View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1121_high_25 (Length: 324)

Name: NF1121_high_25
Description: NF1121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1121_high_25
NF1121_high_25
[»] chr3 (36 HSPs)
chr3 (1-296)||(6236393-6236688)
chr3 (63-296)||(6140954-6141187)
chr3 (63-296)||(6167559-6167792)
chr3 (63-294)||(6264352-6264586)
chr3 (66-296)||(13271684-13271914)
chr3 (63-296)||(6257870-6258103)
chr3 (64-296)||(6898756-6898988)
chr3 (64-296)||(6723208-6723440)
chr3 (64-284)||(7748682-7748902)
chr3 (64-296)||(6915769-6916001)
chr3 (99-296)||(6592517-6592714)
chr3 (89-296)||(6850434-6850640)
chr3 (64-296)||(6881184-6881416)
chr3 (62-183)||(6244074-6244195)
chr3 (208-296)||(6243985-6244073)
chr3 (1-63)||(27879805-27879868)
chr3 (1-63)||(14138059-14138121)
chr3 (1-62)||(2005526-2005587)
chr3 (1-62)||(2721507-2721568)
chr3 (1-62)||(1993007-1993068)
chr3 (1-62)||(5687556-5687617)
chr3 (1-62)||(13044507-13044568)
chr3 (1-62)||(13045061-13045122)
chr3 (1-62)||(13045615-13045676)
chr3 (1-62)||(13046169-13046230)
chr3 (1-62)||(13046723-13046784)
chr3 (1-62)||(13051898-13051959)
chr3 (1-62)||(13068353-13068414)
chr3 (1-62)||(17209214-17209275)
chr3 (1-33)||(14139862-14139894)
chr3 (1-63)||(14072178-14072240)
chr3 (1-62)||(3250540-3250601)
chr3 (139-296)||(5279327-5279484)
chr3 (5-62)||(5666095-5666152)
chr3 (5-62)||(40846365-40846422)
chr3 (1-62)||(47974511-47974572)
[»] chr1 (7 HSPs)
chr1 (63-200)||(35141497-35141634)
chr1 (1-60)||(19875587-19875646)
chr1 (1-62)||(19880557-19880618)
chr1 (1-62)||(41801847-41801908)
chr1 (1-62)||(41461284-41461345)
chr1 (1-62)||(52168642-52168703)
chr1 (1-33)||(22410716-22410748)
[»] chr5 (14 HSPs)
chr5 (1-62)||(20725303-20725364)
chr5 (1-63)||(23434907-23434969)
chr5 (1-63)||(23446274-23446336)
chr5 (1-62)||(17409176-17409237)
chr5 (1-62)||(20169911-20169972)
chr5 (1-62)||(12321923-12321984)
chr5 (1-62)||(20916399-20916460)
chr5 (1-62)||(21381850-21381911)
chr5 (1-62)||(23756155-23756216)
chr5 (1-62)||(23821611-23821672)
chr5 (5-63)||(34223581-34223639)
chr5 (1-62)||(23756310-23756371)
chr5 (1-62)||(23821766-23821827)
chr5 (1-62)||(26744663-26744724)
[»] chr7 (17 HSPs)
chr7 (1-64)||(1611590-1611653)
chr7 (4-62)||(8780882-8780940)
chr7 (1-62)||(12198727-12198788)
chr7 (1-53)||(39270739-39270791)
chr7 (1-62)||(4029612-4029673)
chr7 (1-62)||(8787712-8787773)
chr7 (1-62)||(11997785-11997846)
chr7 (1-62)||(20626486-20626547)
chr7 (1-62)||(20630377-20630438)
chr7 (1-62)||(20642796-20642857)
chr7 (1-62)||(22578191-22578252)
chr7 (1-60)||(4090276-4090335)
chr7 (1-62)||(20636544-20636605)
chr7 (1-62)||(20638416-20638477)
chr7 (1-62)||(21506542-21506603)
chr7 (1-33)||(4791325-4791357)
chr7 (1-33)||(41781376-41781408)
[»] chr8 (15 HSPs)
chr8 (1-63)||(1990946-1991008)
chr8 (1-60)||(25396534-25396593)
chr8 (1-62)||(6570955-6571016)
chr8 (1-62)||(14878716-14878777)
chr8 (5-66)||(21139228-21139289)
chr8 (1-63)||(15759206-15759268)
chr8 (1-65)||(29003194-29003258)
chr8 (1-62)||(14820751-14820812)
chr8 (1-62)||(17504565-17504626)
chr8 (5-62)||(23448537-23448594)
chr8 (1-62)||(23455150-23455211)
chr8 (1-62)||(37300169-37300230)
chr8 (1-62)||(37652395-37652456)
chr8 (1-62)||(42418969-42419030)
chr8 (1-61)||(5578665-5578725)
[»] chr6 (11 HSPs)
chr6 (1-63)||(29359890-29359952)
chr6 (1-62)||(8603077-8603138)
chr6 (1-62)||(6794531-6794593)
chr6 (1-62)||(19570463-19570524)
chr6 (1-62)||(30671750-30671811)
chr6 (1-62)||(22737388-22737449)
chr6 (1-33)||(19590532-19590564)
chr6 (1-62)||(19615676-19615738)
chr6 (1-62)||(5153090-5153151)
chr6 (1-62)||(18731927-18731988)
chr6 (1-62)||(25774595-25774656)
[»] chr4 (9 HSPs)
chr4 (1-62)||(16954365-16954426)
chr4 (1-62)||(9856772-9856833)
chr4 (1-62)||(15409581-15409642)
chr4 (1-62)||(39043939-39044000)
chr4 (5-62)||(43701924-43701981)
chr4 (1-63)||(17006881-17006943)
chr4 (1-62)||(21274781-21274842)
chr4 (1-33)||(7196815-7196847)
chr4 (1-33)||(9944525-9944557)
[»] chr2 (9 HSPs)
chr2 (1-62)||(24178136-24178197)
chr2 (1-62)||(21119691-21119752)
chr2 (1-62)||(27744624-27744685)
chr2 (1-62)||(29577803-29577864)
chr2 (1-62)||(23703839-23703899)
chr2 (1-62)||(24171557-24171618)
chr2 (1-63)||(23699270-23699332)
chr2 (1-62)||(23014955-23015016)
chr2 (1-62)||(30949699-30949760)
[»] scaffold1092 (1 HSPs)
scaffold1092 (1-62)||(2143-2204)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-62)||(22201-22262)
[»] scaffold0231 (1 HSPs)
scaffold0231 (1-64)||(20885-20948)
[»] scaffold0535 (1 HSPs)
scaffold0535 (1-63)||(815-877)
[»] scaffold0861 (1 HSPs)
scaffold0861 (1-62)||(966-1027)
[»] scaffold0772 (1 HSPs)
scaffold0772 (1-62)||(1608-1669)
[»] scaffold0630 (1 HSPs)
scaffold0630 (1-62)||(5033-5094)
[»] scaffold0362 (1 HSPs)
scaffold0362 (1-62)||(9558-9619)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1-62)||(453-514)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-62)||(31524-31585)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-60)||(191612-191671)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-63)||(107226-107288)
[»] scaffold1225 (1 HSPs)
scaffold1225 (5-62)||(1898-1955)
[»] scaffold0512 (1 HSPs)
scaffold0512 (1-62)||(5291-5352)
[»] scaffold0278 (1 HSPs)
scaffold0278 (1-62)||(12945-13006)
[»] scaffold0261 (1 HSPs)
scaffold0261 (1-62)||(4412-4473)
[»] scaffold0060 (1 HSPs)
scaffold0060 (1-62)||(73228-73289)
[»] scaffold0347 (1 HSPs)
scaffold0347 (1-33)||(2522-2554)


