| || |||||||||||||| |||||||||||| ||||||||||| |||| ||| ||||||||||||| ||||    
T  7912022 gttatgcttgcttgacttggagcaattttgggatgggtgacctaccgggaagattctcggtaagcatgcgagtga 7912096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 13191623 - 13191441
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | || |||||||    
T  13191623 aggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcgttccataaga 13191524  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    ||| |||| ||| ||||||||||||||||| ||||||| |||| |||||| |||| ||||||||||| ||||| |||| ||||    
T  13191523 acttcacagttaagcgtgcttgacttggagcaattttgagatgggtgaccaaccgggaagtttcccgataagcgtgcgagtga 13191441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 16520004 - 16520170
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  16520004 aggtatgagactacatggtcgaaggaaggcttatgagatttgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 16520103  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccg 167  Q
    |||||||| ||| ||||||||||||||||| ||||||| |||| ||||||| ||| |||||||||||    
T  16520104 actccacagttaagcgtgcttgacttggagcaattttgagatgggtgacctgccgggaagtttcccg 16520170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 21312007 - 21312178
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||    
T  21312007 aggtatgagactgcatggttgaaggaaggcttataagaattgttaggtactacctatatcaacaagatgcatcttctttttggtagcccatttcataaga 21312106  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaag 172  Q
    | |||| | |||  |||||||||||||||| | | ||  |||| ||||||||||| ||||||||||||||||    
T  21312107 aatccatagttaaacgtgcttgacttggagcagtcttatgatgagtgacctaccgggaagtttcccggtaag 21312178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 9352098 - 9352280
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| |||||| ||||| || ||||||| | |||||||||||||||||||| |||| |||||||||||||||||||||| |||| |||||||    
T  9352098 aggtatgagactacatggtcgaagggagacttataatatttgtttggtactacctatataaacaagatgcatcttcttttcggtagctcattccataaga 9352197  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||  |||||||| |||||||| |||| ||||    
T  9352198 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctacctggaagtttctcggtaagcgtgcgagtga 9352280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 20126292 - 20126110
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||| ||||||||||| |||||||    
T  20126292 aggtatgagactacatggttgaaggaaggcttataagaatggtttgatactacctatatcaacaagatgcatcttctttttggtagcacattccataaga 20126193  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    | |||||||||| ||||||||||||||||| | | || | ||| | |||||||| ||||||||||| |||||| |||| ||||    
T  20126192 attccacaattaagcgtgcttgacttggagtagtctttgaatgggcgacctacctagaagtttcccagtaagcgtgcgagtga 20126110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 26 - 183
Target Start/End: Original strand, 13492393 - 13492550
Alignment:
Q  26 aaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgact 125  Q
    ||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||  ||| ||||||||||||||| ||| ||||||||||||    
T  13492393 aaggcttataagaattgtttgatattacctatatcaacaagatgcatcttcttttcggtagctaattccataagaactccacagttaagcgtgcttgact 13492492  T
Q  126 tggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    ||||| |||||||||||| ||||||||||| |||||||||| |||||| |||| ||||    
T  13492493 tggagcaattttgggatgggtgacctaccgggaagtttcccagtaagcgtgcgagtga 13492550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 6331022 - 6330897
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||    
T  6331022 aggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaatatgcatcttcttttcggtagctcatttcataaga 6330923  T
Q  101 actccacaattacgcgtgcttgactt 126  Q
    |||||||| ||| |||||||||||||    
T  6330922 actccacagttaagcgtgcttgactt 6330897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 7912346 - 7912518
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||  |||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||| |||| |||||||    
T  7912346 aggtatgggactgcatggttgaaggaaaacttatatgaattgtttggtactacctatatcaacaagatgcattttcttttcggtagctcattccataaga 7912445  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagc 173  Q
    |||||| | |||  |||||||||||||||| |||||||| ||| ||||||| | | ||||||||||| |||||    
T  7912446 actccatagttaaacgtgcttgacttggagcaattttggaatgggtgacctgctgggaagtttcccgttaagc 7912518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 23776477 - 23776640
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| ||||||||||||||| ||||||||||| || |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  23776477 aggtatgggactacatggttgaaggaagacttataagaatcgtctggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataaga 23776576  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcc 165  Q
    ||| ||| |||| |||| |||||||||||| ||||||||||||  |||||||| | |||||||||    
T  23776577 acttcac-attaagcgtacttgacttggagcaattttgggatggatgacctactgggaagtttcc 23776640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 11062321 - 11062487
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||| ||| |||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||| |||||| |||| |||||||    
T  11062321 aggtatgaaactacatggttgaaggaaggcttataagaagtgttttgtactacctatatcaacaagatgcatcttctttttggtagcccattccataaga 11062420  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccg 167  Q
    |||||||| ||| ||||||||||||||||| | | || ||||| |||||||| ||  ||||||||||    
T  11062421 actccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctatcggaaagtttcccg 11062487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 23986427 - 23986245
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||   |||||||    
T  23986427 aggtatgggactacatggttgaaggtaggcttataagaattgtttggtactacctatatgaacaagatgcatcttcttttcggtagctcaaaccataaga 23986328  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    ||| |||| ||| | ||||||||||||||| |||||||||||| ||||||| | | |||||||| ||| |||| |||| ||||    
T  23986327 acttcacagttaagtgtgcttgacttggagcaattttgggatgggtgaccttctgggaagtttcacggaaagcgtgcgagtga 23986245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 143
Target Start/End: Complemental strand, 2681318 - 2681184
Alignment:
Q  9 gactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccaca 108  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||| |||||||||||||||    
T  2681318 gactgcatggttgaatgaagacttataagaattgtttggtactacccatatcaacaagatgcatcttcttttcggtagctcattccataagaactccaca 2681219  T
Q  109 attacgcgtgcttgacttggagaaattttgggatg 143  Q
    |||| |||||||| | |||||  ||||||||||||    
T  2681218 attaagcgtgcttaatttggaacaattttgggatg 2681184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 17731223 - 17731047
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca----tgatgcatcttcttttcggtagcacatttcat 96  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||     |||||||||||||||||||||| ||||   |    
T  17731223 aggtatgggactgcatggttaaaggaagacttataagaattgtttggtactacctatatcaacaagatagatgcatcttcttttcggtagctcattcttt 17731124  T
Q  97 aagaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagc 173  Q
    |||||||||||| ||| ||||||||||||||||| ||||||| |||  |||||||||||  ||||||  ||||||||    
T  17731123 aagaactccacatttaagcgtgcttgacttggagcaattttgagataggtgacctaccggaaagtttatcggtaagc 17731047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 2890949 - 2890767
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| || |||||||||||||| | ||||| |||||||||| ||||| |||| |||||||    
T  2890949 aggtatgggactgcatggttgaaggaaggtttataagaattgttagggactacctatatcaaaaagatgcttcttcttttcagtagcccattccataaga 2890850  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| |||||||||||||| |  | |  | ||||| ||||||||| ||||||||||||| ||||| |||| ||||    
T  2890849 actccacagttaagcgtgcttgacttgaaatagtactaggatgggtgacctactgagaagtttcccgataagcgtgcgagtga 2890767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 15929626 - 15929768
Alignment:
Q  9 gactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccaca 108  Q
    |||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| |||| |||||||||||||||    
T  15929626 gactacatggttgaatgaaggcttataagaattatttggtactacctatatcaacaaaatgcatcttcttttcggtagctcattccataagaactccaca 15929725  T
Q  109 attacgcgtgcttgacttggagaaattttgggatgtgtgacct 151  Q
     ||| ||||| || || || || |||||||||||| |||||||    
T  15929726 gttaagcgtgtttaacatgaagcaattttgggatgggtgacct 15929768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 2720674 - 2720491
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatc-ttcttttcggtagcacatttcataag 99  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||  |||| || |||| |||||| |||| ||||||    
T  2720674 aggtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatattaacaagacacatctttttttttggtagctcattccataag 2720575  T
Q  100 aactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    ||||||||| ||| | ||||||||||||||| | | || ||||| ||||| ||  | ||||||||||| ||||| |||| ||||    
T  2720574 aactccacagttaagtgtgcttgacttggagtagtctttggatgggtgacatattgggaagtttcccgataagcgtgcgagtga 2720491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 17851412 - 17851539
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    ||||| |||||||||||| || ||||||||||||||  ||||||||||||||| |||||||| ||||||||||||||| |||||| ||||  ||||||||    
T  17851412 gtatgggactgcatggttaaaagaaggcttataagatatgtttggtactacctttatcaacaagatgcatcttctttttggtagcccattctataagaac 17851511  T
Q  103 tccacaattacgcgtgcttgacttggag 130  Q
    |||||||||| |||||||||||||||||    
T  17851512 tccacaattaagcgtgcttgacttggag 17851539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 27334197 - 27334301
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||| |||||||    
T  27334197 aggtatggaactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgaatcttcttttcggtagctcattccataaga 27334296  T
Q  101 actcc 105  Q
    |||||    
T  27334297 actcc 27334301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 27394937 - 27395041
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||| |||||||    
T  27394937 aggtatggaactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgaatcttcttttcggtagctcattccataaga 27395036  T
Q  101 actcc 105  Q
    |||||    
T  27395037 actcc 27395041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 9440419 - 9440269
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||  |||||||||||||| ||| |||||||||||||||| |||||||| |||||||||| ||||||| |||||||||||||| || | |||||||    
T  9440419 aggtatggaactgcatggttgaatgaaagcttataagaattgttcggtactacttatatcaacaagatgcattttcttttcggtagctcactccataaga 9440320  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacct 151  Q
    ||| |||| ||| | |||||||| |||||| |||||| ||||| |||||||    
T  9440319 acttcacagttaagtgtgcttgatttggagcaatttttggatgggtgacct 9440269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 172
Target Start/End: Original strand, 21311553 - 21311722
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||| |||||| || |||| ||| ||||||||||| || ||| |||| |||||||||    
T  21311553 gtatgggactgcatggttgaaggaagccttataagaattgtttggtattacctagataaacaagatccatcttctttttggaagctcattccataagaac 21311652  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaag 172  Q
    ||| || ||| ||||||||||||| ||| | | ||  |||| ||||||||||| || |||| ||||||||    
T  21311653 tccgcagttaagcgtgcttgactttgagtagtcttatgatgggtgacctaccgggatgttttccggtaag 21311722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 14771829 - 14771677
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||| ||||||| ||||    ||| |||||||    
T  14771829 aggtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatccatattctttttggtaatctattccataaga 14771730  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctac 153  Q
    |||||||| ||| | ||||| ||| ||||| | | || ||||| |||||||||    
T  14771729 actccacagttaagtgtgctagacgtggagtagtctttggatgagtgacctac 14771677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 3652522 - 3652629
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| |||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||| |||||  |||| |||||||    
T  3652522 aggtatgggactacatggttgaaggaaggcttataagaattgtctgatactacctatatcaacaagatgcatcttctttttggtagttcattccataaga 3652621  T
Q  101 actccaca 108  Q
    ||||||||    
T  3652622 actccaca 3652629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 33775112 - 33774930
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca--tgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||| ||| ||||||||||||||||| ||||||||||||| |||| |||||||||||||||   ||||||||||||||| | |||  |||| |||||||    
T  33775112 gtatgtgaccgcatggttgaaggaaggattataagaattgtctggtgctacctatatcaacaagagatgcatcttctttttgatagtccattccataaga 33775013  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| | ||| |||||||| || | | || ||||| ||||||||| |||||||||  |||||||| |||| ||||    
T  33775012 actccacagttaagtgtgtttgacttgcagtagtctttggatgggtgacctactgagaagtttttcggtaagcgtgcgagtga 33774930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 165
Target Start/End: Original strand, 17850956 - 17851118
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    ||||| |||||||||||| || ||| ||| ||||||  ||||||||||||||| |||||||| ||||||||||||||  |||||| ||||  ||||||||    
T  17850956 gtatgggactgcatggttaaaagaatgctgataagatatgtttggtactacctttatcaacaagatgcatcttctttctggtagcccattctataagaac 17851055  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcc 165  Q
    |||||| ||| ||||||||||||||||| | | || ||||| | ||||||| | |||||||||    
T  17851056 tccacagttaagcgtgcttgacttggagtagtcttcggatgggagacctactgggaagtttcc 17851118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 66 - 172
Target Start/End: Original strand, 28780211 - 28780317
Alignment:
Q  66 gatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcc 165  Q
    |||||||||| ||||||||||| |||| ||||||||||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||| |    
T  28780211 gatgcatcttgttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagttttc 28780310  T
Q  166 cggtaag 172  Q
     ||||||    
T  28780311 tggtaag 28780317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 1991589 - 1991696
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| |||||||| | ||||||||| ||||||||||||||| ||| ||| | |||| |||||||||||||||||||||| ||||||||||||    
T  1991589 aggtatgagactacatggttggaagaaggcttacaagaattgtttggtattacatatctaaacaagatgcatcttcttttcggtagctcatttcataaga 1991688  T
Q  101 actccaca 108  Q
    ||| ||||    
T  1991689 acttcaca 1991696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 31821802 - 31821704
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataag 99  Q
    |||||||||||| |||||||||||||| ||||||||||||| |||||||||| ||||||||||| |||||||||| |||| |||||| |||| ||||||    
T  31821802 aggtatgagactacatggttgaaggaatgcttataagaattatttggtactaactatatcaacaagatgcatcttttttttggtagctcattccataag 31821704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 167
Target Start/End: Complemental strand, 9440954 - 9440801
Alignment:
Q  14 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattac 113  Q
    |||||||||||||| ||||||||||||| ||||||||||| | |||||||| ||||||| |||||||| ||||| ||   |||||||||| |||| |||     
T  9440954 catggttgaaggaatgcttataagaattctttggtactacttttatcaacaagatgcattttcttttcagtagcccaaaccataagaacttcacagttaa 9440855  T
Q  114 gcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccg 167  Q
    | ||| ||||||| ||| |||||||||||| ||||||| |   |||||||||||    
T  9440854 gtgtgtttgactttgagcaattttgggatgggtgaccttcttggaagtttcccg 9440801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 32292921 - 32293055
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||  || |||||| ||||  ||| ||||||  ||||||    
T  32292921 aggtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaaaatacatcttgtttttagtaacacatt--ataaga 32293018  T
Q  101 actccacaattacgcgtgcttgacttggagaaatttt 137  Q
    |||||| | ||| |||  |||||||| ||| ||||||    
T  32293019 actccatagttaagcgaacttgactttgagcaatttt 32293055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 15929235 - 15929338
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| || |||||||| || ||||||||||||||||||||| | |||||||||| | ||||||| |||||||||||||| |||| |||||||    
T  15929235 aggtatgagactacaaggttgaagaaaagcttataagaattgtttggtaatgcctatatcaataagatgcatattcttttcggtagctcattccataaga 15929334  T
Q  101 actc 104  Q
    ||||    
T  15929335 actc 15929338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 20732614 - 20732743
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| |||||||| ||||||||||||||||||| ||||||||||||||||| || |  |||||| |||||||||||||| ||||  |||| |    
T  20732614 aggtatgtgactacatggttgtaggaaggcttataagaattatttggtactacctatattaataatatgcatattcttttcggtagcccattcaataaaa 20732713  T
Q  101 actccacaattacgcgtgcttgacttggag 130  Q
    |||| ||  ||| | |||||||||||||||    
T  20732714 actctacggttaagagtgcttgacttggag 20732743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 20735731 - 20735816
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtag 86  Q
    ||||||| |||| |||| ||| |||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  20735731 aggtatgtgactacatgattgtaggaaggcttataagaattgtttgatactacttatatcaacaagatgcatcttcttttcggtag 20735816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 28065944 - 28065781
Alignment:
Q  5 atgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatc---ttcttttcggtagcacatttcataagaa 101  Q
    ||||||||| ||| ||||| ||| |||||||||||||||||||||||| || |||||||| ||||||||   || |||| ||||||  ||| ||||||||    
T  28065944 atgagactgtatgattgaatgaaagcttataagaattgtttggtactatctctatcaacaagatgcatctttttttttttggtagcttattccataagaa 28065845  T
Q  102 ctccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcc 165  Q
    ||||||||||| || || ||||||| ||| | ||||| |||| || ||||  ||||||||||||    
T  28065844 ctccacaattaagcatgtttgactttgagcagttttgtgatgggtaacctttcgagaagtttcc 28065781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 17205376 - 17205516
Alignment:
Q  2 ggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaa 101  Q
    ||||||| |||||||| ||||| ||||  ||||||||||||||||||||||||| || ||||| ||| |||||| |||| |||||| |||| ||||||||    
T  17205376 ggtatgaaactgcatgattgaatgaagaattataagaattgtttggtactacctttaccaacaagattcatcttgtttt-ggtagcccattccataagaa 17205474  T
Q  102 ctccacaattacgcgtgcttgacttggagaaattttgggatg 143  Q
    |||||   |||  | ||||||| |||||| ||||||||||||    
T  17205475 ctccattgttaaacatgcttgatttggagtaattttgggatg 17205516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 145
Target Start/End: Complemental strand, 30729947 - 30729805
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    ||||||||| |||||||||||||| | || |||| |||||||||||||||| ||||| ||||||||  |||||||||| |||||   |||  ||||||||    
T  30729947 gtatgagacagcatggttgaaggaggactcataaaaattgtttggtactacgtatataaacatgattgatcttcttttgggtagtcaattctataagaac 30729848  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatgtg 145  Q
    |  | | ||| |||| ||||| || ||| ||||||||||||||    
T  30729847 tttatagttaagcgttcttgaatttgagcaattttgggatgtg 30729805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 108
Target Start/End: Original strand, 28583013 - 28583106
Alignment:
Q  15 atggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccaca 108  Q
    ||||||||| ||||||||||||||||| |||| ||| | ||||||||||| |||||||| ||||| ||||||  |||| |||||||| ||||||    
T  28583013 atggttgaatgaaggcttataagaattatttgatacgatctatatcaacaagatgcatcatctttccggtagttcattccataagaaatccaca 28583106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9440538 - 9440485
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacc 54  Q
    ||||||| |||| |||||||||| ||||||||||||||||||||||||||||||    
T  9440538 aggtatgggacttcatggttgaatgaaggcttataagaattgtttggtactacc 9440485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 3885194 - 3885063
Alignment:
Q  4 tatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaact 103  Q
    ||||||||||||| |||||||||| ||||| ||||||||||||||||||| ||||  ||||  || ||   |||||| ||||||  ||| ||||||||||    
T  3885194 tatgagactgcatagttgaaggaatgcttaaaagaattgtttggtactacatatactaacaaaataca---tctttttggtagcttattccataagaact 3885098  T
Q  104 ccacaattacgcgtgcttgacttggagaaattttg 138  Q
     || | ||   |||||||||||||||| |||||||    
T  3885097 tcaaagttgaacgtgcttgacttggagcaattttg 3885063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10964340 - 10964401
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaa 62  Q
    ||||||||||||| ||||| |||| ||| |||| ||||||||||||||||||| ||||||||    
T  10964340 aggtatgagactgtatggtagaagaaagacttacaagaattgtttggtactacatatatcaa 10964401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 143
Target Start/End: Original strand, 12194374 - 12194506
Alignment:
Q  10 actgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaa 109  Q
    |||||||| |||||| ||| ||||||| | || ||||| |||| ||||||||||| |||||||||||||||   ||   |||| |||||||||||||||     
T  12194374 actgcatgattgaagaaagacttataa-atttttttggcactatctatatcaacaagatgcatcttcttttttataattcattccataagaactccacag 12194472  T
Q  110 ttacgcgtgcttgacttggagaaattttgggatg 143  Q
    ||| || || ||||| ||||| |||||| |||||    
T  12194473 ttaagcatgtttgacatggagcaattttaggatg 12194506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 183
Target Start/End: Original strand, 3652658 - 3652741
Alignment:
Q  100 aactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    ||||||||| ||| || |||||||||||||| | | || ||||| ||||||||||| |||| |||||||||||| |||| ||||    
T  3652658 aactccacagttaagcttgcttgacttggagtagtctttggatgggtgacctaccgggaagcttcccggtaagcgtgcgagtga 3652741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 3653051 - 3653115
Alignment:
Q  114 gcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcg 178  Q
    ||||||||||||||||| | | || ||||| |||||||| |||||||||||||| ||||| ||||    
T  3653051 gcgtgcttgacttggagtagtctttggatgggtgacctatcgagaagtttcccgataagcgtgcg 3653115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 9441089 - 9441135
Alignment:
Q  4 tatgagactgcatggttgaaggaaggcttataagaattgtttggtac 50  Q
    |||| |||| |||| ||||||||| ||||||||||||||||||||||    
T  9441089 tatgtgactacatgattgaaggaaagcttataagaattgtttggtac 9441135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 3653015 - 3653051
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataag 37  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  3653015 aggtatgggactgcatggttgaacgaaggcttataag 3653051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 1256 - 1438
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||| |||||||    
T  1256 aggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatataaacaagatgcatcttcttttcggtagctcattccataaga 1355  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||| |||| ||||    
T  1356 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtga 1438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 2e-70; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 2941867 - 2941685
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  2941867 aggtatgggactgcatggttgaaggaaggctgataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 2941768  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||| |||| ||||    
T  2941767 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtga 2941685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 13125246 - 13125064
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||| |||||||    
