View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11218_low_1 (Length: 736)
Name: NF11218_low_1
Description: NF11218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11218_low_1 |
 | |
|
| [»] scaffold0692 (2 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 712; Significance: 0; HSPs: 36)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 712; E-Value: 0
Query Start/End: Original strand, 1 - 732
Target Start/End: Complemental strand, 7193838 - 7193107
Alignment:
| Q |
1 |
tttttgattatgcttaagtctctgatgacatccactatattcattctttcttttggtgattccactgaacaagcaagtccaatcctaaaaagtgaaacta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7193838 |
tttttgattatgcttaagtctctgatgacatccactatattcattctttcttttggtgattccactgaacaagcaagtccaatcctaaaaagtgaaacta |
7193739 |
T |
|
| Q |
101 |
cgcacttctctacatttggagtgaaatttccactgtttccatcttctattgttgcttctatatttcttggtacaagatttgggtccaaaatatgtataag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7193738 |
cgcacttctctacatttggagtgaaatttccactgtttccatcttctattgttgcttctatatttcttggtacaagatttgggtccaaaatatgtataag |
7193639 |
T |
|
| Q |
201 |
attattaggcaacgaaatttcaacaaaaatacgtagattttgaccattgtcaaacatttcatctaccggtctccttccggtaagaatttccaacaaaagc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7193638 |
attattaggcaacgaaatttcaacaaaaatacgtagattttgaccattgtcaaacatttcatctaccggtctccttccggtaagaatttccaacaaaagc |
7193539 |
T |
|
| Q |
301 |
atcccgaagctatacatatcaccatatgtagatacttcagaacccattccatattctacaagataaagcaaaaacatttaataaaccctaactagtagaa |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
7193538 |
atcccgaagctatacatatcaccatatgtagatacttcagaacccattccatattctacaagataaagcaaaaatatttaataaaccctaactagtagaa |
7193439 |
T |
|
| Q |
401 |
tatcaaacataaactaaaagataggagaattcaatgaaacaccaagtgatttaagagtctataaaaatacctggaggagcatagccaatagtccctttaa |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7193438 |
tatcaaacataaactaaaagataggagaattcaatgaaacaccaagtgatttaagagtctgtaaaaatacctggaggagcatagccaatagtccctttaa |
7193339 |
T |
|
| Q |
501 |
ttccaattgtactagtttctcgatgagaggtgtcgtcaataactgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaag |
600 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7193338 |
ttccaattgtactagtttctcgatgagaggtgtcgtcaataactgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaag |
7193239 |
T |
|
| Q |
601 |
aaggacattgcttggctttaaatcacaatgaatgatcgattgctcacattcaagatgaaggtaatgtaatacaaaggcaatatcaacagcgatattcaat |
700 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7193238 |
aaggacattgcttggctttagatcacaatgaatgatcgattgctcacattcaagatgaaggtaatgtaatacaaaggcaatatcaacagcgatattcaat |
7193139 |
T |
|
| Q |
701 |
ctttgatcaaggtccaacgttctctgcttctc |
732 |
Q |
| |
|
||||||||||||||||||||||| || ||||| |
|
|
| T |
7193138 |
ctttgatcaaggtccaacgttctttgattctc |
7193107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 1 - 718
Target Start/End: Original strand, 10659463 - 10660178
Alignment:
| Q |
1 |
tttttgattatgcttaagtctctgatgacatccactatattcattctttcttttggtgattccactgaacaagcaagtccaatcctaaaaagtgaaacta |
100 |
Q |
| |
|
||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
10659463 |
tttttgattatgcttaactctctggtgacatcaactatattcattctttcttttggtgatttcactgaacatgcaagtccaatccgaaaaagtgaaacta |
10659562 |
T |
|
| Q |
101 |
cgcacttctctacatttggagtgaaatttccactgtttccatcttctattgttgcttctatatttcttggtacaagatttgggtccaaaatatgtataag |
200 |
Q |
| |
|
|||||||||||| |||||| |||||||||||| ||||| ||||||||| | |||||| ||||||||||||||||| |||||||||||| |||| || |
|
|
| T |
10659563 |
agcacttctctacgattggagggaaatttccactctttccttcttctattttggcttcttcatttcttggtacaagatgtgggtccaaaatctgtaaaat |
10659662 |
T |
|
| Q |
201 |
attattaggcaacgaaatttcaacaaaaatacgtagattttgaccattgtcaaacatttcatctaccggtctccttccggtaagaatttccaacaaaagc |
300 |
Q |
| |
|
|||||| || || |||||||||||||| ||| | ||||||||||| | |||||||||||||| ||||| ||||||||||| |||||||||| |||| |
|
|
| T |
10659663 |
attatttggaaatgaaatttcaacaaatatatgcagattttgaccctcttcaaacatttcatccgttggtcttcttccggtaagcatttccaacagaagc |
10659762 |
T |
|
| Q |
301 |
atcccgaagctatacatatcaccatatgtagatacttcagaacccattccatattctacaagataaagcaaaaacatttaataaaccctaactagtagaa |
400 |
Q |
| |
|
| ||||||||||||||| ||||||| ||| |||| ||||||||||||||||| |||| ||||| ||| ||||| |||||| ||||||||| || |
|
|
| T |
10659763 |
accccgaagctatacatgtcaccatgtgtggatatctcagaacccattccatactctaaaagat-aagaaaaaaacgttaatactatgtaactagtaaaa |
10659861 |
T |
|
| Q |
401 |
tatcaaacataaactaaaagataggagaattcaatgaaacaccaagtgatttaagagtctataaaaatacctggaggagcatagccaatagtccctttaa |
500 |
Q |
| |
|
|||||||||||||| |||| ||||||| |||||||||||||| || |||| ||||||| || ||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
10659862 |
tatcaaacataaacaaaaatataggaggattcaatgaaacacaaaatgatctaagagtata-gaaaatacctggaggagcatagccaacagtccctttaa |
10659960 |
T |
|
| Q |
501 |
ttccaattgtactagtttctcgatgagaggtgtcgtcaataactgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaag |
600 |
Q |
| |
|
|||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10659961 |
ttccaattgtactaaattccttgtgagaggtatcgtcaatggctgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaag |
10660060 |
T |
|
| Q |
601 |
aaggacattgcttggctttaaatcacaatgaatgatcgattgctcacattcaagatgaaggtaatgtaatacaaaggcaatatcaacagcgatattcaat |
700 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||| || |||||||||||| |||||||||||||||||||| ||||| |||||| |||||||| | |
|
|
| T |
10660061 |
aaggacattacttggctttagatcacaatgaatgaccgcttgctcacattcgtgatgaaggtaatgtaatacactagcaatgtcaacaatgatattcagt |
10660160 |
T |
|
| Q |
701 |
ctttgatcaaggtccaac |
718 |
Q |
| |
|
| |||||||||||||||| |
|
|
| T |
10660161 |
cgttgatcaaggtccaac |
10660178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 1 - 723
Target Start/End: Original strand, 10651580 - 10652300
Alignment:
| Q |
1 |
tttttgattatgcttaagtctctgatgacatccactatattcattctttcttttggtgattccactgaacaagcaagtccaatcctaaaaagtgaaacta |
100 |
Q |
| |
|
||||| || |||| ||| ||||| ||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
10651580 |
ttttttatcatgcctaactctctcatgacattaactatgttcattctttcttttggtgatttcactgaacaagcaagtccaatcctgaaaagtgaaacta |
10651679 |
T |
|
| Q |
101 |
cgcacttctctacatttggagtgaaatttccactgtttccatcttctattgttgcttctatatttcttggtacaagatttgggtccaaaatatgtataag |
200 |
Q |
| |
|
|||||||||||| |||||||||||||||||| |||||| ||||||||| | ||||| ||||||||||||||||| ||| |||||||| ||||||| |
|
|
| T |
10651680 |
aacacttctctacagttggagtgaaatttccacagtttccttcttctatttcttcttcttcatttcttggtacaagatgtggatccaaaatctgtataat |
10651779 |
T |
|
| Q |
201 |
attattaggcaacgaaatttcaacaaaaatacgtagattttgaccattgtcaaacatttcatctaccggtctccttccggtaagaatttccaacaaaagc |
300 |
Q |
| |
|
||||||||| || |||||| ||||||| ||| | | ||||||||| | ||||||||| ||||| ||||| ||||||||||| |||||||||| |||| |
|
|
| T |
10651780 |
attattaggaaatgaaattccaacaaacatatgcaaattttgaccttcttcaaacattccatctgttggtcttcttccggtaagcatttccaacataagc |
10651879 |
T |
|
| Q |
301 |
atcccgaagctatacatatcaccatatgtagatacttcagaacccattccatattctacaagataaagcaaaaacatttaataaaccctaactagtagaa |
400 |
Q |
| |
|
| ||||||||||||||| ||||||||||| |||| |||||||||||||||||| |||| |||||||| || |||||||||||| ||| ||||| || |
|
|
| T |
10651880 |
accccgaagctatacatgtcaccatatgtggatatttcagaacccattccatactctaaaagataaaacagaaacatttaatactatgtaattagtaaaa |
10651979 |
T |
|
| Q |
401 |
tatcaaacataaactaaaagataggagaattcaatgaaacaccaagtgatttaagagtctataaaaatacctggaggagcatagccaatagtccctttaa |
500 |
Q |
| |
|
||| |||||||| | ||||||||| ||||||| |||| || || |||| ||| ||| || ||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