Alignment Details
Target: chr3 (Bit Score: 280; Significance: 1e-157; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 6236688 - 6236393
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatcactcagtaactaaagcacgtgtctcgatcttggaggctc 100  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6236688 acttaaatctaaataaaacgaaatcaaatattatataaaaactactcattatttactcatcactcagtaactaaagcacgtgtctcgatcttggaggctc 6236589  T
Q  101 ttcgaccaaatagaaatctcatgaggctcggcatcaatgactacagaggtagtagctttcctaattggcttggggatcatcatctacccaatttagtatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6236588 ttcgaccaaatagaaatctcatgaggctcggcatcaatgactacagaggtagtagctttcctaattggcttggggatcatcatctacccaatttagtatc 6236489  T
Q  201 tcttgaattgttgggatgtaaatattgttcccagttgccatcacttgggcagttcccttctctcaagaagctttccatatcaggatgtcatggaat 296  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6236488 tcttgaattgttgggatgtaaatattgttcccagttgccaccacttgggcagttcccttctctcaagaagctttccatatcaggatgtcatggaat 6236393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 63 - 296
Target Start/End: Complemental strand, 6141187 - 6140954
Alignment:
Q  63 ctcagtaactaaagcacgtgtctcgatcttggaggctcttcgaccaaatagaaatctcatgaggctcggcatcaatgactacagaggtagtagctttcct 162  Q
    |||||||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||    
T  6141187 ctcagtaacagaagcacgtgtctcggtcttggaggctcttcaaccaaatagaaacctcatgaggctcaccatcaatgactacagaggtagtagctttcct 6141088  T
Q  163 aattggcttggggatcatcatctacccaatttagtatctcttgaattgttgggatgtaaatattgttcccagttgccatcacttgggcagttcccttctc 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||| |||||||||||||||||||||    
T  6141087 aattggcttggggatcatcatctacccaatttagtatctcttgaattgttgggatgtacacactgttcccagttgccaccacttgggcagttcccttctc 6140988  T
Q  263 tcaagaagctttccatatcaggatgtcatggaat 296  Q
    |||||||||||||||| ||||| |||||||||||    
T  6140987 tcaagaagctttccatttcaggctgtcatggaat 6140954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 63 - 296
Target Start/End: Complemental strand, 6167792 - 6167559
Alignment:
Q  63 ctcagtaactaaagcacgtgtctcgatcttggaggctcttcgaccaaatagaaatctcatgaggctcggcatcaatgactacagaggtagtagctttcct 162  Q
    ||||| |||| |||||||| ||| | ||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||     
T  6167792 ctcagaaactgaagcacgtctcttggtcttggaggctcttcaaccaaatagaaatctcatgaggctcaccatcaatgactacagaggtagtagctttcca 6167693  T
Q  163 aattggcttggggatcatcatctacccaatttagtatctcttgaattgttgggatgtaaatattgttcccagttgccatcacttgggcagttcccttctc 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||| ||||||||||||||| |||||    
T  6167692 aattggcttggggatcatcatctacccaatttagtatctcttgaattgtttggatgtaaacactgttcccagttgccaccacttgggcagttccattctc 6167593  T
Q  263 tcaagaagctttccatatcaggatgtcatggaat 296  Q
    |||||||||||||||| || || |||||||||||    
T  6167592 tcaagaagctttccatttccggctgtcatggaat 6167559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 63 - 294
Target Start/End: Complemental strand, 6264586 - 6264352
Alignment:
Q  63 ctcagtaactaaagcacgtgtctcgatcttggaggctcttcgaccaaatagaaatctcatgaggctcggcatcaatgactacagaggtagtagctttcct 162  Q
    |||||||||| ||||| || ||||| ||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  6264586 ctcagtaactgaagcatgtttctcggtcttggaggctctgcgaccaaatagaaatctcacgaggctcagcatcaatgactacagaggtagtagctttcct 6264487  T
Q  163 aattggcttggggatcat---catctacccaatttagtatctcttgaattgttgggatgtaaatattgttcccagttgccatcacttgggcagttccctt 259  Q
    ||||||||||||||||||   |||||| |||||||| |||||||||||||||||||||||| | | ||||||||||||||| ||||||||||||||||||    
T  6264486 aattggcttggggatcatcatcatctagccaatttattatctcttgaattgttgggatgtacacactgttcccagttgccaccacttgggcagttccctt 6264387  T
Q  260 ctctcaagaagctttccatatcaggatgtcatgga 294  Q
    ||||||||||||||||||| ||||| |||||||||    
T  6264386 ctctcaagaagctttccatttcaggctgtcatgga 6264352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 66 - 296
Target Start/End: Original strand, 13271684 - 13271914
Alignment:
Q  66 agtaactaaagcacgtgtctcgatcttggaggctcttcgaccaaatagaaatctcatgaggctcggcatcaatgactacagaggtagtagctttcctaat 165  Q
    ||||||| |||||||||||||| ||||||| ||||||| |||||||||| | |||||||| |||  |||||||||||||||||||||||||||||| |||    
T  13271684 agtaactgaagcacgtgtctcggtcttggaagctcttcaaccaaatagacacctcatgagactcaccatcaatgactacagaggtagtagctttccaaat 13271783  T
Q  166 tggcttggggatcatcatctacccaatttagtatctcttgaattgttgggatgtaaatattgttcccagttgccatcacttgggcagttcccttctctca 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||| ||||||||||||| |||||||||     
T  13271784 tggcttggggatcatcatctacccaatttagtatctcttgaattgttgggatgtaaactctgttcccagttgccaccacttgggcagttgccttctctcg 13271883  T
Q  266 agaagctttccatatcaggatgtcatggaat 296  Q
    ||||||||||||| || || |||||||||||    
T  13271884 agaagctttccatttctggctgtcatggaat 13271914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 63 - 296
Target Start/End: Complemental strand, 6258103 - 6257870
Alignment:
Q  63 ctcagtaactaaagcacgtgtctcgatcttggaggctcttcgaccaaatagaaatctcatgaggctcggcatcaatgactacagaggtagtagctttcct 162  Q
    ||||| |||| |||||||||| ||| ||||||||||||||| ||| |||||||| ||||||||||||  ||||||||||||||||||||||||||||||     
T  6258103 ctcagaaactgaagcacgtgtatcggtcttggaggctcttcaacctaatagaaacctcatgaggctcaccatcaatgactacagaggtagtagctttcca 6258004  T
Q  163 aattggcttggggatcatcatctacccaatttagtatctcttgaattgttgggatgtaaatattgttcccagttgccatcacttgggcagttcccttctc 262  Q
    |||||||||||||||| | ||||||| ||||||||||||||||||||  ||||||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  6258003 aattggcttggggatcttaatctaccaaatttagtatctcttgaattagtgggatgtaaacattgttcccagttgccaccacttgggaagttcccttctc 6257904  T
Q  263 tcaagaagctttccatatcaggatgtcatggaat 296  Q
    |||||||||||||||| ||||| |||||||||||    
T  6257903 tcaagaagctttccatttcaggctgtcatggaat 6257870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 64 - 296
Target Start/End: Complemental strand, 6898988 - 6898756
Alignment:
Q  64 tcagtaactaaagcacgtgtctcgatcttggaggctcttcgaccaaatagaaatctcatgaggctcggcatcaatgactacagaggtagtagctttccta 163  Q
    |||||||||||||||||||||||  |||| |||||||||| |||||||| ||| |||||||||||   |||||| ||||||||||| ||||| ||||| |    
T  6898988 tcagtaactaaagcacgtgtctctgtcttagaggctcttcaaccaaatataaacctcatgaggctaaccatcaaagactacagaggcagtagatttccaa 6898889  T
Q  164 attggcttggggatcatcatctacccaatttagtatctcttgaattgttgggatgtaaatattgttcccagttgccatcacttgggcagttcccttctct 263  Q
    |||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||  | |||||||||||||  ||||||||||||| || |||||    
T  6898888 attggcttggggttcatcatttacccaatttagtatctctagaattgttgggatgtaaacttcgttcccagttgcccccacttgggcagttaccctctct 6898789  T
Q  264 caagaagctttccatatcaggatgtcatggaat 296  Q
    ||||||||||||||| ||||| ||| |||||||    
T  6898788 caagaagctttccatttcaggctgtgatggaat 6898756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 64 - 296
Target Start/End: Original strand, 6723208 - 6723440
Alignment:
Q  64 tcagtaactaaagcacgtgtctcgatcttggaggctcttcgaccaaatagaaatctcatgaggctcggcatcaatgactacagaggtagtagctttccta 163  Q
    |||||||||||||||  ||||||  ||||||||||||||| |||||||| ||| ||||||||||||  |||||| |||||  |||| ||||||||||| |    
T  6723208 tcagtaactaaagcagatgtctctgtcttggaggctcttcaaccaaataaaaacctcatgaggctcaccatcaaagactatggaggcagtagctttccaa 6723307  T