T  13125246 aggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagctcattccataaga 13125147  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||| |||||||||| |||||| |||| ||||    
T  13125146 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccagtaagcgtgcgagtga 13125064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 34405701 - 34405519
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  34405701 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaggatgcatcttcttttcggtagctcattccataaga 34405602  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||| |||| ||||    
T  34405601 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtga 34405519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 2193292 - 2193464
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||| ||    
T  2193292 aggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctattcggtagctcatttcatagga 2193391  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagc 173  Q
    |||||||| ||| |||||||||| |||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  2193392 actccacagttaagcgtgcttgatttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagc 2193464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 2465777 - 2465951
Alignment:
Q  9 gactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccaca 108  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||    
T  2465777 gactacatggttgaaggaaggcttataagagttgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccaca 2465876  T
Q  109 attacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
     ||| ||||||||||||||||| |||||||||||| ||||||||||| ||| |||||||||||||||||| ||||    
T  2465877 gttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaaatttcccggtaagcatgcgagtga 2465951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 9 - 173
Target Start/End: Original strand, 2189188 - 2189352
Alignment:
Q  9 gactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccaca 108  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||    
T  2189188 gactgcatggttgaaagaaggcttataagaattgtttggcactacctatatcaacaagatgcatcttcttttcgatagctcatttcataagaactccaca 2189287  T
Q  109 attacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagc 173  Q
     ||| ||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  2189288 gttaagcgtgcttgacttggagcaattttgggatgagtgacctaccgggaagtttcccggtaagc 2189352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 36422288 - 36422458
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  36422288 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataaga 36422387  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaag 172  Q
    |||||||| ||| ||||||||||||||||| || ||||||||| ||||||||||| ||||||||||||||||    
T  36422388 actccacagttaagcgtgcttgacttggagcaa-tttgggatgggtgacctaccgggaagtttcccggtaag 36422458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 9124995 - 9125177
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  9124995 aggtatgagactgtatggttaaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 9125094  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| |||||||||||| |||| |||||||||||| ||||||||||| ||||||| ||||||||| |||| ||||    
T  9125095 actccacagttaagcgtgcttgactcggagcaattttgggatgggtgacctaccgggaagttttccggtaagcgtgcgagtga 9125177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 2465960 - 2466136
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||| |||| |||||||    
T  2465960 aggtatgggactacatggttgaaggaaggcttataagagttgtttggtactacctatatcaacaagttgcatcttcttttcggtagctcattccataaga 2466059  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgc 177  Q
    |||||||| ||| ||||||||||||||||| ||||| |||||| ||||||||||| ||| |||||||||||||||||    
T  2466060 actccacagttaagcgtgcttgacttggagcaatttcgggatgggtgacctaccgggaaatttcccggtaagcatgc 2466136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 28495890 - 28496072
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| |||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  28495890 aggtatgggactacatggttgaaggaaggcttataagaactgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 28495989  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||  | ||||||||||||||||| |||| ||||    
T  28495990 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctattgggaagtttcccggtaagcgtgcgagtga 28496072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 42515580 - 42515762
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  42515580 aggtatgagactacatggttgaaggaaggcttataagaagtgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 42515679  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| |||||||||   ||| ||| ||||||||| |||| ||||    
T  42515680 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctacatggaaattttccggtaagcgtgcgagtga 42515762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 6719184 - 6719003
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  6719184 aggtatgggactacatggttgaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 6719085  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||| | ||| ||||||||||||||||| || ||||||||| ||||| || || ||| ||||||||||||| |||| ||||    
T  6719084 actccagagttaagcgtgcttgacttggagtaa-tttgggatgggtgacatatcgggaactttcccggtaagcgtgcgagtga 6719003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 18833322 - 18833492
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||  ||||||||||||| |||| ||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||  ||| |||||||    
T  18833322 aggtatggaactgcatggttgagggaaagcttatatgaattgtttagtactacctatatcaacaagatgcatcttcttttcggtagctaattacataaga 18833421  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaa 171  Q
    |||||||| ||| ||||| ||||||| ||| |||||||||||| ||||||||||| |||||||||||||||    
T  18833422 actccacagttaagcgtgtttgactttgagcaattttgggatgggtgacctaccgggaagtttcccggtaa 18833492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 28495718 - 28495564
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| ||||||||||||||| |||||||||||||||  ||  |||||||||||||| ||||||||||||||| |||||| |||| |||||||    
T  28495718 aggtatgggactacatggttgaaggaagacttataagaattgttgagttttacctatatcaacaagatgcatcttcttttaggtagctcattccataaga 28495619  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccg 155  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| |||||||||||    
T  28495618 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccg 28495564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 42515128 - 42515310
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| |||| |||||||    
T  42515128 aggtatgagactgcatgattgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagctcattccataaga 42515227  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| | | || ||||| ||||| ||||  ||| |||  |||||||| |||| ||||    
T  42515228 actccacagttaagcgtgcttgacttggagtagtctttggatgggtgacataccaggaactttttcggtaagcgtgcgggtga 42515310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 679853 - 680034
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| || | ||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||| |||||| |||| |||||||    
T  679853 aggtatgggagtacatggctgaaggaaggcttataagaattgtt-ggtactacctatatcaacaagatgcatattctttttggtagcccattccataaga 679951  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| | | || ||||| ||||||| ||| |||||||| |||||| |||||| ||||    
T  679952 actccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctgccgggaagtttcgcggtaaacatgcgagtga 680034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 35474231 - 35474060
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| ||||||||||| ||| |||||||||||||||| ||||||| |||||||||| ||||||||||||||| |||||| |||| |||||||    
T  35474231 aggtatgagactacatggttgaagaaagacttataagaattgtttagtactacttatatcaacaagatgcatcttctttttggtagctcattccataaga 35474132  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaag 172  Q
    |||||||| ||| ||||| ||||||||||| | | || ||||| ||||| ||||| ||| |||| |||||||    
T  35474131 actccacagttaagcgtgtttgacttggagtagtctttggatgggtgacgtaccgggaattttctcggtaag 35474060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 46425777 - 46425940
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| ||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |  ||| |||||||    
T  46425777 aggtatgggactacatggttgaaataaggcttataagaattgtttggtattacctatatcaacaagatgcatcttcttttcggtatcttattccataaga 46425876  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcc 165  Q
    |||||||| ||| ||||||||||||||||| | | ||  |||| |||||||| ||||||||||||    
T  46425877 actccacagttaagcgtgcttgacttggagtagtcttatgatgggtgaccta-cgagaagtttcc 46425940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 49 - 183
Target Start/End: Complemental strand, 13122567 - 13122433
Alignment:
Q  49 actacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtga 148  Q
    ||||| ||||| |||| |||||||||||||||||||||| |||| ||||||||||||||| ||| |||||||||| |||||| |||||||||||| ||||    
T  13122567 actacatatattaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgatttggagcaattttgggatgggtga 13122468  T
Q  149 cctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    ||||||| ||||||||||||||||| |||| ||||    
T  13122467 cctaccgggaagtttcccggtaagcgtgcgagtga 13122433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 6747708 - 6747583
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||  ||| ||||| |    
T  6747708 aggtatgatactacatggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcctattccataaaa 6747609  T
Q  101 actccacaattacgcgtgcttgactt 126  Q
    |||||||| ||| |||||||||||||    
T  6747608 actccacagttaagcgtgcttgactt 6747583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 173
Target Start/End: Complemental strand, 22529332 - 22529173
Alignment:
Q  14 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattac 113  Q
    |||||||||||||||||||||||||| |||||||||||| |||||| |||| |||||||||||||||| ||| | |||| || ||||||| |||| |||     
T  22529332 catggttgaaggaaggcttataagaaatgtttggtactatctatataaacaagatgcatcttcttttcagtaactcattacaaaagaacttcacagttaa 22529233  T
Q  114 gcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagc 173  Q
    ||||| ||||||||||| | | || ||||| ||||||||| |||||||||| ||||||||    
T  22529232 gcgtgtttgacttggagtagtctttggatgggtgacctactgagaagtttctcggtaagc 22529173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 25182399 - 25182526
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| | |||| |||||||||    
T  25182399 gtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatacatcttattttcggtaactcattccataagaac 25182498  T
Q  103 tccacaattacgcgtgcttgacttggag 130  Q
    | |||| ||| | ||| |||||||||||    
T  25182499 ttcacagttaagtgtgtttgacttggag 25182526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 2611762 - 2611608
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||||||||  ||||| |||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||| |||||| ||||  ||||||    
T  2611762 aggtatgagactatatggtggaaggaaggcttataagaattgtttggtactatctataacaacaagatgcatcttctttttggtagcccattctataaga 2611663  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccg 155  Q
    |||||| | ||| |||||||| |||||||| | | || ||||| |||||||||||    
T  2611662 actccatagttaagcgtgctttacttggagtagtctttggatgggtgacctaccg 2611608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 5406697 - 5406556
Alignment:
Q  2 ggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaa 101  Q
    |||||| ||||||||||||||||||||  ||||||||||||||||||| |||||||||||||| |||||||||| |||| ||| || ||   ||||||||    
T  5406697 ggtatgggactgcatggttgaaggaagatttataagaattgtttggtattacctatatcaacaagatgcatcttatttttggttgcccaaaccataagaa 5406598  T
Q  102 ctccacaattacgcgtgcttgacttggagaaattttgggatg 143  Q
    ||||||| ||| ||||||||||||| ||| ||||||||||||    
T  5406597 ctccacagttaagcgtgcttgactttgagcaattttgggatg 5406556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 11517498 - 11517395
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||| |||||||    
T  11517498 aggtatgggactgcatggt-gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatctacttttcggtagctcattccataaga 11517400  T
Q  101 actcc 105  Q
    |||||    
T  11517399 actcc 11517395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 4 - 173
Target Start/End: Complemental strand, 29039127 - 29038958
Alignment:
Q  4 tatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaact 103  Q
    |||| |||| |||||||||| | ||||||| ||||||||||||||||||||||||||||||  |||||||||||||| | ||   |||| ||||||||||    
T  29039127 tatgtgactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttctttttgataatccattccataagaact 29039028  T
Q  104 ccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagc 173  Q
    | ||| ||| ||||||||||||||||| | | || |||||  ||||||||||  ||||||||||||||||    
T  29039027 ctacatttaagcgtgcttgacttggagtagtctttggatggatgacctaccggtaagtttcccggtaagc 29038958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 29357566 - 29357441
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||| | ||||||||||    
T  29357566 aggtatgggactgcatggttgaaggaatgtttataagaattgtttggtactaactatatcaacaagatgcatcttcttttcgatagcccgtttcataaga 29357467  T
Q  101 actccacaattacgcgtgcttgactt 126  Q
    ||| |||| |||  |||| |||||||    
T  29357466 actacacagttaaccgtgtttgactt 29357441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 61 - 172
Target Start/End: Complemental strand, 7646528 - 7646417
Alignment:
Q  61 aacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaag 160  Q
    |||| |||||||||||||||||||||| |||| |||||||||| |||| ||| ||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  7646528 aacaagatgcatcttcttttcggtagctcattccataagaacttcacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaag 7646429  T
Q  161 tttcccggtaag 172  Q
    |||| |||||||    
T  7646428 tttctcggtaag 7646417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 35527216 - 35527070
Alignment:
Q  16 tggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgc 115  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| ||||  |||| |||| |||||||||| ||| ||    
T  35527216 tggttgaaagaaggcttataagaattgtttggtgctacctatatcaacaagatgcatattcttttcagtagtccattccataggaactccacagttaagc 35527117  T
Q  116 gtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtt 162  Q
     |||||||||||||| | | || | ||| ||||||||| ||||||||    
T  35527116 atgcttgacttggagtagtctttgcatgggtgacctactgagaagtt 35527070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 31743930 - 31743834
Alignment:
Q  5 atgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaa 101  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||| ||||||||||| |||||||||||||||||||||| |||| ||||||||    
T  31743930 atgagactgcatggttgaaggaatgcttataagaatggtttggtgctatctatatcaacaagatgcatcttcttttcggtagcccattccataagaa 31743834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 26421868 - 26421753
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    |||||||||||||||||||||| |||||| |||||||||||| |||||| |||||| ||||| |||| ||||||||||||||||| |||| |||||||||    
T  26421868 gtatgagactgcatggttgaagtaaggctcataagaattgttaggtactccctataccaacaagatgaatcttcttttcggtagcccattccataagaac 26421769  T
Q  103 tccacaattacgcgtg 118  Q
    | |||| ||| |||||    
T  26421768 tacacagttaagcgtg 26421753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 31406686 - 31406574
Alignment:
Q  9 gactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccaca 108  Q
    ||||| ||||||||| || | ||||| |||||||||||||  |||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||    
T  31406686 gactgaatggttgaaagatgacttattagaattgtttggtgttacctatatcaacaagatgcatcttcttttcggtagcccgtttcataagaactccaca 31406587  T
Q  109 attacgcgtgctt 121  Q
     ||| ||||||||    
T  31406586 gttaagcgtgctt 31406574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 66 - 183
Target Start/End: Original strand, 7646516 - 7646633
Alignment:
Q  66 gatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcc 165  Q
    |||||||||| ||||||||| | |||| ||||||||||||||| ||| ||||||||||||||||| |||||||||||| |||||||||||  |||||| |    
T  7646516 gatgcatcttgttttcggtaactcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccggaaagttttc 7646615  T
Q  166 cggtaagcatgcgtgtga 183  Q
    || ||||| |||| ||||    
T  7646616 cgataagcgtgcgagtga 7646633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 11372487 - 11372636
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||| | || ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| || |||| |||||| ||   |||||||    
T  11372487 aggtatgaaattgtatggttgaaggaaggcttataagaattgtttggtactacctgtaccaacatgatgcatgttatttttggtagctcaaaccataaga 11372586  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacc 150  Q
    |||||| | ||| ||  | |||||||  || |||||||||||| ||||||    
T  11372587 actccaaagttaagcacgtttgacttatagcaattttgggatgagtgacc 11372636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 129
Target Start/End: Complemental strand, 26421401 - 26421287
Alignment:
Q  15 atggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacg 114  Q
    |||||||||||||| ||||||||||||| ||| ||||||||||||||||| ||||||| || ||||||||||  |||| ||||||||||||||| |||      
T  26421401 atggttgaaggaagacttataagaattgcttgatactacctatatcaacaagatgcatatttttttcggtagtccattccataagaactccacagttaaa 26421302  T
Q  115 cgtgcttgacttgga 129  Q
    |||| |||| |||||    
T  26421301 cgtgtttgaattgga 26421287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 36015519 - 36015414
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    |||||||||| |||||||||||||| ||||| ||||||||||||||||||| |||||||||| ||||| |||||||||   |||| |||| |||||||||    
T  36015519 gtatgagactccatggttgaaggaaagcttaaaagaattgtttggtactacatatatcaacaagatgcctcttcttttaaatagcccattccataagaac 36015420  T
Q  103 tccaca 108  Q
    | ||||    
T  36015419 ttcaca 36015414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 43233449 - 43233534
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtag 86  Q
    ||||||| ||||| |||||| ||||||| ||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||    
T  43233449 aggtatgtgactgtatggttaaaggaagacttataagaattgtttggtactatctatatcaacaagatgcatctttttttcggtag 43233534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 9623248 - 9623371
Alignment:
Q  5 atgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactc 104  Q
    |||||||| |||||| ||||||   ||||||||||||||||| ||| ||||||||||||| ||||||||||| |||||||||  ||||  ||||||||||    
T  9623248 atgagactccatggtagaaggagtacttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagttcattctataagaactc 9623346  T
Q  105 cacaattacgcgtgcttgacttgga 129  Q
    |||| ||| ||||| ||||||||||    
T  9623347 cacagttaagcgtgtttgacttgga 9623371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 20966087 - 20966235
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||||||||||||| |||||||| | |||||||||||| ||| ||| |||||||| ||||| |||| || || ||||||||||| |||| |||||||    
T  20966087 aggtatgagactgcatgattgaaggatgacttataagaattattttgtaatacctataccaacaagatgtatattattttcggtagctcattccataaga 20966186  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgac 149  Q
    ||| |||| |||  | ||| ||||||| |  |||||||||||| |||||    
T  20966187 acttcacagttaaacatgcatgacttgtatcaattttgggatgggtgac 20966235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 165
Target Start/End: Original strand, 1628763 - 1628913
Alignment:
Q  12 tgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaatt 111  Q
    ||||||||||||| |||||||||||   ||||||||||||| | ||||||||| |||||||||||||||  | ||| |||  ||||||||||||| | ||    
T  1628763 tgcatggttgaagaaaggcttataa---ttgtttggtactatcgatatcaacaagatgcatcttcttttttgaagcccataccataagaactccatagtt 1628859  T
Q  112 acgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcc 165  Q
    | | ||  ||| ||||||| |||||||||||| ||||||| | | |||||||||    
T  1628860 aagtgtatttggcttggagcaattttgggatgggtgacctcctgcgaagtttcc 1628913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 16192368 - 16192457
Alignment:
Q  14 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaact 103  Q
    |||| ||||| ||||| ||||||||||||||||||| |||||| ||||||| ||||||||||| ||| |||||| |||| ||||||||||    
T  16192368 catgattgaatgaaggattataagaattgtttggtattacctacatcaacaagatgcatcttcgttttggtagcccattccataagaact 16192457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 26957667 - 26957604
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 64  Q
    |||||||  ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26957667 aggtatggaactacatggttgaaagaaggcttataagaattgtttggtactacctatatcaaca 26957604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 79 - 178
Target Start/End: Complemental strand, 43776322 - 43776223
Alignment:
Q  79 ttcggtagcacatttcataagaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcg 178  Q
    ||||||||| |||| ||||||||||||||| ||| ||||||||||||||||| |||||||| ||| ||||||| | | ||||||| || |||||| ||||    
T  43776322 ttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttggaatgggtgacctgcggggaagttttccagtaagcgtgcg 43776223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 13124811 - 13124757
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacct 55  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  13124811 aggtatgggactgcatggttgaaggaaggcttataagaattgtgtggtactacct 13124757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 37672196 - 37672321
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||| |||||||||||||| |  |||| |||||| |||||||||||||||| | || ||||| |||||| |||||||| | |||   |||||||||||    
T  37672196 aggtataagactgcatggttgcaaaaaggtttataataattgtttggtactacttgtaccaacaagatgcaacttctttttgttagttgatttcataaga 37672295  T
Q  101 actccacaattacgcgtgcttgactt 126  Q
    | | |||| ||| ||||| |||||||    
T  37672296 aatacacagttaagcgtgtttgactt 37672321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 6585647 - 6585707
Alignment:
Q  4 tatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 64  Q
    ||||||| |||||| ||||| |||| ||||||| |||||||||||||||||||||||||||    
T  6585647 tatgagattgcatgattgaaagaagacttataaaaattgtttggtactacctatatcaaca 6585707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 16811956 - 16811900
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctat 57  Q
    |||||||||||| |||||||||||||| ||||||||||||||||| |||||| ||||    
T  16811956 aggtatgagactacatggttgaaggaatgcttataagaattgttttgtactatctat 16811900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 2490077 - 2490136
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaa 62  Q
    ||||| ||||||||| ||||||||| ||||||||||| |||||| |||||||||||||||    
T  2490077 gtatgtgactgcatgattgaaggaatgcttataagaagtgtttgttactacctatatcaa 2490136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 33316764 - 33316885
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| ||||||||||||||   ||||||||||||||||  | ||| |||||||||| ||||     ||||||||||||| ||    ||||||    
T  33316764 aggtatgagactacatggttgaaggaaaaattataagaattgtttgacaatacttatatcaacaagatg-----tcttttcggtagcccaaactataaga 33316858  T
Q  101 actccacaattacgcgtgcttgacttg 127  Q
    ||||||||||||  |||| ||||||||    
T  33316859 actccacaattaaacgtgtttgacttg 33316885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 11372935 - 11373060
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||| |||||||||||| |||| ||| ||||||||||||  || || ||||| ||||| ||||  |||||||||  |||||  |   |||||||    