10651980 |
tatataacataaatcataagataggaaaattcaaagaaa-actaaatgatctaaaagtata-gaaagtacctggaggagcatagccaacagtccctttaa |
10652077 |
T |
|
| Q |
501 |
ttccaattgtactagtttctcgatgagaggtgtcgtcaataactgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaag |
600 |
Q |
| |
|
||||||||||||||||||| | |||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
10652078 |
ttccaattgtactagtttccttgttagaggtattgtcaatggctgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcgtcatcaag |
10652177 |
T |
|
| Q |
601 |
aaggacattgcttggctttaaatcacaatgaatgatcgattgctcacattcaagatgaaggtaatgtaatacaaaggcaatatcaacagcgatattcaat |
700 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||| || ||||||||||||| |||||||||||||||||||| | ||||| |||||| |||||||| | |
|
|
| T |
10652178 |
aaggacattacttggctttagatcacaatgaatgaccgcttgctcacattcatgatgaaggtaatgtaatacagaagcaatgtcaacaatgatattcagt |
10652277 |
T |
|
| Q |
701 |
ctttgatcaaggtccaacgttct |
723 |
Q |
| |
|
| |||||||||||||||| |||| |
|
|
| T |
10652278 |
cgttgatcaaggtccaacattct |
10652300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 160; E-Value: 7e-85
Query Start/End: Original strand, 468 - 723
Target Start/End: Original strand, 10588273 - 10588528
Alignment:
| Q |
468 |
tacctggaggagcatagccaatagtccctttaattccaattgtactagtttctcgatgagaggtgtcgtcaataactgagacaagtcttgctatgccaaa |
567 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
10588273 |
tacctggaggagcatagccaacagtccctttaattccaattgtactagtttcctgatgagatgtgtcttcaataactgagacaagtcttgctatgccaaa |
10588372 |
T |
|
| Q |
568 |
atcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatcacaatgaatgatcgattgctcacattcaagatgaaggtaatgt |
667 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| || | |||||||||||| ||||||| |||||| |
|
|
| T |
10588373 |
atcactcacatgagcaaccatgtcatcgtcaagaaggacgttgcttggctttatatcacaatgaaggaccacctgctcacattcatgatgaagataatgt |
10588472 |
T |
|
| Q |
668 |
aatacaaaggcaatatcaacagcgatattcaatctttgatcaaggtccaacgttct |
723 |
Q |
| |
|
| | || | |||||||| | || |||||| ||||| ||| |||||||||||||||| |
|
|
| T |
10588473 |
agtgcagaagcaatatcgatagtgatatttaatctatgaacaaggtccaacgttct |
10588528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 28 - 670
Target Start/End: Complemental strand, 10612515 - 10611874
Alignment:
| Q |
28 |
acatccactatattcattctttcttttggtgattccactgaacaagcaagtccaatcctaaaaagtgaaactacgcacttctctacatttggagtgaaat |
127 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||| ||||| || || | ||||| | | || |
|
|
| T |
10612515 |
acatccacaatattcattctttctttgggtgattccattgaacaaagaagtccaatcctaaaaagtgaaactaagcactcctttaaacttggaataagat |
10612416 |
T |
|
| Q |
128 |
ttccactgtttccatcttctattgttgcttctatatttcttggtacaagatttgggtccaaaatatgtataagattattaggcaacgaaatttcaacaaa |
227 |
Q |
| |
|
| |||| |||||||||| |||| | ||||| || | ||| ||||||| ||||||||| || | |||||||||| ||| ||| || ||||||| |
|
|
| T |
10612415 |
tctcactctttccatcttgtatttctacttctgcatattttgacacaagatgtgggtccaagatctttataagattagcaggaaacagtgttgcaacaaa |
10612316 |
T |
|
| Q |
228 |
aatacgtagattttgaccattgtcaaacatttcatctaccggtctccttccggtaagaatttccaacaaaagcatcccgaagctatacatatcaccatat |
327 |
Q |
| |
|
|| ||||||||||| ||| ||||| ||||| ||||| || |||||||| |||||||||| ||| || || |||||||||||||||||| || |
|
|
| T |
10612315 |
gttatgtagattttgatcatcttcaaatgcctcatcagtgggtcttctaccggtaagcatttccaacataaggattccaaagctatacatatcaccacat |
10612216 |
T |
|
| Q |
328 |
gtagatacttcagaacccattccatattctacaagataaagcaaaaacatttaataaaccctaactagtagaatatcaaacataaactaaaagataggag |
427 |
Q |
| |
|
|| |||||||||| |||||| ||||| |||| || || ||||||| | |||||| | ||||||| || || || || || |||| |||||| |
|
|
| T |
10612215 |
gtggatacttcagcacccatcccatactctaaaacatgtagcaaaagctattaatacaatgccactagtaaaacattaagtttacacaaaaacataggaa |
10612116 |
T |
|
| Q |
428 |
aattcaatgaaac-accaagtgatttaagagtctataaaaatacctggaggagcatagccaatagtccctttaattccaattgtactagt-ttctcgatg |
525 |
Q |
| |
|
||||||| ||||| | ||| | || | || | || || | ||||||||||||||||||||| ||||||||||||||||||||| |||| |||| ||| |
|
|
| T |
10612115 |
aattcaaagaaacgatcaaagg-ttcatgaatttagaaca-tacctggaggagcatagccaacagtccctttaattccaattgtcttagtattctt-atg |
10612019 |
T |
|
| Q |
526 |
agaggtgtcgtcaataactgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatca |
625 |
Q |
| |
|
||||| | |||| | ||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||||||||||||||||| |||| |
|
|
| T |
10612018 |
agaggaaccaccaatggccgagacaagtcttgctatgccaaaatcactcacatgtgcaaccatatcatcatcaagtaggacattgcttggctttatatca |
10611919 |
T |
|
| Q |
626 |
caatgaatgatcgattgctcacattcaagatgaaggtaatgtaat |
670 |
Q |
| |
|
||||||| || | |||||||||||||| |||||| ||||||||| |
|
|
| T |
10611918 |
caatgaaggaccaattgctcacattcattatgaagataatgtaat |
10611874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 467 - 670
Target Start/End: Original strand, 10740541 - 10740744
Alignment:
| Q |
467 |
atacctggaggagcatagccaatagtccctttaattccaattgtactagtttctcgatgagaggtgtcgtcaataactgagacaagtcttgctatgccaa |
566 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||| |||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
10740541 |
atacctggaggagcatagccaacagttccttttattccaattgtactagtttccttgtgagaggtatcgtcaatggctgagacaagtcttgctatgccaa |
10740640 |
T |
|
| Q |
567 |
aatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatcacaatgaatgatcgattgctcacattcaagatgaaggtaatg |
666 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| || | |||| |||||||| | ||||| ||||| |
|
|
| T |
10740641 |
aatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggctttagatcacaatgaaggaccaattgttcacattcttggtgaagataatg |
10740740 |
T |
|
| Q |
667 |
taat |
670 |
Q |
| |
|
|||| |
|
|
| T |
10740741 |
taat |
10740744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 172 - 412
Target Start/End: Original strand, 10588008 - 10588248
Alignment:
| Q |
172 |
acaagatttgggtccaaaatatgtataagattattaggcaacgaaatttcaacaaaaatacgtagattttgaccattgtcaaacatttcatctaccggtc |
271 |
Q |
| |
|
||||||| |||||||||||| ||||||||||||| | || ||| |||||||||| ||| ||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
10588008 |
acaagatgtgggtccaaaatctgtataagattatcttgaaatgaactttcaacaaacatatgtagattttgaccatcttcaaacatttcatctgtgggtc |
10588107 |
T |
|
| Q |
272 |
tccttccggtaagaatttccaacaaaagcatcccgaagctatacatatcaccatatgtagatacttcagaacccattccatattctacaagataaagcaa |
371 |
Q |
| |
|
| |||||||| | |||||||||| ||||||||| ||||||||||| |||||| |||| ||||||||||||||||||||||| |||||||||| |||||| |
|
|
| T |
10588108 |
ttcttccggtgatcatttccaacataagcatcccaaagctatacatgtcaccagatgtggatacttcagaacccattccatactctacaagattaagcaa |
10588207 |
T |
|
| Q |
372 |
aaacatttaataaaccctaactagtagaatatcaaacataa |
412 |
Q |
| |
|
|| ||||||||| | ||||||||||||| ||||| |||| |
|
|
| T |
10588208 |
aagcatttaatactctataactagtagaatgtcaaatataa |
10588248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 26 - 670
Target Start/End: Original strand, 10746434 - 10747060
Alignment:
| Q |
26 |
tgacatccactatattcattctttcttttggtgattccactgaacaagcaagtccaatcctaaaaagtgaaactacgcacttctctacatttggagtgaa |
125 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| | || |||| |||||||||||||||||||||||||| |||| | |||| ||||| | | |
|
|
| T |
10746434 |
tgacatccacagtattcattctttcttttggtgattcaattgtacaaataagtccaatcctaaaaagtgaaactaaacactcttttacagttggaataag |
10746533 |
T |
|
| Q |
126 |
atttccactgtttccatcttctattgttgcttctatatttcttggtacaagatttgggtccaaaatatgtataagattattaggcaacgaaatttcaaca |
225 |
Q |
| |
|
