View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1121_high_9 (Length: 527)

Name: NF1121_high_9
Description: NF1121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1121_high_9
NF1121_high_9
[»] chr6 (45 HSPs)
chr6 (10-498)||(2112171-2112663)
chr6 (392-498)||(281841-281948)
chr6 (385-467)||(4420645-4420727)
chr6 (394-498)||(28660755-28660860)
chr6 (385-481)||(2117391-2117487)
chr6 (392-456)||(33080571-33080635)
chr6 (378-480)||(30523649-30523750)
chr6 (388-481)||(9667974-9668067)
chr6 (388-481)||(10616530-10616623)
chr6 (389-470)||(20377910-20377991)
chr6 (393-497)||(25100014-25100119)
chr6 (385-437)||(8010389-8010441)
chr6 (395-462)||(6647394-6647461)
chr6 (412-498)||(31671087-31671174)
chr6 (403-470)||(33067157-33067224)
chr6 (388-481)||(2023558-2023652)
chr6 (389-498)||(4006684-4006794)
chr6 (389-463)||(7931716-7931790)
chr6 (391-449)||(24745439-24745497)
chr6 (388-481)||(4246398-4246491)
chr6 (393-438)||(6536978-6537023)
chr6 (389-438)||(30863277-30863326)
chr6 (389-481)||(3181059-3181150)
chr6 (389-461)||(3528811-3528883)
chr6 (389-481)||(8035138-8035230)
chr6 (359-467)||(10476082-10476189)
chr6 (389-449)||(10616703-10616763)
chr6 (389-481)||(34403843-34403935)
chr6 (388-452)||(740875-740941)
chr6 (446-481)||(5623144-5623179)
chr6 (387-481)||(7785732-7785824)
chr6 (440-498)||(9093597-9093656)
chr6 (412-467)||(14706776-14706831)
chr6 (385-476)||(19275622-19275713)
chr6 (352-498)||(32975948-32976095)
chr6 (395-481)||(7446327-7446413)
chr6 (452-497)||(7485121-7485167)
chr6 (389-498)||(33089476-33089586)
chr6 (395-436)||(821458-821499)
chr6 (340-413)||(4331013-4331086)
chr6 (427-498)||(1402966-1403038)
chr6 (389-421)||(4080964-4080996)
chr6 (389-469)||(20368170-20368250)
chr6 (435-498)||(20671901-20671965)
chr6 (425-481)||(24838769-24838825)
[»] chr5 (50 HSPs)
chr5 (392-498)||(4855668-4855775)
chr5 (388-480)||(15003503-15003595)
chr5 (389-481)||(12459991-12460083)
chr5 (332-463)||(37611148-37611279)
chr5 (332-463)||(37787878-37788009)
chr5 (385-498)||(10272417-10272531)
chr5 (389-470)||(15402819-15402900)
chr5 (389-470)||(17368675-17368756)
chr5 (388-477)||(34205231-34205322)
chr5 (392-498)||(35960384-35960490)
chr5 (389-498)||(41534412-41534519)
chr5 (389-481)||(40205064-40205154)
chr5 (389-498)||(2568627-2568738)
chr5 (427-498)||(12595768-12595840)
chr5 (393-477)||(32194073-32194157)
chr5 (410-481)||(19369301-19369372)
chr5 (391-481)||(37690628-37690719)
chr5 (388-498)||(41957440-41957551)
chr5 (395-481)||(2569691-2569777)
chr5 (395-469)||(18543193-18543266)
chr5 (396-470)||(33533536-33533610)
chr5 (391-481)||(37526191-37526281)
chr5 (391-481)||(37588352-37588442)
chr5 (452-485)||(14961916-14961949)
chr5 (395-468)||(17258879-17258952)
chr5 (388-477)||(18704025-18704114)
chr5 (404-481)||(29054896-29054973)
chr5 (389-470)||(34690872-34690953)
chr5 (388-498)||(9202736-9202848)
chr5 (389-481)||(13604839-13604931)
chr5 (396-481)||(19138714-19138801)
chr5 (402-470)||(30217081-30217149)
chr5 (409-495)||(7319379-7319466)
chr5 (388-498)||(7674618-7674729)
chr5 (388-463)||(12242699-12242774)
chr5 (335-430)||(15405948-15406043)
chr5 (410-469)||(29659351-29659410)
chr5 (423-498)||(39257411-39257486)
chr5 (341-463)||(11457105-11457226)
chr5 (409-498)||(12425541-12425631)
chr5 (388-438)||(17369428-17369478)
chr5 (409-459)||(38104867-38104917)
chr5 (395-469)||(40534199-40534273)
chr5 (389-481)||(10125708-10125801)
chr5 (396-469)||(11707055-11707128)
chr5 (397-462)||(36638754-36638819)
chr5 (389-430)||(41830891-41830932)
chr5 (332-408)||(7856601-7856676)
chr5 (395-498)||(28586762-28586866)
chr5 (447-495)||(41419294-41419342)
[»] chr3 (65 HSPs)
chr3 (341-483)||(43115042-43115184)
chr3 (389-476)||(54837024-54837111)
chr3 (397-498)||(33883748-33883849)
chr3 (389-497)||(50952304-50952413)
chr3 (394-498)||(53848058-53848162)
chr3 (389-499)||(21367636-21367748)
chr3 (395-495)||(39602206-39602306)
chr3 (388-498)||(36646371-36646482)
chr3 (425-498)||(10101502-10101576)
chr3 (425-498)||(10212427-10212501)
chr3 (396-500)||(20669586-20669692)
chr3 (389-498)||(21574461-21574570)
chr3 (388-462)||(37273141-37273215)
chr3 (401-481)||(2318632-2318713)
chr3 (390-498)||(10357403-10357512)
chr3 (385-462)||(31010409-31010486)
chr3 (397-469)||(20669172-20669244)
chr3 (409-481)||(27792860-27792932)
chr3 (388-494)||(41724185-41724293)
chr3 (398-469)||(40665429-40665500)
chr3 (396-498)||(45432936-45433039)
chr3 (389-459)||(2152168-2152238)
chr3 (389-498)||(19679318-19679428)
chr3 (399-481)||(22214659-22214741)
chr3 (388-462)||(30923887-30923961)
chr3 (388-437)||(1810009-1810058)
chr3 (395-476)||(24785198-24785279)
chr3 (393-498)||(33405160-33405267)
chr3 (389-438)||(42745069-42745118)
chr3 (389-497)||(52618974-52619083)
chr3 (395-498)||(12923321-12923425)
chr3 (389-481)||(14548711-14548803)
chr3 (389-477)||(40880938-40881026)
chr3 (385-469)||(43875465-43875549)
chr3 (386-462)||(54180767-54180843)
chr3 (388-475)||(26808184-26808271)
chr3 (385-476)||(33725860-33725951)
chr3 (403-479)||(43875638-43875716)
chr3 (389-431)||(1833764-1833806)
chr3 (396-462)||(13709820-13709886)
chr3 (453-498)||(22214735-22214781)
chr3 (389-459)||(23793594-23793663)
chr3 (389-498)||(36139848-36139958)
chr3 (389-431)||(36200134-36200176)
chr3 (388-438)||(50004683-50004733)
chr3 (388-421)||(3044248-3044281)
chr3 (447-499)||(10540540-10540593)
chr3 (340-421)||(27294394-27294475)
chr3 (389-430)||(47249476-47249517)
chr3 (403-476)||(47319275-47319348)
chr3 (389-450)||(47513672-47513733)
chr3 (393-469)||(1816583-1816659)
chr3 (389-421)||(21754765-21754797)
chr3 (401-481)||(21862177-21862257)
chr3 (406-470)||(28622006-28622070)
chr3 (389-469)||(31710877-31710957)
chr3 (389-469)||(31711132-31711212)
chr3 (397-473)||(34924536-34924612)
chr3 (447-498)||(36783382-36783434)
chr3 (393-469)||(36887504-36887580)
chr3 (389-469)||(41644435-41644515)
chr3 (387-455)||(49586924-49586992)
chr3 (425-477)||(51510219-51510271)
chr3 (385-469)||(52412890-52412974)
chr3 (386-470)||(53891880-53891964)
[»] chr1 (83 HSPs)
chr1 (396-498)||(30257653-30257756)
chr1 (389-498)||(31517730-31517840)
chr1 (396-498)||(25479551-25479654)
chr1 (387-498)||(30371118-30371230)
chr1 (402-481)||(23902070-23902149)
chr1 (389-465)||(4699605-4699681)
chr1 (388-481)||(28689441-28689536)
chr1 (402-481)||(12564877-12564956)
chr1 (395-478)||(27887114-27887197)
chr1 (389-498)||(7218064-7218174)
chr1 (395-481)||(10199404-10199490)
chr1 (341-498)||(15581224-15581382)
chr1 (388-465)||(19412586-19412663)
chr1 (389-497)||(37842345-37842454)
chr1 (391-456)||(46252674-46252739)
chr1 (387-467)||(3223670-3223749)
chr1 (395-498)||(17269220-17269324)
chr1 (389-477)||(24675986-24676074)
chr1 (388-494)||(17628573-17628680)
chr1 (444-498)||(25006079-25006134)
chr1 (403-462)||(28077073-28077132)
chr1 (403-470)||(35351038-35351105)
chr1 (403-481)||(6659502-6659580)
chr1 (385-479)||(39347953-39348047)
chr1 (417-498)||(49888737-49888819)
chr1 (388-477)||(2234731-2234819)
chr1 (395-476)||(7136994-7137075)
chr1 (389-470)||(10744300-10744381)
chr1 (388-469)||(27140478-27140559)
chr1 (390-467)||(27963361-27963438)
chr1 (332-481)||(28482166-28482315)
chr1 (388-481)||(29007705-29007798)
chr1 (395-476)||(34290229-34290310)
chr1 (389-481)||(37241811-37241904)
chr1 (389-481)||(3924612-3924704)
chr1 (389-469)||(6292493-6292573)
chr1 (397-477)||(14629964-14630044)
chr1 (401-469)||(15558217-15558285)
chr1 (395-479)||(24460403-24460487)
chr1 (376-498)||(30259463-30259587)
chr1 (452-499)||(40394938-40394986)
chr1 (386-441)||(42397752-42397808)
chr1 (395-482)||(3319929-3320015)
chr1 (382-481)||(6231799-6231898)
chr1 (410-469)||(11129245-11129304)
chr1 (395-482)||(12564495-12564582)
chr1 (395-497)||(34405128-34405231)
chr1 (389-481)||(35925674-35925770)
chr1 (441-495)||(37295760-37295815)
chr1 (389-476)||(38247043-38247130)
chr1 (385-420)||(43532593-43532628)
chr1 (384-498)||(45205038-45205153)
chr1 (330-484)||(6981477-6981631)
chr1 (395-468)||(12593449-12593522)
chr1 (388-466)||(15437966-15438044)