T  11372935 aggtatgagattgcatggttgaatgaagacttgtaagaattgtttcatagtatctataccaacaagatgagtcttctttttcgtagcctaaaccataaga 11373034  T
Q  101 actccacaattacgcgtgcttgactt 126  Q
    ||| |||||||| | |||||||||||    
T  11373035 actacacaattaagtgtgcttgactt 11373060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 172
Target Start/End: Complemental strand, 3305377 - 3305287
Alignment:
Q  82 ggtagcacatttcataagaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaag 172  Q
    |||||| |||| ||||| |||| |||| ||| |||||||||| |||||| | | || ||||| |||||||||||  |||||||| ||||||    
T  3305377 ggtagctcattacataaaaacttcacagttaagcgtgcttgatttggagtagtctttggatgggtgacctaccggaaagtttcctggtaag 3305287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 3305420 - 3305374
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggta 49  Q
    ||||| |||| |||||||||| |||||||||| ||||||||||||||    
T  3305420 gtatgggactacatggttgaatgaaggcttatgagaattgtttggta 3305374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 7461424 - 7461344
Alignment:
Q  37 gaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtg 118  Q
    |||||||||| ||||| |||||| |||| ||| ||||||||||| |||||  || ||||||||||||| ||| ||| |||||    
T  7461424 gaattgtttgatactaactatataaacaagatacatcttctttttggtagttca-ttcataagaactctacagttaagcgtg 7461344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 135; Significance: 2e-70; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 12692103 - 12691921
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  12692103 aggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 12692004  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||| | ||||||||||||||||| |||| ||||    
T  12692003 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctactgggaagtttcccggtaagcgtgcgagtga 12691921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 44471429 - 44471257
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  44471429 aggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 44471330  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagc 173  Q
    |||||||| ||| |||||||||| |||||| |||||||||||| ||||||||||| ||| |||||||||||||    
T  44471329 actccacagttaagcgtgcttgatttggagcaattttgggatgggtgacctaccgggaaatttcccggtaagc 44471257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 49998680 - 49998843
Alignment:
Q  9 gactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccaca 108  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||    
T  49998680 gactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccaca 49998779  T
Q  109 attacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaag 172  Q
     ||| ||||| ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  49998780 gttaagcgtgtttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaag 49998843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 7678726 - 7678555
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| | || ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||  ||| |||||||    
T  7678726 aggtatggggctacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagcttattccataaga 7678627  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaag 172  Q
    |||||||| ||| | ||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  7678626 actccacagttaagtgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaag 7678555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 9 - 173
Target Start/End: Complemental strand, 23350379 - 23350215
Alignment:
Q  9 gactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccaca 108  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| | || |||||||||| || |    
T  23350379 gactgcatggttgaaggaaggcttataagaattgtttggtacttcctatatcaacaagatgcatcttcttttcggtagctccttccataagaacttcata 23350280  T
Q  109 attacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagc 173  Q
     ||| ||||||||||||||||| ||||||||||||  ||||||||||||||||||| | ||||||    
T  23350279 gttaagcgtgcttgacttggagcaattttgggatggatgacctaccgagaagtttctctgtaagc 23350215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 44470976 - 44470797
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    ||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||| | |||| |||||||||    
T  44470976 gtatgtgactgtatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctgttc-gtaactcattccataagaac 44470878  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||| ||| ||||||||||||||||| ||||||||||||  |||||||||| ||||||||||||||||| |||| ||||    
T  44470877 tccacagttaagcgtgcttgacttggagcaattttgggatggttgacctaccgggaagtttcccggtaagcgtgcgagtga 44470797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 35871664 - 35871833
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| |||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||| |||||||||||||| |||| |||||||    
T  35871664 aggtatgggacttcatggttgaaggaaggcttatatgaattgtttggtaccacctatatcaacaagatgcat-ttcttttcggtagctcattccataaga 35871762  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaa 171  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| |||||||| ||  ||||||||||||||    
T  35871763 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctatcggaaagtttcccggtaa 35871833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 50398634 - 50398460
Alignment:
Q  9 gactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccaca 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||| |    
T  50398634 gactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccata 50398535  T
Q  109 attacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
     ||| ||||||||||||||||| | | ||  |||| ||||||||||| ||||||| ||||||||| |||| ||||    
T  50398534 gttaagcgtgcttgacttggagtattcttatgatgggtgacctaccgggaagtttaccggtaagcgtgcgagtga 50398460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 5 - 173
Target Start/End: Complemental strand, 4127989 - 4127821
Alignment:
Q  5 atgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactc 104  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||| ||||||||||     
T  4127989 atgagactatatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagccaattccataagaactt 4127890  T
Q  105 cacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagc 173  Q
    || | ||| ||||||||| ||| ||| |||||||||||| |||||||||||| |||||| |||||||||    
T  4127889 cagagttaagcgtgcttggcttagagcaattttgggatgggtgacctaccgaaaagttttccggtaagc 4127821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 24629084 - 24628910
Alignment:
Q  1 aggtatgagactgcatggttgaaggaa---ggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcata 97  Q
    ||||||| |||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| | || ||||    
T  24629084 aggtatgggactgcatggttaaaggaattaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagctcgttccata 24628985  T
Q  98 agaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaag 172  Q
    ||||||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||| ||| |||| |||||||    
T  24628984 agaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgcgaaatttctcggtaag 24628910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 24629537 - 24629383
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | | || |||||||    
T  24629537 aggtatgggactgcatggttaaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtacctcgttccataaga 24629438  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccg 155  Q
    | |||||| ||| ||||||||||||||||| |||||||||||| |||||||||||    
T  24629437 attccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccg 24629383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 31 - 171
Target Start/End: Complemental strand, 50814899 - 50814759
Alignment:
Q  31 ttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgacttggag 130  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||| ||||||||||||||| ||| |||||||||||||||||    
T  50814899 ttataagaattgtttggtactatctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggag 50814800  T
Q  131 aaattttgggatgtgtgacctaccgagaagtttcccggtaa 171  Q
     ||||||||||||  |||||||||| |||||||||||||||    
T  50814799 caattttgggatggatgacctaccgggaagtttcccggtaa 50814759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 1464183 - 1464345
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||| | ||| |||||| |||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  1464183 aggtatgagaatacatagttgaaagaaaacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataaga 1464282  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagttt 163  Q
    ||| |||||||  |||||||| |||||||| |||||||||||| ||||||| | |||||||||    
T  1464283 acttcacaatttagcgtgcttaacttggagcaattttgggatgggtgaccttctgagaagttt 1464345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 50399097 - 50398943
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  50399097 aggtatgagattacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacacgatgcatcttcttttcggtagctcattccataaga 50398998  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccg 155  Q
    |||||||| ||| ||||| ||||||||||| | | ||  |||| |||||||||||    
T  50398997 actccacagttaagcgtgtttgacttggagtattcttatgatgggtgacctaccg 50398943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 51331385 - 51331231
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||| ||||||||||||    
T  51331385 aggtatgggactacatggttgaaggaaggcttataagaattgtttggtactatctatatcaacaagatacatcttcttttcggtagctcatttcataaga 51331286  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccg 155  Q
    |||||||| ||| ||||||||||||||||| | | ||  |||| |||||||||||    
T  51331285 actccacagttaagcgtgcttgacttggagtattcttatgatgggtgacctaccg 51331231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 23943333 - 23943164
Alignment:
Q  14 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattac 113  Q
    ||||||||||||||| ||||||| || | |||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||| |||     
T  23943333 catggttgaaggaagacttataaaaaatatttggtactacctatatcaacaagatgcatcttctttttggtagcacattccataagaactccacagttaa 23943234  T
Q  114 gcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    ||||||||||||||||| | | || ||||| |||||| |||| ||||||||||||||||| |||| ||||    
T  23943233 gcgtgcttgacttggagtagtctttggatgggtgaccaaccgggaagtttcccggtaagcgtgcgagtga 23943164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 1645853 - 1645690
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| ||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||| |||| |||||||    
T  1645853 aggtatgggactacatggttgaaggaagacttataagaattgtttggtattacctatatcaacaagatgcatcttctttttggtagcccattccataaga 1645754  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttc 164  Q
    |||||||| ||| ||||||||||||||||| | | || ||||| ||||||||||  ||||||||    
T  1645753 actccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctaccaggaagtttc 1645690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 23942893 - 23942729
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||  ||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||| |||||||    
T  23942893 aggtatggaactacatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttttgtagcacattccataaga 23942794  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcc 165  Q
    |||||||| ||| ||||||||||||||||| | | || |||||  ||||||||||  ||||||||    
T  23942793 actccacagttaagcgtgcttgacttggagtagtctttggatggatgacctaccggaaagtttcc 23942729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 9423960 - 9423780
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||   ||||| |||| ||||||||     
T  9423960 gtatgggactgcatggttgaaagaaggcttataataattgtttggtactacctatatcaacaagatgcatcttctttctagtagcccattccataagaat 9423861  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    | |||||||| | |||||||| |||||| | | || ||||| ||||||||||| ||| ||||||| |||||||||| ||||    
T  9423860 ttcacaattaagtgtgcttgaattggagtagtcttaggatgggtgacctaccgggaaatttcccgttaagcatgcgagtga 9423780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 31817954 - 31817774
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||  ||||||||||||||    
T  31817954 gtatgggactgcatggttgaaggaaggcttataagaattgttcggtactacctataccaacaagatgcatcttcttttcggtagtccatttcataagaac 31817855  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    | || | ||| |||||||||||||| || | |||| ||||| | ||||| | | |||||||| ||| |||| |||| ||||    
T  31817854 ttcatagttaagcgtgcttgacttgtagtagttttaggatgggcgaccttcggtgaagtttcgcggaaagcgtgcgagtga 31817774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 3169242 - 3169424
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||| | || | |||||||    
T  3169242 aggtatgggactacatggttgaaggaagacttataaaaattgtttggtactacctatatcaacaagatgcatcttctttttggtaacccaatccataaga 3169341  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| | | || ||||| ||||||||||   |||||||  ||||||| |||| ||||    
T  3169342 actccacacttaagcgtgcttgacttggagtagtctttggatgagtgacctaccagaaagtttcttggtaagcgtgcgagtga 3169424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 21220435 - 21220271
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||| |||  ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | ||||  ||||||    
T  21220435 aggtatgaaactatatggttgaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtaactcattctataaga 21220336  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttccc 166  Q
    ||| |||| ||| ||||| ||||||||||| |||||||||| | ||||||||| | ||||||||||    
T  21220335 actacacagttaagcgtgtttgacttggagcaattttgggacgggtgacctactg-gaagtttccc 21220271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 3 - 178
Target Start/End: Original strand, 21067320 - 21067495
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    |||||||||||||||||||||||||| || |||| |||| ||||||||||| |||||||||| |||||||||||||| ||||||| ||||  | ||| ||    
T  21067320 gtatgagactgcatggttgaaggaagactaataataattatttggtactacatatatcaacaagatgcatcttctttccggtagctcattctaaaagtac 21067419  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcg 178  Q
    |||||||||| ||||||||||||||||| | | || ||| | |||||||||||  ||||||| |||||||| ||||    
T  21067420 tccacaattaagcgtgcttgacttggagtagtctttggaggggtgacctaccggaaagtttctcggtaagcgtgcg 21067495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 4127541 - 4127434
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  4127541 aggtatgggactacatagttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 4127442  T
Q  101 actccaca 108  Q
    ||||||||    
T  4127441 actccaca 4127434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 8467904 - 8467773
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |        |||    
T  8467904 aggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctataccaacaagatgcatcttcttttcggtagccc--------aga 8467813  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttggg 140  Q
    |||||||| ||| ||||||||||||||||| |||||||||    
T  8467812 actccacagttaagcgtgcttgacttggagcaattttggg 8467773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 13266122 - 13266272
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| || ||||||||||||||||||||||||| |||| ||| ||||| |||||||||| | |||||||||| ||||||||||| ||  ||| ||||    
T  13266122 aggtatgggaatgcatggttgaaggaaggcttataataattttttagtactccctatatcaataagatgcatcttattttcggtagcccaaatcacaaga 13266221  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacct 151  Q
    || ||||| ||| ||||||||||||| |||||||||| ||||| |||||||    
T  13266222 accccacagttaagcgtgcttgactttgagaaattttaggatgggtgacct 13266272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 14572254 - 14572086
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  |   |||||||    
T  14572254 aggtatgggactacatggttgaagggaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc-tttcggtagcctaaaccataaga 14572156  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagc 173  Q
    ||||||||   | ||||||||||||| ||| ||||||| |||| ||||||| | | |||||||| ||| ||||    
T  14572155 actccaca---aagcgtgcttgacttagagcaattttgagatgggtgaccttctgggaagtttctcggaaagc 14572086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 29628771 - 29628618
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||  |||| | || |||||| |||| |||||||    
T  29628771 aggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgtgtctt-tgtttggtagcccattccataaga 29628673  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccg 155  Q
    |||||||| ||| ||||| ||||||||||| | | || ||||| ||||| |||||    
T  29628672 actccacagttaagcgtgtttgacttggagtagtctttggatgggtgacttaccg 29628618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 53996216 - 53996090
Alignment:
Q  4 tatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaact 103  Q
    |||| |||| |||||||||||||| |||||||| ||||||||||||||||||||||||||| ||| ||||||||||| |||| | |||| ||||||||||    
T  53996216 tatgggactacatggttgaaggaatgcttataaaaattgtttggtactacctatatcaacaagattcatcttctttttggtatctcattccataagaact 53996117  T
Q  104 ccacaattacgcgtgcttgacttggag 130  Q
    ||||| ||| | |||||||||||||||    
T  53996116 ccacagttaagtgtgcttgacttggag 53996090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 17628560 - 17628697
Alignment:
Q  14 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattac 113  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||| ||   |||||||| |||||| ||      
T  17628560 catggttgaaggtaggcttataagaattgtttggtactacctataccaacaagatgcatcttcttttcgatagcccaacccataagaattccacagttga 17628659  T
Q  114 gcgtgcttgacttggagaaattttgggatgtgtgacct 151  Q
    |||||| |||||||||| ||||||| |||| |||||||    
T  17628660 gcgtgcctgacttggagcaattttgagatgggtgacct 17628697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 21067770 - 21067937
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||| ||   | |||| |||||  |||| |||||||    
T  21067770 aggtatgggactgcatggttgaaggaagacttataagaattgtttggtgctacctatatcaacaagataca---tttttttggtagtccattccataaga 21067866  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaa 171  Q
    ||| |||| ||| |||||||||||||| || | | || ||||| ||||||||||| ||||||| |||||||    
T  21067867 acttcacagttaagcgtgcttgacttgaagtagtctttggatgggtgacctaccgggaagtttaccggtaa 21067937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 14571825 - 14571702
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| |||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||  |   |||||||    
T  14571825 aggtatgggacttcatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagcctaaaccataaga 14571726  T
Q  101 actccacaattacgcgtgcttgac 124  Q
    |||||||| ||| |||||||||||    
T  14571725 actccacagttaagcgtgcttgac 14571702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 27026539 - 27026688
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| || | |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||| |||||| |||| |||||||    
T  27026539 aggtatgggactacacgattgaaggaaggcttataagaattgtttgatactacctatatcaacaagatgcatctt-tttttggtagcccattccataaga 27026637  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacct 151  Q
    ||| |  | ||| |||||||||||||| || |||||||||| | |||||||    
T  27026638 actacgtagttaagcgtgcttgacttgaagcaattttgggaagggtgacct 27026688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 27029317 - 27029434
Alignment:
Q  5 atgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactc 104  Q
    |||||||| || | |||||||||| |||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||| |||| |||||||||||    
T  27029317 atgagactacacgattgaaggaagacttataagaattatttggtactacttatatcaacaagatgcatcttcttttcggtagcccattccataagaactc 27029416  T
Q  105 cacaattacgcgtgcttg 122  Q
    |||| ||| | |||||||    
T  27029417 cacagttaagtgtgcttg 27029434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 14351833 - 14351956
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    ||||||| |||||||||||||||||||||| ||||| || |||||||||| ||||||||||| ||||||||||||||| |||| |  ||| |||||||||    
T  14351833 gtatgagtctgcatggttgaaggaaggcttgtaagagttttttggtactatctatatcaacaagatgcatcttctttttggtatcctattccataagaac 14351932  T
Q  103 tccacaattacgcgtgcttgactt 126  Q
    |||||| ||| ||||| |||||||    
T  14351933 tccacagttaagcgtgtttgactt 14351956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 33764898 - 33765044
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    |||| ||||| |||||||| | |||| ||| ||||||||||||||| ||||||||| ||||| |||||||||||||||  ||||| ||||| ||||||||    
T  33764898 gtataagactacatggttggatgaagacttttaagaattgtttggtgctacctataccaacaagatgcatcttcttttttgtagctcattttataagaac 33764997  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatgtgtgac 149  Q
    | |||| ||| |||||||||| |||||  |||||||||||| |||||    
T  33764998 ttcacacttaagcgtgcttgatttggatcaattttgggatgggtgac 33765044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 15306201 - 15306053
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattg------tttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttc 94  Q
    ||||||| |||| |||||| ||| |||| ||||||||| |||      ||||||||||||||||| |||| |||||||||||||||||||||| |||| |    
T  15306201 aggtatgggactacatggtcgaaagaagacttataagatttgagcaattttggtactacctatataaacaagatgcatcttcttttcggtagctcattcc 15306102  T
Q  95 ataagaactccacaattacgcgtgcttgacttggagaaattttgggatg 143  Q
    |||||||||||||| ||| ||||||||||||| ||| ||| ||||||||    
T  15306101 ataagaactccacagttaagcgtgcttgactttgagcaatcttgggatg 15306053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 43929067 - 43928927
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||||||||   |||| ||||||| ||||| ||||||||||||||||||| |||| ||||| ||||||||||||||| |||||   |||||||||||    
T  43929067 aggtatgagactatttggtcgaaggaaagcttacaagaattgtttggtactacatataccaacaagatgcatcttctttttggtag-ttatttcataaga 43928969  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggat 142  Q
    | ||||||||||  |||||||||||| ||| |||||||||||    
T  43928968 aatccacaattaaacgtgcttgactttgagcaattttgggat 43928927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 31817500 - 31817376
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    |||||||||| |||||||||||||| | |||||| ||||||||||||||||||||| |||||  ||||||||||||||| | ||| |||| | |||||||    
T  31817500 gtatgagacttcatggttgaaggaacgtttataataattgtttggtactacctataccaacaaaatgcatcttcttttccgcagcccattccttaagaac 31817401  T
Q  103 tccacaattacgcgtgcttgacttg 127  Q
    || ||||||| ||||| ||||||||    
T  31817400 tctacaattaagcgtgtttgacttg 31817376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 143
Target Start/End: Original strand, 41869957 - 41870096
Alignment:
Q  4 tatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaact 103  Q
    |||| ||||||||| |||||||||| |||||||||||||| || ||||||||||||||||| || ||||||||||||| ||| | ||  |||||||||||    
T  41869957 tatgggactgcatgattgaaggaagacttataagaattgtatgatactacctatatcaacaagacgcatcttcttttcagtaacccaaatcataagaact 41870056  T
Q  104 ccacaattacgcgtgcttgacttggagaaattttgggatg 143  Q
     |||||||| || || ||||| | ||| ||||||||||||    
T  41870057 tcacaattatgcatgtttgacatagagcaattttgggatg 41870096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 27578561 - 27578419
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||| ||||||||  |||||||| || || ||||||||||| |||||| ||||||||||||||| |||||||||||||||||||| | ||   |||||||    
T  27578561 aggtgtgagactgtgtggttgaatgatggtttataagaattatttggtgctacctatatcaacaagatgcatcttcttttcggtatcccaaaccataaga 27578462  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatg 143  Q