||| || ||||||||||||||| || || ||||| || ||||| |||||||| |||| ||||||||||| ||| ||||| ||| ||||| |
|
|
| T |
10746534 |
attctcattgtttccatcttctactgc---------atctcttgatagaagatgcgggtccaagatatttataagattatcaggaaacgatattgcaaca |
10746624 |
T |
|
| Q |
226 |
aaaatacgtagattttgaccattgtcaaacatttcatctaccggtctccttccggtaagaatttccaacaaaagcatcccgaagctatacatatcaccat |
325 |
Q |
| |
|
|| || | ||||||||||||| ||||| | |||||| ||||| || || ||||| ||||||| || ||| || || ||||||||||||||||||| |
|
|
| T |
10746625 |
aagttatgcagattttgaccatcttcaaaaacttcatcagtgggtcttctaccagtaagcatttccagcataaggattccaaagctatacatatcaccat |
10746724 |
T |
|
| Q |
326 |
atgtagatacttcagaacccattccatattctacaagataaagcaaaaacatttaataaaccctaactagtagaatatcaaacataaactaaaagatagg |
425 |
Q |
| |
|
|||| || |||||||||||||||||||| |||| || || ||||||| | |||||| | |||||| ||||| ||| ||||| |||| ||||| |
|
|
| T |
10746725 |
atgtggacacttcagaacccattccatactctaaaacatgtagcaaaagctattaatacgatgtccctagtataatattaaatctaaaccaaaacatagg |
10746824 |
T |
|
| Q |
426 |
agaattcaatgaaacaccaagtgatttaagagtctataaaa---atacctggaggagcatagccaatagtccctttaattccaattgtactagtttctcg |
522 |
Q |
| |
|
|| |||||| |||||| || | |||| | || || | |||||||||||||||||||||| ||| ||||| ||||||||||||||||| | | |
|
|
| T |
10746825 |
agtattcaaagaaacaatggaagactcaagaatttagaacatatatacctggaggagcatagccaacagttccttttattccaattgtactagtattgcc |
10746924 |
T |
|
| Q |
523 |
atgagaggtgtcgtcaataactgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaa |
622 |
Q |
| |
|
| || || ||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| | | |
|
|
| T |
10746925 |
actagtgg------------ctgagacaagttttgctatgccaaaatcagtcacatgagcaaccatgtcatcatcaagaaggacattgcttggcttgaga |
10747012 |
T |
|
| Q |
623 |
tcacaatgaatgatcgattgctcacattcaagatgaaggtaatgtaat |
670 |
Q |
| |
|
||||| ||||||| ||||||||||||| | ||||| ||||||||| |
|
|
| T |
10747013 |
tcacagtgaatgactaattgctcacattcttggtgaagataatgtaat |
10747060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 28 - 358
Target Start/End: Original strand, 9835733 - 9836063
Alignment:
| Q |
28 |
acatccactatattcattctttcttttggtgattccactgaacaagcaagtccaatcctaaaaagtgaaactacgcacttctctacatttggagtgaaat |
127 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||| |||||| |||||||||||||| |||| |||||||| ||| |||| |||| |||| | | || |
|
|
| T |
9835733 |
acatctactatgttcattctttcttttggtgattctcttgaacaggcaagtccaatccttaaaactgaaactaagcaattctttacagctggaataagat |
9835832 |
T |
|
| Q |
128 |
ttccactgtttccatcttctattgttgcttctatatttcttggtacaagatttgggtccaaaatatgtataagattattaggcaacgaaatttcaacaaa |
227 |
Q |
| |
|
| |||| |||||||||||||||| ||||||| || ||||||||||| || | |||||||||| ||| ||||||| || || ||| ||||| |||| |
|
|
| T |
9835833 |
tctcactatttccatcttctattgctgcttcttcatctcttggtacaaaatgttggtccaaaatctgtgaaagattaccagctaatgaactttcagcaaa |
9835932 |
T |
|
| Q |
228 |
aatacgtagattttgaccattgtcaaacatttcatctaccggtctccttccggtaagaatttccaacaaaagcatcccgaagctatacatatcaccatat |
327 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||| ||||| ||||| |||| |||||||||| |||||||| ||||||||||| ||||||||| |
|
|
| T |
9835933 |
cgtacgtagattttgaccatcctcaaatctttcatctgtaggtcttcttccagtaatcatttccaacacgagcatcccaaagctatacatgtcaccatat |
9836032 |
T |
|
| Q |
328 |
gtagatacttcagaacccattccatattcta |
358 |
Q |
| |
|
|| ||| ||||||||||||||||||| |||| |
|
|
| T |
9836033 |
gttgatgcttcagaacccattccatactcta |
9836063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 467 - 717
Target Start/End: Original strand, 10762975 - 10763225
Alignment:
| Q |
467 |
atacctggaggagcatagccaatagtccctttaattccaattgtactagtttctcgatgagaggtgtcgtcaataactgagacaagtcttgctatgccaa |
566 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||| |||||| ||||||||||||| | ||||||| |||| || || ||||||||||| |||| |
|
|
| T |
10762975 |
atacctggaggagcatagccaacagttccttttattccagttgtactagtttccttaagagaggtacaagcaatggcttgaactagtcttgctattccaa |
10763074 |
T |
|
| Q |
567 |
aatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatcacaatgaatgatcgattgctcacattcaagatgaaggtaatg |
666 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| || | ||||||||||||| ||||||| ||||| |
|
|
| T |
10763075 |
aatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggctttagatcacaatgaaggaccaattgctcacattctcgatgaagataatg |
10763174 |
T |
|
| Q |
667 |
taatacaaaggcaatatcaacagcgatattcaatctttgatcaaggtccaa |
717 |
Q |
| |
|
|||| || | |||| ||||| | |||||||| |||||||||||| ||||| |
|
|
| T |
10763175 |
taatgcagaagcaacatcaataatgatattcagtctttgatcaagatccaa |
10763225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 469 - 670
Target Start/End: Original strand, 19605709 - 19605910
Alignment:
| Q |
469 |
acctggaggagcatagccaatagtccctttaattccaattgtactagtttctcgatgagaggtgtcgtcaataactgagacaagtcttgctatgccaaaa |
568 |
Q |
| |
|
||||||||||||||||||||| |||||||| ||||||||||| ||||||||| || |||| | | |||| | || ||||||||||||||||||||| |
|
|
| T |
19605709 |
acctggaggagcatagccaatggtcccttttattccaattgtgctagtttcttgacaagagttattgtcagcagaagatacaagtcttgctatgccaaaa |
19605808 |
T |
|
| Q |
569 |
tcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatcacaatgaatgatcgattgctcacattcaagatgaaggtaatgta |
668 |
Q |
| |
|
||||||||||| ||||| || || ||||||| |||||||||||||||||||| ||||||||||| || | |||||||||||||| ||||||||||||||| |
|
|
| T |
19605809 |
tcactcacatgtgcaacgatatcgtcgtcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacattcatgatgaaggtaatgta |
19605908 |
T |
|
| Q |
669 |
at |
670 |
Q |
| |
|
|| |
|
|
| T |
19605909 |
at |
19605910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 467 - 717
Target Start/End: Complemental strand, 10559269 - 10559019
Alignment:
| Q |
467 |
atacctggaggagcatagccaatagtccctttaattccaattgtactagtttctcgatgagaggtgtcgtcaataactgagacaagtcttgctatgccaa |
566 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| ||||||||||| |||||||| | |||| | |||| | |||||| |||||||||||||||| |
|
|
| T |
10559269 |
atacctggaggagcatagccaacagtcccttttattccaattgtgctagtttccttaggagatataccgtccgcagatgagacgagtcttgctatgccaa |
10559170 |
T |
|
| Q |
567 |
aatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatcacaatgaatgatcgattgctcacattcaagatgaaggtaatg |
666 |
Q |
| |
|
||||||||||||||||||| |||| || |||| |||||||||||||||||||| ||||||||||| || | ||||||||||||| ||||||| ||||| |
|
|
| T |
10559169 |
aatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacattctcgatgaagataatg |
10559070 |
T |
|
| Q |
667 |
taatacaaaggcaatatcaacagcgatattcaatctttgatcaaggtccaa |
717 |
Q |
| |
|
|||| || | |||| ||||| | |||||||| |||||||| ||| ||||| |
|
|
| T |
10559069 |
taatgcagaagcaacatcaataatgatattcagtctttgattaagatccaa |
10559019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 467 - 721
Target Start/End: Complemental strand, 10605119 - 10604865
Alignment:
| Q |
467 |
atacctggaggagcatagccaatagtccctttaattccaattgtactagtttctcgatgagaggtgtcgtcaataactgagacaagtcttgctatgccaa |
566 |
Q |
| |
|
||||||||||||||||| |||| ||| ||||| || |||||||||||||| | | ||||||||| | |||| ||||| |||||||||||||||| |
|
|
| T |
10605119 |
atacctggaggagcatatccaacagttccttttatcccaattgtactagtatttatatgagaggtaccaccaatggacgagaccagtcttgctatgccaa |
10605020 |
T |
|
| Q |
567 |
aatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatcacaatgaatgatcgattgctcacattcaagatgaaggtaatg |
666 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||||| ||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||| ||||| |
|
|
| T |
10605019 |
aatcactcacatgagcaaccatatcatcatcaagtaggacattgcttggctttagatcacaatgaatgactaattgctcacattcttgatgaagataatg |
10604920 |