chr1 (389-462)||(15942737-15942811)
chr1 (388-458)||(26184759-26184829)
chr1 (393-435)||(34278687-34278729)
chr1 (407-477)||(42556639-42556709)
chr1 (388-477)||(4549222-4549311)
chr1 (434-498)||(5421955-5422020)
chr1 (396-473)||(16981933-16982010)
chr1 (432-481)||(25005830-25005879)
chr1 (388-421)||(26185559-26185592)
chr1 (388-481)||(30285879-30285972)
chr1 (385-430)||(37941971-37942016)
chr1 (389-421)||(3070080-3070112)
chr1 (377-481)||(4622081-4622185)
chr1 (393-421)||(5276341-5276369)
chr1 (408-498)||(5592694-5592785)
chr1 (388-420)||(6976973-6977005)
chr1 (389-496)||(7262508-7262616)
chr1 (389-481)||(15515529-15515621)
chr1 (388-436)||(15579515-15579563)
chr1 (447-498)||(27738228-27738280)
chr1 (389-437)||(31118075-31118123)
chr1 (391-475)||(31294513-31294597)
chr1 (388-495)||(33723371-33723479)
chr1 (425-481)||(33976674-33976730)
chr1 (391-459)||(37593676-37593744)
chr1 (389-421)||(38170680-38170712)
chr1 (445-481)||(47413330-47413366)
chr1 (393-421)||(47917284-47917312)
[»] chr4 (36 HSPs)
chr4 (389-475)||(1137706-1137792)
chr4 (408-498)||(49219109-49219200)
chr4 (388-481)||(24929481-24929574)
chr4 (388-498)||(29263340-29263451)
chr4 (389-481)||(23819077-23819169)
chr4 (451-498)||(6927545-6927593)
chr4 (385-469)||(11264301-11264385)
chr4 (397-481)||(30207569-30207653)
chr4 (332-498)||(2996543-2996710)
chr4 (398-476)||(7694009-7694087)
chr4 (389-491)||(8468926-8469028)
chr4 (341-407)||(12816997-12817063)
chr4 (389-498)||(20936219-20936329)
chr4 (389-462)||(46110210-46110283)
chr4 (403-498)||(17884038-17884134)
chr4 (440-498)||(437473-437532)
chr4 (382-421)||(2225623-2225662)
chr4 (389-476)||(6466036-6466123)
chr4 (444-498)||(27043875-27043930)
chr4 (393-476)||(42121481-42121563)
chr4 (424-498)||(56480318-56480393)
chr4 (415-469)||(11158373-11158427)
chr4 (447-481)||(11842203-11842237)
chr4 (396-470)||(34398682-34398756)
chr4 (393-435)||(46201382-46201424)
chr4 (388-462)||(53673647-53673721)
chr4 (401-467)||(55084483-55084549)
chr4 (388-470)||(24370940-24371024)
chr4 (403-480)||(35405936-35406013)
chr4 (425-481)||(2900328-2900384)
chr4 (389-465)||(30631960-30632036)
chr4 (389-477)||(33534159-33534247)
chr4 (425-481)||(36048521-36048577)
chr4 (396-436)||(36463131-36463171)
chr4 (453-481)||(44019513-44019541)
chr4 (389-469)||(46415782-46415862)
[»] chr2 (57 HSPs)
chr2 (385-462)||(32821816-32821893)
chr2 (389-498)||(29316765-29316875)
chr2 (400-499)||(3235385-3235484)
chr2 (388-498)||(14666518-14666629)
chr2 (388-494)||(43141845-43141952)
chr2 (388-497)||(30552632-30552742)
chr2 (395-498)||(37766768-37766873)
chr2 (389-499)||(9174784-9174896)
chr2 (391-498)||(33942120-33942228)
chr2 (385-460)||(34652022-34652097)
chr2 (388-450)||(41809234-41809296)
chr2 (400-477)||(39236496-39236573)
chr2 (389-466)||(43065440-43065517)
chr2 (393-493)||(43910993-43911094)
chr2 (401-481)||(22681187-22681267)
chr2 (389-460)||(41817177-41817248)
chr2 (388-470)||(9878671-9878753)
chr2 (396-470)||(16867738-16867812)
chr2 (444-497)||(18066099-18066153)
chr2 (393-482)||(10285847-10285936)
chr2 (446-498)||(11513868-11513921)
chr2 (388-481)||(14299620-14299713)
chr2 (341-438)||(16551782-16551879)
chr2 (389-438)||(28677649-28677698)
chr2 (385-430)||(30538159-30538204)
chr2 (389-462)||(35379006-35379079)
chr2 (446-498)||(43199384-43199437)
chr2 (395-497)||(1625871-1625975)
chr2 (392-498)||(3673777-3673885)
chr2 (425-481)||(15780065-15780121)
chr2 (389-469)||(28933824-28933903)
chr2 (389-460)||(787341-787412)
chr2 (394-477)||(6227743-6227826)
chr2 (395-470)||(12147456-12147531)
chr2 (385-444)||(31739958-31740017)
chr2 (392-498)||(35485887-35485994)
chr2 (398-481)||(39983330-39983413)
chr2 (388-438)||(1160660-1160710)
chr2 (389-498)||(5133742-5133852)
chr2 (389-498)||(8017404-8017514)
chr2 (454-499)||(9750915-9750961)
chr2 (389-498)||(28039322-28039432)
chr2 (383-436)||(33525951-33526004)
chr2 (395-448)||(35557121-35557174)
chr2 (389-430)||(45314907-45314948)
chr2 (389-421)||(1056119-1056151)
chr2 (393-493)||(1893275-1893375)
chr2 (390-462)||(1939323-1939395)
chr2 (453-481)||(4550765-4550793)
chr2 (395-467)||(5826219-5826291)
chr2 (385-421)||(19977995-19978031)
chr2 (395-498)||(29300615-29300719)
chr2 (433-477)||(29510584-29510628)
chr2 (389-421)||(32614938-32614970)
chr2 (389-481)||(40158706-40158798)
chr2 (396-460)||(44443330-44443394)
chr2 (389-421)||(44606100-44606132)
[»] chr7 (51 HSPs)
chr7 (396-496)||(44151477-44151578)
chr7 (388-476)||(3610729-3610817)
chr7 (359-479)||(20553093-20553213)
chr7 (340-462)||(7244687-7244810)
chr7 (407-481)||(27378836-27378910)
chr7 (403-476)||(2825235-2825308)
chr7 (352-469)||(4966156-4966273)
chr7 (352-420)||(36537957-36538025)
chr7 (401-481)||(38010702-38010782)
chr7 (388-467)||(9423583-9423662)
chr7 (424-498)||(30456475-30456550)
chr7 (385-481)||(11208437-11208530)
chr7 (399-469)||(24363601-24363671)
chr7 (448-497)||(25296955-25297005)
chr7 (395-449)||(35267382-35267436)
chr7 (388-438)||(39568313-39568363)
chr7 (389-475)||(39771755-39771841)
chr7 (385-498)||(48157106-48157220)
chr7 (385-462)||(42281500-42281577)
chr7 (389-469)||(19719007-19719086)
chr7 (389-481)||(25670576-25670668)
chr7 (389-437)||(28844522-28844570)
chr7 (396-499)||(37064218-37064324)
chr7 (388-460)||(45859516-45859587)
chr7 (386-421)||(8341876-8341911)
chr7 (359-462)||(9038119-9038221)
chr7 (385-444)||(12234875-12234934)
chr7 (402-469)||(15075088-15075155)
chr7 (444-498)||(22296273-22296328)
chr7 (340-462)||(33645901-33646023)
chr7 (370-460)||(39630603-39630694)
chr7 (412-498)||(44910574-44910661)
chr7 (389-481)||(46082022-46082116)
chr7 (390-498)||(46825068-46825179)
chr7 (388-450)||(941559-941621)
chr7 (389-498)||(12110330-12110440)
chr7 (443-492)||(20881680-20881730)
chr7 (389-431)||(20888384-20888426)
chr7 (409-498)||(22283754-22283844)
chr7 (399-473)||(47559601-47559675)
chr7 (388-481)||(3500956-3501048)
chr7 (452-481)||(9527143-9527172)
chr7 (433-497)||(28340878-28340943)
chr7 (388-469)||(39360023-39360104)
chr7 (402-498)||(39907773-39907870)
chr7 (425-498)||(44241830-44241903)
chr7 (389-421)||(1645690-1645722)
chr7 (389-421)||(11048075-11048107)
chr7 (388-420)||(21247975-21248007)
chr7 (377-421)||(29290381-29290425)
chr7 (389-481)||(30535551-30535643)
[»] scaffold0024 (1 HSPs)
scaffold0024 (395-498)||(27546-27650)
[»] chr8 (48 HSPs)
chr8 (388-498)||(4558768-4558879)
chr8 (395-463)||(2458562-2458630)
chr8 (419-498)||(10437855-10437934)
chr8 (388-471)||(38561724-38561807)
chr8 (388-498)||(39551198-39551309)
chr8 (389-498)||(2594987-2595097)
chr8 (386-481)||(43704363-43704460)
chr8 (389-462)||(779051-779124)
chr8 (385-462)||(4055602-4055679)
chr8 (389-466)||(7918436-7918513)
chr8 (389-481)||(29973069-29973162)
chr8 (408-476)||(8062322-8062390)
chr8 (452-500)||(11059748-11059796)
chr8 (397-481)||(28769337-28769421)
chr8 (388-481)||(39866723-39866818)
chr8 (399-498)||(41336645-41336745)
chr8 (389-449)||(41606893-41606953)
chr8 (393-460)||(14949875-14949942)
chr8 (398-477)||(30389091-30389170)
chr8 (440-498)||(34770862-34770921)
chr8 (401-460)||(42215084-42215143)
chr8 (389-435)||(3254259-3254305)
chr8 (387-421)||(4281594-4281628)
chr8 (425-498)||(6509329-6509403)
chr8 (404-498)||(9956819-9956912)
chr8 (359-469)||(11569417-11569527)
chr8 (389-463)||(12851182-12851256)
chr8 (445-498)||(16210932-16210986)
chr8 (388-478)||(30191130-30191220)
chr8 (388-462)||(30259121-30259195)
chr8 (395-469)||(30277241-30277315)
chr8 (388-481)||(7714230-7714323)
chr8 (444-481)||(9834834-9834871)
chr8 (393-430)||(10358617-10358654)
chr8 (388-469)||(11185221-11185302)
chr8 (389-466)||(30918116-30918192)
chr8 (341-421)||(1561325-1561405)
chr8 (389-421)||(4390261-4390293)
chr8 (415-498)||(7918789-7918873)
chr8 (405-469)||(8060669-8060733)
chr8 (440-499)||(8062493-8062553)
chr8 (389-421)||(8629504-8629536)
chr8 (390-438)||(13000415-13000463)
chr8 (388-436)||(25869255-25869303)
chr8 (396-460)||(28784793-28784856)
chr8 (393-481)||(29417698-29417786)
chr8 (426-470)||(30627929-30627973)
chr8 (392-476)||(31862486-31862570)