    |||||| | ||| ||||||||||||| ||  ||||||||||||    
T  27578461 actccatagttaagcgtgcttgacttcgaacaattttgggatg 27578419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 4185751 - 4185901
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||||||| |||||||| ||||||  | ||||||||||||||| ||| || |||| ||||| ||||||||||||||| |||||| ||||  | ||||    
T  4185751 aggtatgagacggcatggttaaaggaatacatataagaattgtttgataccacatataccaacaagatgcatcttctttttggtagctcattctacaaga 4185850  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacct 151  Q
    |||| ||| ||| |  |||||||||||||| |||||||||||  |||||||    
T  4185851 actctacagttaagtatgcttgacttggagcaattttgggataggtgacct 4185901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 137
Target Start/End: Complemental strand, 20306241 - 20306132
Alignment:
Q  25 gaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgac 124  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||   |||||| |||| | ||||||||||||||| |||  ||| |||||||||||    
T  20306241 gaaggcttataagaattgtttggtactatctatatcaacaagatgca---tctttttggtatcccatttcataagaactacacggttaagcgtgcttgac 20306145  T
Q  125 ttggagaaatttt 137  Q
    |||||| ||||||    
T  20306144 ttggagcaatttt 20306132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 27579013 - 27578831
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||| ||| | |||||||  |||| |||||||||||||||||||||||| ||||||||   ||  |||||||||||| ||||| |  | |||||||    
T  27579013 aggtatgacactacttggttgactgaagacttataagaattgtttggtactacatatatcaattagacacatcttcttttcagtagccctatccataaga 27578914  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    ||| |||| ||| |||||||| ||||||||  ||||||||||| ||||||| | | |||||||||| | |||| |||| ||||    
T  27578913 actacacagttaagcgtgcttaacttggagcgattttgggatgcgtgaccttctgggaagtttcccagaaagcgtgcgagtga 27578831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 13613997 - 13613874
Alignment:
Q  5 atgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactc 104  Q
    |||||||| |||||| ||||||   ||||||||||||||||| ||| ||||||||||||| ||||||||||| |||||||||  ||||  ||||||||||    
T  13613997 atgagactccatggtagaaggagtacttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagttcattctataagaactc 13613899  T
Q  105 cacaattacgcgtgcttgacttgga 129  Q
    |||| ||| ||||| ||||||||||    
T  13613898 cacagttaagcgtgtttgacttgga 13613874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 17029368 - 17029531
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    ||||| |||||||| |||||| |||| ||| ||| |||||||| |||||||||||||||||| ||||||| ||  ||| |||| |  ||| |||||||||    
T  17029368 gtatgggactgcatagttgaatgaagacttgtaataattgtttagtactacctatatcaacaagatgcatattacttttggtaccttattccataagaac 17029467  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttccc 166  Q
    |||||| ||| | |||||| |||||||| | ||||||| || ||||||| | | ||||||||||    
T  17029468 tccacagttaagagtgcttaacttggagcatttttgggttgggtgaccttctgggaagtttccc 17029531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 23976323 - 23976175
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttc-ttttcggtagcacatttcataag 99  Q
    ||||||| | ||||||| ||||||||||  ||||||||||||||||||||||||||||  |||| ||||||||||| ||||   ||||  |  ||||||     
T  23976323 aggtatgggtctgcatgattgaaggaagagttataagaattgtttggtactacctatactaacaagatgcatcttcttttttcatagccaaaatcataaa 23976224  T
Q  100 aactccacaattacgcgtgcttgacttggagaaattttgggatgtgtga 148  Q
    ||||||||| |||  |||||||||||||||  |||||||||||| ||||    
T  23976223 aactccacagttaaacgtgcttgacttggaataattttgggatgagtga 23976175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 23091590 - 23091468
Alignment:
Q  26 aaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgact 125  Q
    ||||| ||||| |||||||||||||||| ||||| |||| ||||||||||||||  ||||||  |||  |||| ||||||||| ||| || |||||||||    
T  23091590 aaggcgtataaaaattgtttggtactacatatattaacaagatgcatcttctttctggtagcttattctataaaaactccacagttaagcatgcttgact 23091491  T
Q  126 tggagaaattttgggatgtgtga 148  Q
    || || |||||||||||| ||||    
T  23091490 tgtagcaattttgggatgggtga 23091468  T

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Target: chr4; HSP #49
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 44831035 - 44831140
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    |||||||| | |||||||||||| | |||||||| ||||||||||||||||||| |  |||| |||| || |||||||||||||| ||||||||| ||||    
T  44831035 gtatgagattacatggttgaagggaagcttataaaaattgtttggtactacctaaactaacaagatgtatattcttttcggtagcccatttcatatgaac 44831134  T
Q  103 tccaca 108  Q
    | ||||    
T  44831135 ttcaca 44831140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 4186205 - 4186310
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    ||||||||||  ||| || |||||| ||||||||||||  |||||||||||||| || |||| ||| ||||||||||| |||||| |||| |||||||||    
T  4186205 gtatgagactaaatgtttaaaggaatgcttataagaatgatttggtactacctacatgaacaagattcatcttctttttggtagcccattgcataagaac 4186304  T
Q  103 tccaca 108  Q
    | ||||    
T  4186305 tacaca 4186310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 143
Target Start/End: Original strand, 17028912 - 17029052
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    ||||| |||||||| ||||||||| |  || ||||||||||| ||| ||||||||||||||| ||||| |||| ||||   ||||  ||| |||||||||    
T  17028912 gtatgggactgcatagttgaaggaggatttgtaagaattgttaggtgctacctatatcaacaagatgcgtcttattttacctagcttattccataagaac 17029011  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatg 143  Q
    | || | ||| | ||||||||||||||| ||||| ||||||    
T  17029012 ttcatagttaagagtgcttgacttggagcaatttcgggatg 17029052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 53391925 - 53392008
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtag 86  Q
    |||||||||||||||||||||| || |||||||| ||||||||| ||| | ||||||||||| ||| ||| || ||||||||||    
T  53391925 gtatgagactgcatggttgaagaaatgcttataaaaattgtttgataccatctatatcaacaagatacatatttttttcggtag 53392008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 24271654 - 24271505
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| ||||||| ||| ||| | |||||||||| |||| |||||||||||  |||| ||||||| || |||| |||||| |||| |||||||    
T  24271654 aggtatgagactacatggttaaagtaagacatataagaattatttgatactacctatacgaacaagatgcatatt-ttttgggtagcccattccataaga 24271556  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacct 151  Q
    ||||  ||| ||  | ||||||| || ||  |||||||||||| |||||||    
T  24271555 actctgcaaataaacatgcttgagttagaacaattttgggatgcgtgacct 24271505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 53854911 - 53854858
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacc 54  Q
    ||||||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  53854911 aggtatgagactatatggttgaaggaagacttataagaattgtttggtactacc 53854858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 42838661 - 42838733
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatctt 75  Q
    |||||||||| ||| ||| ||||||| | ||||| |||||||||||||||||||||||||||  |||||||||    
T  42838661 gtatgagactacatagttcaaggaagacgtataaaaattgtttggtactacctatatcaacaaaatgcatctt 42838733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 17629004 - 17629145
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| || || |||||||||  ||  |||||||||||||||||||||||||||||  || | ||||| |||||||||  | ||| || | || ||||    
T  17629004 aggtatgtgaatgtatggttgaataaaaacttataagaattgtttggtactacctatactaataagatgcctcttctttttagaagcccaatccaaaaga 17629103  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatg 143  Q
    | ||||| |||| || |||||||||||||| ||||||| ||||    
T  17629104 attccac-attaagcatgcttgacttggagcaattttgagatg 17629145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 34554483 - 34554605
Alignment:
Q  19 ttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtg 118  Q
    ||||| ||| ||||||||||||||||||  |||||||||| || || ||||||| || |||| |||||  |||| |||||||||| || | |||  | ||    
T  34554483 ttgaaagaatgcttataagaattgtttgacactacctataccagcaagatgcattttatttttggtagaccattccataagaacttcatagttaaacatg 34554582  T
Q  119 cttgacttggagaaattttggga 141  Q
     ||||||| ||||||||||||||    
T  34554583 tttgacttagagaaattttggga 34554605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 39902518 - 39902471
Alignment:
Q  40 ttgtttggtactacctatatcaacatgatgcatcttcttttcggtagc 87  Q
    ||||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  39902518 ttgtttggtactatctatatcaacaagatgcatcttcttttcgatagc 39902471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 11828509 - 11828439
Alignment:
Q  81 cggtagcacatttcataagaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacct 151  Q
    ||||||| | || ||||||||||||||| ||| |||||||| |||||||| | |||||||||| |||||||    
T  11828509 cggtagctccttccataagaactccacagttaagcgtgctttacttggagcatttttgggatgggtgacct 11828439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 17506423 - 17506485
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacat 65  Q
    |||||||| |||||| || || |||| |||||||||||||| | |||||||||||||||||||    
T  17506423 gtatgagagtgcatgattaaaagaagacttataagaattgtatagtactacctatatcaacat 17506485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 206
Target Start/End: Original strand, 50399272 - 50399361
Alignment:
Q  114 gcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtgaaaagactcgtgttggtttatagg 206  Q
    |||||| |||||||||| | | ||  |||| ||||||||| | ||||||||||||||||| |||   ||||||||||||||||||||| ||||    
T  50399272 gcgtgcctgacttggagtattcttatgatgggtgacctactgggaagtttcccggtaagcgtgc---tgaaaagactcgtgttggtttgtagg 50399361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 27578296 - 27578240
Alignment:
Q  95 ataagaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacct 151  Q
    ||||||||| |||| ||| ||||||||||||||||| | |||||||||| |||||||    
T  27578296 ataagaacttcacagttaagcgtgcttgacttggagcagttttgggatgagtgacct 27578240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 45682242 - 45682318
Alignment:
Q  4 tatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttctttt 80  Q
    |||| |||| |||| ||||| ||||| ||||||||||| ||||||| || ||||| ||||| ||||||| |||||||    
T  45682242 tatgggactacatgattgaatgaaggtttataagaattatttggtattatctataccaacaagatgcattttctttt 45682318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 2499698 - 2499647
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtacta 52  Q
    |||||||||||| ||||||||||| ||  ||||||| |||||||||||||||    
T  2499698 aggtatgagacttcatggttgaagcaacacttataaaaattgtttggtacta 2499647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 52048770 - 52048695
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttc 76  Q
    |||||||| ||||||| | ||||||||   |||||||||||||||| |||||| ||||  |||| |||||||||||    
T  52048770 aggtatgaaactgcatagctgaaggaaaatttataagaattgtttgatactacgtatactaacaagatgcatcttc 52048695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 136
Target Start/End: Complemental strand, 14571699 - 14571657
Alignment:
Q  94 cataagaactccacaattacgcgtgcttgacttggagaaattt 136  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||    
T  14571699 cataagaactccacagttaagcgtgcttgacttggagcaattt 14571657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 4127399 - 4127350
Alignment:
Q  124 cttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagc 173  Q
    ||||||| |||||||||||| |||| ||| || |||||||||||||||||    
T  4127399 cttggagcaattttgggatgggtgagctatcgggaagtttcccggtaagc 4127350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 26200391 - 26200311
Alignment:
Q  1 aggtatgagactgcatggttgaagga--aggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttt 79  Q
    ||||||| |||  |||||||||||||  |||||||||| ||||||||| ||||| |||||  |||| ||||||| ||||||    
T  26200391 aggtatgggacatcatggttgaaggaagaggcttataacaattgtttgatactaactatacaaacaagatgcatattcttt 26200311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 33987139 - 33987103
Alignment:
Q  9 gactgcatggttgaaggaaggcttataagaattgttt 45  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  33987139 gactgcattgtttaaggaaggcttataagaattgttt 33987103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 135; Significance: 2e-70; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 33771037 - 33771219
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  33771037 aggtatgggactgcagggttgaagaaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataaga 33771136  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| || |||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||| ||||    
T  33771137 actccacagttaagcatgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcatgcgagtga 33771219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 25338107 - 25337936
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  25338107 aggtatgggactgcatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcgatagctcatttcataaga 25338008  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaag 172  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  25338007 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaag 25337936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 30966270 - 30966452
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||| |||||||    
T  30966270 aggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtatctcattccataaga 30966369  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||| | ||| ||||||||||||||||  |||||||||||| ||||||||||| |||||||| ||||||||||||| ||||    
T  30966370 actccatagttaagcgtgcttgacttggaccaattttgggatgggtgacctaccgggaagtttctcggtaagcatgcgagtga 30966452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 41754325 - 41754495
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||| |||||||    
T  41754325 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactatctatatcaacaagatgcatcttcttttcggtagctcattccataaga 41754424  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaa 171  Q
    |||||||| ||| ||||||||||||||||| ||||||||||||  ||||||||||  ||||||||||||||    
T  41754425 actccacagttaagcgtgcttgacttggagcaattttgggatggatgacctaccggaaagtttcccggtaa 41754495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 30966728 - 30966908
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||    
T  30966728 gtatgggactgcatggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaac 30966827  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||| ||| |||||||| |||||||| |||||||||||| ||||||||||| |||||||| |||||||| |||| ||||    
T  30966828 tccacagttaagcgtgcttaacttggagcaattttgggatgggtgacctaccgggaagtttctcggtaagcgtgcgagtga 30966908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 29259728 - 29259548
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    ||||| |||||||||||||||||||||||||| | |||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||    
T  29259728 gtatgggactgcatggttgaaggaaggcttattaaaattgtttggtactacatatatcaacaagatgcatcttcttttcggtagctcatttcataagaac 29259629  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    | || | ||| ||||||||||||| ||| |||||||||||| ||||||||||| |||||||||||||||||||||| ||||    
T  29259628 ttcatagttaagcgtgcttgactttgagcaattttgggatgggtgacctaccgggaagtttcccggtaagcatgcgagtga 29259548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 8256562 - 8256744
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  8256562 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 8256661  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||| | | ||||||| ||| ||||| |||| ||||    
T  8256662 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctgctgggaagttttccgataagcgtgcgagtga 8256744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 24818364 - 24818543
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    ||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||| |||||||||    
T  24818364 gtatgggactgcatggttcaaggaaggcttataagaattgtttagtactacctatatcaacaagatgcatctttttttcggtagctcattccataagaac 24818463  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||| ||| ||||||||||||||||| |||||| ||||| ||||||||||| ||||||||| ||||||| |||| ||||    
T  24818464 tccacagttaagcgtgcttgacttggagcaatttt-ggatgggtgacctaccgggaagtttcctggtaagcgtgcgagtga 24818543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 16379429 - 16379611
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||    
T  16379429 aggtatgggactgcatggttgaaggaagacttatacgaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcacattccataaga 16379528  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||| ||||||||||| ||| || ||||| ||||||||||| |||||||| | |||||| |||| ||||    
T  16379529 actccacagttaagcgtgtttgacttggagtaatctttggatgggtgacctaccgggaagtttcactgtaagcgtgcgagtga 16379611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 15 - 183
Target Start/End: Complemental strand, 5399913 - 5399745
Alignment:
Q  15 atggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacg 114  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||| || | ||| |    
T  5399913 atggtttaagggaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacttcatagttaag 5399814  T
Q  115 cgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    ||||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||||| |||| ||||    
T  5399813 cgtgcttgacttggagaaattttgggatgggtgacctaccaggaagttttccggtaagcgtgcgagtga 5399745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 16378975 - 16379155
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    |||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||    
T  16378975 gtatgagactgcatggttgaaggaagtcttatacgaattgtttgatactacctatatcaacaagatgcatcttctttttggtagcacattccataagaac 16379074  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||| ||| ||||||||||||||||| | | || ||||| |||||||| || ||||||||| ||||||| |||| ||||    
T  16379075 tccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctatcgggaagtttccgggtaagcgtgcgagtga 16379155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 11388224 - 11388375
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| |||||||||||||| ||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  11388224 aggtatgagactacatggttgaaggaatgcttaaaa-aattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 11388322  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctac 153  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| |||||||||    
T  11388323 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctac 11388375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 29804718 - 29804870
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| |||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  29804718 aggtatgggactacatggttgaaggcaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 29804817  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctac 153  Q
    |||||||| ||| |||||||||||||| || ||||||||||||| ||||||||    
T  29804818 actccacagttaagcgtgcttgacttgaagcaattttgggatgtttgacctac 29804870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 1707077 - 1707260
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||| ||||||||    
T  1707077 aggtatgagactacatgattgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccatctcataaga 1707176  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtgaa 184  Q
    |||||||| ||| | ||| |||||||| || | | || ||||| ||||||||||  ||||||||||||||||| |||| |||||    
T  1707177 actccacagttaagagtgtttgacttgaagtagtctttggatgggtgacctaccaggaagtttcccggtaagcgtgcgagtgaa 1707260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 33174994 - 33175174
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||    
T  33174994 aggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcatttcataaga 33175093  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||| ||||||||||| | | ||  |||| ||||||||||| |||  |||||||||||| |||| ||||    
T  33175094 actccacagttaagcgtg-ttgacttggagtattcttatgatgggtgacctaccgggaa-attcccggtaagcgtgcgagtga 33175174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 11394571 - 11394721
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| |||||||||||||| ||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||  ||| |||||||    
T  11394571 aggtatgagactacatggttgaaggaatgcttaaaa-aattgtttggtactacctatatcaacaagatgcatcttcttttcggtagc-tattccataaga 11394668  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctac 153  Q
    ||| |||| ||| ||||||||||||||||| |||||||||||| |||||||||    
T  11394669 acttcacagttaagcgtgcttgacttggagcaattttgggatgggtgacctac 11394721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 1912561 - 1912742
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| |||||||||| | ||  |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||| |||||||    
T  1912561 aggtatgagactacatggttgaaagtagatttataagaattgtttggtactacctatatcaacaagatgcatcttctttt-ggtagcccattccataaga 1912659  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||| ||||||||||| | | || ||||| || |||||||| |||||||| |||||||| |||| ||||    
T  1912660 actccacagttaagcgtgattgacttggagtactctttggatgggttacctaccgggaagtttctcggtaagcgtgcgagtga 1912742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 15619936 - 15620116
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    |||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||| ||| ||||||||||| || | | || | |||||||||    
T  15619936 gtatgagactgcatagttgaaggcaagcttataagaattgtttggtactacctatatcaacaagatacatcttctttttggaaacccaatccataagaac 15620035  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||||| ||||||||||||| ||| | | || ||||| ||||||||| | |||||||| |||||||| |||| ||||    
T  15620036 tccacaattaagcgtgcttgactttgagtagtctttggatgggtgacctactgggaagtttctcggtaagcgtgcgagtga 15620116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 33174556 - 33174668
Alignment:
Q  18 gttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||| || ||| ||||    
T  33174556 gttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcccattccataagaactccgcagttaagcgt 33174655  T
Q  118 gcttgacttggag 130  Q
    |||||||||||||    
T  33174656 gcttgacttggag 33174668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 38899022 - 38898868
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||| ||||| |||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||| ||||||||||||||    
T  38899022 aggtatcagactacatggttgaaggagagcttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtaacacatttcataaga 38898923  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccg 155  Q
    |||||||| ||| ||||||||||||| ||| | | || ||||  |||||||||||    
T  38898922 actccacagttaagcgtgcttgacttagagtagtctttggataggtgacctaccg 38898868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 12 - 151
Target Start/End: Complemental strand, 30963362 - 30963223
Alignment:
Q  12 tgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaatt 111  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||| |||||| ||  ||||||||| || ||| ||    
T  30963362 tgcatgattgaaggaaggcttataagaattgttaggtactacctatatcaacaagatgcatcttatttttggtagcccaaatcataagaattcaacagtt 30963263  T
Q  112 acgcgtgcttgacttggagaaattttgggatgtgtgacct 151  Q
    | ||||||||||||||||| |||||||||||| |||||||    
T  30963262 aagcgtgcttgacttggagcaattttgggatgagtgacct 30963223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 13191010 - 13191160
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||| ||||||||||||| ||||||| |||||||||||||||||||||||| |||| ||||| ||||||||||||||| |||||  ||||| ||||||    
