View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11218_low_3 (Length: 702)
Name: NF11218_low_3
Description: NF11218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11218_low_3 |
 | |
|
| [»] scaffold0287 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0287 (Bit Score: 642; Significance: 0; HSPs: 1)
Name: scaffold0287
Description:
Target: scaffold0287; HSP #1
Raw Score: 642; E-Value: 0
Query Start/End: Original strand, 14 - 687
Target Start/End: Original strand, 15530 - 16203
Alignment:
| Q |
14 |
cacagaacctacttgtcgcagctaccgacacaacttcagccacatcggtttgggcgatgactggattaatgaagaatccaagagcaatgaagaaagctca |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15530 |
cacagaacctacttgtcgcagctaccgacacaacttcagccacatcggtttgggcgatgactggattaatgaagaatccaagagcaatgaagaaagctca |
15629 |
T |
|
| Q |
114 |
agaagaaattagaaacatatgtggcaaaaaagagttcatagatgaagatgatattcaaaagcttgtatatctcaaggctgtgataaaagagacattaaga |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
15630 |
agaagaaattagaaacatatgtggcaaaaaagagttcatagatgaagatgatattcaaaagcttgtatatcttaaggctgtgataaaagaaacattaaga |
15729 |
T |
|
| Q |
214 |
ttctatgcaccagcaccactagccccaagagagaccagtaaaagtttcattctaaatggatataaaatagaaccaaaaacatcagtgtttgtgaatattt |
313 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15730 |
ttctatgcaccagcaccactagccccaagagagaccagtaaaagtttcattctaaatggacataaaatagaaccaaaaacatcagtgtttgtgaatattt |
15829 |
T |
|
| Q |
314 |
gggccattcatagggaccccgaggcatggaaagatcccgacgagttttatccagagagattcttaaacaacgatatagattttaagggacgagattttga |
413 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| |
|
|
| T |
15830 |
gggccattcatagggaccccgaggcatggaaagatcccgacgagttttatccagagagattcttaaacaatgatatagattttaaaggacgggattttga |
15929 |
T |
|
| Q |
414 |
gttgataccatttggtgcagggcgtagaatttgccctggcatgccattgggaatcgccaccgtggaaatgataattgcaaaccttcttaattcatttgat |
513 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15930 |
gttgataccatttggtgcagggcgtagaatttgccctggcatgccattgggaatcgccacggtggaaatgataattgcaaaccttcttaattcatttgat |
16029 |
T |
|
| Q |
514 |
tgggaaatgcctgaagggatgacaaaggaagatattgacactgaagggttgccaggactttctagacacaagaagaatcacctttgccttgttgccaaga |
613 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16030 |
tgggaaacgcctgaagggatgacaaaggaagatattgacactgaagggttgccaggactttctagacacaagaagaatcacctttgccttgttgccaaga |
16129 |
T |
|
| Q |
614 |
atcacatgtaaatgtcacaaggaaaagaaagaatgcttgctggtaattagactgtggaggaatgcttgtttttt |
687 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16130 |
atcacatgtaaatgtcacaaggaaaagaaagaatgcttgctggtaattagactgtggaggaatgcttgtttttt |
16203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 642; Significance: 0; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 642; E-Value: 0
Query Start/End: Original strand, 14 - 687
Target Start/End: Complemental strand, 3630555 - 3629882
Alignment:
| Q |
14 |
cacagaacctacttgtcgcagctaccgacacaacttcagccacatcggtttgggcgatgactggattaatgaagaatccaagagcaatgaagaaagctca |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3630555 |
cacagaacctacttgtcgcagctaccgacacaacttcagccacatcggtttgggcgatgactggattaatgaagaatccaagagcaatgaagaaagctca |