[»] scaffold0147 (1 HSPs)
scaffold0147 (388-450)||(12693-12755)
[»] scaffold0153 (2 HSPs)
scaffold0153 (385-438)||(6480-6533)
scaffold0153 (385-438)||(13500-13553)
[»] scaffold0003 (1 HSPs)
scaffold0003 (388-466)||(306329-306407)
[»] scaffold0311 (1 HSPs)
scaffold0311 (389-441)||(10607-10659)


Alignment Details
Target: chr6 (Bit Score: 391; Significance: 0; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 10 - 498
Target Start/End: Complemental strand, 2112663 - 2112171
Alignment:
Q  10 tcataggttctccgacaaagattagtcattgttatatgacgatggaaactttgtagccatatcttactaacaataaaattaaagatgtttttaaaactac 109  Q
    ||||| ||||||||||||||||||||||||||||| ||| | ||||||||||||| ||||||| ||| || ||  |||||||||||||||||||||||||    
T  2112663 tcataagttctccgacaaagattagtcattgttatgtgatggtggaaactttgtacccatatcatacaaaaaa--aaattaaagatgtttttaaaactac 2112566  T
Q  110 ctctaaagatttagtctcaaaggtggaacaaccgtttcattcaatgttatctatgcctt-----atttg-aaataaacagttagtttagtttcnnnnnnn 203  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||| |||||||||||| ||||||||||           
T  2112565 gtctaaagatttagtctcaaaggtggaacaaccgtttcattcaatgttatctatgccttcatacatttgaaaataaacagttggtttagtttcaaaaaaa 2112466  T
Q  204 gtaatttaattatacattcgaaagtctacgtgaagagccagttgcaaaatcatttcaaaaagaaaatgaatccataatcagtgactccaagcatgtgatc 303  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2112465 gtaatttaattatacattcgaaagtctatgtgaagagccagttgcaaaatcatttcaaaaagaaaatgaatccataatcagtgactccaagcatgtgatc 2112366  T
Q  304 ttaagctagattcttagatataaagacctatttaaatttatctattgacataaatacttctgagattgttcaaaagatctcatagaaacaacttatgaca 403  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2112365 ttaagctagattcttagatataaagacctatttaaatttatctattgacataaatacttctgagattgttcaaaagatctcatagaaacaacttatgaca 2112266  T
Q  404 tgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaacaatttaactttatttt 498  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2112265 tgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaacaatttaactttatttt 2112171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 498
Target Start/End: Original strand, 281841 - 281948
Alignment:
Q  392 caacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaac 490  Q
    |||||||||||||||  ||||||||||||| | ||||||| || ||| ||||| ||||| ||||||| ||| ||||||| ||||||| |||||| || ||    
T  281841 caacttatgacatgtctataagttgttttcagcttatttccatgagctctctaggatagcttatgaacacagcttatagcttatatgaaaacaagttgac 281940  T
Q  491 tttatttt 498  Q
    ||||||||    
T  281941 tttatttt 281948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 467
Target Start/End: Complemental strand, 4420727 - 4420645
Alignment:
Q  385 atagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaactta 467  Q
    |||||||||| |||||||||||||||||| ||||||| | ||||||| |||||| ||| ||||||| ||| ||||| ||||||    
T  4420727 atagaaacaaattatgacatgttcataagctgttttcagcttatttccataagctctccaagatagcttaggaaaataactta 4420645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 498
Target Start/End: Original strand, 28660755 - 28660860
Alignment:
Q  394 acttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaactt 492  Q
    |||||||||||||| |||| |||||||| |||  |||| ||||||  |  | |||||||||||||||||| ||||| |||||||| ||| ||||||||||    
T  28660755 acttatgacatgtttataaattgttttcagttagtttccataagcttttaaggatagtttatgaaaacaatttataatttatatgaaaataatttaactt 28660854  T
Q  493 tatttt 498  Q
    ||||||    
T  28660855 tatttt 28660860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 385 - 481
Target Start/End: Complemental strand, 2117487 - 2117391
Alignment:
Q  385 atagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    |||||||||| ||||| |||||  ||||| ||||||  | ||||||| |||||| ||||| ||||  ||||||||||||||||||| ||||||||||    
T  2117487 atagaaacaatttatggcatgtctataagctgtttttagcttatttcaataagctctctaggataacttatgaaaacaacttatagattatatgaaa 2117391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 392 - 456
Target Start/End: Original strand, 33080571 - 33080635
Alignment:
Q  392 caacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatg 456  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||||| ||| | |||||||||||    
T  33080571 caacttatgacatgtttataagttattttcagtttatttctataagctctccaggatagtttatg 33080635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 378 - 480
Target Start/End: Complemental strand, 30523750 - 30523649
Alignment:
Q  378 agatctcatagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatat 477  Q
    |||||| || ||||||||||||| |||||||||||| |||||||   | |||||||||| | ||| | ||||| ||||||||| ||||||||| ||||||    
T  30523750 agatcttatggaaacaacttatgccatgttcataagctgttttcaactaatttctataacctctcaaggatagcttatgaaaa-aacttatagcttatat 30523652  T
Q  478 gaa 480  Q
    |||    
T  30523651 gaa 30523649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 481
Target Start/End: Original strand, 9667974 - 9668067
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||||||||||||||| |||||| |||||||   ||||||| |||||| |||  | | ||||||||||||||| || ||| ||||||||||    
T  9667974 gaaacaacttatgacatgtccataagctgttttcaacttatttccataagctctccgaaacagtttatgaaaacaaattgtagcttatatgaaa 9668067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 481
Target Start/End: Original strand, 10616530 - 10616623
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||||||||||||||| | |||||||| ||| | |||||| ||||||| ||| || |||| |||| |||||  |||||| |||||||||||    
T  10616530 gaaacaacttatgacatgtccgtaagttgtgttcagcttatttttataagctctccaaaatagcttattaaaacggcttatattttatatgaaa 10616623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 470
Target Start/End: Original strand, 20377910 - 20377991
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatag 470  Q
    ||||||||||||||||||  ||||||||||||||| |||||||   |||| || || ||| | |||||||||||||||||||    
T  20377910 aaacaacttatgacatgtctataagttgttttcggcttatttcccaaagctctataggatggattatgaaaacaacttatag 20377991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 497
Target Start/End: Complemental strand, 25100119 - 25100014
Alignment:
Q  393 aacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaact 491  Q
    ||||||||||||||||||  | | |||||   |||||||||||||| || |||||||| ||||||||||||||||||  || |||| ||||||||| |||    
T  25100119 aacttatgacatgttcatttgctattttcaacttatttctataagctctttaagatagcttatgaaaacaacttataacttctatgaaaacaatttgact 25100020  T
Q  492 ttattt 497  Q
     |||||    
T  25100019 ctattt 25100014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 437
Target Start/End: Complemental strand, 8010441 - 8010389
Alignment:
Q  385 atagaaacaacttatgacatgttcataagttgttttcggtttatttctataag 437  Q
    |||||||||||| |||||||||||||||| | ||||| |||||||||||||||    
T  8010441 atagaaacaactcatgacatgttcataagctattttcagtttatttctataag 8010389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 462
Target Start/End: Complemental strand, 6647461 - 6647394
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaaca 462  Q
    ||||||||||||||||||| |||||||   ||||||  |||||| ||||||||||| |||||||||||    
T  6647461 cttatgacatgttcataagatgttttcaacttattttcataagctctctaagatagcttatgaaaaca 6647394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 498
Target Start/End: Original strand, 31671087 - 31671174
Alignment:
Q  412 agttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa-caatttaactttatttt 498  Q
    |||||||||| | ||||||  ||||||  |||| ||||||||| ||||||| ||||||| |||||||||| |||||||||||| ||||    
T  31671087 agttgttttcagcttattttcataagctatctaggatagtttacgaaaacagcttatagcttatatgaaaacaatttaactttgtttt 31671174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 403 - 470
Target Start/End: Complemental strand, 33067224 - 33067157
Alignment:
Q  403 atgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatag 470  Q
    |||| ||||| | |||||| ||||||||||| |||| ||| ||||||| |||||||||||||||||||    
T  33067224 atgtccataaatcgttttcagtttatttctacaagctctccaagatagcttatgaaaacaacttatag 33067157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 481
Target Start/End: Complemental strand, 2023652 - 2023558
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttat-gaaaacaacttatagtttatatgaaa 481  Q