T  13191010 aggtataagactgcatggttcaaggaagacttataagaattgtttggtactacatataccaacaagatgcatcttctttttggtagtccattttataaga 13191109  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacct 151  Q
    |||||| | ||| | |||||||||||| |||||||||| |||  |||||||    
T  13191110 actccatagttatgtgtgcttgacttgaagaaattttgagataggtgacct 13191160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 18098988 - 18098883
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||| |||||||    
T  18098988 aggtatgagactacatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcattccataaga 18098889  T
Q  101 actcca 106  Q
    ||||||    
T  18098888 actcca 18098883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 172
Target Start/End: Complemental strand, 27883034 - 27882865
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||| || ||||||||| | |||||||||||||||  ||||  | || |||||||||    
T  27883034 gtatgagactgcattgttgaaggaatgcttataagaattgtttggtattatctatatcaataagatgcatcttcttttttgtaggccgttccataagaac 27882935  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaag 172  Q
    |||||||||| ||||| ||||||||||| | | || ||||  ||||||||| |||||||||  |||||||    
T  27882934 tccacaattaagcgtgtttgacttggagtagtctttggataggtgacctactgagaagtttttcggtaag 27882865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 25434165 - 25434037
Alignment:
Q  2 ggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaa 101  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||| |||| |||||||| ||||||||| ||||  |||||| |||| ||||||||    
T  25434165 ggtatgggacttcatggttgaaggaaggcttataagaattgtttgatacaacctttatcaacaagatgcatctcctttctggtagcccattccataagaa 25434066  T
Q  102 ctccacaattacgcgtgcttgacttggag 130  Q
    ||||||| ||| |||||||||||||||||    
T  25434065 ctccacagttaagcgtgcttgacttggag 25434037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 83053 - 83203
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| |||||||||||| | |||||||||||| ||||||||||||||||| ||||| |||| ||||| |||| |||||| |||| |||||||    
T  83053 aggtatgagactacatggttgaaggtatgcttataagaatcgtttggtactacctataccaacaagatgaatcttttttttggtagctcattccataaga 83152  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacct 151  Q
    |||| ||| ||| ||||| |||| |||||  ||||||| ||| ||||||||    
T  83153 actctacagttaagcgtgtttgatttggaacaattttgtgatatgtgacct 83203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 20502061 - 20502169
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||| |||| |||| |||||| ||||||||||||||    
T  20502061 gtatgggactgcatggttgaaggaaggcttataagaattgtttggtactttctatatcaacaagatgcttctt-tttttggtagcccatttcataagaac 20502159  T
Q  103 tccacaatta 112  Q
    | ||||||||    
T  20502160 ttcacaatta 20502169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 15639781 - 15639952
Alignment:
Q  12 tgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaatt 111  Q
    ||||| |||||||| | ||||||| ||||||||||||||||||||||||||||  || ||||||||||| || | | || | || |||||||||||||||    
T  15639781 tgcatagttgaaggcacgcttataggaattgtttggtactacctatatcaacaacatacatcttctttttggaaacccaatccacaagaactccacaatt 15639880  T
Q  112 acgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    | ||||||||||||||||| | | || ||||| ||||||||| | |||||||| || ||||| |||| ||||    
T  15639881 aagcgtgcttgacttggagtagtctttggatgggtgacctactgggaagtttctcgataagcgtgcgagtga 15639952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 17 - 151
Target Start/End: Original strand, 8073944 - 8074078
Alignment:
Q  17 ggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcg 116  Q
    ||||||||| || ||||||||||||||||||||||||||||| ||||| ||||||||||||||   ||||| |||||||||||||||||| |  || ||     
T  8073944 ggttgaagggagacttataagaattgtttggtactacctataccaacaagatgcatcttctttcttgtagcccatttcataagaactccatagataagcc 8074043  T
Q  117 tgcttgacttggagaaattttgggatgtgtgacct 151  Q
    | ||||||||||  ||||||||||||| |||||||    
T  8074044 ttcttgacttggttaaattttgggatgagtgacct 8074078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 30963830 - 30963680
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||| |||| ||||||||||||||||  |||||||||||||| |||| ||||||||||||||| ||||||||||||||  |||||| ||   ||||| |    
T  30963830 aggtaagagaatgcatggttgaaggaaaacttataagaattgtatggttctacctatatcaacaagatgcatcttctttctggtagcccaaaccataata 30963731  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacct 151  Q
    |||||||| ||| ||||||||||||||| | | |||||||||  |||||||    
T  30963730 actccacagttaagcgtgcttgacttggcggagttttgggataggtgacct 30963680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 1953191 - 1953276
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtag 86  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  1953191 aggtatgagactgcatggttgaaggaagacctataagaattgtttggtactacctatatcaactagatgcatcttctttttggtag 1953276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 22 - 151
Target Start/End: Complemental strand, 30961972 - 30961843
Alignment:
Q  22 aaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgctt 121  Q
    ||||||| ||||||||| ||| ||||||||||||||||||||| ||||||| || |||||||||||  |   ||||||||||||||| |||  |||||||    
T  30961972 aaggaagtcttataagatttgattggtactacctatatcaacaagatgcatatttttttcggtagccgaaaccataagaactccacagttaaacgtgctt 30961873  T
Q  122 gacttggagaaattttgggatgtgtgacct 151  Q
    ||||| ||| |||||||||||| |||||||    
T  30961872 gacttagagcaattttgggatgggtgacct 30961843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 71 - 183
Target Start/End: Complemental strand, 32377756 - 32377644
Alignment:
Q  71 atcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggta 170  Q
    ||||| ||||||||||| |||| || |||||||||||| ||| || |||||||||||||| |||||||||||  |||||||||||  |||||| ||||||    
T  32377756 atcttgttttcggtagctcattccaaaagaactccacagttaagcatgcttgacttggagcaattttgggataggtgacctaccggaaagttttccggta 32377657  T
Q  171 agcatgcgtgtga 183  Q
    ||| |||| ||||    
T  32377656 agcgtgcgagtga 32377644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 18448028 - 18447954
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatctt 75  Q
    ||||||| |||| ||||||||||| ||| |||||||||||||||||||||||| | |||||||| ||||||||||    
T  18448028 aggtatgtgactacatggttgaagtaagacttataagaattgtttggtactacttgtatcaacaagatgcatctt 18447954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 16542021 - 16542164
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcgg-tagcacatttcataag 99  Q
    ||||||||  || ||||||||||||||| ||||||| |||||||| |||||||||||||||||| |||| ||||| ||||    |||| |||| |||||     
T  16542021 aggtatgactctacatggttgaaggaagacttataataattgttttgtactacctatatcaacaagatgtatcttttttttttatagctcattccataaa 16542120  T
Q  100 aactccacaattacgcgtgcttgacttggagaaattttgggatg 143  Q
    ||||| ||| |||   ||| ||||||||||| |||||| |||||    
T  16542121 aactctacagttaaatgtgtttgacttggagcaattttaggatg 16542164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 36924519 - 36924453
Alignment:
Q  16 tggttgaaggaaggcttataagaattgtttggtactac--ctatatcaacatgatgcatcttctttt 80  Q
    |||||||||||||||||||||||||||||||||| |||   |||||||||| |||||||||||||||    
T  36924519 tggttgaaggaaggcttataagaattgtttggtattacttatatatcaacaagatgcatcttctttt 36924453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 183
Target Start/End: Complemental strand, 32377921 - 32377835
Alignment:
Q  97 aagaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||||||| ||| ||||| ||||||||||| |||||||||||| |||| |||| | ||||||| ||||||||| |||| ||||    
T  32377921 aagaactccacagttaagcgtgtttgacttggagcaattttgggatgggtgatctactgggaagttttccggtaagcgtgcgagtga 32377835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 8181446 - 8181398
Alignment:
Q  16 tggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 64  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  8181446 tggttgaaggaagacttttaagaattgtttggtactacctatatcaaca 8181398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 37552632 - 37552726
Alignment:
Q  30 cttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgactt 126  Q
    |||||||||||||||||||||||| |||| ||| ||||||| ||||||||| || ||| |||| | |||||| |||||| ||| || ||||||||||    
T  37552632 cttataagaattgtttggtactacatata-caaaatgatgc-tcttctttttggcagcgcattccgtaagaattccacagttaagcatgcttgactt 37552726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 9909130 - 9909214
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagc 87  Q
    ||||||||||  |||||||||||| || ||||||  |||  ||||||||||||||| ||||| ||| || |||||||| ||||||    
T  9909130 gtatgagactatatggttgaaggagggtttataatgattaattggtactacctataccaacaagattcaacttctttttggtagc 9909214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 26864905 - 26864851
Alignment:
Q  22 aaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttc 76  Q
    ||||||||||| |||||| | |||||||||||||| ||| ||| |||||||||||    
T  26864905 aaggaaggcttgtaagaactctttggtactacctacatcgacaagatgcatcttc 26864851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 105756 - 105938
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||| |||||||    
T  105756 aggtatggaactgcagggttgaaggaaggcttataagaattgtttggtactacctatatcaacaaaatgcatcttcttttcggtagctcattccataaga 105855  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| ||||    
T  105856 actccacagttaagcgtgcttgacttggagcaattttgggatgtgtgacctaccgagaagtttcctggtaagcgtgcgagtga 105938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 131; Significance: 4e-68; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 28561782 - 28561963
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  28561782 aggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 28561881  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||| | ||||||||||||||||| |||| ||||    
T  28561882 actccacagttaagcgtgcttgacttggagcaattttgggatg-gtgacctacggggaagtttcccggtaagcgtgcgagtga 28561963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 11180144 - 11179973
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  11180144 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataaga 11180045  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaag 172  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||| || |||||||||||||    
T  11180044 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggatgtttcccggtaag 11179973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 8 - 172
Target Start/End: Complemental strand, 13150657 - 13150493
Alignment:
Q  8 agactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccac 107  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||    
T  13150657 agactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccac 13150558  T
Q  108 aattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaag 172  Q
    | ||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  13150557 agttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaag 13150493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 32227331 - 32227160
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||| |||||| ||||||||||||    
T  32227331 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatattaacaagatgcatcttctttttggtagctcatttcataaga 32227232  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaag 172  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  32227231 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaag 32227160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 32227536 - 32227707
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  32227536 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatattaacaagatgcatcttcttttcggtagctcatttcataaga 32227635  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaag 172  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||||||| ||||    
T  32227636 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccgataag 32227707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 31284386 - 31284224
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  31284386 aggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 31284287  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagttt 163  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||| ||| |||||||    
T  31284286 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctgccgggaagttt 31284224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 3 - 172
Target Start/End: Original strand, 50347784 - 50347953
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    |||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||| |||| |||||||||    
T  50347784 gtatgagactacttggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttctttttggtagctcattccataagaac 50347883  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaag 172  Q
    |||||| ||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||    
T  50347884 tccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgagaagtttcccgataag 50347953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 14813985 - 14814168
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||| | || |||||||    
T  14813985 aggtatgagactgcatggttaaaggaaggcttataataattgtttggtactacctatatcaataagatgcatcttcttttcggtagctcgttccataaga 14814084  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtgaa 184  Q
    |||||||| ||| ||||||||||||||||| ||||||| |||| |||||||||||| | |||||||||||||| |||| |||||    
T  14814085 actccacagttaagcgtgcttgacttggagcaattttgtgatgggtgacctaccgaaaggtttcccggtaagcgtgcgagtgaa 14814168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 16811425 - 16811599
Alignment:
Q  9 gactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccaca 108  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||| |||| |||||||| ||||||    
T  16811425 gactccatggttgaaggaaggcttataagaattgttgggtactacctatttcaacaagatgcatcttcttttcggtagctcattccataagaattccaca 16811524  T
Q  109 attacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
     ||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||||||| |||||||||| ||||    
T  16811525 gttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccgataagcatgcgagtga 16811599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 27187438 - 27187258
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    ||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||| ||||||||||||||    
T  27187438 gtatgggactgcatggttaaatgaaggcttataagaattgtttggtactacctatatcactaagatgcatcttcttttcggtagctcatttcataagaac 27187339  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||| ||| ||||||||||||| ||| |||||||||||| ||||||||||| ||||||||||| ||||| |||| ||||    
T  27187338 tccacagttaagcgtgcttgactttgagcaattttgggatgggtgacctaccgggaagtttcccgataagcgtgcgagtga 27187258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 39653200 - 39653371
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||||||||||||||| |||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||| |||| ||| |||    
T  39653200 aggtatgggactgcatggttgaaggaaagcttataagaattgttggatactacctatatcaacaagatgcatcttcttttcggtagctcattccatgaga 39653299  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaag 172  Q
    |||||||| ||| | ||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  39653300 actccacagttaagtgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaag 39653371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 13150209 - 13150038
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| ||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||| ||||| |||| |||||||    
T  13150209 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcatcttcttttcagtagctcattccataaga 13150110  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaag 172  Q
    |||||||| ||| ||||||||||||||||| |||||||| ||| ||||||||||| |||||||| |||||||    
T  13150109 actccacagttaagcgtgcttgacttggagcaattttggaatgggtgacctaccgggaagtttctcggtaag 13150038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 8067316 - 8067498
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| || ||||||||||||||  |||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||| |||||||    
T  8067316 aggtatgggattgcatggttgaaggccggcttataagaattgtttagtactacctatatcaacaagatgcatctttttttcggtagctcattccataaga 8067415  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||| | ||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||||||| ||||| |||| ||||    
T  8067416 actccatagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccgataagcgtgcgagtga 8067498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 20885227 - 20885055
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||  |||||||||| |||||||    
T  20885227 aggtatgtgactacatggttgaaggaagacttataagaattgtttgatactacctatatcaacaagatgcatcttctttttagtagcacattccataaga 20885128  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagc 173  Q
    |||||||||||| ||||||||||||||||| | | || ||||| ||||||||||| ||| ||||||| |||||    
T  20885127 actccacaattaagcgtgcttgacttggagtagtatttggatgggtgacctaccgggaaatttcccgttaagc 20885055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 32386844 - 32386672
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||  ||| |||||||    
T  32386844 aggtatgggactgtatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttcttttcagtagctaattccataaga 32386745  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagc 173  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| |||||| ||||  |||||||  |||||||    
T  32386744 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacccaccggaaagtttcttggtaagc 32386672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 25230815 - 25230633
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| |||| |||||||    
T  25230815 aggtatgagactacatggttgaaggaaggtttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataaga 25230716  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||| ||||||| ||||||||||||||||| | | ||  |||| ||| ||||| | ||||||||||||||||| |||| ||||    
T  25230715 actcaacaattaagcgtgcttgacttggagtagtcttatgatgggtgccctactgggaagtttcccggtaagcgtgcgagtga 25230633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 25238402 - 25238220
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| |||| |||||||    
T  25238402 aggtatgagactacatggttgaaggaaggtttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataaga 25238303  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||| ||||||| ||||||||||||||||| | | ||  |||| ||| ||||| | ||||||||||||||||| |||| ||||    
T  25238302 actcaacaattaagcgtgcttgacttggagtagtcttatgatgggtgccctactgggaagtttcccggtaagcgtgcgagtga 25238220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 29224363 - 29224520
Alignment:
Q  4 tatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaact 103  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||| |||||||||||||||||||||| ||   ||||||||||    
T  29224363 tatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatactaacaagatgcatcttcttttcggtagcccaaaccataagaact 29224462  T
Q  104 ccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagt 161  Q
     |||||||| ||||||||||||||||| |||||||||||| ||||||| | |||||||    
T  29224463 tcacaattaagcgtgcttgacttggagcaattttgggatgggtgaccttctgagaagt 29224520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 14820190 - 14820366
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| | ||||| || | |||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||| | || |||||||    
T  14820190 aggtatggggctgcacggctaaaggaaggcttataagaattgtttggtactacttatatcaacaagatgcatcttattttcggtagctcgttccataaga 14820289  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgc 177  Q
    |||||||| ||| ||||||||||||||||  |||||||||||| |||||||| ||  ||||||||||||||||||||    
T  14820290 actccacagttaagcgtgcttgacttggaacaattttgggatgggtgacctatcggaaagtttcccggtaagcatgc 14820366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 4 - 183
Target Start/End: Original strand, 16810964 - 16811143
Alignment:
Q  4 tatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaact 103  Q
    |||| |||||||||||||| |||||||||||||||||||||  |||||| ||||||| ||| |||||||||||||||||||||| |||| ||||||||||    
T  16810964 tatgggactgcatggttgatggaaggcttataagaattgttgcgtactaactatatctacaagatgcatcttcttttcggtagctcattccataagaact 16811063  T
Q  104 ccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
     |||| ||| | |||||||||||| || |||||||||||| ||||||||||| |||||||||| |||||| |||| ||||    
T  16811064 tcacatttaagtgtgcttgacttgtagcaattttgggatgggtgacctaccgggaagtttccccgtaagcgtgcgagtga 16811143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 30529723 - 30529904
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||| |||| |||||||    
T  30529723 aggtatgagactacatggttgaagtaaggcttataagaattttttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataaga 30529822  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    ||| || | ||| ||||||||||||||||| | | || ||||| ||||||||| | |||||||||| ||||||||||| ||||    
T  30529823 acttcatagttaagcgtgcttgacttggagtagtctttggatgggtgacctactg-gaagtttcccagtaagcatgcgagtga 30529904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 41472337 - 41472500
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||  |||| |||||||    
T  41472337 aggtatgagactgcatggttgaaggaag-cttataagaattgtttggtactacatatatcaacaagatgcatcttcttttcggtagatcattccataaga 41472435  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcc 165  Q
    |||||||  |||  ||||||||||||| |  |||||||||||| |||||||||||  ||||||||    
T  41472436 actccacggttaaacgtgcttgacttgaaacaattttgggatgggtgacctaccggaaagtttcc 41472500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 5 - 183
Target Start/End: Complemental strand, 25238790 - 25238612
Alignment:
Q  5 atgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactc 104  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||||||| |||||| |||| |||||||||||    
T  25238790 atgagactacatggttgaaggaagacttataagaattgtttggtactatctttatcaacaagatgcatcttctttttggtagcccattccataagaactc 25238691  T
Q  105 cacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||| ||| ||||||||||||||||| | | || ||||  |||||||| || |||||||   |||||||||||| ||||    
T  25238690 cacagttaagcgtgcttgacttggagtagtctttggattggtgacctatcgggaagttttttggtaagcatgcgagtga 25238612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 7493917 - 7494046
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||| ||   |||||||    
T  7493917 aggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatgcatcttcttttcggtagcccaaaccataaga 7494016  T
Q  101 actccacaattacgcgtgcttgacttggag 130  Q
    |||||||| ||| || ||||||||||||||    
T  7494017 actccacatttaagcatgcttgacttggag 7494046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 25230358 - 25230186
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| |||||| ||||  ||||||    
T  25230358 aggtatgggactacatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagatacatcttctttttggtagcccattcaataaga 25230259  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagc 173  Q
    |||||||| ||| ||||||||||||||||| | | ||  |||| |||||||| |  ||||||| |||||||||    
T  25230258 actccacagttatgcgtgcttgacttggagtagtcttatgatgggtgacctatcaggaagttttccggtaagc 25230186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 25237945 - 25237773
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| |||||| ||||  ||||||    
T  25237945 aggtatgggactacatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagatacatcttctttttggtagcccattcaataaga 25237846  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagc 173  Q
