View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11218_low_51 (Length: 214)
Name: NF11218_low_51
Description: NF11218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11218_low_51 |
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Alignment Details
Target: chr7 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 19 - 199
Target Start/End: Original strand, 42879279 - 42879459
Alignment:
| Q |
19 |
aggcccctgtcgagttcttaatttctgcctccatatttagaggctaatctgtagctatgcaactaaatgctttgcatgcatttcaatgagaggggtttga |
118 |
Q |
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| T |
42879279 |
aggcccctgtcgagttcttaatttctgcctccatatttagaggctaatctgtagctatgcaactaaatgctttgcatgcatttcaatgagaggggtttga |
42879378 |
T |
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| Q |
119 |
gaattcaattcaaactttcatcaattgagtattaatatttatggctatgatctgcttggattgtactatactatattatct |
199 |
Q |
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| T |
42879379 |
gaattcaattcaaactttcatcaattgagtattaatatttatggctatgatctgcttggattgtactatactatattatct |
42879459 |
T |
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