3630456 |
T |
|
| Q |
114 |
agaagaaattagaaacatatgtggcaaaaaagagttcatagatgaagatgatattcaaaagcttgtatatctcaaggctgtgataaaagagacattaaga |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
3630455 |
agaagaaattagaaacatatgtggcaaaaaagagttcatagatgaagatgatattcaaaagcttgtatatcttaaggctgtgataaaagaaacattaaga |
3630356 |
T |
|
| Q |
214 |
ttctatgcaccagcaccactagccccaagagagaccagtaaaagtttcattctaaatggatataaaatagaaccaaaaacatcagtgtttgtgaatattt |
313 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3630355 |
ttctatgcaccagcaccactagccccaagagagaccagtaaaagtttcattctaaatggacataaaatagaaccaaaaacatcagtgtttgtgaatattt |
3630256 |
T |
|
| Q |
314 |
gggccattcatagggaccccgaggcatggaaagatcccgacgagttttatccagagagattcttaaacaacgatatagattttaagggacgagattttga |
413 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| |
|
|
| T |
3630255 |
gggccattcatagggaccccgaggcatggaaagatcccgacgagttttatccagagagattcttaaacaatgatatagattttaaaggacgggattttga |
3630156 |
T |
|
| Q |
414 |
gttgataccatttggtgcagggcgtagaatttgccctggcatgccattgggaatcgccaccgtggaaatgataattgcaaaccttcttaattcatttgat |
513 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3630155 |
gttgataccatttggtgcagggcgtagaatttgccctggcatgccattgggaatcgccacggtggaaatgataattgcaaaccttcttaattcatttgat |
3630056 |
T |
|
| Q |
514 |
tgggaaatgcctgaagggatgacaaaggaagatattgacactgaagggttgccaggactttctagacacaagaagaatcacctttgccttgttgccaaga |
613 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3630055 |
tgggaaacgcctgaagggatgacaaaggaagatattgacactgaagggttgccaggactttctagacacaagaagaatcacctttgccttgttgccaaga |
3629956 |
T |
|
| Q |
614 |
atcacatgtaaatgtcacaaggaaaagaaagaatgcttgctggtaattagactgtggaggaatgcttgtttttt |
687 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3629955 |
atcacatgtaaatgtcacaaggaaaagaaagaatgcttgctggtaattagactgtggaggaatgcttgtttttt |
3629882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 425; E-Value: 0
Query Start/End: Original strand, 14 - 629
Target Start/End: Complemental strand, 3620173 - 3619564
Alignment:
| Q |
14 |
cacagaacctacttgtcgcagctaccgacacaacttcagccacatcggtttgggcgatgactggattaatgaagaatccaagagcaatgaagaaagctca |
113 |
Q |
| |
|
||||||| |||||||| |||||||| ||||||| | |||||||||| ||||||| |||||| |||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
3620173 |
cacagaatctacttgtagcagctactgacacaagtgcagccacatcagtttgggtgatgaccggattaataaagaatccaagagcaatgaagaaagctca |
3620074 |
T |
|
| Q |
114 |
agaagaaattagaaacatatgtggcaaaaaagagttcatagatgaagatgatattcaaaagcttgtatatctcaaggctgtgataaaagagacattaaga |
213 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
3620073 |
agaagaaattagaaacat------caaaaaagagttcatagatgaagatgatattcaaaagtttgtatattttaaggctgtgataaaagagacattaaga |
3619980 |
T |
|
| Q |
214 |
ttctatgcaccagcaccactagccccaagagagaccagtaaaagtttcattctaaatggatataaaatagaaccaaaaacatcagtgtttgtgaatattt |
313 |
Q |
| |
|
|||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
3619979 |
ttctattcaccagcaccactagcccctagagagaccagtaaaagtttcacactaaatggatataaaatagaaccaaaaacatcagtgtttgtgagtattt |
3619880 |
T |
|
| Q |
314 |