Q  164 attggcttggggatcatcatctacccaatttagtatctcttgaattgttgggatgtaaatattgttcccagttgccatcacttgggcagttcccttctct 263  Q
    ||||| ||||| ||| |||| |||||||||||||||||||||||||||||||||||||||  ||||||||||| ||| |||||||||||||||| | |||    
T  6723308 attgggttgggtatcgtcatttacccaatttagtatctcttgaattgttgggatgtaaattctgttcccagttaccaccacttgggcagttcccctttct 6723407  T
Q  264 caagaagctttccatatcaggatgtcatggaat 296  Q
    | ||||||||||||| ||||| ||| |||||||    
T  6723408 cgagaagctttccatttcaggctgtgatggaat 6723440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 64 - 284
Target Start/End: Complemental strand, 7748902 - 7748682
Alignment:
Q  64 tcagtaactaaagcacgtgtctcgatcttggaggctcttcgaccaaatagaaatctcatgaggctcggcatcaatgactacagaggtagtagctttccta 163  Q
    ||||||||| |||||| ||||||  |||| |||||||| | |||||||||||| |||||||||||   |||||| ||||||||||| ||||||||||| |    
T  7748902 tcagtaactgaagcacatgtctctgtcttagaggctctccaaccaaatagaaacctcatgaggctaaccatcaaagactacagaggcagtagctttccaa 7748803  T
Q  164 attggcttggggatcatcatctacccaatttagtatctcttgaattgttgggatgtaaatattgttcccagttgccatcacttgggcagttcccttctct 263  Q
    |||||||||| ||| ||||| |||||||||||||  |||||||||||||||||||||||  |||||||||||| |||||||||||||||||||  |||||    
T  7748802 attggcttggcgattatcatttacccaatttagttactcttgaattgttgggatgtaaactttgttcccagttaccatcacttgggcagttccactctct 7748703  T
Q  264 caagaagctttccatatcagg 284  Q
    ||||||||||||||| |||||    
T  7748702 caagaagctttccatttcagg 7748682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 64 - 296
Target Start/End: Complemental strand, 6916001 - 6915769
Alignment:
Q  64 tcagtaactaaagcacgtgtctcgatcttggaggctcttcgaccaaatagaaatctcatgaggctcggcatcaatgactacagaggtagtagctttccta 163  Q
    ||||||||| ||||||   |||| |||||||||||||||| |||||||||||||||||||||||||  |||||| |||||  |||| |||||||||||      
T  6916001 tcagtaactgaagcacaaatctctatcttggaggctcttcaaccaaatagaaatctcatgaggctcaccatcaaagactatggaggcagtagctttccat 6915902  T
Q  164 attggcttggggatcatcatctacccaatttagtatctcttgaattgttgggatgtaaatattgttcccagttgccatcacttgggcagttcccttctct 263  Q
    |||||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||    |||||||||||||  |||||||||||||||| |||||    
T  6915901 attggcttggagattatcatttaccaaatttagtatctcttgaattgttgggatgtaaactccgttcccagttgccgccacttgggcagttcccctctct 6915802  T
Q  264 caagaagctttccatatcaggatgtcatggaat 296  Q
    |||||||||||  || ||||| ||| |||||||    
T  6915801 caagaagctttttatttcaggctgtgatggaat 6915769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 99 - 296
Target Start/End: Original strand, 6592517 - 6592714
Alignment:
Q  99 tcttcgaccaaatagaaatctcatgaggctcggcatcaatgactacagaggtagtagctttcctaattggcttggggatcatcatctacccaatttagta 198  Q
    ||||| |||||||||||| ||||||||||||  |||||| ||||||||||| || |||||||| ||||||||||| |||| | || ||||||| ||||||    
T  6592517 tcttcaaccaaatagaaacctcatgaggctcaccatcaaagactacagaggcagaagctttccaaattggcttggcgatctttatttacccaagttagta 6592616  T
Q  199 tctcttgaattgttgggatgtaaatattgttcccagttgccatcacttgggcagttcccttctctcaagaagctttccatatcaggatgtcatggaat 296  Q
    || ||||||||||||||||||||||    |||| | |||||| |||||||||||||||| |||||||||||||||||| | ||||| ||| |||||||    
T  6592617 tcccttgaattgttgggatgtaaattccattccgaattgccaccacttgggcagttcccctctctcaagaagctttccttttcaggctgtgatggaat 6592714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 89 - 296
Target Start/End: Original strand, 6850434 - 6850640
Alignment:
Q  89 tcttggaggctcttcgaccaaatagaaatctcatgaggctcggcatcaatgactacagaggtagtagctttcctaattggcttggggatcatcatctacc 188  Q
    ||||||| ||||||| ||||||| |||| |||||||||||   |||||| |||||| |||| |||||||| ||  ||||||| |||||| ||||| ||||    
T  6850434 tcttggaagctcttcaaccaaatggaaacctcatgaggctaaccatcaaagactaccgaggcagtagcttcccatattggctcggggattatcatttacc 6850533  T
Q  189 caatttagtatctcttgaattgttgggatgtaaatattgttcccagttgccatcacttgggcagttcccttctctcaagaagctttccatatcaggatgt 288  Q
    ||||||||||||||||| |||||||||||||||| |   ||||||||| ||||||||||||| |||||| ||||||||||| |||||||| ||||| |||    
T  6850534 caatttagtatctcttg-attgttgggatgtaaacaccattcccagtttccatcacttgggctgttcccctctctcaagaatctttccatttcaggctgt 6850632  T
Q  289 catggaat 296  Q
     |||||||    
T  6850633 gatggaat 6850640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 64 - 296
Target Start/End: Complemental strand, 6881416 - 6881184
Alignment:
Q  64 tcagtaactaaagcacgtgtctcgatcttggaggctcttcgaccaaatagaaatctcatgaggctcggcatcaatgactacagaggtagtagctttccta 163  Q
    ||||||||| ||||||  | |||  ||||||||||||||| |||||||| ||| |||| ||| ||   |||||| |||||||||||  |||||||||| |    
T  6881416 tcagtaactgaagcacaagcctctgtcttggaggctcttcaaccaaatataaacctcacgagtctaaccatcaaagactacagaggcggtagctttccaa 6881317  T
Q  164 attggcttggggatcatcatctacccaatttagtatctcttgaattgttgggatgtaaatattgttcccagttgccatcacttgggcagttcccttctct 263  Q
    | ||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||     ||||||||||||| | ||||||||||| || |||||    
T  6881316 actggcttggggatcgtcatttaccaaatttagtatctcttgaattgttgggatgtaaaatccattcccagttgccaccgcttgggcagtttccctctct 6881217  T
Q  264 caagaagctttccatatcaggatgtcatggaat 296  Q
    |||||||  |||||| ||| | ||| |||||||    
T  6881216 caagaagtgttccatttcaagctgtgatggaat 6881184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 62 - 183
Target Start/End: Complemental strand, 6244195 - 6244074
Alignment:
Q  62 actcagtaactaaagcacgtgtctcgatcttggaggctcttcgaccaaatagaaatctcatgaggctcggcatcaatgactacagaggtagtagctttcc 161  Q
    |||||| |||| |||||| |||||| |||||||||||||||| ||||||||| || ||| ||||||||  ||||||||||||||||||||||||||||||    
T  6244195 actcagaaactgaagcacatgtctctatcttggaggctcttcaaccaaatagtaacctcgtgaggctcaccatcaatgactacagaggtagtagctttcc 6244096  T
Q  162 taattggcttggggatcatcat 183  Q
     |||||||||||||||||||||    
T  6244095 aaattggcttggggatcatcat 6244074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 296
Target Start/End: Complemental strand, 6244073 - 6243985
Alignment:
Q  208 ttgttgggatgtaaatattgttcccagttgccatcacttgggcagttcccttctctcaagaagctttccatatcaggatgtcatggaat 296  Q
    |||||||||||||||   |||||| ||||||||  | ||  ||||||||| |||||||||||||||||||| ||||| |||||||||||    
T  6244073 ttgttgggatgtaaactctgttccaagttgccacaaattaagcagttcccatctctcaagaagctttccatttcaggctgtcatggaat 6243985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 27879868 - 27879805
Alignment:
Q  1 acttaaatct-aaataaaacgaaaccaaatattaaataaaaactactaattatttactcatcac 63  Q
    |||||||||| |||||||||||||| |||||||| || |||||||||||||||| |||||||||    
T  27879868 acttaaatcttaaataaaacgaaacaaaatattatattaaaactactaattattgactcatcac 27879805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 14138059 - 14138121
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatcac 63  Q
    ||||||||||||||||||||||||||||||||| |   |||| |||||||||| |||||||||    
T  14138059 acttaaatctaaataaaacgaaaccaaatattatacttaaacaactaattattgactcatcac 14138121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2005587 - 2005526
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||||||||| |||||||| |  ||||| |||||||||| ||||||||    
T  2005587 acttaaatctaaataaaacgaaactaaatattatactaaaacgactaattattgactcatca 2005526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2721568 - 2721507
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||||||||| |||||||| |  ||||| |||||||||| ||||||||    