    |||||||| ||| ||||||||||||||||| | | ||  |||| |||||||| |  ||||||| |||||||||    
T  25237845 actccacagttatgcgtgcttgacttggagtagtcttatgatgggtgacctatcaggaagttttccggtaagc 25237773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 25248147 - 25248329
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||| |||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||| ||||| |    
T  25248147 aggtatgggactgcatggttaaaggaatgtttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataata 25248246  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||  ||  ||||||||||||||||| | | ||  ||||  |||||||||| |||||||| |||||||| |||| ||||    
T  25248247 actccacggttcagcgtgcttgacttggagtagtcttatgatggatgacctaccgggaagtttcacggtaagcgtgcgagtga 25248329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 39640973 - 39641102
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||| | ||||||||||||||| |||||| |||| |||||||    
T  39640973 aggtatgagactacatggttgaaggaagacttataagagttgtttggtactacctatatcaataagatgcatcttctttttggtagctcattccataaga 39641072  T
Q  101 actccacaattacgcgtgcttgacttggag 130  Q
    |||||||| ||| ||||| |||||||||||    
T  39641073 actccacagttaagcgtgtttgacttggag 39641102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 4067454 - 4067298
Alignment:
Q  17 ggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcg 116  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||| |||| ||||||||||||||| ||| |||    
T  4067454 ggttgaaggaagacttataaaaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcattacataagaactccacagttaagcg 4067355  T
Q  117 tgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagc 173  Q
    |||||||||||||| | | || |||||  ||||||||||  |||||| | |||||||    
T  4067354 tgcttgacttggagtagtctttggatggatgacctaccggaaagttttctggtaagc 4067298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 7477227 - 7477352
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||||||||||||||||| ||   |||||||    
T  7477227 aggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcttttcggtagcccaaaccataaga 7477326  T
Q  101 actccacaattacgcgtgcttgactt 126  Q
    |||||||| ||| || ||||||||||    
T  7477327 actccacatttaagcatgcttgactt 7477352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 25802658 - 25802529
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||||||||||| | |||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| |||| |||| |||||||    
T  25802658 aggtatgagactgcatggttaacggaaggctgataagaatggtttggtactacctatatcaacaagatgcatcttcttttcgatagcccattccataaga 25802559  T
Q  101 actccacaattacgcgtgcttgacttggag 130  Q
    | |||||| ||| ||||| |||||||||||    
T  25802558 aatccacagttaagcgtgtttgacttggag 25802529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 32797045 - 32796938
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||| ||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||| |||||||    
T  32797045 aggtatgaaactacatggttgaagcaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttttgtagcacattccataaga 32796946  T
Q  101 actccaca 108  Q
    ||||||||    
T  32796945 actccaca 32796938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 25239187 - 25239070
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||  ||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||| |||| |||||||    
T  25239187 aggtatgggactatatggttgaaggaacgcttataagaattttttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataaga 25239088  T
Q  101 actccacaattacgcgtg 118  Q
    |||||||| ||| |||||    
T  25239087 actccacagttaagcgtg 25239070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 183
Target Start/End: Original strand, 37045090 - 37045250
Alignment:
Q  20 tgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgc 119  Q
    |||||||| ||||||||||||||||||||| |||||||||||||| | ||||||||||||| |||| |  ||| ||||||||||||||| ||| ||||||    
T  37045090 tgaaggaatgcttataagaattgtttggtaatacctatatcaacaaggtgcatcttctttttggtaccctattccataagaactccacagttaagcgtgc 37045189  T
Q  120 ttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    ||||||||||| | | || ||||| ||||||||||| ||   |||||| |||||||||| ||||    
T  37045190 ttgacttggagtagtctttggatgggtgacctaccggga---ttcccgataagcatgcgagtga 37045250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 25803114 - 25802986
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||| ||| ||| |||||||||||||||||||||||||  |||| |||| ||||||||||||||| | ||||||||||||    
T  25803114 aggtatgggactgcatggttgaagtaagacttgtaagaattgtttggtactacctataaaaacaagatgtatcttcttttcggtatcccatttcataaga 25803015  T
Q  101 actccacaattacgcgtgcttgacttgga 129  Q
    |||||  | ||| ||||||||||||||||    
T  25803014 actccgtagttaagcgtgcttgacttgga 25802986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 2911131 - 2911281
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||  |||||||||| ||| | |||||| ||||||||| || |||||||||||||| ||||||| ||||||| |||||| |||| |||||||    
T  2911131 aggtatgggaccacatggttgaaagaatggttataaaaattgtttgatattacctatatcaacaagatgcatattctttttggtagctcattccataaga 2911230  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacct 151  Q
    |||||||| ||| ||||||||||||||||| | | || ||||| |||||||    
T  2911231 actccacagttaagcgtgcttgacttggagtagtctttggatgagtgacct 2911281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 41474033 - 41474216
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||| |||||| ||||||| ||||||||||||||||| |||| |||||||||||| |||  || ||||||| ||| |  ||||  |||| |    
T  41474033 aggtatgtgactggatggttaaaggaagacttataagaattgtttgatacttcctatatcaacaagattgatattctttttggtggatcattctataaaa 41474132  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtgaa 184  Q
    |||||||| | | ||||||||||||||||  |||||||||||| ||||| ||||   ||||||||| |||| | |||| |||||    
T  41474133 actccacagtcaagcgtgcttgacttggaacaattttgggatgggtgacataccagaaagtttcccagtaatcgtgcgggtgaa 41474216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 3899868 - 3899986
Alignment:
Q  33 ataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgacttggagaa 132  Q
    ||||||||||||||||||||| |||| ||||| |||||||||| ||||||  | ||||  |||||||||||||||||| | || |||||||||||||| |    
T  3899868 ataagaattgtttggtactacatataccaacaagatgcatctttttttcgacaacacaaatcataagaactccacaataaagcatgcttgacttggagca 3899967  T
Q  133 attttgggatgtgtgacct 151  Q
    ||||||| ||| |||||||    
T  3899968 attttggtatgggtgacct 3899986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 54 - 166
Target Start/End: Complemental strand, 53150869 - 53150757
Alignment:
Q  54 ctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctac 153  Q
    |||||| |||| ||||||| || |||||||||||  |||||||||||||| |||| |||  ||||||| |||||||| |||||||||||| |||||||      
T  53150869 ctatattaacaagatgcatatttttttcggtagccaatttcataagaacttcacagttaaccgtgcttaacttggagcaattttgggatgggtgacctta 53150770  T
Q  154 cgagaagtttccc 166  Q
     ||||||||||||    
T  53150769 tgagaagtttccc 53150757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 31104070 - 31103984
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagc 87  Q
    |||||||||| ||||||||| ||||||| ||||||||||||||||| ||||| ||||| ||||  ||||||| ||||||| ||||||    
T  31104070 aggtatgagattgcatggttcaaggaagacttataagaattgtttgatactatctataccaactagatgcattttctttttggtagc 31103984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 26310088 - 26309996
Alignment:
Q  12 tgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactc 104  Q
    ||||||||||||||| |  ||||||||||| |||| |||||| |||| ||| | ||||||||||||||  |||||| |||| ||| |||||||    
T  26310088 tgcatggttgaaggacgatttataagaattttttgttactacatataccaaaaagatgcatcttctttatggtagctcattccattagaactc 26309996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 151
Target Start/End: Original strand, 15392570 - 15392696
Alignment:
Q  25 gaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgac 124  Q
    ||||||||||||||||||||||||| ||||  || ||||| |||||  ||||||||| |||||      ||| ||||||||| | |||   |||||||||    
T  15392570 gaaggcttataagaattgtttggtattaccggtaccaacaagatgccacttcttttcagtagccaggaccatcagaactccaaagttaaatgtgcttgac 15392669  T
Q  125 ttggagaaattttgggatgtgtgacct 151  Q
    |||||  |||||||||||| |||||||    
T  15392670 ttggatcaattttgggatgggtgacct 15392696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 151
Target Start/End: Original strand, 15405606 - 15405732
Alignment:
Q  25 gaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgac 124  Q
    ||||||||||||||||||||||||| ||||  || ||||| |||||  ||||||||| |||||      ||| ||||||||| | |||   |||||||||    
T  15405606 gaaggcttataagaattgtttggtattaccggtaccaacaagatgccacttcttttcagtagccaggaccattagaactccaaagttaaatgtgcttgac 15405705  T
Q  125 ttggagaaattttgggatgtgtgacct 151  Q
    |||||  |||||||||||| |||||||    
T  15405706 ttggatcaattttgggatgggtgacct 15405732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 151
Target Start/End: Original strand, 15411015 - 15411141
Alignment:
Q  25 gaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgac 124  Q
    ||||||||||||||||||||||||| ||||  || ||||| |||||  ||||||||| |||||      ||| ||||||||| | |||   |||||||||    
T  15411015 gaaggcttataagaattgtttggtattaccggtaccaacaagatgccacttcttttcagtagccaggaccattagaactccaaagttaaatgtgcttgac 15411114  T
Q  125 ttggagaaattttgggatgtgtgacct 151  Q
    |||||  |||||||||||| |||||||    
T  15411115 ttggatcaattttgggatgggtgacct 15411141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 151
Target Start/End: Original strand, 15417431 - 15417557
Alignment:
Q  25 gaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgac 124  Q
    ||||||||||||||||||||||||| ||||  || ||||| |||||  ||||||||| |||||      ||| ||||||||| | |||   |||||||||    
T  15417431 gaaggcttataagaattgtttggtattaccggtaccaacaagatgccacttcttttcagtagccaggaccattagaactccaaagttaaatgtgcttgac 15417530  T
Q  125 ttggagaaattttgggatgtgtgacct 151  Q
    |||||  |||||||||||| |||||||    
T  15417531 ttggatcaattttgggatgggtgacct 15417557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 3890046 - 3890094
Alignment:
Q  33 ataagaattgtttggtactacctatatcaacatgatgcatcttcttttc 81  Q
    |||||||||||||| |||||| |||||||||| |||||||||| |||||    
T  3890046 ataagaattgtttgctactacatatatcaacaagatgcatctttttttc 3890094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 52
Target Start/End: Complemental strand, 25238845 - 25238816
Alignment:
Q  23 aggaaggcttataagaattgtttggtacta 52  Q
    ||||||||||||||||||||||||||||||    
T  25238845 aggaaggcttataagaattgtttggtacta 25238816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 47518418 - 47518358
Alignment:
Q  12 tgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcat 72  Q
    ||||||||||||||||  |||||||||||||||||  |||| || || ||||| |||||||    
T  47518418 tgcatggttgaaggaaaacttataagaattgtttgaaactatctctaccaacaagatgcat 47518358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 107573 - 107391
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||| |||||||    
T  107573 aggtatgggactgcatggttgaaggaaggcttataagaattgtttgatactaccaatatcaacaagatgcatcttcttttcggtagctcattccataaga 107474  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||| ||||| ||||||||||||||||| |||| ||||    
T  107473 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacgtaccgggaagtttcccggtaagcgtgcgagtga 107391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 10844725 - 10844543
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||| |||| |||||||    
T  10844725 aggtatgggactgcatggttgaaggaaggcttataagagttgtttggtactacctatattaacaagatgcatcttcttttcggtagctcattccataaga 10844626  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| |||||||||||||| || |||||||||||| ||||||||||| |||||||| ||||||||||||| ||||    
T  10844625 actccacagttaagcgtgcttgacttgaagcaattttgggatgggtgacctaccgggaagtttctcggtaagcatgcgagtga 10844543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 22549105 - 22548923
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||| |    
T  22549105 aggtatgtgactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaaa 22549006  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||| |||||||||| |||||| |||| ||||    
T  22549005 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccagtaagcgtgcgagtga 22548923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 12827364 - 12827193
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| | ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  12827364 aggtatgggactacttggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 12827265  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaag 172  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  12827264 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaag 12827193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 22026415 - 22026597
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  22026415 aggtatgggactgcatggttgaatgaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 22026514  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| ||| |||||||| || ||||| || ||||||||||||||||| |||| ||||    
T  22026515 actccacagttaagcgtgcttgacttggagcaatattgggatgggtaacctatcgggaagtttcccggtaagcgtgcgagtga 22026597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 22548659 - 22548477
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||| |    
T  22548659 aggtatgtgactgcatggttgaaggaagttttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataata 22548560  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||| |||||||||| |||||| |||| ||||    
T  22548559 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccagtaagcgtgcgagtga 22548477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 25147572 - 25147754
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  25147572 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtgctacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 25147671  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||| | |||  |||||||||||||||| |||||||||||| ||||||||||| ||||||||| | ||||| |||| ||||    
T  25147672 actccatagttaatcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcctgataagcgtgcgagtga 25147754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 3 - 176
Target Start/End: Complemental strand, 34308587 - 34308414
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  ||| |||||||||    
T  34308587 gtatgagactgtatggttgaaggaaggcttataagaactgtttggtactacctatatcaacaagatgcatcttcttttcggtagcctattccataagaac 34308488  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatg 176  Q
    |||||| ||| ||||||||| ||||||| ||||||| |||| ||||||||||| ||||||||||||||||||||    
T  34308487 tccacacttaagcgtgcttggcttggagcaattttgagatgggtgacctaccgggaagtttcccggtaagcatg 34308414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 17103117 - 17103300
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| | |||||||||||||||||||| |||| |||||||    
T  17103117 aggtatgagactgcatggttgaaggaagacttataagaattgtttggtactgcctatatcaacaagctgcatcttcttttcggtagctcattccataaga 17103216  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtg-tgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||  ||| ||||||||||||||||| |||||||||||| | |||||||||| ||||||||||||||||| |||| ||||    
T  17103217 actccacggttaagcgtgcttgacttggagcaattttgggatgggttgacctaccgggaagtttcccggtaagcgtgcgagtga 17103300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 27925935 - 27926105
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  27925935 aggtatgggactgcatggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataaga 27926034  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaag 172  Q
    |||||||| ||| ||||||||||||||||| || ||||||||| ||||  ||||| ||||||||||||||||    
T  27926035 actccacagttaagcgtgcttgacttggagcaa-tttgggatgggtgaggtaccgggaagtttcccggtaag 27926105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 41659215 - 41659044
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||| |||||||    
T  41659215 aggtatgggactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcgatagctcattacataaga 41659116  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaag 172  Q
    |||||||| ||| ||||| ||||||||||| |||||||||||  ||||||||||| |||||||||| |||||    
T  41659115 actccacagttaagcgtgtttgacttggagcaattttgggataggtgacctaccgggaagtttccctgtaag 41659044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 12100727 - 12100908
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||    
T  12100727 aggtatgagactgcatggttgaaggcaagcttataagatttgtttggtactacctatatcaataagatgcatcttcttttcggtagctcatttcataaga 12100826  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    ||| |||| ||| ||||||||||||||||| |||||| ||||| ||||||||||| |||||||||  |||||| |||| ||||    
T  12100827 acttcacagttaagcgtgcttgacttggagcaatttt-ggatgggtgacctaccgggaagtttcctcgtaagcgtgcgagtga 12100908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 3 - 176
Target Start/End: Complemental strand, 34309047 - 34308870
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatat----caacatgatgcatcttcttttcggtagcacatttcataa 98  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    ||||| ||||||||||||||||||||||  ||| |||||    
T  34309047 gtatgagactgtatggttgaaggaaggcttataagaactgtttggtactacctatatatatcaacaagatgcatcttcttttcggtagcctattccataa 34308948  T
Q  99 gaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatg 176  Q
    |||||||||| ||| ||||||||| ||||||| ||||||| |||| ||||||||||| ||||||||||||||||||||    
T  34308947 gaactccacagttaagcgtgcttggcttggagcaattttgagatgggtgacctaccgggaagtttcccggtaagcatg 34308870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 25144808 - 25144957
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| || |||||| ||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||| |||||||    
T  25144808 aggtatgggattgcatgattgaaggcaggcttataagaattgtttggtactacctatatcagcaagatgcatcttcttttcggtagctcattccataaga 25144907  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacc 150  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| ||||||    
T  25144908 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacc 25144957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 25148003 - 25148167
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||  | |||||||||||||||||||||||||||||||  |||||||||||||| ||||||| |||||||||||||| |||| |||||||    
T  25148003 aggtatgggactgtgtcgttgaaggaaggcttataagaattgtttggtcttacctatatcaacaagatgcatattcttttcggtagctcattccataaga 25148102  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcc 165  Q
    |||||||| ||| ||||||||||||| ||| |||||||||||| ||||||||||| |||||||||    
T  25148103 actccacagttaagcgtgcttgactttgagcaattttgggatgggtgacctaccgggaagtttcc 25148167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 27022448 - 27022296
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||| ||| |||| |||||||    
T  27022448 aggtatgggactacatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaacatgcatcttattttcggcagctcattccataaga 27022349  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctac 153  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| |||||||||    
T  27022348 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctac 27022296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 2044094 - 2044276
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||| |||||| |||| ||||| |    
T  2044094 aggtatgagactacatggttgaaggaaggcttataagaattgtttgatactacctatatcaacaagatgcattttctttttggtagcccattccataata 2044193  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| | | || ||||| ||||||||  | ||||||| ||||||||| |||| ||||    
T  2044194 actccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctaatgggaagttttccggtaagcgtgcgagtga 2044276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 10844919 - 10845043
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  10844919 aggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 10845018  T
Q  101 actccacaattacgcgtgcttgact 125  Q
    |||||||| ||| ||||||||||||    
T  10845019 actccacagttaagcgtgcttgact 10845043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 21316219 - 21316038
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||||||||| |||||| || ||  ||||| |||||||||||||||||||||||||||||| |||||||| ||||||| ||||| ||||||||||||    
T  21316219 aggtatgagactgtatggttaaatgagcgcttaaaagaattgtttggtactacctatatcaacaagatgcatcgtcttttcagtagctcatttcataaga 21316120  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| | ||||||||||||||| |||||||| | | ||||||||||| ||||||| ||||||||| |||| ||||    
T  21316119 actccacagttaagtgtgcttgacttggagtaattttggtaagggtgacctaccgcgaagttt-ccggtaagcgtgcgagtga 21316038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 3 - 173
Target Start/End: Original strand, 32292435 - 32292605
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| | ||||||||||||| | |||| |||| |||||||||    
T  32292435 gtatgggactgcatggttgaaggaatgcttataagaattgtttggtactatctatatcaacaagttgcatcttctttttgctagcccattccataagaac 32292534  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagc 173  Q
    |||||| ||| ||||||||||||||||| | | || ||||| |||| |||||| ||||||| |||||||||    
T  32292535 tccacagttaagcgtgcttgacttggagtagtctttggatgggtgatctaccgggaagttttccggtaagc 32292605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 33852368 - 33852217
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||| |||| |||| |||||||||| |||||| |||| |||||||    
T  33852368 aggtatgagactgtatggttgaaggaaaacttataagaattgtttggtactacctatattaacaagatgtatcttctttttggtagcccattccataaga 33852269  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgaccta 152  Q
    ||| |||||||| ||||||||||||||||| | | || ||||| ||||||||    
T  33852268 acttcacaattaagcgtgcttgacttggagtagtctttggatgggtgaccta 33852217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 8080452 - 8080270
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| |||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| |||| |||||||    
T  8080452 aggtatgggactacatggttgaaggaaagctgataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataaga 8080353  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    ||| |||| ||| ||||||||||||||||| | | || ||||| || ||||||   |||||||| |||||||| |||| ||||    
T  8080352 acttcacagttaagcgtgcttgacttggagtagtctttggatgggtaacctactaggaagtttctcggtaagcgtgcgagtga 8080270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 6465020 - 6464891
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| |||| ||||| |    
T  6465020 aggtatggaactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagctcattccataaca 6464921  T
Q  101 actccacaattacgcgtgcttgacttggag 130  Q
    |||||||| ||| |||||||||||||||||    
T  6464920 actccacagttaagcgtgcttgacttggag 6464891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 43 - 183
Target Start/End: Complemental strand, 31283719 - 31283580
Alignment:
Q  43 tttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgacttggagaaattttgggat 142  Q
    ||||||||||||||||| |||| |||||||||||||||||||||| |||| ||||||||||||||| ||| | ||||||||||| ||| |||||| ||||    
T  31283719 tttggtactacctatattaacaagatgcatcttcttttcggtagcccattccataagaactccacagttaagtgtgcttgactttgagcaatttt-ggat 31283621  T
Q  143 gtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    | ||||||||||| ||||||||||||||||| |||| ||||    
T  31283620 gggtgacctaccgggaagtttcccggtaagcgtgcgagtga 31283580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 41913006 - 41913158