    ||||||||||||||| || ||| ||  ||||||| | |||||||||||||| ||| |||| ||||||| ||||| | ||||||| ||||||||||    
T  2023652 gaaacaacttatgacctgatcacaaactgttttcagcttatttctataagctctccaagaaagtttatagaaaatagcttatagcttatatgaaa 2023558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 498
Target Start/End: Complemental strand, 4006794 - 4006684
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatat-gaaacaattt 487  Q
    |||||||||| || |||| |||||||| ||||| | ||||||  |||| | |||   ||||| ||||||||||||||||||| ||||||  |||||||||    
T  4006794 aaacaacttacgatatgtccataagttattttcagcttattttcataacctctcagggatagcttatgaaaacaacttatagcttatataaaaacaattt 4006695  T
Q  488 aactttatttt 498  Q
     ||||||||||    
T  4006694 gactttatttt 4006684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 463
Target Start/End: Original strand, 7931716 - 7931790
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaa 463  Q
    |||||||||||||||||||| |||||||||||| | |||||||  ||||| || || ||||| || |||||||||    
T  7931716 aaacaacttatgacatgttcttaagttgttttcagcttatttccgtaagctctgtaggatagcttttgaaaacaa 7931790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 449
Target Start/End: Complemental strand, 24745497 - 24745439
Alignment:
Q  391 acaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagata 449  Q
    |||||||||||||  |||||||||||||||||| |||||| || |||| ||||||||||    
T  24745497 acaacttatgacaccttcataagttgttttcggcttatttttacaagctctctaagata 24745439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 481
Target Start/End: Complemental strand, 4246491 - 4246398
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||||| ||||||||| |||||| |||||||   |||||| |||| || ||| |  |||| ||||||||||| ||||||| ||||||||||    
T  4246491 gaaacaactcatgacatgtccataagctgttttcaacttatttttatatgctctccataatagcttatgaaaacagcttatagattatatgaaa 4246398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 438
Target Start/End: Complemental strand, 6537023 - 6536978
Alignment:
Q  393 aacttatgacatgttcataagttgttttcggtttatttctataagc 438  Q
    ||||||||||||||||||||||||||||| | ||||||| ||||||    
T  6537023 aacttatgacatgttcataagttgttttcagcttatttccataagc 6536978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 389 - 438
Target Start/End: Complemental strand, 30863326 - 30863277
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagc 438  Q
    |||||||||||||||||| |||||||||||||| | ||| ||||||||||    
T  30863326 aaacaacttatgacatgtacataagttgttttcagcttacttctataagc 30863277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 481
Target Start/End: Original strand, 3181059 - 3181150
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||||||||| ||||| ||||||| ||| ||| ||||||| || ||| ||| ||||||  |||||||||||  |||| ||||||||||||    
T  3181059 aaacaacttatgaaatgtttataagttatttccggcttatttcaat-agctctccaagataacttatgaaaacagtttatggtttatatgaaa 3181150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 461
Target Start/End: Complemental strand, 3528883 - 3528811
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaac 461  Q
    |||||||||||||||||| ||||| ||||||||   ||||||  |||||| ||| ||||||||| ||||||||    
T  3528883 aaacaacttatgacatgtccataacttgttttcatcttattttcataagctctccaagatagttcatgaaaac 3528811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 481
Target Start/End: Original strand, 8035138 - 8035230
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||||||||||||| |||||| ||||||||   ||||||   |||||  |||| ||||  ||||||||||||||| ||| ||||||||||    
T  8035138 aaacaacttatgacatggtcataacttgttttcaacttattttcgtaagctttctaggataacttatgaaaacaacttctagcttatatgaaa 8035230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 467
Target Start/End: Original strand, 10476082 - 10476189
Alignment:
Q  359 acttctgagattgttcaaaagatctcatagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaa 458  Q
    |||||||||| |||| |  ||| || || |||||| || |||||||| || ||| |||||||| | |||||||||| ||| ||| ||||||| |||||||    
T  10476082 acttctgagactgtttatgagagcttatggaaacatctaatgacatgctcgtaaattgttttcagcttatttctat-agctctccaagatagcttatgaa 10476180  T
Q  459 aacaactta 467  Q
    |||||||||    
T  10476181 aacaactta 10476189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 449
Target Start/End: Original strand, 10616703 - 10616763
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagata 449  Q
    ||||| ||||||||||||||||||| ||||||| |||||||| |||||   ||||||||||    
T  10616703 aaacaccttatgacatgttcataagctgttttcagtttatttttataaatcctctaagata 10616763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 481
Target Start/End: Complemental strand, 34403935 - 34403843
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||||||||||||||||||||| |||||||   ||||||| |||||| || ||  | || ||||||||||| ||||| | ||||| ||||    
T  34403935 aaacaacttatgacatgttcataaggtgttttcaccttatttccataagctctttagtacagcttatgaaaacatcttatcgattatacgaaa 34403843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 452
Target Start/End: Original strand, 740875 - 740941
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcgg--tttatttctataagcactctaagatagtt 452  Q
    |||||||||||||||||||||||||||| ||||| |  | ||||||||||||| ||| | |||||||    
T  740875 gaaacaacttatgacatgttcataagttattttcagcatatatttctataagctctccaggatagtt 740941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 481
Target Start/End: Complemental strand, 5623179 - 5623144
Alignment:
Q  446 gatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||| ||||||||||||||||||||||||||||||    
T  5623179 gatagcttatgaaaacaacttatagtttatatgaaa 5623144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 481
Target Start/End: Original strand, 7785732 - 7785824
Alignment:
Q  387 agaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||| ||||||||||||  ||||||||||||| | ||||||| |||||| ||| || ||||   ||||| |||| |||||| ||||||||||    
T  7785732 agaaacagcttatgacatgtctataagttgttttcagcttatttccataagctctccaaaatag--catgaagacaatttatagcttatatgaaa 7785824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 9093597 - 9093656
Alignment:
Q  440 ctctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaactttatttt 498  Q
    |||||||| || ||||||||||| ||||||| ||||| | ||||||||||||||||||||    
T  9093597 ctctaagacagcttatgaaaacagcttatagcttatacgaaaacaatttaactttatttt 9093656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 467
Target Start/End: Complemental strand, 14706831 - 14706776
Alignment:
Q  412 agttgttttcggtttatttctataagcactctaagatagtttatgaaaacaactta 467  Q
    ||||||||||||||||||| ||||||||||| | |||||||  |||||||| ||||    
T  14706831 agttgttttcggtttatttttataagcactccaggatagttcgtgaaaacagctta 14706776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 476
Target Start/End: Original strand, 19275622 - 19275713
Alignment:
Q  385 atagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttata 476  Q
    ||||||| || ||||||||||| || ||| || |||||||||||||| |||||| ||  | ||||| |||||||||||  ||||||| ||||    
T  19275622 atagaaataatttatgacatgtccacaagctgatttcggtttatttccataagctcttcatgatagcttatgaaaacagtttatagtatata 19275713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 498
Target Start/End: Complemental strand, 32976095 - 32975948
Alignment:
Q  352 cataaatacttctgagattgttcaaaagatctcatagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagt 451  Q
    ||||| ||||| ||||| ||||   |||| || ||||||||| |||||||||| | |||||| ||||||| |  |  |||||||| || || | |||||     
T  32976095 cataagtacttgtgagactgtttggaagagcttatagaaacagcttatgacatttccataagctgttttcagcgtgcttctataatcattccaggatagc 32975996  T
Q  452 ttatgaaaacaacttatagtttata-tgaaacaatttaactttatttt 498  Q
    ||||||||||||||||| | || || ||||||| ||| ||||||||||    
T  32975995 ttatgaaaacaacttattgcttctattgaaacagtttgactttatttt 32975948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 481
Target Start/End: Original strand, 7446327 - 7446413
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||| ||| ||| ||||||||||||| | ||||||  |||||| | || |||||| ||||||||||| ||||| | ||||||||||    
T  7446327 cttatcacacgtttataagttgttttcaggttattttcataagccccctgagatagcttatgaaaacagcttatggcttatatgaaa 7446413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 497