T  2721568 acttaaatctaaataaaacgaaactaaatattatactaaaacgactaattattgactcatca 2721507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1993068 - 1993007
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||||||||| | |||||| |  ||||| |||||||||| ||||||||    
T  1993068 acttaaatctaaataaaacgaaactatatattatactaaaacgactaattattgactcatca 1993007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5687617 - 5687556
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    ||||||||||||||||||||| || || ||||| || ||||| |||||||||| ||||||||    
T  5687617 acttaaatctaaataaaacgacactaattattatattaaaacgactaattattgactcatca 5687556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13044568 - 13044507
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||||||||| ||||||||||  |||||  ||||||||| ||||||||    
T  13044568 acttaaatctaattaaaacgaaactaaatattaaactaaaacatctaattattgactcatca 13044507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13045122 - 13045061
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||||||||| ||||||||||  |||||  ||||||||| ||||||||    
T  13045122 acttaaatctaattaaaacgaaactaaatattaaactaaaacatctaattattgactcatca 13045061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13045676 - 13045615
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||||||||| ||||||||||  |||||  ||||||||| ||||||||    
T  13045676 acttaaatctaattaaaacgaaactaaatattaaactaaaacatctaattattgactcatca 13045615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13046230 - 13046169
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||||||||| ||||||||||  |||||  ||||||||| ||||||||    
T  13046230 acttaaatctaattaaaacgaaactaaatattaaactaaaacatctaattattgactcatca 13046169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13046784 - 13046723
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||||||||| ||||||||||  |||||  ||||||||| ||||||||    
T  13046784 acttaaatctaattaaaacgaaactaaatattaaactaaaacatctaattattgactcatca 13046723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13051959 - 13051898
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||||||||| ||||||||||  |||||  ||||||||| ||||||||    
T  13051959 acttaaatctaattaaaacgaaactaaatattaaactaaaacatctaattattgactcatca 13051898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13068414 - 13068353
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||||||||| ||||||||||  |||||  ||||||||| ||||||||    
T  13068414 acttaaatctaattaaaacgaaactaaatattaaactaaaacatctaattattgactcatca 13068353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17209275 - 17209214
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||||| |  ||||||||| || ||||  |||||||||||||||||||    
T  17209275 acttaaatctaaataaaacggactcaaatattatattaaaaacactaattatttactcatca 17209214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 14139862 - 14139894
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatatta 33  Q
    |||||||||||||||||||||||||||||||||    
T  14139862 acttaaatctaaataaaacgaaaccaaatatta 14139894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 14072178 - 14072240
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatcac 63  Q
    ||||||||||||||||||||||| ||||||||| |  ||||  |||||||| | |||||||||    
T  14072178 acttaaatctaaataaaacgaaatcaaatattatactaaaataactaattaatgactcatcac 14072240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3250540 - 3250601
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||| |||||||||| ||   |||||||| || |||||||||||||||| ||||||||    
T  3250540 acttaaatataaataaaacaaacttaaatattatattaaaactactaattattgactcatca 3250601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 296
Target Start/End: Complemental strand, 5279484 - 5279327
Alignment:
Q  139 gactacagaggtagtagctttcctaattggcttggggatcatcatctacccaatttagtatctcttgaattgttgggatgtaaatattgttcccagttgc 238  Q
    ||||||||||| | | |||||||  |||||||||||||   | || ||| |||||||||||| |||||| ||    |||||  || ||||| |||||| |    
T  5279484 gactacagaggcactggctttccacattggcttggggactgttatttactcaatttagtatcccttgaactgaatagatgtggattttgtttccagtttc 5279385  T
Q  239 catcacttgggcagttcccttctctcaagaagctttccatatcaggatgtcatggaat 296  Q
    || ||||||||||| | || ||||| ||| ||||||| || |||| |||| |||||||    
T  5279384 caccacttgggcagcttccctctcttaaggagctttctatttcagaatgtgatggaat 5279327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 5666152 - 5666095
Alignment:
Q  5 aaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    ||||||||||||||||| || |||||||| || ||||| |||||||||| ||| ||||    
T  5666152 aaatctaaataaaacgacactaaatattatattaaaacgactaattattgacttatca 5666095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 40846422 - 40846365
Alignment:
Q  5 aaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||  |  ||||||||| || |||||||||||||||| ||||||||    
T  40846422 aaatctaaataaaacagactcaaatattatattaaaactactaattattgactcatca 40846365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 47974572 - 47974511
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||| ||||| |||||||| |  ||||| |||||||||| ||||||||    
T  47974572 acttaaatctaattaaaatgaaactaaatattatactaaaacgactaattattgactcatca 47974511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 1e-38; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 35141497 - 35141634
Alignment:
Q  63 ctcagtaactaaagcacgtgtctcgatcttggaggctcttcgaccaaatagaaatctcatgaggctcggcatcaatgactacagaggtagtagctttcct 162  Q
    |||||||||  ||||| |||||||  | |||||| ||||||  ||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||     
T  35141497 ctcagtaacagaagcatgtgtctcagtgttggagtctcttcagccaaatagaaacctcatgaggctcaccatcaatgactacagaggtagtagctttcca 35141596  T
Q  163 aattggcttggggatcatcatctacccaatttagtatc 200  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  35141597 aattggcttggggatcatcatttacccaatttagtatc 35141634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 19875587 - 19875646
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcat 60  Q
    ||||||||||||||||||||||| ||||||||| || |||||||||||||||| ||||||    
T  19875587 acttaaatctaaataaaacgaaatcaaatattatattaaaactactaattattgactcat 19875646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19880557 - 19880618
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    ||||||||||||||||||||||| ||||||||| || |||||||||| ||||| ||||||||    
T  19880557 acttaaatctaaataaaacgaaatcaaatattatattaaaactactagttattgactcatca 19880618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41801908 - 41801847
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||||||||| |||||||| |  ||||| |||||||||| ||||||||    
T  41801908 acttaaatctaaataaaacgaaactaaatattatactaaaacgactaattattgactcatca 41801847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41461345 - 41461284
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||||||||| |||||||| |  ||||  |||||||||| ||||||||    
T  41461345 acttaaatctaaataaaacgaaactaaatattatactaaaatgactaattattgactcatca 41461284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 52168703 - 52168642
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||| |||   |||||||| || |||||||||||||||| ||||||||    
T  52168703 acttaaatctaattaaaaagaacttaaatattatattaaaactactaattattgactcatca 52168642  T