gggccattcatagggaccccgaggcatggaaagatcccgacgagttttatccagagagattcttaaacaacgatatagattttaagggacgagattttga |
413 |
Q |
| |
|
|| | |||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| || |
|
|
| T |
3619879 |
ggtctattcatagggaccccgagacatggaaagaccccgatgagttttatccagagagattcttaaacaatgatatagattttaagggacaaaatttcga |
3619780 |
T |
|
| Q |
414 |
gttgataccatttggtgcagggcgtagaatttgccctggcatgccattgggaatcgccaccgtggaaatgataattgcaaaccttcttaattcatttgat |
513 |
Q |
| |
|
||| || ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||| || |||||||||| |||||||||||||| || |||||| |
|
|
| T |
3619779 |
gtttattccattcggtgcagggcgtagaatatgccctggcataccattaggaatcgccacagtagaaatgataaccgcaaaccttcttaactcttttgat |
3619680 |
T |
|
| Q |
514 |
tgggaaatgcctgaagggatgacaaaggaagatattgacactgaagggttgccaggactttctagacacaagaagaatcacctttgccttgttgccaaga |
613 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3619679 |
tgggaaatgcctgaaggtatgacaaaggaagatatagacactgaaggattgccaggacttgctagacacaagaagaatcacctttgccttgttgccaaga |
3619580 |
T |
|
| Q |
614 |
atcacatgtaaatgtc |
629 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
3619579 |
atcacatgtaaatgtc |
3619564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 49 - 215
Target Start/End: Original strand, 8979102 - 8979268
Alignment:
| Q |
49 |
tcagccacatcggtttgggcgatgactggattaatgaagaatccaagagcaatgaagaaagctcaagaagaaattagaaacatatgtggcaaaaaagagt |
148 |
Q |
| |
|
||||||||||| |||||||| ||||||| |||| || || ||||||| ||||| |||| ||||| |||||||| ||| | | || |||||||| | |
|
|
| T |
8979102 |
tcagccacatcagtttgggctatgactgccctaataaaaaacccaagagtaatgagaaaagtgcaagaggaaattaggaacttgggaggtaaaaaagatt |
8979201 |
T |
|
| Q |
149 |
tcatagatgaagatgatattcaaaagcttgtatatctcaaggctgtgataaaagagacattaagatt |
215 |
Q |
| |
|
| |||||||||||||||||||||| | ||||| | ||||| ||||||||||||||||||||||| |
|
|
| T |
8979202 |
ttttagatgaagatgatattcaaaattctctatatttgaaggcagtgataaaagagacattaagatt |
8979268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 9000507 - 9000384
Alignment:
| Q |
50 |
cagccacatcggtttgggcgatgactggattaatgaagaatccaagagcaatgaagaaagctcaagaagaaattagaaacatatgtggcaaaaaagagtt |
149 |
Q |
| |
|
|||||||||| |||||||| ||||||| |||||||| || ||||||| ||||| ||||| ||||| ||||||||||| | | || ||||||| || |
|
|
| T |
9000507 |
cagccacatcagtttgggctatgactgccttaatgaaaaacccaagagtaatgaggaaagtacaagatgaaattagaaatttgggaggtgaaaaagattt |
9000408 |
T |
|
| Q |
150 |
catagatgaagatgatattcaaaa |
173 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
9000407 |
tttagatgaagatgatattcaaaa |
9000384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 215
Target Start/End: Complemental strand, 8966556 - 8966432
Alignment:
| Q |
91 |
ccaagagcaatgaagaaagctcaagaagaaattagaaacatatgtggcaaaaaagagttcatagatgaagatgatattcaaaagcttgtatatctcaagg |
190 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||| | | | |||||||| |||||||| ||| ||||||||||||| | |||| | |||| |
|
|
| T |
8966556 |
ccaagagtaatgaagaaagtacaagaagaaattagaaacttgggaagtaaaaaagaattcatagacgaaaatgatattcaaaatttcccatatttaaagg |
8966457 |
T |
|
| Q |
191 |
ctgtgataaaagagacattaagatt |
215 |
Q |
| |
|
| |||||||||||||| || ||||| |
|
|
| T |