Target Start/End: Original strand, 7485121 - 7485167
Alignment:
Q  452 ttatgaaaacaacttatagtttatatg-aaacaatttaactttattt 497  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  7485121 ttatgaaaacaacttatagcttatatgaaaaaaatttaactttattt 7485167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 498
Target Start/End: Complemental strand, 33089586 - 33089476
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaattt 487  Q
    ||||| |||| |||||||| ||||||||||||  | ||||||  ||| || | | ||||||| |||||||||||  |||| ||||| ||  |||||||||    
T  33089586 aaacagcttaggacatgtttataagttgttttacgcttattttcataggctccccaagatagcttatgaaaacagtttatcgtttagatataaacaattt 33089487  T
Q  488 aactttatttt 498  Q
    |||||||||||    
T  33089486 aactttatttt 33089476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 436
Target Start/End: Complemental strand, 821499 - 821458
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataa 436  Q
    |||||||||||||||||||| |||||| | ||||||||||||    
T  821499 cttatgacatgttcataagtcgttttcagcttatttctataa 821458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 413
Target Start/End: Original strand, 4331013 - 4331086
Alignment:
Q  340 tttatctattgacataaatacttctgagattgttcaaaagatctcatagaaacaacttatgacatgttcataag 413  Q
    |||||||||||||||||  |||| |||||||||| |||||| || | ||||| | |||| ||||||| ||||||    
T  4331013 tttatctattgacataagcacttgtgagattgtttaaaagaacttagagaaatagcttaagacatgtccataag 4331086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 427 - 498
Target Start/End: Complemental strand, 1403038 - 1402966
Alignment:
Q  427 atttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaactttatttt 498  Q
    |||||||||||  ||| | ||||| |||||||||||| |||||| ||||||| ||| | ||||||||||||||    
T  1403038 atttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaactttatttt 1402966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 421
Target Start/End: Complemental strand, 4080996 - 4080964
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttc 421  Q
    |||||||||||| ||||||||||||||||||||    
T  4080996 aaacaacttatgccatgttcataagttgttttc 4080964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 20368170 - 20368250
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    ||||||||||||||||||||||||| |  ||||   ||||||  |||||  ||| |||| || ||||||||||||||||||    
T  20368170 aaacaacttatgacatgttcataagctagtttcaacttattttcataagttctccaagaaagcttatgaaaacaacttata 20368250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 498
Target Start/End: Original strand, 20671901 - 20671965
Alignment:
Q  435 aagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaactttatttt 498  Q
    |||| ||||| |||||||||||||||||| ||| || ||||| | ||||||||| ||||||||||    
T  20671901 aagctctctatgatagtttatgaaaacaatttaaagcttatacgaaaacaatttgactttatttt 20671965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 481
Target Start/End: Original strand, 24838769 - 24838825
Alignment:
Q  425 ttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    |||||||||||||| ||| | ||||| |||||||| || ||||||| ||||||||||    
T  24838769 ttatttctataagctctccatgatagcttatgaaatcagcttatagcttatatgaaa 24838825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 392 - 498
Target Start/End: Complemental strand, 4855775 - 4855668
Alignment:
Q  392 caacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatga-aacaatttaac 490  Q
    |||||||||||||||||| ||| ||||||||| |||||||| ||||| || |  ||||||||||||||||||||||||  |||||||| |||||||||||    
T  4855775 caacttatgacatgttcagaagctgttttcggcttatttctgtaagctctttgggatagtttatgaaaacaacttataacttatatgataacaatttaac 4855676  T
Q  491 tttatttt 498  Q
    ||||||||    
T  4855675 tttatttt 4855668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 388 - 480
Target Start/End: Original strand, 15003503 - 15003595
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaa 480  Q
    ||||||||||| ||||||||| ||||||||||||| |||||||| |||||| ||||  ||||| |||||||||| |||||||| |||||||||    
T  15003503 gaaacaacttacgacatgttcgtaagttgttttcgatttatttccataagctctcttggatagcttatgaaaaccacttatagcttatatgaa 15003595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 389 - 481
Target Start/End: Original strand, 12459991 - 12460083
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||||||||||||||||||| |||||||| || ||||||  |||||| ||  ||||||| || |||| |||||||||||||||| |||||    
T  12459991 aaacaacttatgacatgttcatatgttgtttttggcttattttcataagctctgcaagatagcttgtgaagacaacttatagtttatttgaaa 12460083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 332 - 463
Target Start/End: Original strand, 37611148 - 37611279
Alignment:
Q  332 tatttaaatttatctattgacataaatacttctgagattgttcaaaagatctcatagaaacaacttatgacatgttcataagttgttttcggtttatttc 431  Q
    ||||| || ||||||| || || || ||||| ||||||||||  | ||| || ||  ||||||||| ||||||||||||||| ||||||| | |||||||    
T  37611148 tatttgaacttatctactggcacaagtacttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttc 37611247  T
Q  432 tataagcactctaagatagtttatgaaaacaa 463  Q
     |||||| ||| ||||||| ||||||||||||    
T  37611248 cataagctctccaagatagcttatgaaaacaa 37611279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 332 - 463
Target Start/End: Original strand, 37787878 - 37788009
Alignment:
Q  332 tatttaaatttatctattgacataaatacttctgagattgttcaaaagatctcatagaaacaacttatgacatgttcataagttgttttcggtttatttc 431  Q
    ||||| || ||||||| || || || ||||| ||||||||||  | ||| || ||  ||||||||| ||||||||||||||| ||||||| | |||||||    
T  37787878 tatttgaacttatctactggcacaagtacttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttc 37787977  T
Q  432 tataagcactctaagatagtttatgaaaacaa 463  Q
     |||||| ||| ||||||| ||||||||||||    
T  37787978 cataagctctccaagatagcttatgaaaacaa 37788009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 498
Target Start/End: Original strand, 10272417 - 10272531
Alignment:
Q  385 atagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaaca 483  Q
    ||||||||||||||||||||||   |||||||||||| | ||||||  |||| | ||| ||||| | ||||||||||||||||||| ||||| | |||||    
T  10272417 atagaaacaacttatgacatgtctgtaagttgttttcagcttattttcataaactctccaagatggcttatgaaaacaacttatagcttatacgaaaaca 10272516  T
Q  484 atttaactttatttt 498  Q
    |||| |||| |||||    
T  10272517 atttgacttaatttt 10272531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 470
Target Start/End: Original strand, 15402819 - 15402900
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatag 470  Q
    |||||| |||||| ||||||||||||||||||| | | ||||||||| |  |||||| |||| |||||||||||||||||||    
T  15402819 aaacaaattatgatatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatag 15402900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 470
Target Start/End: Complemental strand, 17368756 - 17368675
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatag 470  Q
    ||||||||||||||||||||||| |  |||||| | ||||||| |||| | ||| ||||||| |||||||||||||||||||    
T  17368756 aaacaacttatgacatgttcatatgcagttttcagcttatttccataacctctccaagatagcttatgaaaacaacttatag 17368675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 34205322 - 34205231
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttc-ggtttatttctataagcactct-aagatagtttatgaaaacaacttatagtttatat 477  Q
    ||||||||||||| ||||||||||||||||||||   |||||||| ||||||  | | ||||||| ||||||||||||||||||| ||||||    
T  34205322 gaaacaacttatgtcatgttcataagttgttttcacatttatttccataagctttttcaagatagcttatgaaaacaacttatagcttatat 34205231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 392 - 498
Target Start/End: Complemental strand, 35960490 - 35960384
Alignment:
Q  392 caacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaacaatttaact 491  Q
    ||||||| ||||||| |||||| ||||||  | |||||||| || ||  || | ||||| |||||||| ||||||||||||||||||||| | ||| |||    
T  35960490 caacttacgacatgtccataagatgtttttagcttatttctttacgctttccaggatagcttatgaaatcaacttatagtttatatgaaatagtttgact 35960391  T
Q  492 ttatttt 498  Q
    |||||||    
T  35960390 ttatttt 35960384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 389 - 498
Target Start/End: Complemental strand, 41534519 - 41534412