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| |||||| |||| |||||||    
T  41913006 aggtatgggactgcatgtttgaaagaaggcttataagaattgtttggtgctacctatatcaacaagatgcgtcttctttttggtagcccattccataaga 41913105  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctac 153  Q
    ||||| || ||| |||||||||||||| || | | || ||||| |||||||||    
T  41913106 actccgcagttaagcgtgcttgacttgaagtagtctttggatgagtgacctac 41913158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 28375164 - 28375078
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagc 87  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  28375164 aggtatgagactgcatgattgaaggaaggcttataagaattgtttggtactacctacatcaacaagatgcatcttcttttcggtagc 28375078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 3744674 - 3744815
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||  |||||||||| |||||  ||||| |||||||| |||||||||||||||||||    
T  3744674 aggtatgggactgcatggttgaaggaagacttataagaattgtttgacactacctataccaacaatatgcaccttctttttggtagcacatttcataaga 3744773  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggat 142  Q
    |||| ||||||| || |  || |||| ||| |||||||||||    
T  3744774 actctacaattaagctttattaactttgagcaattttgggat 3744815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 27021989 - 27021904
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtag 86  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  27021989 aggtataagactgcatggttgaaggaaggcttataagaattgtttggtactacttatatcaacaagatgcatcttcttttcggtag 27021904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 151
Target Start/End: Complemental strand, 27819354 - 27819206
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||  |||| |||| ||||| |||    
T  27819354 gtatgagacttcatggttgaaggaaggctaataagaattgtttggtactacctatatcaacaaaatgcatcttcttttcaatagctcattccataaaaac 27819255  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacct 151  Q
    |||||| ||| | ||| ||||||| ||| | | || ||||| |||||||    
T  27819254 tccacagttaagtgtgtttgactttgagtagtatttggatgggtgacct 27819206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 15819121 - 15819022
Alignment:
Q  5 atgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactc 104  Q
    |||||||  |||||||||||||| ||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15819121 atgagacaacatggttgaaggaatgcttagaaaaattgtttggtactacatatatcaacatgatgcatcttcttttcggtagcacattccataagaactc 15819022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 28453374 - 28453503
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| |||||||||| |||  ||||||||||||||||  |||||||||||| |||| ||||||||||||||  |||||| |||| |||||||    
T  28453374 aggtatgagacttcatggttgaaagaaaacttataagaattgttttatactacctatattaacaagatgcatcttctttatggtagcccattccataaga 28453473  T
Q  101 actccacaattacgcgtgcttgacttggag 130  Q
    |||| ||| ||| |||||||||||||||||    
T  28453474 actctacagttaagcgtgcttgacttggag 28453503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 164
Target Start/End: Original strand, 3745145 - 3745300
Alignment:
Q  9 gactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccaca 108  Q
    |||| ||||||||||||||  |||||||||| ||||| |||||||||||| |||||  |||||||||||||| |||||| |||| ||||| |||||||||    
T  3745145 gactacatggttgaaggaaaacttataagaactgtttagtactacctataccaacaatatgcatcttctttttggtagcccattccataataactccaca 3745244  T
Q  109 attacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttc 164  Q
     | | ||||||||||||| ||| ||||||||||||  |||||  | ||||||||||    
T  3745245 gtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttc 3745300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 22840639 - 22840532
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| |||||| ||| |||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||| | |||| |||| |||||||    
T  22840639 aggtatgagactacatggtcgaatgaagacttataagaattgtttggtactatctatatcaacaagatgcatcttctttttgttagctcattccataaga 22840540  T
Q  101 actccaca 108  Q
    ||||||||    
T  22840539 actccaca 22840532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 1297043 - 1297193
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||| ||||| |||  || |||||||||||| | ||||  ||||||    
T  1297043 aggtatgagactgcatggttgaagtaaaacttataagaattgtttggtactacctataccaacaagatttatattcttttcggtatcccattatataaga 1297142  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacct 151  Q
    |||||| | ||| | ||| |||||||| || ||| || ||||| |||||||    
T  1297143 actccatagttaagtgtgtttgacttgaagtaatctttggatgagtgacct 1297193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 15567653 - 15567528
Alignment:
Q  14 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattac 113  Q
    |||||| ||||||||||||||||||||||||||  ||||| |||| ||||| ||| ||||||||||| |||||  ||||||||||||||||| || |||     
T  15567653 catggtggaaggaaggcttataagaattgtttgacactacatataccaacaagatacatcttctttttggtagttcatttcataagaactccgcagttaa 15567554  T
Q  114 gcgtgcttgacttggagaaattttgg 139  Q
     |||| ||||||||||| | ||||||    
T  15567553 tcgtgtttgacttggagtagttttgg 15567528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 22705208 - 22705282
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatctt 75  Q
    ||||||| ||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  22705208 aggtatgggactggatgattgaaggaagggttataagaattgtttggtactacctatatcaacaagatgcatctt 22705282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 30527589 - 30527410
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    ||||||||||||||| |||||  | | ||||||||||||||||||||| || || ||||| | ||| ||||||||||| |||||| ||||||||||||||    
T  30527589 gtatgagactgcatgtttgaacca-gacttataagaattgtttggtaccacttacatcaataagatacatcttcttttgggtagcccatttcataagaac 30527491  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||| ||| |  || ||||||| ||| ||| || ||||| |||| |||||   ||  |||||||||||| |||| ||||    
T  30527490 tccacagttaagattgtttgactttgagtaatctttggatgggtgatctacctgaaaacttcccggtaagcgtgcgagtga 30527410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 30335018 - 30334916
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||| ||||||| |||| ||||||| ||||||||| ||||||||||| ||||| ||| ||||||||||||| |||| || ||||||| |    
T  30335018 aggtatgcgactgcaaggttgaaagaagacttataaaaattgtttgatactacctataccaacaagatacatcttcttttcgatagctcaattcataata 30334919  T
Q  101 act 103  Q
    |||    
T  30334918 act 30334916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 10 - 151
Target Start/End: Original strand, 6466756 - 6466892
Alignment:
Q  10 actgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaa 109  Q
    ||||||||||| ||||| | ||||||| ||||||||||||||||||||| ||||| |||||||||  |||||  |||| ||||||||||||||| || |     
T  6466756 actgcatggttaaagga-gacttataaaaattgtttggtactacctataccaacaagatgcatct--ttttc-atagc-catttcataagaactacaaat 6466850  T
Q  110 ttacgcgtgcttgacttggagaaattttgggatgtgtgacct 151  Q
    ||| | || |||||||||||| |||||||| ||| |||||||    
T  6466851 ttaagtgtacttgacttggagcaattttggtatgggtgacct 6466892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 15568100 - 15567972
Alignment:
Q  16 tggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgc 115  Q
    ||||||||||||| ||||||| ||||||||||||  ||||||||||||| |||||||||| ||||   |      ||| |||||||||||||||||| ||    
T  15568100 tggttgaaggaagacttataacaattgtttggtatgacctatatcaacaagatgcatcttttttttttt----tttttaataagaactccacaattaagc 15568005  T
Q  116 gtgcttgacttggagaaattttgggatgtgtga 148  Q
    || |||||||  ||| |||||||||||| ||||    
T  15568004 gtacttgactcagagcaattttgggatgggtga 15567972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29971511 - 29971450
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaa 62  Q
    |||||||||||| |||||||||||||||  |||||||||||||||| ||||| |||||||||    
T  29971511 aggtatgagactacatggttgaaggaagatttataagaattgtttgatactatctatatcaa 29971450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 17429539 - 17429611
Alignment:
Q  4 tatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttc 76  Q
    |||| |||||||| ||||||||||| ||||| || ||| |||||||||||||||||||||| |||| ||||||    
T  17429539 tatgtgactgcattgttgaaggaagacttatgagtattatttggtactacctatatcaacaagatgtatcttc 17429611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 143
Target Start/End: Complemental strand, 10729736 - 10729654
Alignment:
Q  61 aacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgacttggagaaattttgggatg 143  Q
    |||| ||||||||||||||| ||||||  ||| |||||| |||||||||||| | ||||||| |||| || ||||||||||||    
T  10729736 aacaagatgcatcttctttttggtagcctattccataaggactccacaattaagggtgcttggcttgaagcaattttgggatg 10729654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 36968503 - 36968434
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcat 72  Q
    |||||| |||| |||||||||||| | ||||||||||||| ||||| |||| |||||||||| |||||||    
T  36968503 gtatgaaactgtatggttgaaggatgacttataagaattgattggtgctacttatatcaacaagatgcat 36968434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 32292092 - 32292159
Alignment:
Q  116 gtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    ||||||||||||||| | | || ||||| ||||||||||| ||||||||||||||||| |||| ||||    
T  32292092 gtgcttgacttggagtagtctttggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtga 32292159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 138
Target Start/End: Original strand, 6466329 - 6466429
Alignment:
Q  37 gaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgacttggagaaattt 136  Q
    ||||||||||||||||| |||| ||||| | ||||||||| ||| |||||  ||||||||||||| ||||   ||| | |||||||||||| || |||||    
T  6466329 gaattgtttggtactacttataccaacaagttgcatcttccttttggtag-tcatttcataagaaatccattgttaggtgtgcttgacttgaagcaattt 6466427  T
Q  137 tg 138  Q
    ||    
T  6466428 tg 6466429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 3508790 - 3508827
Alignment:
Q  22 aaggaaggcttataagaattgtttggtactacctatat 59  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  3508790 aaggaaggtttataagaattatttggtactacctatat 3508827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 10729724 - 10729788
Alignment:
Q  66 gatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgacttggag 130  Q
    |||||||||| ||||| ||  | |||| ||||||||||||||||||| ||||| | |||||||||    
T  10729724 gatgcatcttgttttctgttacccattccataagaactccacaattaagcgtgatagacttggag 10729788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 125; Significance: 2e-64; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 1821942 - 1822114
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||| |||||||    
T  1821942 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataaga 1822041  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagc 173  Q
    |||||||| ||| ||||||||||||||||| | | || ||||| ||||||||||| |||||||||||||||||    
T  1822042 actccacatttaagcgtgcttgacttggagtagtctttggatgggtgacctaccgggaagtttcccggtaagc 1822114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 4 - 183
Target Start/End: Original strand, 2474444 - 2474623
Alignment:
Q  4 tatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaact 103  Q
    |||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||    
T  2474444 tatgggactgcatggttgaaggaagacttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaact 2474543  T
Q  104 ccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    ||||| ||| ||||||||||||||||| ||||||| |||| |||||||||||  ||||||||||||||||||||| ||||    
T  2474544 ccacagttaagcgtgcttgacttggagcaattttgagatgggtgacctaccggaaagtttcccggtaagcatgcgagtga 2474623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 17445557 - 17445383
Alignment:
Q  9 gactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccaca 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||| |||||||| ||||||    
T  17445557 gactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttatcggtagctcattccataagaaatccaca 17445458  T
Q  109 attacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
     ||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||| |||| ||||    
T  17445457 gttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtga 17445383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 21886256 - 21886074
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||| |||||||    
T  21886256 aggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacatatatcaacaagatgcatcttcttttcggtagctcattccataaga 21886157  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||| | ||| | ||||||||||||||| |||||||||||| ||||||||| | ||||||||||||||||| |||| ||||    
T  21886156 actccaaagttaagtgtgcttgacttggagcaattttgggatgggtgacctactgggaagtttcccggtaagcgtgcgagtga 21886074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 3 - 171
Target Start/End: Original strand, 189106 - 189274
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||| |||||||||    
T  189106 gtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgtatcttcttttcggtagctcattccataagaac 189205  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaa 171  Q
    |||||| ||| || |||||||||||||| |||||||||||| |||||||||||  ||||||||||||||    
T  189206 tccacagttaagcatgcttgacttggagcaattttgggatgggtgacctaccggaaagtttcccggtaa 189274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 34371656 - 34371830
Alignment:
Q  9 gactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccaca 108  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||| |||||    
T  34371656 gactgcatggttgaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacaccaca 34371755  T
Q  109 attacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
     ||| ||||||||||||||||| |||||||||||| ||||||||| | ||||||||||||||||| |||| ||||    
T  34371756 gttaagcgtgcttgacttggagcaattttgggatgggtgacctactgggaagtttcccggtaagcgtgcgagtga 34371830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 5 - 152
Target Start/End: Original strand, 2473999 - 2474146
Alignment:
Q  5 atgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactc 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||| |||||||||||    
T  2473999 atgagactgcatggttgaaggaaggcttataagaattgtttggtactgcctatatcaacaagatgcatcttcttttcggtagctcattccataagaactc 2474098  T
Q  105 cacaattacgcgtgcttgacttggagaaattttgggatgtgtgaccta 152  Q
    |||| ||| ||||||||||||||||| |||||||||||| ||||||||    
T  2474099 cacagttaagcgtgcttgacttggagcaattttgggatgggtgaccta 2474146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 2193852 - 2194006
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  2193852 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 2193951  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccg 155  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| |||||||||||    
T  2193952 actccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccg 2194006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 8642144 - 8641963
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  8642144 aggtatgggactgcatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaga 8642045  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||||| ||| ||||||||||||||||| ||||||  |||| |||||||| || |||||||| |||||||| |||| ||||    
T  8642044 actccacagttaagcgtgcttgacttggagcaattttaagatgggtgaccta-cgggaagtttctcggtaagcgtgcgagtga 8641963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 22557005 - 22557187
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||   |||||    
T  22557005 aggtatgggactgcatggttgaaggaaggcttatatgaattgtttggtactaccaatatcaacaagatgcatcttcttttcggtagctcattctttaaga 22557104  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    ||| |||| ||| |||||| |||||||||| |||||||||||| ||||||||||| ||||||||||||||||| |||| ||||    
T  22557105 acttcacagttaagcgtgcctgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtga 22557187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 42788748 - 42788574
Alignment:
Q  9 gactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccaca 108  Q
    |||| |||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| || ||||||||||||    
T  42788748 gactacatggttgaaagaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccacaagaactccaca 42788649  T
Q  109 attacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
     ||| ||||||||||||||||| |||||||||||  ||||||||||| |||||||| |||||||| |||| ||||    
T  42788648 gttaagcgtgcttgacttggagcaattttgggataggtgacctaccgggaagtttctcggtaagcttgcgagtga 42788574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 3886709 - 3886529
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    ||||| ||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||    
T  3886709 gtatgggactgcatggtagaaggaatgcttatatgaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaac 3886610  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||| ||| ||||| ||||| ||||| |||||| ||||| ||||||||||| |||||||||| |||||| |||| ||||    
T  3886609 tccacagttaagcgtgtttgacgtggagcaatttttggatgggtgacctaccgggaagtttcccagtaagcgtgcgagtga 3886529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 34372106 - 34372286
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    ||||| |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||    
T  34372106 gtatgggactacatggttgaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaac 34372205  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    | |||| ||| ||||||||||||||||| |||||||||||  ||||||||||| ||||||| ||| ||||| |||| ||||    
T  34372206 ttcacagttaagcgtgcttgacttggagcaattttgggattggtgacctaccgggaagttttccgataagcgtgcgagtga 34372286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 3887167 - 3886985
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||| |||||| ||||| |||||||||||||||||||||| |||||||||||||||||||| | |||| |||||||    
T  3887167 aggtatgggactgcatggttgaaggaagacttatatgaattatttggtactacctatatcaacaagatgcatcttcttttcggtaactcattccataaga 3887068  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    ||| |||| ||| ||||||||||||||||| |||||| ||||| ||||||||| | |||||||||| |||||| |||| ||||    
T  3887067 acttcacagttaagcgtgcttgacttggagcaatttttggatgggtgacctactgggaagtttcccagtaagcgtgcgagtga 3886985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 22556572 - 22556754
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||   |||||    
T  22556572 aggtatgggactgcatggttgaaggaaggcttatatgaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattctttaaga 22556671  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    ||| |||| ||| |||||  |||||||||| |||||||||||| ||||||||||  |||||||| |||||||| |||| ||||    
T  22556672 acttcacagttaagcgtggctgacttggagcaattttgggatgggtgacctaccaggaagtttctcggtaagcgtgcgagtga 22556754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 34867826 - 34867980
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  34867826 aggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataaga 34867925  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccg 155  Q
    |||||| | ||| |||||||| |||| ||| |||||||||||  ||||| |||||    
T  34867926 actccatagttaagcgtgcttaactttgagcaattttgggataggtgacttaccg 34867980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 10927513 - 10927341
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||| |||||||    
T  10927513 aggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataaga 10927414  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagc 173  Q
    |||||||| |||  |||||||||||||||| | | || ||||| |||||| |||| |||||||  ||||||||    
T  10927413 actccacagttaaacgtgcttgacttggagtagtctttggatgggtgaccgaccgggaagtttttcggtaagc 10927341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 10927056 - 10926884
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||  |||| |||||||    
T  10927056 aggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttccttttggtagtccattccataaga 10926957  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagc 173  Q
    |||||||| |||  |||||||||||||||| | | || ||||| ||||||||||| ||||||||| |||||||    
T  10926956 actccacagttaaacgtgcttgacttggagtagtctttggatgggtgacctaccgggaagtttcctggtaagc 10926884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 27646945 - 27646780
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| | || ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||| ||||||||||||    
T  27646945 aggtatggggctacatggttgaaggaaggcttataagaattgtttggtactacctataacaacaagatgcatcttctttttggtagcccatttcataaga 27646846  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttccc 166  Q
    |||||||| ||| ||||||||| ||||||| | | || | ||| ||||||||||| ||||||||||    
T  27646845 actccacagttaagcgtgcttgtcttggagtagtctttgcatgggtgacctaccgggaagtttccc 27646780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 8391427 - 8391269
Alignment:
Q  5 atgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactc 104  Q
    |||||||| |||| |||||||||| |||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||  ||| |||||||||||    
T  8391427 atgagactacatgattgaaggaagacttataagaattgtttggtact-cctgtatcaacaagatgcatcttcttttcggtagctaattccataagaactc 8391329  T
Q  105 cacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttc 164  Q
    || | ||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||||    
T  8391328 catagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttc 8391269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 15513123 - 15512940
Alignment:
Q  1 aggtatgagactgcatggttgaaggaag--gcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataa 98  Q
    ||||||| |||| ||||||||||||||   |||||||||||||||| ||||||||| ||||||||| ||||||||||||||| |||| | |||| |||||    
T  15513123 aggtatgggactacatggttgaaggaatatgcttataagaattgtt-ggtactaccaatatcaacaagatgcatcttctttttggtatctcattccataa 15513025  T
Q  99 gaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    ||||||||||||||  ||||||||||||| || ||||||||||||  |||||||||| ||||||||||||||||| |||| ||||    
T  15513024 gaactccacaattaaacgtgcttgacttgaagcaattttgggatggatgacctaccgggaagtttcccggtaagcgtgcgagtga 15512940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 10 - 151
Target Start/End: Complemental strand, 18750297 - 18750156
Alignment:
Q  10 actgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaa 109  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||| ||| | ||||||||||||||||||||||  ||| ||||||||||||| ||    
T  18750297 actgcatggttgaaggaaggattataacaattgtttggtactacctataccaaaaagatgcatcttcttttcggtagcttattccataagaactccataa 18750198  T
Q  110 ttacgcgtgcttgacttggagaaattttgggatgtgtgacct 151  Q
    |||  ||| |||||||||||| |||||| ||||| |||||||    
T  18750197 ttaatcgtacttgacttggagcaattttaggatgggtgacct 18750156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 20039576 - 20039403
Alignment:
Q  9 gactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccaca 108  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| |||| ||||||||||| |||    
T  20039576 gactacatagttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcattttctttt-ggtagcccattccataagaactctaca 20039478  T
Q  109 attacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
     ||| | ||||||||||| ||| | | || ||||  ||||||||  | ||||||||||||||||| |||| ||||    
T  20039477 gttaagtgtgcttgacttagagtagtctttggattggtgacctattgggaagtttcccggtaagcgtgcgagtga 20039403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 29680210 - 29680045
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| ||||||||||||||||||||||||       ||||| |||||||||||||| ||||||||||||||| |||||| |||| |||||||    