T |
|
| Q |
667 |
taatacaaaggcaatatcaacagcgatattcaatctttgatcaaggtccaacgtt |
721 |
Q |
| |
|
||| || | |||| ||||| | ||| || ||||||| | |||||||||||||| |
|
|
| T |
10604919 |
caatgcagaagcaacatcaaaaatgatgttaaatcttttaccaaggtccaacgtt |
10604865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 467 - 723
Target Start/End: Original strand, 9836170 - 9836426
Alignment:
| Q |
467 |
atacctggaggagcatagccaatagtccctttaattccaattgtactagtttctcgatgagaggtgtcgtcaataactgagacaagtcttgctatgccaa |
566 |
Q |
| |
|
|||||||| |||||||||||||| |||||| ||| | ||||||||||||| ||||||||| ||||||| |||||| ||||||||||||||||| |
|
|
| T |
9836170 |
atacctgggggagcatagccaatggtccctgatattgtagttgtactagtttccttatgagaggtaccgtcaatggctgagataagtcttgctatgccaa |
9836269 |
T |
|
| Q |
567 |
aatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatcacaatgaatgatcgattgctcacattcaagatgaaggtaatg |
666 |
Q |
| |
|
|||||||||| ||||||||||||| ||| || ||||||| ||||||||||| | |||||||||||||| | ||||||||||||| |||||| ||||| |
|
|
| T |
9836270 |
aatcactcacgtgagcaaccatgttatcatcgagaaggatgttgcttggcttgatatcacaatgaatgaccacttgctcacattcacaatgaagataatg |
9836369 |
T |
|
| Q |
667 |
taatacaaaggcaatatcaacagcgatattcaatctttgatcaaggtccaacgttct |
723 |
Q |
| |
|
|||| || | |||||||||| | |||||| | ||||||| |||||| ||| ||||| |
|
|
| T |
9836370 |
taatgcagaagcaatatcaatggagatatttagtctttgaacaaggttcaatgttct |
9836426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 463 - 670
Target Start/End: Original strand, 10716778 - 10716985
Alignment:
| Q |
463 |
aaaaatacctggaggagcatagccaatagtccctttaattccaattgtactagtttctcgatgagaggtgtcgtcaataactgagacaagtcttgctatg |
562 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||| ||||||| |||||| || || || |||||| | ||||| | ||||||||| |||||||| |
|
|
| T |
10716778 |
aaaaatacctgggggagcatagccaatgctcccttttattccaactgtactggtatccttatcagaggtaatgccaatatccgagacaagttttgctatg |
10716877 |
T |
|
| Q |
563 |
ccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatcacaatgaatgatcgattgctcacattcaagatgaaggt |
662 |
Q |
| |
|
||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| |||| |||||||| | ||||| | |
|
|
| T |
10716878 |
ccaaaatcagtcacatgagcaaccatgtcatcatcaagaaggacattgcttggcttaagatcacaatgaatgattaattgttcacattcttggtgaagat |
10716977 |
T |
|
| Q |
663 |
aatgtaat |
670 |
Q |
| |
|
|||||||| |
|
|
| T |
10716978 |
aatgtaat |
10716985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 28 - 329
Target Start/End: Original strand, 9827364 - 9827665
Alignment:
| Q |
28 |
acatccactatattcattctttcttttggtgattccactgaacaagcaagtccaatcctaaaaagtgaaactacgcacttctctacatttggagtgaaat |
127 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||| |||||| |||||||||||||| |||| |||||||| ||| |||| |||| |||| | | || |
|
|
| T |
9827364 |
acatctactatgttcattctttcttttggtgattctcttgaacaggcaagtccaatccttaaaactgaaactaagcaattctttacagctggaataagat |
9827463 |
T |
|
| Q |
128 |
ttccactgtttccatcttctattgttgcttctatatttcttggtacaagatttgggtccaaaatatgtataagattattaggcaacgaaatttcaacaaa |
227 |
Q |
| |
|
| |||| |||||||||||||||| ||||||| || ||||||||||| || | ||| |||||| ||| |||||||| || || ||| ||||| |||| |
|
|
| T |
9827464 |
tctcactatttccatcttctattgctgcttcttcatctcttggtacaaaatgttggttcaaaatctgtgaaagattatcagctaatgaactttcagcaaa |
9827563 |
T |
|
| Q |
228 |
aatacgtagattttgaccattgtcaaacatttcatctaccggtctccttccggtaagaatttccaacaaaagcatcccgaagctatacatatcaccatat |
327 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||| ||||| ||||| |||| |||||||||| |||||||| ||||||||||| ||||||||| |
|
|
| T |
9827564 |
cgtacgtagattttgaccatcctcaaatctttcatctgtaggtcttcttccagtaatcatttccaacacgagcatcccaaagctatacatgtcaccatat |
9827663 |
T |
|
| Q |
328 |
gt |
329 |
Q |
| |
|
|| |
|
|
| T |
9827664 |
gt |
9827665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 537 - 670
Target Start/End: Complemental strand, 10565324 - 10565191
Alignment:
| Q |
537 |
caataactgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatcacaatgaatgat |
636 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
10565324 |
caatagctgagacgagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggatattgcttggctttagatcacaatgaatgac |
10565225 |
T |
|
| Q |
637 |
cgattgctcacattcaagatgaaggtaatgtaat |
670 |
Q |
| |
|
| ||| |||||||| |||||| ||||||||| |
|
|
| T |
10565224 |
caattcttcacattctctatgaagataatgtaat |
10565191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 543 - 670
Target Start/End: Original strand, 11048575 - 11048702
Alignment:
| Q |
543 |
ctgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatcacaatgaatgatcgattg |
642 |
Q |
| |
|
||||||||||| |||| |||||||||||||||||||||||||||||||| |||| |||||| ||||| |||||||||| |||||||||||| ||| |||| |
|
|
| T |
11048575 |
ctgagacaagttttgcaatgccaaaatcactcacatgagcaaccatgtcgtcgttaagaagaacattacttggctttagatcacaatgaataatcaattg |
11048674 |
T |
|
| Q |
643 |
ctcacattcaagatgaaggtaatgtaat |
670 |
Q |
| |
|
||||||||| |||| || ||||||||| |
|
|
| T |
11048675 |
ctcacattcttgatgcagataatgtaat |
11048702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 544 - 670
Target Start/End: Original strand, 10216668 - 10216794
Alignment:
| Q |
544 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatcacaatgaatgatcgattgc |
643 |
Q |
| |
|
|||||||| | |||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||| |||||||||||| ||| ||||| |
|
|
| T |
10216668 |
tgagacaaatgttgctatgccaaaatcactcacatgagcaaccatgtcatcattcagaagaacattgcttggctttagatcacaatgaataatcaattgc |
10216767 |
T |
|
| Q |
644 |
tcacattcaagatgaaggtaatgtaat |
670 |
Q |
| |
|
|||||||| |||| || ||||||||| |
|
|
| T |
10216768 |
tcacattcttgatgcagataatgtaat |
10216794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 28 - 353
Target Start/End: Complemental strand, 10605557 - 10605232
Alignment:
| Q |
28 |
acatccactatattcattctttcttttggtgattccactgaacaagcaagtccaatcctaaaaagtgaaactacgcacttctctacatttggagtgaaat |
127 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||||| ||||||| ||||||||| |||||||||||||||| | | | |||||| ||||| | | || |
|
|
| T |
10605557 |
acatccataatattcattctttctttcggtgattccattgaacaaataagtccaattctaaaaagtgaaactaaggattcctctacccttggaataagat |
10605458 |
T |
|
| Q |
128 |
ttccactgtttccatcttctattgttgcttctatatttcttggtacaagatttgggtccaaaatatgtataagattattaggcaacgaaatttcaacaaa |
227 |
Q |
| |
|
| | |||||||| |||||||| | |||||| || ||||| |||||| | |||||||||||| | | ||| ||||| ||| || ||| || ||||||| |
|
|
| T |
10605457 |
tcgtatggtttccattttctattgctacttctacatctcttgttacaaggtgtgggtccaaaatctctttaatattatcaggaaatgaagttgcaacaaa |
10605358 |
T |
|
| Q |
228 |
aatacgtagattttgaccattgtcaaacatttcatctaccggtctccttccggtaagaatttccaacaaaagcatcccgaagctatacatatcaccatat |
327 |
Q |
| |
|
|| | ||||||||||||| | ||| | |||||| |||||||| || ||||| |||||||||| || || || ||||||||||| |||||| || |
|
|
| T |
10605357 |
gttatgcagattttgaccatcttgaaaaacttcatcagtgggtctcctaccagtaagtatttccaacatcaggattccaaagctatacatgtcaccacat |
10605258 |
T |
|
| Q |
328 |
gtagatacttcagaacccattccata |
353 |
Q |
| |
|
|||| |||||||||||||||||||| |
|
|
| T |
10605257 |
atagacacttcagaacccattccata |
10605232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 28 - 358
Target Start/End: Original strand, 10739830 - 10740160
Alignment:
| Q |
28 |
acatccactatattcattctttcttttggtgattccactgaacaagcaagtccaatcctaaaaagtgaaactacgcacttctctacatttggagtgaaat |
127 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||||| ||||||| ||||||||| |||||||||||||||| | | | |||||| ||| | | |
|
|
| T |
10739830 |