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaacaattta 488  Q
    ||||| ||||||||  ||||||||| ||||||| | ||||||||  |||  ||| || |||| ||||||||||||||||||| ||  |||||||||||||    
T  41534519 aaacagcttatgac--gttcataagctgttttcagattatttcttcaagttctcaaaaatagcttatgaaaacaacttatagcttccatgaaacaattta 41534422  T
Q  489 actttatttt 498  Q
     |||||||||    
T  41534421 gctttatttt 41534412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 481
Target Start/End: Original strand, 40205064 - 40205154
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||| ||||| |||||| |||||  ||||||| | |||||||||||||| ||| | ||||| ||||||||||||||  ||||||||||||||    
T  40205064 aaacagcttataacatgtccataatctgttttcagcttatttctataagctctccaggatagcttatgaaaacaact--tagtttatatgaaa 40205154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 498
Target Start/End: Complemental strand, 2568738 - 2568627
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg--aaacaatt 486  Q
    ||||| |||||||||| |||||||||| ||||  | ||||||  || ||| ||| | ||||| ||||||||||||||||||| ||||| |  ||||||||    
T  2568738 aaacagcttatgacatattcataagttatttttagcttattttcattagctctccatgatagcttatgaaaacaacttatagcttatacgaaaaacaatt 2568639  T
Q  487 taactttatttt 498  Q
    ||||||| ||||    
T  2568638 taactttgtttt 2568627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 427 - 498
Target Start/End: Original strand, 12595768 - 12595840
Alignment:
Q  427 atttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaactttatttt 498  Q
    |||||||||||| || |||| ||| |||||||| || || |||||||||||| ||||||||||||||||||||    
T  12595768 atttctataagctctttaaggtagcttatgaaaccagctcatagtttatatgaaaacaatttaactttatttt 12595840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 477
Target Start/End: Original strand, 32194073 - 32194157
Alignment:
Q  393 aacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatat 477  Q
    |||||||||||| | |||||||||||||| | |||||| ||||||| ||| ||||||| |||  |||||| ||||||| ||||||    
T  32194073 aacttatgacatttccataagttgttttcagcttatttatataagctctcaaagatagcttaaaaaaacatcttatagcttatat 32194157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 481
Target Start/End: Complemental strand, 19369372 - 19369301
Alignment:
Q  410 taagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    |||| |||||||  ||||||||||||||| ||||  || ||||||||||| || ||||||||||||||||||    
T  19369372 taagctgttttcaatttatttctataagctctctgggaaagtttatgaaaccagcttatagtttatatgaaa 19369301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 391 - 481
Target Start/End: Original strand, 37690628 - 37690719
Alignment:
Q  391 acaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatag-tttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||| ||||||||||| ||||| ||||||| | ||||||| |||||| ||| |  |||  |||||||||||||||||||| ||||||||||    
T  37690628 acaacctatgacatgttaataagctgttttcagcttatttccataagctctccataataactttatgaaaacaacttatagcttatatgaaa 37690719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 498
Target Start/End: Original strand, 41957440 - 41957551
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatt 486  Q
    |||||| |||||||||||| ||||||||||||||   ||||||  |||||  ||| | ||||| ||||||||||| ||||||  ||| ||| ||||||||    
T  41957440 gaaacagcttatgacatgtccataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaacagcttataacttacatgaaaacaatt 41957539  T
Q  487 taactttatttt 498  Q
    |||||| |||||    
T  41957540 taacttcatttt 41957551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 481
Target Start/End: Original strand, 2569691 - 2569777
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    |||||||||||| |||||| ||||||  |||||| |  ||||||  | || ||||||||||||||||| ||||||| ||||||||||    
T  2569691 cttatgacatgtccataagctgttttaagtttatattcataagctttttatgatagtttatgaaaacagcttatagattatatgaaa 2569777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 469
Target Start/End: Original strand, 18543193 - 18543266
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    |||||||||||| ||| |||||||||| | ||||||| |||||| ||| | ||||| ||||||||||||||||||    
T  18543193 cttatgacatgtccatgagttgttttcagcttatttc-ataagctctccaggatagcttatgaaaacaacttata 18543266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 470
Target Start/End: Original strand, 33533536 - 33533610
Alignment:
Q  396 ttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatag 470  Q
    ||||||||| ||||||||||||||||   ||||||| |||||| ||| ||||||| || |||||||| |||||||    
T  33533536 ttatgacatattcataagttgttttcaacttatttccataagctctccaagatagcttgtgaaaacaccttatag 33533610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 481
Target Start/End: Original strand, 37526191 - 37526281
Alignment:
Q  391 acaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||| ||||||||||| ||||| ||||||| | ||||||| |||||| ||| |  | |  ||||||||||||||||||| ||||||||||    
T  37526191 acaacctatgacatgttaataagctgttttcagcttatttccataagctctccagaacaacttatgaaaacaacttatagcttatatgaaa 37526281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 481
Target Start/End: Original strand, 37588352 - 37588442
Alignment:
Q  391 acaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||| ||||| ||||| ||||| ||||||| | ||||||| |||||| ||| |  |||  ||||||||||||||||||| ||||||||||    
T  37588352 acaacctatgaaatgttaataagctgttttcagcttatttccataagctctccagaataacttatgaaaacaacttatagcttatatgaaa 37588442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 452 - 485
Target Start/End: Complemental strand, 14961949 - 14961916
Alignment:
Q  452 ttatgaaaacaacttatagtttatatgaaacaat 485  Q
    ||||||||||||||||||||||||||||||||||    
T  14961949 ttatgaaaacaacttatagtttatatgaaacaat 14961916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 468
Target Start/End: Original strand, 17258879 - 17258952
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttat 468  Q
    ||||||||||||||||||| ||||||| | ||||||  |||||| ||  | ||||||||||||||||| |||||    
T  17258879 cttatgacatgttcataagctgttttcagcttattttcataagctcttcaggatagtttatgaaaacagcttat 17258952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 18704025 - 18704114
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatat 477  Q
    |||||||||||| ||||||  ||||||||||||| | ||||||| |||||  || |   |||| ||||||||||||||||||| ||||||    
T  18704025 gaaacaacttataacatgtctataagttgttttcagcttatttccataagatctttgtaatagcttatgaaaacaacttatagcttatat 18704114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 481
Target Start/End: Complemental strand, 29054973 - 29054896
Alignment:
Q  404 tgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    |||||||||||||| | |  |||||||| |||||| ||  | ||||||||||| ||||||||||||| ||||||||||    
T  29054973 tgttcataagttgtgtacaatttatttccataagctctacatgatagtttatggaaacaacttatagcttatatgaaa 29054896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 389 - 470
Target Start/End: Complemental strand, 34690953 - 34690872
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatag 470  Q
    |||||| || |||||||| ||||||||||| |||  ||||||| |||||| ||| ||||| | |||||| ||||||||||||    
T  34690953 aaacaaattgtgacatgtccataagttgttatcgacttatttccataagctctccaagatggcttatgagaacaacttatag 34690872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 498
Target Start/End: Original strand, 9202736 - 9202848
Alignment:
Q  388 gaaacaacttatgacat-gttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa-caat 485  Q
    |||||| |||||||||| ||||||||| ||||| | | ||||||  |||||  ||  ||||||  ||||||||||| ||||| | |||||||||| ||||    
T  9202736 gaaacagcttatgacattgttcataagctgtttccagcttattttcataagttcttcaagataacttatgaaaacagcttattgcttatatgaaaacaat 9202835  T
Q  486 ttaactttatttt 498  Q
    |||||||||||||    
T  9202836 ttaactttatttt 9202848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 481
Target Start/End: Original strand, 13604839 - 13604931
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||| |||||||||||| |||| |||||||||   ||||||  |||||| ||  ||||||  ||||||||||| |||| |||||||||||||    
T  13604839 aaacagcttatgacatgtccatacgttgttttcaacttattttcataagctcttcaagataacttatgaaaacagcttaaagtttatatgaaa 13604931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 481