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Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 22410748 - 22410716
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatatta 33  Q
    |||||||||||||||||| ||||||||||||||    
T  22410748 acttaaatctaaataaaaggaaaccaaatatta 22410716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 20725303 - 20725364
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    ||||||||||||||||||||||| ||||||||| || |||||||||||||||| ||||||||    
T  20725303 acttaaatctaaataaaacgaaatcaaatattatattaaaactactaattattgactcatca 20725364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 23434969 - 23434907
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatcac 63  Q
    |||||||||||||||||||||||| |||||||| |  ||||| |||||||||| |||||||||    
T  23434969 acttaaatctaaataaaacgaaactaaatattatactaaaacgactaattattgactcatcac 23434907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 23446336 - 23446274
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatcac 63  Q
    |||||||||||||||||||||||| |||||||| |  ||||| |||||||||| |||||||||    
T  23446336 acttaaatctaaataaaacgaaactaaatattatactaaaacgactaattattgactcatcac 23446274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17409176 - 17409237
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    ||||||||||||||||||||||| ||||||||| || ||||  |||||||||| ||||||||    
T  17409176 acttaaatctaaataaaacgaaatcaaatattatattaaaataactaattattgactcatca 17409237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 20169911 - 20169972
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||||| || ||||||||| || |||||||||||||||| | ||||||    
T  20169911 acttaaatctaaataaaacggaatcaaatattatattaaaactactaattattgattcatca 20169972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12321984 - 12321923
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||| |||||||||||||| || ||||  |||||||| | ||||||||    
T  12321984 acttaaatctaaataaaatgaaaccaaatattatattaaaataactaattaatgactcatca 12321923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 20916399 - 20916460
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||||||||| |||||||| |  ||| | |||||||||| ||||||||    
T  20916399 acttaaatctaaataaaacgaaactaaatattatactaaaccgactaattattgactcatca 20916460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21381911 - 21381850
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    ||||||||||||||||||||||| ||||||||| || ||||  |||||||| | ||||||||    
T  21381911 acttaaatctaaataaaacgaaatcaaatattatattaaaataactaattaatgactcatca 21381850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23756216 - 23756155
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||||||||| |||||||| |  ||||| | |||||||| ||||||||    
T  23756216 acttaaatctaaataaaacgaaactaaatattatactaaaacgattaattattgactcatca 23756155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23821672 - 23821611
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||||||||| |||||||| |  ||||| | |||||||| ||||||||    
T  23821672 acttaaatctaaataaaacgaaactaaatattatactaaaacgattaattattgactcatca 23821611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 34223581 - 34223639
Alignment:
Q  5 aaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatcac 63  Q
    |||||||||||||||| |  ||||||||| || ||||||||| |||||| |||||||||    
T  34223581 aaatctaaataaaacggactcaaatattatattaaaactactgattattgactcatcac 34223639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23756371 - 23756310
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||||||||| |||||||| |  ||||| | |||||||| ||| ||||    
T  23756371 acttaaatctaaataaaacgaaactaaatattatactaaaacgaataattattgacttatca 23756310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23821827 - 23821766
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||||||||| |||||||| |  ||||| | |||||||| ||| ||||    
T  23821827 acttaaatctaaataaaacgaaactaaatattatactaaaacgaataattattgacttatca 23821766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 26744724 - 26744663
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||| ||||| ||||||||||  |||||  ||||||||| ||||||||    
T  26744724 acttaaatctaattaaaatgaaactaaatattaaactaaaacatctaattattgactcatca 26744663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 1611653 - 1611590
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatcact 64  Q
    ||||||||||||||||||||||| ||||||||  || |||||||||||||||| ||||||||||    
T  1611653 acttaaatctaaataaaacgaaatcaaatattgtatcaaaactactaattattgactcatcact 1611590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 8780882 - 8780940
Alignment:
Q  4 taaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    ||||||||||||||||| || ||||||||| || |||||||||||||||| ||||||||    
T  8780882 taaatctaaataaaacggaatcaaatattatattaaaactactaattattgactcatca 8780940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12198788 - 12198727
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||||||||| |||||||| |  ||||| |||||||||| ||||||||    
T  12198788 acttaaatctaaataaaacgaaactaaatattatactaaaacgactaattattgactcatca 12198727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 39270791 - 39270739
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatt 53  Q
    |||||||||||||||||||| || ||||||||| || ||||||||||||||||    
T  39270791 acttaaatctaaataaaacggaatcaaatattatattaaaactactaattatt 39270739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4029673 - 4029612
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||| |||||||||||||||||||||||| |  ||||  |||||||||| ||||||||    
T  4029673 acttaaatttaaataaaacgaaaccaaatattatactaaaataactaattattgactcatca 4029612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8787712 - 8787773
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||||| || ||||||||| || ||||||||| |||||  ||||||||    
T  8787712 acttaaatctaaataaaacggaatcaaatattatattaaaactacttattatggactcatca 8787773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 11997785 - 11997846
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||||||||| |||||||| |  ||||  |||||||||| ||||||||    
T  11997785 acttaaatctaaataaaacgaaactaaatattatactaaaatgactaattattgactcatca 11997846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20626547 - 20626486
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||||||||| ||||||||||  |||||  ||||||||| ||||||||    
T  20626547 acttaaatctaattaaaacgaaactaaatattaaactaaaacatctaattattgactcatca 20626486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20630438 - 20630377
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||||||||| ||||||||||  |||||  ||||||||| ||||||||    
T  20630438 acttaaatctaattaaaacgaaactaaatattaaactaaaacatctaattattgactcatca 20630377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20642857 - 20642796
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||||||||| ||||||||||  |||||  ||||||||| ||||||||    
T  20642857 acttaaatctaattaaaacgaaactaaatattaaactaaaacatctaattattgactcatca 20642796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22578252 - 22578191
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||||||||| ||||||||||  |||||  ||||||||| ||||||||    
T  22578252 acttaaatctaattaaaacgaaactaaatattaaactaaaacatctaattattgactcatca 22578191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 4090335 - 4090276
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcat 60  Q
    ||||||||||||||||||||||| ||||||||| || ||||  |||||||| | ||||||    
T  4090335 acttaaatctaaataaaacgaaatcaaatattatattaaaataactaattaatgactcat 4090276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20636605 - 20636544
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||| ||||| ||||||||||  |||||  ||||||||| ||||||||    
T  20636605 acttaaatctaattaaaatgaaactaaatattaaactaaaacatctaattattgactcatca 20636544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20638477 - 20638416
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||| ||||| ||||||||||  |||||  ||||||||| ||||||||    
T  20638477 acttaaatctaattaaaatgaaactaaatattaaactaaaacatctaattattgactcatca 20638416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21506603 - 21506542
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||||||||| ||||||||||  |||||   |||||||| ||||||||    
T  21506603 acttaaatctaattaaaacgaaactaaatattaaactaaaacagataattattgactcatca 21506542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 4791325 - 4791357
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatatta 33  Q
    |||||||||||||||||||||||| ||||||||    
T  4791325 acttaaatctaaataaaacgaaactaaatatta 4791357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 41781408 - 41781376
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatatta 33  Q
    |||||||||||||||||||||||| ||||||||    
T  41781408 acttaaatctaaataaaacgaaactaaatatta 41781376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 1990946 - 1991008
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatcac 63  Q
    |||||||||||||||||||| || ||||||||| || |||||||||||||||| |||||||||    
T  1990946 acttaaatctaaataaaacggaatcaaatattatattaaaactactaattattgactcatcac 1991008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 25396593 - 25396534
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcat 60  Q
    |||||||||||||||||||||||| |||||||| || ||||| |||||||||| ||||||    
T  25396593 acttaaatctaaataaaacgaaactaaatattatattaaaacgactaattattgactcat 25396534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6570955 - 6571016
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||||||||| |||||||| |  ||||| |||||||||| ||||||||    
T  6570955 acttaaatctaaataaaacgaaactaaatattatactaaaacgactaattattgactcatca 6571016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 14878716 - 14878777
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||||||||| |||||||| |  ||||| |||||||||| ||||||||    
T  14878716 acttaaatctaaataaaacgaaactaaatattatactaaaacgactaattattgactcatca 14878777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 21139289 - 21139228
Alignment:
Q  5 aaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatcactca 66  Q
    |||||||||||||||| |  ||||||||| || |||||||||||||||| ||||||||||||    
T  21139289 aaatctaaataaaacggactcaaatattatattaaaactactaattattgactcatcactca 21139228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 15759268 - 15759206
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatcac 63  Q
    ||||||||||||||||||||||||||||||||| |  ||||  |||||||||| ||| |||||    
T  15759268 acttaaatctaaataaaacgaaaccaaatattatactaaaataactaattattgactaatcac 15759206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29003258 - 29003194