acatccataatattcattctttctttcggtgattccattgaacaaataagtccaattctaaaaagtgaaactaaggattcctctaccccaggaactagaa |
10739929 |
T |
|
| Q |
128 |
ttccactgtttccatcttctattgttgcttctatatttcttggtacaagatttgggtccaaaatatgtataagattattaggcaacgaaatttcaacaaa |
227 |
Q |
| |
|
| | | ||||||||||| ||||||| |||||| || ||||| | |||||| |||||||||||| | ||||| ||| ||| |||||| || | ||||| |
|
|
| T |
10739930 |
tcgctcggtttccatcttgtattgttacttctacatctcttgcttcaagatgtgggtccaaaatctctataatgttaccaggaaacgaagttgctacaaa |
10740029 |
T |
|
| Q |
228 |
aatacgtagattttgaccattgtcaaacatttcatctaccggtctccttccggtaagaatttccaacaaaagcatcccgaagctatacatatcaccatat |
327 |
Q |
| |
|
|| ||||||||||||||| | ||| | |||||| ||||| || |||||||| |||||||||| ||| || || ||||||||||| |||||| || |
|
|
| T |
10740030 |
gttatgtagattttgaccatcttgaaaaacttcatcagtgggtcttctaccggtaagtatttccaacataaggattccaaagctatacatgtcaccagat |
10740129 |
T |
|
| Q |
328 |
gtagatacttcagaacccattccatattcta |
358 |
Q |
| |
|
|| || |||||||||||||||||||| |||| |
|
|
| T |
10740130 |
gttgacacttcagaacccattccatactcta |
10740160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 26 - 358
Target Start/End: Complemental strand, 10559705 - 10559373
Alignment:
| Q |
26 |
tgacatccactatattcattctttcttttggtgattccactgaacaagcaagtccaatcctaaaaagtgaaactacgcacttctctacatttggagtgaa |
125 |
Q |
| |
|
||||||||| |||||||||||||| | |||| |||||||| ||||| ||||||||||||||||| |||||||||| | | || | || || | | | |
|
|
| T |
10559705 |
tgacatccaatatattcattctttgtgttggcgattccaccgaacatgcaagtccaatcctaaagagtgaaactaaggatttatgtattaatgaaataag |
10559606 |
T |
|
| Q |
126 |
atttccactgtttccatcttctattgttgcttctatatttcttggtacaagatttgggtccaaaatatgtataagattattaggcaacgaaatttcaaca |
225 |
Q |
| |
|
||| || ||| ||||||||||| |||||| | ||||||||||| || |||||||||||| || |||| ||||||||| || ||| |||||||| |
|
|
| T |
10559605 |
attcttcttgcttctatcttctattgctgcttcctcttctcttggtacaatatgtgggtccaaaatctgcataacattattaggaaatgaattttcaaca |
10559506 |
T |
|
| Q |
226 |
aaaatacgtagattttgaccattgtcaaacatttcatctaccggtctccttccggtaagaatttccaacaaaagcatcccgaagctatacatatcaccat |
325 |
Q |
| |
|
| | | | ||||||||||||| |||||||||||| ||||| ||||| |||| |||||||| | ||||||||| ||||||||||| ||||||| |
|
|
| T |
10559505 |
tacaaatgcagattttgaccatctaaaaacatttcatcagttggtcttcttcctgtaatcatttccaatataagcatcccaaagctatacatgtcaccat |
10559406 |
T |
|
| Q |
326 |
atgtagatacttcagaacccattccatattcta |
358 |
Q |
| |
|
||| || |||||||||||||||||||| |||| |
|
|
| T |
10559405 |
gtgtggaaacttcagaacccattccatactcta |
10559373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 35 - 358
Target Start/End: Original strand, 19605278 - 19605601
Alignment:
| Q |
35 |
ctatattcattctttcttttggtgattccactgaacaagcaagtccaatcctaaaaagtgaaactacgcacttctctacatttggagtgaaatttccact |
134 |
Q |
| |
|
||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||| ||||| | ||| || || | ||| | | | || | | | |
|
|
| T |
19605278 |
ctatattcattctttctttgggagattccatcgaacaggcaagtccaatcctaaaaatggaaacaaagcatttatccatcgttgaaataagatgccgatt |
19605377 |
T |
|
| Q |
135 |
gtttccatcttctattgttgcttctatatttcttggtacaagatttgggtccaaaatatgtataagattattaggcaacgaaatttcaacaaaaatacgt |
234 |
Q |
| |
|
| ||||||| ||||||||||||||| | ||||||||||| | ||||||||||| | |||| |||| ||| || |||||||||||| | | ||| |
|
|
| T |
19605378 |
gcttccatcatctattgttgcttcttcaactcttggtacaatacacgggtccaaaatcttcataatgttatcaggaaatgaaatttcaacatacaaacgc |
19605477 |
T |
|
| Q |
235 |
agattttgaccat-tgtcaaacatttcatctaccggtctccttccggtaagaatttccaacaaaagcatcccgaagctatacatatcaccatatgtagat |
333 |
Q |
| |
|
||||||||||||| ||| |||||| ||||| |||||| ||||| ||||| |||||||| | ||||||||| ||||||||||||||||||| ||| || |
|
|
| T |
19605478 |
agattttgaccatctgt-aaacatgtcatccgtcggtcttcttcccgtaagcatttccaatataagcatcccaaagctatacatatcaccatgtgtggaa |
19605576 |
T |
|
| Q |
334 |
acttcagaacccattccatattcta |
358 |
Q |
| |
|
|||||||||| ||||||||| |||| |
|
|
| T |
19605577 |
acttcagaactcattccatactcta |
19605601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 10587895 - 10587964
Alignment:
| Q |
41 |
tcattctttcttttggtgattccactgaacaagcaagtccaatcctaaaaagtgaaactacgcacttctc |
110 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||| ||||||||| |
|
|
| T |
10587895 |
tcattctttcttttggtgattccattgaacaagcaagtccaatccttagaagtgaaactaagcacttctc |
10587964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 10551606 - 10551518
Alignment:
| Q |
28 |
acatccactatattcattctttcttttggtgattccactgaacaagcaagtccaatcctaaaaagtgaaactacgcacttctctacatt |
116 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||| || || ||||||||||| |
|
|
| T |
10551606 |
acatcaaccatattcattctttcttttggtgattccactgaacaagaaagtgcaatcctaagaagtgaaagtaaacatttctctacatt |
10551518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 474 - 670
Target Start/End: Complemental strand, 10581356 - 10581167
Alignment:
| Q |
474 |
gaggagcatagccaatagtccctttaattccaattgtactagt-ttctcgatgagaggtgtcgtcaataactgagacaagtcttgctatgccaaaatcac |
572 |
Q |
| |
|
|||||||||||||||| || ||||| |||||| |||||||||| |||| ||||| ||| | ||| ||||||||||||||||| |||||||||||| |
|
|
| T |
10581356 |
gaggagcatagccaattgttccttttattccagttgtactagtattctt-atgagtggtaccacaaatggctgagacaagtcttgctgtgccaaaatcac |
10581258 |
T |
|
| Q |
573 |
tcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatcacaatgaatgatcgattgctcacattcaagatgaaggtaatgtaat |
670 |
Q |
| |
|
||||||| ||||||||||| |||||||| |||||||||||| ||||||| ||| || | ||||||||||||| ||||||| ||||||||| |
|
|
| T |
10581257 |
tcacatg----accatgtcatcatcaagaag---tgtgcttggctttagatcacaacgaaggaccaattgctcacattctcgatgaagataatgtaat |
10581167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 28 - 358
Target Start/End: Original strand, 10762245 - 10762575
Alignment:
| Q |
28 |
acatccactatattcattctttcttttggtgattccactgaacaagcaagtccaatcctaaaaagtgaaactacgcacttctctacatttggagtgaaat |
127 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||||| ||||||| ||||||||| |||||||||||||||| | | | |||||| || | | | | |
|
|
| T |
10762245 |
acatccataatattcattctttctttcggtgattccattgaacaaataagtccaattctaaaaagtgaaactaaggattcctctacccctgcaataagaa |
10762344 |
T |
|
| Q |
128 |
ttccactgtttccatcttctattgttgcttctatatttcttggtacaagatttgggtccaaaatatgtataagattattaggcaacgaaatttcaacaaa |
227 |
Q |
| |
|
| | | ||||||||||| | ||||| |||||| || ||||| | |||||| |||||||||||||| ||||| ||| ||| || ||| | | ||||| |
|
|
| T |
10762345 |
tcgctcggtttccatcttgttttgttacttctacatctcttgcttcaagatgtgggtccaaaatatctataatgttaccaggaaatgaagctgctacaaa |
10762444 |
T |
|
| Q |
228 |
aatacgtagattttgaccattgtcaaacatttcatctaccggtctccttccggtaagaatttccaacaaaagcatcccgaagctatacatatcaccatat |
327 |
Q |
| |
|
|| | ||||||||||||| | ||| | |||||| ||||| || || ||||| |||| ||||| ||| | || ||||||||||| |||||| || |
|
|
| T |
10762445 |
gttatgcagattttgaccatcttgaaaaacttcatcagtgggtcttctaccagtaagtattttcaacataaggactccaaagctatacatgtcaccagat |
10762544 |
T |
|
| Q |
328 |
gtagatacttcagaacccattccatattcta |
358 |
Q |
| |
|
|| || |||||||||||||||||||| |||| |
|
|
| T |
10762545 |
gttgacacttcagaacccattccatactcta |
10762575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 544 - 660
Target Start/End: Complemental strand, 9825374 - 9825258
Alignment:
| Q |
544 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatcacaatgaatgatcgattgc |
643 |
Q |
| |
|
||||||||||||||| ||||||||||||||| | |||| ||| || || || |||| ||||| ||| |||||||||| ||||||||||| ||| ||||| |
|
|
| T |
9825374 |
tgagacaagtcttgcaatgccaaaatcactcgcctgagaaacaatatcttcatcaacaaggatattacttggctttatatcacaatgaaggattaattgc |
9825275 |
T |
|
| Q |
644 |