T  29680210 aggtatgggactacatggttgaaggaaggcttataag-------tggtaatacctatatcaacaagatgcatcttctttttggtagcccattacataaga 29680118  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagc 173  Q
    |||||||| ||| ||||| ||||||||||| | | || ||||| ||||||| ||||||||||||||| |||||    
T  29680117 actccacagttaagcgtgtttgacttggagtagtctttggatgggtgaccttccgagaagtttcccgataagc 29680045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 39146975 - 39147104
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| |||||||||||| || ||||||||||||||||| |||||| ||||| |||| ||||||||||||||| |||||| |||| |||||||    
T  39146975 aggtatgggactacatggttgaaggtagacttataagaattgtttgatactacttatattaacaagatgcatcttctttttggtagcccattccataaga 39147074  T
Q  101 actccacaattacgcgtgcttgacttggag 130  Q
    |||||||| ||| |||||||||||||||||    
T  39147075 actccacagttaagcgtgcttgacttggag 39147104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 18304467 - 18304630
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| ||||| ||| | || |||||||  ||||||||||||||||||||||||||| ||||||| |||||||||||||| |||| |||||||    
T  18304467 aggtatgggactacatggatgatgaaaagcttatataaattgtttggtactacctatatcaacaagatgcatattcttttcggtagctcattccataaga 18304566  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttc 164  Q
    | |||||| ||| || || ||||||||||| ||||||| |||| |||||||   ||||||||||    
T  18304567 attccacagttaagcatgtttgacttggagcaattttgtgatgggtgaccttttgagaagtttc 18304630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 30719898 - 30719775
Alignment:
Q  18 gttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgt 117  Q
    |||||||||||||||||| ||||||||||||||||||||||  |||| |||||||||||||||||||||  ||   ||||||||||||||||||| ||||    
T  30719898 gttgaaggaaggcttatatgaattgtttggtactacctataaaaacaagatgcatcttcttttcggtaggtcaaaccataagaactccacaattaagcgt 30719799  T
Q  118 gcttgacttggagaaattttggga 141  Q
    |||  |||||||| ||||||||||    
T  30719798 gctcaacttggagcaattttggga 30719775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 18 - 164
Target Start/End: Complemental strand, 30684649 - 30684503
Alignment:
Q  18 gttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgt 117  Q
    |||||||| ||||||||| |||||||||||||||| |||||  |||| |||||||||||||||||||||  ||   ||||||||||||||| ||| ||||    
T  30684649 gttgaagggaggcttatatgaattgtttggtactatctataaaaacaagatgcatcttcttttcggtaggtcaaaccataagaactccacagttaagcgt 30684550  T
Q  118 gcttgacttggagaaattttgggatgtgtgacctaccgagaagtttc 164  Q
    |||  |||||||| |||||||||||| ||||||| | || |||||||    
T  30684549 gctcaacttggagcaattttgggatgggtgaccttctgaaaagtttc 30684503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 19 - 143
Target Start/End: Complemental strand, 20858633 - 20858509
Alignment:
Q  19 ttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtg 118  Q
    |||||| |||||||||||||||||||||||| |  ||||||||||| ||||| |||||||||| ||||| |||| ||||||||||||| | ||| |  ||    
T  20858633 ttgaagaaaggcttataagaattgtttggtattttctatatcaacaagatgcttcttcttttctgtagctcattccataagaactccatagttaaggttg 20858534  T
Q  119 cttgacttggagaaattttgggatg 143  Q
    |||||||||||| || |||||||||    
T  20858533 cttgacttggagcaactttgggatg 20858509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 15 - 151
Target Start/End: Complemental strand, 24182341 - 24182206
Alignment:
Q  15 atggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacg 114  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| ||||| ||||||||||| |||||||| | ||   ||||| ||||  ||| ||| |    
T  24182341 atggttgaaggaaggcttataagaattatttggtactatctataccaacaagatgcatcttc-tttcggtaccccaaaccataataacttaacagttaag 24182243  T
Q  115 cgtgcttgacttggagaaattttgggatgtgtgacct 151  Q
    |||| ||||||||||| |||||||||||| |||||||    
T  24182242 cgtggttgacttggagcaattttgggatgggtgacct 24182206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 5066999 - 5066872
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    ||||||||||| ||| || ||||||  |||||||||||||||||||| || ||||||||||| ||||||| ||||||| |||||   ||||||||| |||    
T  5066999 gtatgagactgtatgattaaaggaaaacttataagaattgtttggtattatctatatcaacaagatgcattttctttttggtagtctatttcataaaaac 5066900  T
Q  103 tccacaattacgcgtgcttgacttggag 130  Q
    ||||||||||  |||| ||| |||||||    
T  5066899 tccacaattaaacgtgtttgccttggag 5066872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 16370818 - 16370732
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagc 87  Q
    |||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||| || | |||||||||| ||||||    
T  16370818 aggtataagactgcatggttgaaggaaaacttataagaattgtttggtactacttatatcaacaagacgtatcttctttttggtagc 16370732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 139
Target Start/End: Original strand, 42429194 - 42429319
Alignment:
Q  14 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattac 113  Q
    ||||||||||||| | |||||||||||||||||||||||||| ||||||||  |||||| |||||||| ||||| | || |||||||||| || | |||     
T  42429194 catggttgaaggaggacttataagaattgtttggtactacctttatcaacaatatgcatattcttttccgtagcccgttacataagaacttcatagttaa 42429293  T
Q  114 gcgtgcttgacttggagaaattttgg 139  Q
    | |||||||||||  || ||||||||    
T  42429294 gggtgcttgacttaaagcaattttgg 42429319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 45 - 173
Target Start/End: Complemental strand, 11757347 - 11757219
Alignment:
Q  45 tggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgacttggagaaattttgggatgt 144  Q
    ||||||||| ||||||||||  ||||||||||||||||||||  || | ||||||||||||||| ||| |||||||||||||  || ||||| | ||||     
T  11757347 tggtactacttatatcaacaaaatgcatcttcttttcggtagttcaatccataagaactccacagttaagcgtgcttgacttacagcaatttcgagatgg 11757248  T
Q  145 gtgacctaccgagaagtttcccggtaagc 173  Q
    ||||||||||| ||| |||  ||||||||    
T  11757247 gtgacctaccgggaaatttttcggtaagc 11757219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 2058763 - 2058664
Alignment:
Q  4 tatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaact 103  Q
    |||||||||| ||| |||||||||| |||||| |||||||||||||||||||||||||||| ||||||  |||| ||   ||||||||| ||||||||||    
T  2058763 tatgagactggatgattgaaggaagacttatatgaattgtttggtactacctatatcaacaagatgcaaattctgttaaatagcacattccataagaact 2058664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 4658102 - 4657956
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||| |||||||||| ||||  |||||||| ||||||| ||||||||||| |||||  |||||||||||||| |||||  |||| |||||||    
T  4658102 aggtatgagacttcatggttgaacgaaga-ttataagacttgtttgatactacctataacaacaacatgcatcttctttttggtagtccattccataaga 4658004  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgac 149  Q
    ||| |||| |||  | |||||||||| || | ||||||| ||| |||||    
T  4658003 acttcacagtta-tcatgcttgacttagatatattttggaatgggtgac 4657956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 11160791 - 11160713
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttt 79  Q
    |||||||| ||| ||| ||||||||||||||||||| ||||||||||||||| |||| |||||| ||||||| ||||||    
T  11160791 aggtatgacactacatagttgaaggaaggcttataataattgtttggtactatctatgtcaacaagatgcatattcttt 11160713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 32574767 - 32574632
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||||||||||| |||| ||| |||||||||| ||||||||||||||||||||||  ||||  |||||||||  ||| |||||| ||    |||| |    
T  32574767 aggtatgagactgcacggttaaag-aaggcttataggaattgtttggtactacctatacaaacaaaatgcatctttcttttggtagcccaaactataata 32574669  T
Q  101 actccacaattacgcgtgcttgacttggagaaatttt 137  Q
    ||| || | ||| ||||||||||||||||| ||||||    
T  32574668 acttcatagttaagcgtgcttgacttggagcaatttt 32574632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 108
Target Start/End: Complemental strand, 4673568 - 4673474
Alignment:
Q  14 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccaca 108  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||| ||||||| ||||||| ||||   |||| |||||||||||||||    
T  4673568 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccaca 4673474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 43356729 - 43356651
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttctttt 80  Q
    ||||||||||||||||| |||| ||| | ||||||||||||||||||||| ||||| | |||||  ||||||||||||||    
T  43356729 aggtatgagactgcatgattga-ggatgacttataagaattgtttggtacaacctaaaccaacaatatgcatcttctttt 43356651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 163
Target Start/End: Original strand, 4102908 - 4102994
Alignment:
Q  77 ttttcggtagcacatttcataagaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagttt 163  Q
    ||||||||||| ||   |||||||||| |||| |||  |||||||||||||||| ||||||| |||| ||||||| | |||||||||    
T  4102908 ttttcggtagcccaaaccataagaacttcacagttaaacgtgcttgacttggagcaattttgagatgagtgaccttctgagaagttt 4102994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 22975120 - 22975076
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgttt 45  Q
    ||||||| |||||||||||||||| || |||||||||||||||||    
T  22975120 aggtatgtgactgcatggttgaagaaaagcttataagaattgttt 22975076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 75
Target Start/End: Complemental strand, 39801531 - 39801498
Alignment:
Q  42 gtttggtactacctatatcaacatgatgcatctt 75  Q
    ||||||||||||||||||||||| ||||||||||    
T  39801531 gtttggtactacctatatcaacaagatgcatctt 39801498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 148
Target Start/End: Original strand, 5785944 - 5786028
Alignment:
Q  64 atgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtga 148  Q
    |||||||||||   ||||| |||| |||| ||||||||||| ||  ||| ||||| ||||||||||| |||||| ||||| ||||    
T  5785944 atgatgcatctagatttcgatagcccattccataagaactctacgcttaagcgtgtttgacttggagcaattttaggatgagtga 5786028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 2778 - 2949
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||| |||| |||||||    
T  2778 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatattcttttcggtagctcattccataaga 2877  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaag 172  Q
    |||||||| ||| ||||||||||||||||| |||||||||||| | ||||||||| ||||||||||||||||    
T  2878 actccacagttaagcgtgcttgacttggagcaattttgggatgggagacctaccgggaagtttcccggtaag 2949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 2320 - 2138
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||| |||||||    
T  2320 aggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcttattccataaga 2221  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||| | | ||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||| ||||||||| |||| ||||    
T  2220 actcaatagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagttttccggtaagcgtgcgagtga 2138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 10338 - 10517
Alignment:
Q  3 gtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaac 102  Q
    ||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||| |||||||||    
T  10338 gtatgggactgcatggttcaaggaaggcttataagaattgtttagtactacctatatcaacaagatgcatctttttttcggtagctcattccataagaac 10437  T
Q  103 tccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    |||||| ||| ||||||||||||||||| |||||| ||||| ||||||||||| ||||||||| ||||||| |||| ||||    
T  10438 tccacagttaagcgtgcttgacttggagcaatttt-ggatgggtgacctaccgggaagtttcctggtaagcgtgcgagtga 10517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 112; Significance: 9e-57; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 4597 - 4767
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||    
T  4597 aggtatgggactgcatggttgaaggaaggtttagaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattttataaga 4696  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaag 172  Q
    |||||||| ||| | |||||| |||||||| || ||||||||| ||||||||||| ||||||||||||||||    
T  4697 actccacagttaagtgtgcttaacttggagcaa-tttgggatgggtgacctaccgggaagtttcccggtaag 4767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 5052 - 5227
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggctt-----ataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttca 95  Q
    ||||||| ||||||||||||||||||||| ||     | ||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||    
T  5052 aggtatgggactgcatggttgaaggaaggtttaaaagagaagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagctcatttca 5151  T
Q  96 taagaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaag 172  Q
    ||||||||||||| ||| |||||||| |||||||| || ||||||||| ||||||||||  ||| ||||||||||||    
T  5152 taagaactccacagttaagcgtgcttaacttggagcaa-tttgggatgggtgacctacctggaaatttcccggtaag 5227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 154793 - 154964
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| ||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||| ||||| |||| |||||||    
T  154793 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcatcttcttttcagtagctcattccataaga 154892  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaag 172  Q
    |||||||| ||| ||||||||||||||||| |||||||| ||| ||||||||||| |||||||| |||||||    
T  154893 actccacagttaagcgtgcttgacttggagcaattttggaatgggtgacctaccgggaagtttctcggtaag 154964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 111; Significance: 3e-56; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 162788 - 162606
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||| |||||||    
T  162788 aggtatgtgactgcatggttgaaggaagacttataagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagctcattccataaga 162689  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatgcgtgtga 183  Q
    ||||| || ||| ||||||||||||||||| || ||||||||| ||||||||||  |||||||| || ||||| |||| ||||    
T  162688 actccgcagttaagcgtgcttgacttggagcaactttgggatgagtgacctacctggaagtttcgcgataagcgtgcgagtga 162606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 69925 - 69775
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||  |||| |||| |||||||    
T  69925 aggtatgagactgcatcgttgaaggaatgcttataataattgtttggtactacctatatcaacatgatgcatctttttttcattagctcattccataaga 69826  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacct 151  Q
    |||||||| ||| ||| |||||||| |||| | | || ||||| |||||||    
T  69825 actccacagttatgcgggcttgactaggagtagtctttggatgggtgacct 69775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 183
Target Start/End: Original strand, 163167 - 163289
Alignment:
Q  61 aacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaag 160  Q
    |||| |||||||||||||||||||||| ||||   |||||| |||||| ||| ||||||||||||||||| |||||||||||| ||||||||||||||||    
T  163167 aacaagatgcatcttcttttcggtagctcattctttaagaattccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgagaag 163266  T
Q  161 tttcccggtaagcatgcgtgtga 183  Q
    |||||| |||||| |||| ||||    
T  163267 tttcccagtaagcgtgcgagtga 163289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 173
Target Start/End: Complemental strand, 163179 - 163072
Alignment:
Q  66 gatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcc 165  Q
    |||||||||| ||||||||||| |||| ||||||||||||||| ||| ||||||||||||||||| |||||||||||| |||||||| || ||||||||     
T  163179 gatgcatcttgttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctatcgggaagtttct 163080  T
Q  166 cggtaagc 173  Q
    ||||||||    
T  163079 cggtaagc 163072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 17708 - 17556
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||| || |||||||||    
T  17708 aggtatgggactacatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaggatgtatcttctttttggtagctcaattcataaga 17609  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctac 153  Q
    |||||||| ||| ||||||||||||||||| | | || ||||| |||||||||    
T  17608 actccacagttaagcgtgcttgacttggagtactctttggatgggtgacctac 17556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 18244 - 18094
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| ||| ||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||| |||| ||||||  ||| |||||||    
T  18244 aggtatgtgactacatagttgaaggaagacttataagaattgtttgatactacctatatcaacaagatgcatctt-tttttggtagctaattccataaga 18146  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgaccta 152  Q
    |||||||| ||| ||||||||||||||||| | | || ||||| ||||||||    
T  18145 actccacagttaagcgtgcttgacttggagtagtctttggatgggtgaccta 18094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 51 - 164
Target Start/End: Complemental strand, 13593 - 13480
Alignment:
Q  51 tacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacc 150  Q
    |||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||| ||| ||||||||||||| ||| |||||||||||| ||||||    
T  13593 tacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgactttgagcaattttgggatgggtgacc 13494  T
Q  151 taccgagaagtttc 164  Q
    ||||| ||||||||    
T  13493 taccgggaagtttc 13480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 66 - 172
Target Start/End: Complemental strand, 14747 - 14641
Alignment:
Q  66 gatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcc 165  Q
    |||||||||| ||||||||||| |||| ||||||||||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||| |||||||||    
T  14747 gatgcatcttgttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcc 14648  T
Q  166 cggtaag 172  Q
    |||||||    
T  14647 cggtaag 14641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 75; Significance: 1e-34; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 245122 - 245290
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  |   |||||||    
T  245122 aggtatgggactacatggttgaagggaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc-tttcggtagcctaaaccataaga 245220  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagc 173  Q
    ||||||||   | ||||||||||||| ||| ||||||| |||| ||||||| | | |||||||| ||| ||||    
T  245221 actccaca---aagcgtgcttgacttagagcaattttgagatgggtgaccttctgggaagtttctcggaaagc 245290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 245551 - 245674
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||| |||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||  |   |||||||    
T  245551 aggtatgggacttcatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagcctaaaccataaga 245650  T
Q  101 actccacaattacgcgtgcttgac 124  Q
    |||||||| ||| |||||||||||    
T  245651 actccacagttaagcgtgcttgac 245674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 245677 - 245719
Alignment:
Q  94 cataagaactccacaattacgcgtgcttgacttggagaaattt 136  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||    
T  245677 cataagaactccacagttaagcgtgcttgacttggagcaattt 245719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 2154 - 2270
Alignment:
Q  14 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattac 113  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||| |||||| |||| | ||||||||||||| |||     
T  2154 catggttgaaggaaggcttataagaattgtttggtactccctatataaacaagatgcatcttctttttggtagcccattccttaagaactccacagttaa 2253  T
Q  114 gcgtgcttgacttggag 130  Q
    || |||||||| |||||    
T  2254 gcatgcttgacatggag 2270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 23709 - 23785
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttct 77  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23709 aggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttct 23785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 4092 - 3993
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    ||||||| |||||||| |||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||| ||||| ||||||    
T  4092 aggtatgggactgcattgttgaaggaatgcttataagaattgtttggtactacctgtatcaacaagatgcatcttctttttggtagcccattttataaga 3993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 142384 - 142305
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttctttt 80  Q
    ||||||| |||| |||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  142384 aggtatgggacttcatggttgaaggaatgtttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 142305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 26106 - 26251
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataaga 100  Q
    |||| ||||||| |||||||| |  | ||||||||  |||| ||||||||||| |||||||||||||||||||||||||| |||||| ||||| ||||||    
T  26106 aggtgtgagacttcatggttgcataatggcttatacaaattttttggtactacatatatcaacatgatgcatcttctttttggtagctcattttataaga 26205  T
Q  101 actccacaattacgcgtgcttgacttggagaaattttgggatgtgtga 148  Q
    ||||  || ||| | ||||||||||||||| | |||| ||||| ||||    
T  26206 actc--cagttaagtgtgcttgacttggagtatttttaggatgagtga 26251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 16072 - 16151
Alignment:
Q  1 aggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttctttt 80  Q
    |||||||||| ||||| |||||| || | ||| ||||||||||||||| ||| ||||||||||||||||| |||| ||||    
T  16072 aggtatgagattgcatagttgaatgatgacttgtaagaattgtttggtgctatctatatcaacatgatgcctcttttttt 16151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 130
Target Start/End: Original strand, 14785 - 14906
Alignment:
Q  9 gactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccaca 108  Q
    |||||||  |||||||||| ||||||||||||||||||||| |||||||||||| | |||||||| |||||||||||   ||||  ||||||||| ||||    
T  14785 gactgcagtgttgaaggaatgcttataagaattgtttggtaatacctatatcaataagatgcatcgtcttttcggtaattcattgaataagaacttcaca 14884  T
Q  109 attacgcgtgcttgacttggag 130  Q
     ||| || || |||||||||||    
T  14885 gttaagcatgtttgacttggag 14906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 176
Target Start/End: Original strand, 421 - 521
Alignment:
Q  76 cttttcggtagcacatttcataagaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcat 175  Q
    |||||||||||| |||| ||||| | ||||| | ||| ||||||||||| ||||| |||||||||||| ||||||||||| ||||||||||| |||||||    
T  421 cttttcggtagctcattccataaaatctccatagttaagcgtgcttgacatggagcaattttgggatgggtgacctaccgggaagtttcccgataagcat 520  T
Q  176 g 176  Q
    |    
T  521 g 521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 1698 - 1636
Alignment:
Q  114 gcgtgcttgacttggagaaattttgggatgtgtgacctaccgagaagtttcccggtaagcatg 176  Q
    ||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||    
T  1698 gcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcatg 1636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 45425 - 45497
Alignment:
Q  4 tatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttc 76  Q
    |||| |||| ||| ||||||||||| ||||| |||||| |||||||||||||||||||||| |||| ||||||    
T  45425 tatgtgactacattgttgaaggaagacttatgagaattatttggtactacctatatcaacaagatgtatcttc 45497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 44807 - 44681
Alignment:
Q  25 gaaggcttataagaattgtttggtactacctatatcaacatgatgcatcttcttttcggtagcacatttcataagaactccacaattacgcgtgcttgac 124  Q
    ||||||||||||||||||||||||| ||||  || ||||| |||||  ||||||||| |||||      ||| ||||||||| | |||   |||||||||    
T  44807 gaaggcttataagaattgtttggtattaccggtaccaacaagatgccacttcttttcagtagccaggaccattagaactccaaagttaaatgtgcttgac 44708  T
Q  125 ttggagaaattttgggatgtgtgacct 151  Q
    |||||  |||||||||||| |||||||    
T  44707 ttggatcaattttgggatgggtgacct 44681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 7071 - 7128
Alignment:
Q  94 cataagaactccacaattacgcgtgcttgacttggagaaattttgggatgtgtgacct 151  Q
    ||||||||||||||| ||| || |||||||||||||| |||||||| ||| |||||||    
T  7071 cataagaactccacagttaagcatgcttgacttggagcaattttggtatgggtgacct 7128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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