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatcactc 65  Q
    ||||| |||||||||||||||||| |||||||| |  ||||| | |||||||| |||||||||||    
T  29003258 acttagatctaaataaaacgaaactaaatattatactaaaacgattaattattgactcatcactc 29003194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 14820812 - 14820751
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||||||||| ||||||||||  |||||   |||||||| ||||||||    
T  14820812 acttaaatctaattaaaacgaaactaaatattaaactaaaacatataattattgactcatca 14820751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17504565 - 17504626
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||||||||  ||||||||||  |||||  ||||||||| ||||||||    
T  17504565 acttaaatctaattaaaacgaaattaaatattaaactaaaacatctaattattgactcatca 17504626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 23448537 - 23448594
Alignment:
Q  5 aaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||| |  ||||||||| || ||||||| |||||||| ||||||||    
T  23448537 aaatctaaataaaacggactcaaatattacattaaaactattaattattgactcatca 23448594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23455211 - 23455150
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    ||||||||||||||||||||||| ||||||||| || ||||  | |||||| | ||||||||    
T  23455211 acttaaatctaaataaaacgaaatcaaatattatattaaaataattaattaatgactcatca 23455150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 37300169 - 37300230
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||| ||||||||||||||| |||||||| |  ||||| |||||||| | ||||||||    
T  37300169 acttaaatttaaataaaacgaaactaaatattatactaaaacaactaattaatgactcatca 37300230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37652456 - 37652395
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||| ||||| ||||||||||  |||||  ||||||||| ||||||||    
T  37652456 acttaaatctaattaaaatgaaactaaatattaaactaaaacatctaattattgactcatca 37652395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42418969 - 42419030
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||  |||||||||||||||||||| |  ||||  |||||||||| ||||||||    
T  42418969 acttaaatctagttaaaacgaaaccaaatattatactaaaataactaattattgactcatca 42419030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5578725 - 5578665
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatc 61  Q
    ||||||||||||||| ||||||||  ||||||| |  ||||| |||||||||| |||||||    
T  5578725 acttaaatctaaatagaacgaaactcaatattatactaaaacgactaattattgactcatc 5578665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 29359952 - 29359890
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatcac 63  Q
    |||||||||||||||||| |||| ||||||||| || |||||||||||||||| |||||||||    
T  29359952 acttaaatctaaataaaatgaaatcaaatattatattaaaactactaattattgactcatcac 29359890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 8603138 - 8603077
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||| |||| | ||||||||    
T  8603138 acttaaatctaaataaaacgaaaccaaatattatataaaaaccactgattaatgactcatca 8603077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6794593 - 6794531
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaata-ttaaataaaaactactaattatttactcatca 62  Q
    ||||||||||||||||||||||| |||||| ||| || |||||||||||||||| ||||||||    
T  6794593 acttaaatctaaataaaacgaaatcaaatatttatattaaaactactaattattgactcatca 6794531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19570463 - 19570524
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    ||||||||||||| ||||||||||||||||||| | |||||  |||||||||| ||||||||    
T  19570463 acttaaatctaaaaaaaacgaaaccaaatattatacaaaaataactaattattgactcatca 19570524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30671750 - 30671811
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    ||||||||||||||||||||||||||||||||| |  ||||  |||||||||| ||||||||    
T  30671750 acttaaatctaaataaaacgaaaccaaatattatactaaaataactaattattgactcatca 30671811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22737449 - 22737388
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||||||||| |||||||| |  ||||| |||| ||||| ||||||||    
T  22737449 acttaaatctaaataaaacgaaactaaatattatactaaaacgactacttattgactcatca 22737388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 19590532 - 19590564
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatatta 33  Q
    |||||||||||||||||||||||||||||||||    
T  19590532 acttaaatctaaataaaacgaaaccaaatatta 19590564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19615676 - 19615738
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaact-actaattatttactcatca 62  Q
    |||||||||||||||||| |||||||||||||| || |||  | |||||||||| ||||||||    
T  19615676 acttaaatctaaataaaatgaaaccaaatattatattaaacttaactaattattgactcatca 19615738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 5153090 - 5153151
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||||||||| ||||||||||  |||||   |||||||| ||||||||    
T  5153090 acttaaatctaattaaaacgaaactaaatattaaactaaaacatataattattgactcatca 5153151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18731988 - 18731927
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||||||||| ||||||||||  |||||   |||||||| ||||||||    
T  18731988 acttaaatctaattaaaacgaaactaaatattaaactaaaacagataattattgactcatca 18731927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 25774656 - 25774595
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||||||||| |||||||| |  ||||| ||||| |||  ||||||||    
T  25774656 acttaaatctaaataaaacgaaactaaatattatactaaaacgactaactatcaactcatca 25774595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16954365 - 16954426
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||||| || ||||||||| || |||||||||||||||| ||||||||    
T  16954365 acttaaatctaaataaaacggaatcaaatattatattaaaactactaattattgactcatca 16954426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 9856833 - 9856772
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    ||||||||||||||||||||||| ||||||||| || ||||  |||||||| | ||||||||    
T  9856833 acttaaatctaaataaaacgaaatcaaatattatattaaaataactaattaatgactcatca 9856772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 15409642 - 15409581
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||||||||| ||||||||||  |||||  ||||||||| ||||||||    
T  15409642 acttaaatctaattaaaacgaaactaaatattaaactaaaacatctaattattgactcatca 15409581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 39043939 - 39044000
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||||||||  |||||||| |  ||||| |||||||||| ||||||||    
T  39043939 acttaaatctaaataaaacgaaattaaatattatactaaaacgactaattattgactcatca 39044000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 43701924 - 43701981
Alignment:
Q  5 aaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||  || ||||||||| || |||||||||||||||| ||||||||    
T  43701924 aaatctaaataaaacagaatcaaatattatattaaaactactaattattgactcatca 43701981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 17006881 - 17006943
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatcac 63  Q
    |||||||||||| ||||||||||| ||||||||||  |||||  ||||||||| || ||||||    
T  17006881 acttaaatctaattaaaacgaaactaaatattaaactaaaacatctaattattgacccatcac 17006943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21274842 - 21274781
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||||||||  ||||||||||  |||||  ||||||||| ||||||||    
T  21274842 acttaaatctaattaaaacgaaattaaatattaaactaaaacatctaattattgactcatca 21274781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 7196847 - 7196815
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatatta 33  Q
    ||||||||||||||||||||||| |||||||||    
T  7196847 acttaaatctaaataaaacgaaatcaaatatta 7196815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 9944557 - 9944525
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatatta 33  Q
    |||||||||||||||||||||||| ||||||||    
T  9944557 acttaaatctaaataaaacgaaactaaatatta 9944525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 24178136 - 24178197
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||| |||||||||||||| ||||||||| || |||||||||||||||| ||||||||    
T  24178136 acttaaatgtaaataaaacgaaatcaaatattatattaaaactactaattattgactcatca 24178197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21119752 - 21119691
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||||||||| |||||||| |  ||||| |||||||||| ||||||||    
T  21119752 acttaaatctaaataaaacgaaactaaatattatactaaaacgactaattattgactcatca 21119691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 27744685 - 27744624
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    ||||||||||||||||||||||||||||||||| || ||||  |||||||| | ||||||||    
T  27744685 acttaaatctaaataaaacgaaaccaaatattatattaaaataactaattaatgactcatca 27744624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29577803 - 29577864
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||||| || ||||||||| || |||||||||||||||| ||||||||    
T  29577803 acttaaatctaagtaaaacggaatcaaatattatattaaaactactaattattgactcatca 29577864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23703899 - 23703839
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||||| || ||||||||| || |||| ||||||||||| ||||||||    
T  23703899 acttaaatctaaataaaacggaatcaaatattatattaaaa-tactaattattgactcatca 23703839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 24171618 - 24171557
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||||||||| ||||||||||  |||||  ||||||||| ||||||||    
T  24171618 acttaaatctaattaaaacgaaactaaatattaaactaaaacatctaattattgactcatca 24171557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 23699270 - 23699332
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatcac 63  Q
    |||||||||||||||||||| |  ||||||||| || ||||  |||||||||| |||||||||    
T  23699270 acttaaatctaaataaaacggactcaaatattatattaaaaaaactaattattgactcatcac 23699332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 23014955 - 23015016
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||||||||| ||||||||||  |||||   |||||||| ||||||||    
T  23014955 acttaaatctaattaaaacgaaactaaatattaaactaaaacagataattattgactcatca 23015016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30949699 - 30949760
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    ||||||||||||||||||| |||| |||||||| |  ||||  |||||||||| ||||||||    
T  30949699 acttaaatctaaataaaacaaaactaaatattatactaaaataactaattattgactcatca 30949760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1092 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1092
Description:

Target: scaffold1092; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2143 - 2204
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    ||||||||||||||||||||||| ||||||||| || ||||  |||||||||| ||||||||    
T  2143 acttaaatctaaataaaacgaaatcaaatattatattaaaataactaattattgactcatca 2204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 22201 - 22262
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||||||||| ||||||||||  |||||  ||||||||| ||||||||    
T  22201 acttaaatctaaataaaacgaaactaaatattaaactaaaacatctaattattgactcatca 22262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 20948 - 20885
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatcact 64  Q
    |||||||||||||||||||| |  ||||||||| || ||||| |||||||||| ||||||||||    
T  20948 acttaaatctaaataaaacggagtcaaatattatattaaaaccactaattattgactcatcact 20885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 815 - 877
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatcac 63  Q
    |||||||||||| ||||||||||| ||||||||||  |||||  ||||||||| |||||||||    
T  815 acttaaatctaattaaaacgaaactaaatattaaactaaaacatctaattattgactcatcac 877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1027 - 966
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||||||||| ||||||||||  |||||  ||||||||| ||||||||    
T  1027 acttaaatctaattaaaacgaaactaaatattaaactaaaacatctaattattgactcatca 966  T

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Target: scaffold0772 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1669 - 1608
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    ||||||||||||||| |||||||| |||||||| |  ||||| |||||||||| ||||||||    
T  1669 acttaaatctaaatagaacgaaactaaatattatactaaaacgactaattattgactcatca 1608  T