tcacattcaagatgaag |
660 |
Q |
| |
|
||||| ||| ||||||| |
|
|
| T |
9825274 |
tcacaatcacgatgaag |
9825258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 28 - 358
Target Start/End: Complemental strand, 10581800 - 10581470
Alignment:
| Q |
28 |
acatccactatattcattctttcttttggtgattccactgaacaagcaagtccaatcctaaaaagtgaaactacgcacttctctacatttggagtgaaat |
127 |
Q |
| |
|
|||||| | ||||||| ||||||||||||||| |||| |||||| |||||||||||||||||||||||||| ||||| || | || |||| | | || |
|
|
| T |
10581800 |
acatcctcaatattcagtctttcttttggtgactccattgaacacataagtccaatcctaaaaagtgaaactaagcactcctttgcagctggaataagat |
10581701 |
T |
|
| Q |
128 |
ttccactgtttccatcttctattgttgcttctatatttcttggtacaagatttgggtccaaaatatgtataagattattaggcaacgaaatttcaacaaa |
227 |
Q |
| |
|
| || ||||||||||| ||| | ||||| | |||| || ||||| |||||||||||| | |||||||| ||| || || ||| ||||||| |
|
|
| T |
10581700 |
tctcaagatttccatcttccatttctacttctgcgtcccttgataaaagatgtgggtccaaaattttcttaagattagcaggaaatgatattgcaacaaa |
10581601 |
T |
|
| Q |
228 |
aatacgtagattttgaccattgtcaaacatttcatctaccggtctccttccggtaagaatttccaacaaaagcatcccgaagctatacatatcaccatat |
327 |
Q |
| |
|
|| | ||||||||||||| ||||| | ||| ||||| || |||||||| |||||||||| ||| || || ||||||||||| |||||| || |
|
|
| T |
10581600 |
gttatgcagattttgaccatcttcaaaagcgtgatcagtgggtcttctaccggtaagcatttccaacataaggattccaaagctatacatgtcaccacat |
10581501 |
T |
|
| Q |
328 |
gtagatacttcagaacccattccatattcta |
358 |
Q |
| |
|
| |||||||||||||||||| ||||| |||| |
|
|
| T |
10581500 |
gcagatacttcagaacccatcccatactcta |
10581470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 165 - 353
Target Start/End: Original strand, 10716518 - 10716706
Alignment:
| Q |
165 |
tcttggtacaagatttgggtccaaaatatgtataagattattaggcaacgaaatttcaacaaaaatacgtagattttgaccattgtcaaacatttcatct |
264 |
Q |
| |
|
||||| |||||||| ||| |||||||| | ||||||||| | ||| || ||| | ||||||| || | ||||||||||||| | ||| | |||||| |
|
|
| T |
10716518 |
tcttgatacaagatgtggatccaaaatctttataagattgtcaggaaatgaagatgcaacaaagttatgcagattttgaccatcttgaaaaaattcatca |
10716617 |
T |
|
| Q |
265 |
accggtctccttccggtaagaatttccaacaaaagcatcccgaagctatacatatcaccatatgtagatacttcagaacccattccata |
353 |
Q |
| |
|
||||| || |||||||| |||||||||| ||| || || ||||||||||| |||||| |||| || |||||||||||||||||||| |
|
|
| T |
10716618 |
gtgggtcttctaccggtaagcatttccaacataaggattccaaagctatacatgtcaccacatgtggacacttcagaacccattccata |
10716706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 10565793 - 10565730
Alignment:
| Q |
43 |
attctttcttttggtgattccactgaacaagcaagtccaatcctaaaaagtgaaactacgcact |
106 |
Q |
| |
|
||||||||||||||||| |||| |||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
10565793 |
attctttcttttggtgactccattgaacacataagtccaatcctaaaaagtgaaactaagcact |
10565730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 268 - 358
Target Start/End: Complemental strand, 10565568 - 10565478
Alignment:
| Q |
268 |
ggtctccttccggtaagaatttccaacaaaagcatcccgaagctatacatatcaccatatgtagatacttcagaacccattccatattcta |
358 |
Q |
| |
|
||||| || |||||||| |||||||||| || || || |||||||||||||||||| |||| |||||||||| |||||| ||||| |||| |
|
|
| T |
10565568 |
ggtcttctaccggtaagcatttccaacataaagattccaaagctatacatatcaccacatgtggatacttcagcacccatcccatactcta |
10565478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 10716391 - 10716465
Alignment:
| Q |
26 |
tgacatccactatattcattctttcttttggtgattccactgaacaagcaagtccaatcctaaaaagtgaaacta |
100 |
Q |
| |
|
||||||||| ||||||||||||||| | |||||||||| || |||| ||||||||||||| ||||| ||||||| |
|
|
| T |
10716391 |
tgacatccataatattcattctttctatcggtgattccattgtacaaacaagtccaatcctgaaaagagaaacta |
10716465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 268 - 358
Target Start/End: Original strand, 11048306 - 11048396
Alignment:
| Q |
268 |
ggtctccttccggtaagaatttccaacaaaagcatcccgaagctatacatatcaccatatgtagatacttcagaacccattccatattcta |
358 |
Q |
| |
|
||||| || |||||||| |||||||||| ||| || || ||||||||||| |||||| | || || |||||||||||||||||||| |||| |
|
|
| T |
11048306 |
ggtcttctaccggtaagcatttccaacataaggattccaaagctatacatgtcaccacacgtggacacttcagaacccattccatactcta |
11048396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 10760796 - 10760865
Alignment:
| Q |
81 |
aatcctaaaaagtgaaactacgcacttctctacatttggagtgaaatttccactgtttccatcttctatt |
150 |
Q |
| |
|
||||||||| |||||||||| ||||||||||||| ||||| | | ||| ||| |||||||||||| |||| |
|
|
| T |
10760796 |
aatcctaaacagtgaaactaagcacttctctacacttggaataagattcccattgtttccatcttgtatt |
10760865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 469 - 516
Target Start/End: Original strand, 11048513 - 11048560
Alignment:
| Q |
469 |
acctggaggagcatagccaatagtccctttaattccaattgtactagt |
516 |
Q |
| |
|
|||||||||||| |||||||| || ||||| ||||||||||||||||| |
|
|
| T |
11048513 |
acctggaggagcgtagccaatggttccttttattccaattgtactagt |
11048560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0692 (Bit Score: 91; Significance: 1e-43; HSPs: 2)
Name: scaffold0692
Description:
Target: scaffold0692; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 544 - 670
Target Start/End: Complemental strand, 7583 - 7457
Alignment:
| Q |
544 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatcacaatgaatgatcgattgc |
643 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| || ||||| |
|
|
| T |
7583 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggctttagatcacaatgaagtattaattgc |
7484 |
T |
|
| Q |
644 |
tcacattcaagatgaaggtaatgtaat |
670 |
Q |
| |
|
|||||||| ||||||| ||||||||| |
|
|
| T |
7483 |
tcacattctcgatgaagttaatgtaat |
7457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0692; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 358
Target Start/End: Complemental strand, 7940 - 7747
Alignment:
| Q |
165 |
tcttggtacaagatttgggtccaaaatatgtataagattattaggcaacgaaatttcaacaaaaatacgtagattttgaccattgtcaaacatttcatct |
264 |
Q |
| |
|
|||||||| ||||| ||| |||||||| | ||||||||||| ||| || |||||| |||||| || | ||||||||||||| ||||| | |||||| |
|
|
| T |
7940 |
tcttggtaaaagatgtggatccaaaatctttataagattatcaggaaatgaaattgtaacaaagttatgcagattttgaccatcttcaaaaagttcatca |
7841 |
T |
|
| Q |
265 |
accggtctccttccggtaagaatttccaacaaaagcatcccgaagctatacatatcaccatatgtagatacttcagaacccattccatattcta |
358 |
Q |
| |
|
||||| || || ||||| ||||||| || ||| || || ||||||||||| |||||| |||| |||||||| ||||||| ||||| |||| |
|
|
| T |
7840 |
gtgggtcttctaccagtaagcatttccagcataaggattccaaagctatacatgtcaccacatgtggatacttcttaacccatcccatactcta |
7747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 91; Significance: 1e-43; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 544 - 670
Target Start/End: Complemental strand, 12899860 - 12899734
Alignment:
| Q |
544 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatcacaatgaatgatcgattgc |
643 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| || ||||| |
|
|
| T |
12899860 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggctttatatcacaatgaaagactaattgc |
12899761 |
T |
|
| Q |
644 |
tcacattcaagatgaaggtaatgtaat |
670 |
Q |
| |
|
|||||||| ||||||| ||||||||| |
|
|
| T |
12899760 |
tcacattctcgatgaagataatgtaat |
12899734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 544 - 666
Target Start/End: Complemental strand, 12932569 - 12932447
Alignment:
| Q |
544 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatcacaatgaatgatcgattgc |
643 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||| ||| | ||| |
|
|
| T |
12932569 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggttttagatcacaatgaaggattaactgc |
12932470 |
T |
|
| Q |
644 |
tcacattcaagatgaaggtaatg |
666 |
Q |
| |
|
|||||||| ||||||||||||| |
|
|
| T |
12932469 |
tcacattctcgatgaaggtaatg |
12932447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 544 - 670
Target Start/End: Complemental strand, 12948934 - 12948808
Alignment:
| Q |
544 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatcacaatgaatgatcgattgc |
643 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||| || ||||| |
|
|
| T |
12948934 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggttttagatcacaatgaaggactaattgc |
12948835 |
T |
|
| Q |
644 |
tcacattcaagatgaaggtaatgtaat |
670 |
Q |
| |
|
||||||| ||||||| ||||||||| |
|
|
| T |
12948834 |
tcacattatcgatgaagataatgtaat |
12948808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 544 - 670
Target Start/End: Complemental strand, 12907480 - 12907354
Alignment:
| Q |
544 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatcacaatgaatgatcgattgc |
643 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||| ||||||||| | ||| | ||| |
|
|
| T |
12907480 |
tgagacaagtcttgctatgccaaaatcactcaaatgagcaaccatgtcatcatcaagaaggacattgcttggttttagatcacaatggaggattaactgc |
12907381 |
T |
|
| Q |
644 |
tcacattcaagatgaaggtaatgtaat |
670 |
Q |
| |
|
|||||||| ||||||| ||||||||| |
|
|
| T |
12907380 |
tcacattctcgatgaagataatgtaat |
12907354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 544 - 670
Target Start/End: Complemental strand, 12958368 - 12958242
Alignment:
| Q |
544 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatcacaatgaatgatcgattgc |
643 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||| |||| ||| | ||| |
|
|
| T |
12958368 |
tgagacaagtcttgctattccaaaatcactcacatgagcaaccatgtcaccatcaagaaggacattgcttggctttagatcacagtgaaggattaactgc |
12958269 |
T |
|
| Q |
644 |
tcacattcaagatgaaggtaatgtaat |
670 |
Q |
| |
|
|||||||| ||||||| ||||||||| |
|
|
| T |
12958268 |
tcacattctcgatgaagataatgtaat |
12958242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 26 - 358
Target Start/End: Complemental strand, 12958864 - 12958532
Alignment:
| Q |
26 |
tgacatccactatattcattctttcttttggtgattccactgaacaagcaagtccaatcctaaaaagtgaaactacgcacttctctacatttggagtgaa |
125 |
Q |
| |
|
||||||| || |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||| ||||||| ||||| | | |
|
|
| T |
12958864 |
tgacatcgacaatattcattctttcttttggtgattccaatgaacataaaagtccaatcctaaaaagtgaaactaagcactcctctacagttggaataag |
12958765 |
T |
|
| Q |
126 |
atttccactgtttccatcttctattgttgcttctatatttcttggtacaagatttgggtccaaaatatgtataagattattaggcaacgaaatttcaaca |
225 |
Q |
| |
|
| | || |||||||||||| ||| | | ||| | |||||||| ||||| ||| ||||| || | ||| ||||||| ||| || ||| || |||| |
|
|
| T |
12958764 |
aatctcatgatttccatcttctcttgctccatcttcagctcttggtaaaagatgtggatccaacatctttattagattatcaggaaatgaatttgtaaca |
12958665 |
T |
|
| Q |
226 |
aaaatacgtagattttgaccattgtcaaacatttcatctaccggtctccttccggtaagaatttccaacaaaagcatcccgaagctatacatatcaccat |
325 |
Q |
| |
|
|| || | ||||||||||||| ||||| | |||||| ||||| || || ||||| ||||||| || ||| || || ||||||||||| |||||| |
|
|
| T |
12958664 |
aagttatgcagattttgaccatcttcaaaaagttcatcagtgggtcttctaccagtaagcatttccagcataaggattccaaagctatacatgtcaccac |
12958565 |
T |
|
| Q |
326 |
atgtagatacttcagaacccattccatattcta |
358 |
Q |
| |
|
|||| |||||||| |||||||| ||||| |||| |
|
|
| T |
12958564 |
atgtggatacttctgaacccatcccatactcta |
12958532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 26 - 346
Target Start/End: Complemental strand, 12907976 - 12907656
Alignment:
| Q |
26 |
tgacatccactatattcattctttcttttggtgattccactgaacaagcaagtccaatcctaaaaagtgaaactacgcacttctctacatttggagtgaa |
125 |
Q |
| |
|
||||||| || ||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||| || ||||| ||||||||||||| | | |
|
|
| T |
12907976 |
tgacatctacaatattcattctttcttttgttgattccaatgaacataaaagtccaatcctaaaaagtgaagttaagcactcctctacatttggaataag |
12907877 |
T |
|
| Q |
126 |
atttccactgtttccatcttctattgttgcttctatatttcttggtacaagatttgggtccaaaatatgtataagattattaggcaacgaaatttcaaca |
225 |
Q |
| |
|
| | || |||||||||||||| | ||||| | |||||||| ||||| ||| |||||||| | ||||||||||| ||| || |||||| |||| |
|
|
| T |
12907876 |
aatctcatgaattccatcttctattcctccttcttcagctcttggtaaaagatgtggatccaaaatctttataagattatcaggaaatgaaattgtaaca |
12907777 |
T |
|
| Q |
226 |
aaaatacgtagattttgaccattgtcaaacatttcatctaccggtctccttccggtaagaatttccaacaaaagcatcccgaagctatacatatcaccat |
325 |
Q |
| |
|
|| || | ||||||||||||| ||||| | |||||| ||||| || || ||||| ||||||| || ||| || || ||||||||||| |||||| |
|
|
| T |
12907776 |
aagttatgcagattttgaccatcttcaaaaagttcatcagtgggtcttctaccagtaagcatttccagcataaggattccaaagctatacatgtcaccac |
12907677 |
T |
|
| Q |
326 |
atgtagatacttcagaaccca |
346 |
Q |
| |
|
| || |||||||| ||||||| |
|
|
| T |
12907676 |
aagtggatacttctgaaccca |
12907656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 26 - 358
Target Start/End: Complemental strand, 12933065 - 12932733
Alignment:
| Q |
26 |
tgacatccactatattcattctttcttttggtgattccactgaacaagcaagtccaatcctaaaaagtgaaactacgcacttctctacatttggagtgaa |
125 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| ||||||||| | ||| | |||| | ||||| | |
|
|
| T |
12933065 |
tgacatccacaatattcattctttcttttggtgattccaaagaacataaaagtgcaatcctaagaagtgaaacaaagcaatcttctatagttggaatatg |
12932966 |
T |
|
| Q |
126 |
atttccactgtttccatcttctattgttgcttctatatttcttggtacaagatttgggtccaaaatatgtataagattattaggcaacgaaatttcaaca |
225 |
Q |
| |
|
| | || |||||||||||||||| | ||||| | |||||||| ||||| ||| |||||||| | ||||||||||| ||| || |||||| |||| |
|
|
| T |
12932965 |
aatctcatgatttccatcttctattgctccttcttcagctcttggtaaaagatgtggatccaaaatctttataagattatcaggaaatgaaattgtaaca |
12932866 |
T |
|
| Q |
226 |
aaaatacgtagattttgaccattgtcaaacatttcatctaccggtctccttccggtaagaatttccaacaaaagcatcccgaagctatacatatcaccat |
325 |
Q |
| |
|
|| || | ||||||||||||| ||||| | |||||| ||||| || || ||||| ||||||| || ||| || || ||||||||||| |||||| |
|
|
| T |
12932865 |
aagttatgcagattttgaccatcttcaaaaagttcatcggtgggtcttctaccagtaagcatttccagcataaggattccaaagctatacatgtcaccac |
12932766 |
T |
|
| Q |
326 |
atgtagatacttcagaacccattccatattcta |
358 |
Q |
| |
|
|||| || ||||| |||||||| ||||| |||| |
|
|
| T |
12932765 |
atgtggaaacttctgaacccatcccatactcta |
12932733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 26 - 358
Target Start/End: Complemental strand, 12900359 - 12900024
Alignment:
| Q |
26 |
tgacatccactatattcattctttcttttggtgattccactgaacaagcaagtccaatcctaaaaagtgaaactacgcacttctctacatttggagtgaa |
125 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| ||||||||||| ||||| |||| | ||||| | |
|
|
| T |
12900359 |
tgacatccacaatattcattctttcttttggtgattccaaagaacataaaagtgcaatcctaagaagtgaaactaagcactcttctatagttggaatatg |
12900260 |
T |
|
| Q |
126 |
atttccactgtttccatcttctattgttgc---ttctatatttcttggtacaagatttgggtccaaaatatgtataagattattaggcaacgaaatttca |
222 |
Q |
| |
|
| | || |||||||||||||||| | | |||| | |||||||| ||||| ||| |||||||| | ||||||||||| ||| || |||||| | |
|
|
| T |
12900259 |
aatctcatgatttccatcttctattgctcctaattcttcagctcttggtaaaagatgtggatccaaaatctttataagattatcaggaaatgaaattgta |
12900160 |
T |
|
| Q |
223 |
acaaaaatacgtagattttgaccattgtcaaacatttcatctaccggtctccttccggtaagaatttccaacaaaagcatcccgaagctatacatatcac |
322 |
Q |
| |
|
||||| || | ||||||||||||| ||||| | |||||| ||||| || || ||||| ||||||| || ||| || || ||||||||||| |||| |
|
|
| T |
12900159 |
acaaagttatgcagattttgaccatcttcaaaaagttcatcagtgggtcttctaccagtaagcatttccagcataaggattccaaagctatacatgtcac |