8966456 |
cagtgataaaagagacgttgagatt |
8966432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 503 - 613
Target Start/End: Complemental strand, 8914368 - 8914258
Alignment:
| Q |
503 |
attcatttgattgggaaatgcctgaagggatgacaaaggaagatattgacactgaagggttgccaggactttctagacacaagaagaatcacctttgcct |
602 |
Q |
| |
|
|||| |||||||||||| | || || || ||| ||||||||||||||| |||||| ||| ||||||||| || ||||||||||||| | |||||||| |
|
|
| T |
8914368 |
attcctttgattgggaattaccagatggcctgataaaggaagatattgatactgaaaggtggccaggactcactcaacacaagaagaatgaactttgcct |
8914269 |
T |
|
| Q |
603 |
tgttgccaaga |
613 |
Q |
| |
|
|| ||||||| |
|
|
| T |
8914268 |
tgcagccaaga |
8914258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 387 - 613
Target Start/End: Complemental strand, 9000167 - 8999941
Alignment:
| Q |
387 |
tatagattttaagggacgagattttgagttgataccatttggtgcagggcgtagaatttgccctggcatgccattgggaatcgccaccgtggaaatgata |
486 |
Q |
| |
|
|||| ||||||| |||| ||||||||| | ||||| ||||| || || |||||||||||||| || ||||| ||| | | ||| | ||||| | || |
|
|
| T |
9000167 |
tataaattttaatggacaagattttgaactaataccctttggagctggtcgtagaatttgcccaggtatgcctatggcagttgcctcattggaacttatc |
9000068 |
T |
|
| Q |
487 |
attgcaaaccttcttaattcatttgattgggaaatgcctgaagggatgacaaaggaagatattgacactgaagggttgccaggactttctagacacaaga |
586 |
Q |
| |
|
|||| || |||||| |||||||||||||| || |||| | || | ||||||||||||||| |||||| ||||||||| | || |||||||| |
|
|
| T |
9000067 |
cttgccaatcttctttattcatttgattggaaattgccacatggaacagtaaaggaagatattgatactgaaatgttgccagggatcactcaacacaaga |
8999968 |
T |
|
| Q |
587 |
agaatcacctttgccttgttgccaaga |
613 |
Q |
| |
|
|||||| ||||||||||||||||||| |
|
|
| T |
8999967 |
agaatcctctttgccttgttgccaaga |
8999941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 508 - 613
Target Start/End: Complemental strand, 8900458 - 8900353
Alignment:
| Q |
508 |
tttgattgggaaatgcctgaagggatgacaaaggaagatattgacactgaagggttgccaggactttctagacacaagaagaatcacctttgccttgttg |
607 |
Q |
| |
|
|||||||||||| | || || || ||| ||||||||||||||| |||||| ||| ||||||||| || ||||||||||||| | |||||||||| | |
|
|
| T |
8900458 |
tttgattgggaattaccagatggtatggtaaaggaagatattgatactgaaaggtggccaggactcactcaacacaagaagaatgagctttgccttgcag |
8900359 |
T |
|
| Q |
608 |
ccaaga |
613 |
Q |
| |
|
|||||| |
|
|
| T |
8900358 |
ccaaga |
8900353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 537 - 613
Target Start/End: Original strand, 9014050 - 9014126
Alignment:
| Q |
537 |
aaaggaagatattgacactgaagggttgccaggactttctagacacaagaagaatcacctttgccttgttgccaaga |
613 |
Q |
| |
|
|||| |||||||||| |||||| ||||||||| | || |||||||||||||| ||||||||||||||||||| |
|
|
| T |
9014050 |
aaagaaagatattgatactgaaatgttgccagggatcactcaacacaagaagaatcctctttgccttgttgccaaga |
9014126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 322 - 449
Target Start/End: Complemental strand, 31039527 - 31039400
Alignment:
| Q |
322 |
catagggaccccgaggcatggaaagatcccgacgagttttatccagagagattcttaaacaacgatatagattttaagggacgagattttgagttgatac |
421 |
Q |
| |
|
||||| ||||| || | |||||| ||||| || ||||||||||||||||||||| || | ||||||||||| || |||| |||||||||| |||| | |
|
|
| T |
31039527 |