Target Start/End: Original strand, 19138714 - 19138801
Alignment:
Q  396 ttatgacatgttcataagttgttttcggtttatttctataagcactc--taagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||||||| ||||| |||||||| | ||||||| |||||| |||  ||  |||| ||||||||||||||||||| |||| |||||    
T  19138714 ttatgacatgtacataaattgttttcagcttatttccataagctctccatataatagcttatgaaaacaacttatagcttatctgaaa 19138801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 30217149 - 30217081
Alignment:
Q  402 catgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatag 470  Q
    ||||| ||||||||||||| |||||||||| |||||| ||| | ||||| |||||||| || |||||||    
T  30217149 catgtccataagttgttttaggtttatttccataagctctccaggatagcttatgaaagcagcttatag 30217081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 495
Target Start/End: Complemental strand, 7319466 - 7319379
Alignment:
Q  409 ataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa-caatttaactttat 495  Q
    |||||||| |||| | |||||| ||||||  ||| ||||||| ||| |||||||  |||||| |||||||||| ||||||||||||||    
T  7319466 ataagttgctttcagcttatttttataagttctccaagatagcttacgaaaacagtttatagcttatatgaaaacaatttaactttat 7319379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 498
Target Start/End: Complemental strand, 7674729 - 7674618
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatt 486  Q
    |||||||||||||||||||| ||||| ||||||| | ||||||  | ||   ||| ||||||| |||||||||||  |||| | ||||| | ||||||||    
T  7674729 gaaacaacttatgacatgtttataaggtgttttcagcttattttcacaaattctccaagatagcttatgaaaacattttatggcttataagaaaacaatt 7674630  T
Q  487 taactttatttt 498  Q
    ||| ||||||||    
T  7674629 taaatttatttt 7674618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 463
Target Start/End: Original strand, 12242699 - 12242774
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaa 463  Q
    |||| |||||||||||||  ||| |||||||||| | ||| ||| |||||| ||| ||||||| ||||||||||||    
T  12242699 gaaaaaacttatgacatgaacattagttgttttcagcttacttccataagctctccaagatagcttatgaaaacaa 12242774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 430
Target Start/End: Original strand, 15405948 - 15406043
Alignment:
Q  335 ttaaatttatctattgacataaatacttctgagattgttcaaaagatctcatagaaacaacttatgacatgttcataagttgttttcggtttattt 430  Q
    ||||| ||||||||||| ||||| |||| |||||  ||||| |||| || |   ||||| ||||||||||||||||||| |||||||  |||||||    
T  15405948 ttaaacttatctattgatataaacacttttgagacggttcagaagaacttaccaaaacagcttatgacatgttcataagctgttttcaatttattt 15406043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 469
Target Start/End: Complemental strand, 29659410 - 29659351
Alignment:
Q  410 taagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    |||||||||||| | |||||| ||||| | ||||||||||  ||||||||||||||||||    
T  29659410 taagttgttttcagcttatttatataaactctctaagataacttatgaaaacaacttata 29659351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 498
Target Start/End: Original strand, 39257411 - 39257486
Alignment:
Q  423 gtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaacaatttaactttatttt 498  Q
    |||||| || |||||| ||| | ||| | ||||||||||||||||||||||||||||||   ||| ||||||||||    
T  39257411 gtttatatcaataagctctccatgattgcttatgaaaacaacttatagtttatatgaaaaggtttgactttatttt 39257486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 463
Target Start/End: Complemental strand, 11457226 - 11457105
Alignment:
Q  341 ttatctattgacataaatacttctgagattgttcaaaagatctcatagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcac 440  Q
    |||||||||| || ||| |||| ||||| ||||   |||| || || ||||||||||||||||||| |||||| || ||||   |||||||||||||| |    
T  11457226 ttatctattggcagaaacacttgtgagactgttttgaagagcttatggaaacaacttatgacatgtccataagctg-tttcatattatttctataagctc 11457128  T
Q  441 tctaagatagtttatgaaaacaa 463  Q
    || ||||||  || |||||||||    
T  11457127 tccaagataacttttgaaaacaa 11457105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 498
Target Start/End: Complemental strand, 12425631 - 12425541
Alignment:
Q  409 ataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaactttatttt 498  Q
    |||||||||||||   ||||||  |||||  ||| ||||||| || |||||||| ||||||| ||||| | ||||||||||||||||||||    
T  12425631 ataagttgttttcaacttattttcataagttctccaagatagcttgtgaaaacagcttatagcttatacgaaaacaatttaactttatttt 12425541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 438
Target Start/End: Original strand, 17369428 - 17369478
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagc 438  Q
    |||||| ||||||||||||  ||||||||||||| | ||||||||||||||    
T  17369428 gaaacagcttatgacatgtctataagttgttttcagattatttctataagc 17369478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 459
Target Start/End: Original strand, 38104867 - 38104917
Alignment:
Q  409 ataagttgttttcggtttatttctataagcactctaagatagtttatgaaa 459  Q
    ||||||||||||| | ||||||| |||||| ||||||||||| ||||||||    
T  38104867 ataagttgttttcagcttatttccataagctctctaagatagcttatgaaa 38104917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 469
Target Start/End: Complemental strand, 40534273 - 40534199
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    |||||||||||||||||| | ||||||   ||| ||| |||||| ||||  ||||| ||||||||||||||||||    
T  40534273 cttatgacatgttcataattagttttcatcttacttccataagctctctgggatagcttatgaaaacaacttata 40534199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 481
Target Start/End: Original strand, 10125708 - 10125801
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaactt-atagtttatatgaaa 481  Q
    ||||||||||||||||||| ||||| ||||||| | ||||||  |||||| ||| | | ||  ||||||||| ||||| |||||||||| ||||    
T  10125708 aaacaacttatgacatgttgataaggtgttttcagcttattttcataagctctccatggtaacttatgaaaataacttaatagtttataagaaa 10125801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 11707128 - 11707055
Alignment:
Q  396 ttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    |||||||||||| ||||||||||||| | ||||||  | |||| ||  ||||||| ||||||||||| ||||||    
T  11707128 ttatgacatgtttataagttgttttcagcttattttcaaaagctctacaagatagcttatgaaaacagcttata 11707055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 462
Target Start/End: Complemental strand, 36638819 - 36638754
Alignment:
Q  397 tatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaaca 462  Q
    ||||||||||||||||| | ||||| | ||||||| |||||| ||||| ||||  |||||||||||    
T  36638819 tatgacatgttcataagcttttttcagcttatttccataagctctctaggataacttatgaaaaca 36638754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 430
Target Start/End: Complemental strand, 41830932 - 41830891
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttattt 430  Q
    |||||||||||||| |||||||| ||||||||| ||||||||    
T  41830932 aaacaacttatgacgtgttcatatgttgttttccgtttattt 41830891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 408
Target Start/End: Complemental strand, 7856676 - 7856601
Alignment:
Q  332 tatttaaatttatctattgacataaatacttctgagattgttcaaaagatctcatagaaacaacttatgacatgttc 408  Q
    ||||| ||||||| |||||||| ||| ||||  ||||||||| ||| || || ||| ||||||||||||||||||||    
T  7856676 tatttgaatttatttattgacaaaaacacttgcgagattgtttaaa-gaacttataaaaacaacttatgacatgttc 7856601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 498
Target Start/End: Original strand, 28586762 - 28586866
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaacttt 493  Q
    |||||||||| | | |||| ||||||| | ||||||| |||||| ||||| ||||| |  | |||||| |||||| |||||||| ||||| ||| |||||    
T  28586762 cttatgacatatccgtaagctgttttcagcttatttcgataagctctctaggatagctcgtcaaaacagcttataatttatatgaaaacagtttgacttt 28586861  T
Q  494 atttt 498  Q
    |||||    
T  28586862 atttt 28586866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 495
Target Start/End: Complemental strand, 41419342 - 41419294
Alignment:
Q  447 atagtttatgaaaacaacttatagtttatatgaaacaatttaactttat 495  Q
    |||| ||||||||||||||||||| ||| |||| |||||||| ||||||    
T  41419342 atagcttatgaaaacaacttatagcttacatgatacaatttagctttat 41419294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 9e-25; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 341 - 483