12900060 |
T |
|
| Q |
323 |
catatgtagatacttcagaacccattccatattcta |
358 |
Q |
| |
|
|| | || |||||||| |||||||| ||||| |||| |
|
|
| T |
12900059 |
cacaagtggatacttctgaacccatcccatactcta |
12900024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 12949405 - 12949339
Alignment:
| Q |
26 |
tgacatccactatattcattctttcttttggtgattccactgaacaagcaagtccaatcctaaaaag |
92 |
Q |
| |
|
|||||||||| |||||||||||||| |||| |||||||| ||||||| |||||||||||||||||| |
|
|
| T |
12949405 |
tgacatccacaatattcattctttcatttgatgattccaatgaacaaaaaagtccaatcctaaaaag |
12949339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 358
Target Start/End: Complemental strand, 12949280 - 12949087
Alignment:
| Q |
165 |
tcttggtacaagatttgggtccaaaatatgtataagattattaggcaacgaaatttcaacaaaaatacgtagattttgaccattgtcaaacatttcatct |
264 |
Q |
| |
|
|||||||| ||||| ||| |||||||| | || | |||||| || || ||||||| |||||| || | ||||||||||||| ||||| | |||||| |
|
|
| T |
12949280 |
tcttggtaaaagatgtggatccaaaatctttacgaaattattgggaaatgaaattttaacaaagttatgcagattttgaccatcttcaaaaagttcatca |
12949181 |
T |
|
| Q |
265 |
accggtctccttccggtaagaatttccaacaaaagcatcccgaagctatacatatcaccatatgtagatacttcagaacccattccatattcta |
358 |
Q |
| |
|
||||| || || ||||| ||||||| || ||| || || ||||||||||| |||||| | || |||||||| |||||||| ||||| |||| |
|
|
| T |
12949180 |
gtgggtcttctaccagtaagcatttccagcataaggattccaaagctatacatgtcaccacaagtggatacttccgaacccatcccatactcta |
12949087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 87; Significance: 3e-41; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 544 - 666
Target Start/End: Original strand, 17923322 - 17923444
Alignment:
| Q |
544 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatcacaatgaatgatcgattgc |
643 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||| ||| | ||| |
|
|
| T |
17923322 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggttttagatcacaatgaaggattaactgc |
17923421 |
T |
|
| Q |
644 |
tcacattcaagatgaaggtaatg |
666 |
Q |
| |
|
|||||||| ||||||||||||| |
|
|
| T |
17923422 |
tcacattctcgatgaaggtaatg |
17923444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 26 - 358
Target Start/End: Original strand, 17922820 - 17923152
Alignment:
| Q |
26 |
tgacatccactatattcattctttcttttggtgattccactgaacaagcaagtccaatcctaaaaagtgaaactacgcacttctctacatttggagtgaa |
125 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||| ||||| ||||||| ||||| | |
|
|
| T |
17922820 |
tgacatccacaatattcattctttcttttggtgattccaatgaacaaaaaagtccaatcctaaaaagggaaactaagcactcctctacagttggaagaag |
17922919 |
T |
|
| Q |
126 |
atttccactgtttccatcttctattgttgcttctatatttcttggtacaagatttgggtccaaaatatgtataagattattaggcaacgaaatttcaaca |
225 |
Q |
| |
|
| | || |||||||||||| || | | ||| | |||||||| ||||| ||| |||||||| | ||||||||| ||| || |||||| |||| |
|
|
| T |
17922920 |
aatctcatgatttccatcttctcgtgctccatcttcagctcttggtaaaagatgtggatccaaaatctttataagattgcaaggaaatgaaattgtaaca |
17923019 |
T |
|
| Q |
226 |
aaaatacgtagattttgaccattgtcaaacatttcatctaccggtctccttccggtaagaatttccaacaaaagcatcccgaagctatacatatcaccat |
325 |
Q |
| |
|
|| || ||||||||||||| | | ||| | |||||| ||||| ||||||||||| ||||||| || ||| || || ||||||||||| ||||||| |
|
|
| T |
17923020 |
aagttatgtagattttgaccgtctttaaaaagttcatcggtgggtcttcttccggtaagcatttccagcataaggattccaaagctatacatgtcaccat |
17923119 |
T |
|
| Q |
326 |
atgtagatacttcagaacccattccatattcta |
358 |
Q |
| |
|
| || |||||||| |||||||| ||||| |||| |
|
|
| T |
17923120 |
aagtggatacttctgaacccatcccatactcta |
17923152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 73; Significance: 6e-33; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 548 - 632
Target Start/End: Original strand, 39875815 - 39875899
Alignment:
| Q |
548 |
acaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatcacaatgaa |
632 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
39875815 |
acaagtctggctaagccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggttttaaatcacaatgaa |
39875899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 548 - 632
Target Start/End: Original strand, 39883938 - 39884022
Alignment:
| Q |
548 |
acaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatcacaatgaa |
632 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
39883938 |
acaagtctggctaagccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggttttaaatcacaatgaa |
39884022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 548 - 632
Target Start/End: Original strand, 39890892 - 39890976
Alignment:
| Q |
548 |
acaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatcacaatgaa |
632 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
39890892 |
acaagtctggctaagccaaaatcactcacatgagcaaccatgtcatcttcaagaaggacattgcttggttttaaatcacaatgaa |
39890976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 56; Significance: 8e-23; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 550 - 653
Target Start/End: Complemental strand, 28605907 - 28605804
Alignment:
| Q |
550 |
aagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatcacaatgaatgatcgattgctcacat |
649 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||| | |||||| | |||||||||||||||||||||||||||||| | |||||| || |
|
|
| T |
28605907 |
aagtcttgcttgtccaaaatcactcacatgagcaaccatgtcattatgaagaagaatattgcttggctttaaatcacaatgaatgattggatgctcagat |
28605808 |
T |
|
| Q |
650 |
tcaa |
653 |
Q |
| |
|
|||| |
|
|
| T |
28605807 |
tcaa |
28605804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 468 - 636
Target Start/End: Original strand, 27723899 - 27724067
Alignment:
| Q |
468 |
tacctggaggagcatagccaatagtccctttaattccaattgtactagtttctcgatgagaggtgtcgtcaataactgagacaagtcttgctatgccaaa |
567 |
Q |
| |
|
|||||||||||||||| |||||||| || |||||||||||||| ||||| | | ||| ||| || | | | | |||||||| |||||| ||||| |
|
|
| T |
27723899 |
tacctggaggagcatatccaatagttcccttaattccaattgtgctagtctgtagatcggagatgccattgacggcacagacaagttttgctagtccaaa |
27723998 |
T |
|
| Q |
568 |
atcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatcacaatgaatgat |
636 |
Q |
| |
|
|||||| ||| ||||||||||||||| ||||||||| | || |||| |||||||||||||| ||||| |
|
|
| T |
27723999 |
atcactaacacgagcaaccatgtcattgtcaagaagaatgttatttggttttaaatcacaatggatgat |
27724067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 56; Significance: 8e-23; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 555 - 666
Target Start/End: Original strand, 31467092 - 31467203
Alignment:
| Q |
555 |
ttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttaaatcacaatgaatgatcgattgctcacattcaag |
654 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| ||| |||||||| || ||||| |||||||||||||||||||||| | ||||| ||||||| | |
|
|
| T |
31467092 |
ttgctatgccaaaatcactcacatgagctaccatagaatcatcaagaagaacgttgctaggctttaaatcacaatgaatgacaggttgctgacattcatg |
31467191 |
T |
|
| Q |
655 |
atgaaggtaatg |
666 |
Q |
| |
|
|||||| ||||| |
|
|
| T |
31467192 |
atgaagataatg |
31467203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 31466553 - 31466650
Alignment:
| Q |
19 |
tctctgatgacatccactatattcattctttcttttggtgattccactgaacaagcaagtccaatcctaaaaagtgaaactacgcacttctctacatt |
116 |
Q |
| |
|
||||| ||||| || || ||| |||| ||||||||||||||||||| ||||||| ||||| |||| ||||||||||||| || || ||||||||||| |
|
|
| T |
31466553 |
tctctaatgacttcaaccatactcatcctttcttttggtgattccattgaacaaccaagtgcaatactaaaaagtgaaattaaacatttctctacatt |
31466650 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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