catagagacccagaagtatggaaggatccagaagagttttatccagagagattcataggaagtgatatagatttaaaaggacaagattttgagctgattc |
31039428 |
T |
|
| Q |
422 |
catttggtgcagggcgtagaatttgccc |
449 |
Q |
| |
|
| |||||| | ||||| ||||||||||| |
|
|
| T |
31039427 |
cgtttggttctgggcgaagaatttgccc |
31039400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 322 - 449
Target Start/End: Complemental strand, 31053017 - 31052890
Alignment:
| Q |
322 |
catagggaccccgaggcatggaaagatcccgacgagttttatccagagagattcttaaacaacgatatagattttaagggacgagattttgagttgatac |
421 |
Q |
| |
|
||||| ||||| || | |||||| ||||| || ||||||||||||||||||||| || | ||||||||||| || |||| |||||||||| |||| | |
|
|
| T |
31053017 |
catagagacccagaagtatggaaggatccagaagagttttatccagagagattcataggaagtgatatagatttaaaaggacaagattttgagctgattc |
31052918 |
T |
|
| Q |
422 |
catttggtgcagggcgtagaatttgccc |
449 |
Q |
| |
|
| |||||| | ||||| ||||||||||| |
|
|
| T |
31052917 |
cgtttggttctgggcgaagaatttgccc |
31052890 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 49 - 173
Target Start/End: Complemental strand, 20074379 - 20074255
Alignment:
| Q |
49 |
tcagccacatcggtttgggcgatgactggattaatgaagaatccaagagcaatgaagaaagctcaagaagaaattagaaacatatgtggcaaaaaagagt |
148 |
Q |
| |
|
||||||||| | || ||||| ||||||| |||||| || |||||||||| ||||||||||| ||| |||| |||||||| | | |||||||| | |
|
|
| T |
20074379 |
tcagccacaacagtatgggctatgactgcattaataaaaaatccaagagtaatgaagaaagtacaacaagagattagaaattcaaaagttaaaaaagaat |
20074280 |
T |
|
| Q |
149 |
tcatagatgaagatgatattcaaaa |
173 |
Q |
| |
|
| ||||||||||||||||| ||||| |
|
|
| T |
20074279 |
ttatagatgaagatgatatacaaaa |
20074255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 449
Target Start/End: Complemental strand, 31071834 - 31071722
Alignment:
| Q |
337 |
gcatggaaagatcccgacgagttttatccagagagattcttaaacaacgatatagattttaagggacgagattttgagttgataccatttggtgcagggc |
436 |
Q |
| |
|
|||||||| ||||| || ||||||||||||||||||||| || | ||||||||||| || |||| |||||| ||| |||| |||||||| | |||| |
|
|
| T |
31071834 |
gcatggaaggatccagaagagttttatccagagagattcataggtagtgatatagatttaaaaggacaagatttcgagctgattccatttggctcggggc |
31071735 |
T |
|
| Q |
437 |
gtagaatttgccc |
449 |
Q |
| |
|
| ||| ||||||| |
|
|
| T |
31071734 |
gaagagtttgccc |
31071722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 340 - 378
Target Start/End: Complemental strand, 9400323 - 9400285
Alignment:
| Q |
340 |
tggaaagatcccgacgagttttatccagagagattctta |
378 |
Q |
| |
|
||||||||||| || |||||||||||||||||||||||| |
|
|
| T |
9400323 |
tggaaagatccagaagagttttatccagagagattctta |
9400285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 537 - 613
Target Start/End: Complemental strand, 20073888 - 20073812
Alignment:
| Q |
537 |
aaaggaagatattgacactgaagggttgccaggactttctagacacaagaagaatcacctttgccttgttgccaaga |
613 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||| || ||||| |||||| | |||||||||| ||||||| |
|
|
| T |
20073888 |
aaaggaagatattgatactgaaaggttgccaggactcactcagcacaaaaagaatgagctttgccttgcagccaaga |
20073812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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