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Target: scaffold0630 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5094 - 5033
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||||||||| ||||||||||  |||||  ||||||||| ||||||||    
T  5094 acttaaatctaattaaaacgaaactaaatattaaactaaaacatctaattattgactcatca 5033  T

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Target: scaffold0362 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9558 - 9619
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||||| |  ||||||||| || |||| ||||||||||| ||||||||    
T  9558 acttaaatctaaataaaacggactcaaatattatattaaaattactaattattgactcatca 9619  T

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Target: scaffold0328 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 453 - 514
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    ||||||||||||||||||||||||  ||||||| |  |||| ||||||||||| ||||||||    
T  453 acttaaatctaaataaaacgaaactgaatattatactaaaattactaattattgactcatca 514  T

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Target: scaffold0049 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31524 - 31585
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||||||||||||||| |||||||| |  ||||  |||||||||| ||||||||    
T  31524 acttaaatctaaataaaacgaaactaaatattatactaaaatgactaattattgactcatca 31585  T

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Target: scaffold0014 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 191612 - 191671
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcat 60  Q
    |||| ||||||||||||||||||| |||||||| |  ||||| |||||||||| ||||||    
T  191612 acttgaatctaaataaaacgaaactaaatattatactaaaacgactaattattgactcat 191671  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 107288 - 107226
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatcac 63  Q
    |||||||||||| ||||||||||| ||||||||||  |||||   |||||||| |||||||||    
T  107288 acttaaatctaattaaaacgaaactaaatattaaactaaaacagataattattgactcatcac 107226  T

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Target: scaffold1225 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1225
Description:

Target: scaffold1225; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 1955 - 1898
Alignment:
Q  5 aaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    ||||||||||||||||||  ||||||||| || ||||  |||||||||| ||||||||    
T  1955 aaatctaaataaaacgaactcaaatattatattaaaaacactaattattgactcatca 1898  T

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Target: scaffold0512 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5352 - 5291
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||||||||| ||||||||||  ||||| |  ||||||| ||||||||    
T  5352 acttaaatctaattaaaacgaaactaaatattaaactaaaacaaacaattattgactcatca 5291  T

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Target: scaffold0278 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 12945 - 13006
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    ||||||||||||| |||| ||||| |||||||| |  ||||| |||||||||| ||||||||    
T  12945 acttaaatctaaacaaaatgaaactaaatattatactaaaacgactaattattgactcatca 13006  T

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Target: scaffold0261 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4473 - 4412
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| || |||||||| ||||||||||  |||||  ||||||||| ||||||||    
T  4473 acttaaatctaattataacgaaactaaatattaaactaaaacatctaattattgactcatca 4412  T

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Target: scaffold0060 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 73289 - 73228
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatattaaataaaaactactaattatttactcatca 62  Q
    |||||||||||| ||||||||||  ||||||||||  ||||  |||||||||| ||||||||    
T  73289 acttaaatctaattaaaacgaaattaaatattaaactaaaataactaattattgactcatca 73228  T

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Target: scaffold0347 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 2522 - 2554
Alignment:
Q  1 acttaaatctaaataaaacgaaaccaaatatta 33  Q
    |||||||||||||||||||||||| ||||||||    
T  2522 acttaaatctaaataaaacgaaactaaatatta 2554  T

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