Target Start/End: Complemental strand, 43115184 - 43115042
Alignment:
Q  341 ttatctattgacataaatacttctgagattgttcaaaagatctcatagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcac 440  Q
    ||||||||||||||||  |||| ||||||||||   ||||  | || ||||||||||||||||||| ||||| |||||||| | ||||||| |||||| |    
T  43115184 ttatctattgacataatcacttgtgagattgtttggaagagtttatggaaacaacttatgacatgtccataacttgttttcagcttatttccataagctc 43115085  T
Q  441 tctaagatagtttatgaaaacaacttatagtttatatgaaaca 483  Q
    || | ||||||| ||||||||||||||||| |||||| |||||    
T  43115084 tcaatgatagttcatgaaaacaacttatagcttatataaaaca 43115042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 389 - 476
Target Start/End: Original strand, 54837024 - 54837111
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttata 476  Q
    ||||| |||||||||||||||||| |||||||| | |||||| |||||||  || ||||||| ||||||||| |||||| ||||||||    
T  54837024 aaacagcttatgacatgttcataacttgttttccgcttatttttataagctgtccaagatagcttatgaaaataacttacagtttata 54837111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 498
Target Start/End: Original strand, 33883748 - 33883849
Alignment:
Q  397 tatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaacaatttaactttatt 496  Q
    ||||||||||||||||||||||||| | ||||||  |||||  ||||||||||| ||||| ||||||| ||||||| |||  ||| | | ||||||||||    
T  33883748 tatgacatgttcataagttgttttcagcttattttcataagttctctaagatagcttatgtaaacaacatatagttcatacaaaaaattgtaactttatt 33883847  T
Q  497 tt 498  Q
    ||    
T  33883848 tt 33883849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 497
Target Start/End: Complemental strand, 50952413 - 50952304
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaact-tatagtttatatgaaacaattt 487  Q
    ||||| ||||||||||||||||||  ||||||  | ||||||| |||||| ||| |||||||||||| | ||||||| ||||| ||||||||||  | ||    
T  50952413 aaacagcttatgacatgttcataaactgttttaagcttatttccataagctctccaagatagtttattacaacaactatatagcttatatgaaaacaatt 50952314  T
Q  488 aactttattt 497  Q
    ||||||||||    
T  50952313 aactttattt 50952304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 498
Target Start/End: Original strand, 53848058 - 53848162
Alignment:
Q  394 acttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatat-gaaacaatttaactt 492  Q
    |||| |||||||| |||||| ||||||||| |||||||||||||| ||||  ||||||||||||||| ||| | ||| ||||||  ||||||||| ||||    
T  53848058 acttgtgacatgtccataagctgttttcggcttatttctataagctctctgggatagtttatgaaaataac-tgtagcttatatcaaaacaatttgactt 53848156  T
Q  493 tatttt 498  Q
    ||||||    
T  53848157 tatttt 53848162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 389 - 499
Target Start/End: Complemental strand, 21367748 - 21367636
Alignment:
Q  389 aaacaacttatgacat-gttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatt 486  Q
    ||||| |||||||||| ||||| ||| ||||||| | ||||||  |||||  ||| ||||||| ||||||||||||||||||  ||||| | ||||||||    
T  21367748 aaacagcttatgacattgttcacaagctgttttcagcttattttcataagttctccaagatagcttatgaaaacaacttatacattatacgaaaacaatt 21367649  T
Q  487 taactttattttt 499  Q
    |||||||||||||    
T  21367648 taactttattttt 21367636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 495
Target Start/End: Original strand, 39602206 - 39602306
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaacaatttaacttta 494  Q
    |||||||||||||||||| ||||||||   ||||||  |||||  ||| ||||||| ||||||||||| ||||||  ||||| | |||||||||||||||    
T  39602206 cttatgacatgttcataaattgttttcaacttattttcataagttctcaaagatagcttatgaaaacagcttataacttatacgcaacaatttaacttta 39602305  T
Q  495 t 495  Q
    |    
T  39602306 t 39602306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 498
Target Start/End: Original strand, 36646371 - 36646482
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatt 486  Q
    ||||| ||||||| ||||| |||||| |||||||   |||||||||||| | ||||| ||||| |||||||||||| |||||  ||||||| ||||||||    
T  36646371 gaaaccacttatggcatgtccataagctgttttcatcttatttctataaactctctaggatagcttatgaaaacaagttataacttatatgaaaacaatt 36646470  T
Q  487 taactttatttt 498  Q
      ||||||||||    
T  36646471 atactttatttt 36646482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 425 - 498
Target Start/End: Original strand, 10101502 - 10101576
Alignment:
Q  425 ttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaactttatttt 498  Q
    |||||||||||||| ||||||||  | ||||||||||||||| ||  ||||||| ||||||||||||||||||||    
T  10101502 ttatttctataagctctctaagagggcttatgaaaacaacttttatcttatatgaaaacaatttaactttatttt 10101576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 425 - 498
Target Start/End: Original strand, 10212427 - 10212501
Alignment:
Q  425 ttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaactttatttt 498  Q
    |||||||||||||| ||||||||  | ||||||||||||||| ||  ||||||| ||||||||||||||||||||    
T  10212427 ttatttctataagctctctaagagggcttatgaaaacaacttttatcttatatgaaaacaatttaactttatttt 10212501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 396 - 500
Target Start/End: Complemental strand, 20669692 - 20669586
Alignment:
Q  396 ttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaactt-t 493  Q
    |||||| |||| |||| | ||||||| ||||||||  |  ||| |||||||||||||||||||||| | |||||| ||||||| |||||||||||||| |    
T  20669692 ttatgatatgtccatagggtgttttcagtttattttcaggagctctctaagatagtttatgaaaacgaattatagcttatatgaaaacaatttaacttgt 20669593  T
Q  494 atttttg 500  Q
    |||||||    
T  20669592 atttttg 20669586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 389 - 498
Target Start/End: Complemental strand, 21574570 - 21574461
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaattt 487  Q
    ||||||||||||||||||||||||| || |||  | ||||||| |||||| ||| | | ||| |||| |||| || |||||| ||||||| |||||||||    
T  21574570 aaacaacttatgacatgttcataagctgcttttagcttatttccataagctctccatgttagcttat-aaaaaaagttatagcttatatgtaaacaattt 21574472  T
Q  488 aactttatttt 498  Q
    |||||||||||    
T  21574471 aactttatttt 21574461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 388 - 462
Target Start/End: Complemental strand, 37273215 - 37273141
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaaca 462  Q
    ||||||||||||||||||| ||||||||||||||   ||||||| |||||  ||| ||||||| |||||||||||    
T  37273215 gaaacaacttatgacatgtccataagttgttttcaacttatttccataagttctccaagatagcttatgaaaaca 37273141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 481
Target Start/End: Complemental strand, 2318713 - 2318632
Alignment:
Q  401 acatgttcataagttgttttcggtttatttctataagcactctaaga-tagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||| ||| ||||||||||| | |||||||||||||| ||| |||| ||  |||| |||||||||||||||||||||||||    
T  2318713 acatggtcagaagttgttttcagcttatttctataagctctccaagaataacttataaaaacaacttatagtttatatgaaa 2318632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 498
Target Start/End: Complemental strand, 10357512 - 10357403
Alignment:
Q  390 aacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaattta 488  Q
    |||||||||||||||||  ||||| | ||||||  |||||||  ||||| ||||||||| | ||||||||||||||| ||  ||||||| ||| ||||||    
T  10357512 aacaacttatgacatgtatataagctattttcgagttatttcagtaagctctctaagatggcttatgaaaacaacttgtatcttatatgaaaaaaattta 10357413  T
Q  489 actttatttt 498  Q
    || |||||||    
T  10357412 acattatttt 10357403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 462
Target Start/End: Complemental strand, 31010486 - 31010409
Alignment:
Q  385 atagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaaca 462  Q
    |||||||||||||||||||||| |||||| ||||||| | ||| ||| |||||| ||||| ||||| ||| |||||||    
T  31010486 atagaaacaacttatgacatgtccataagctgttttcagcttaattccataagctctctatgataggttacgaaaaca 31010409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 20669244 - 20669172
Alignment:
Q  397 tatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    ||||||||||||||||| ||||||| | ||||||  |||||| ||| ||||||| ||||||||||| ||||||    
T  20669244 tatgacatgttcataagctgttttccgcttatttacataagctctccaagatagcttatgaaaacagcttata 20669172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 481
Target Start/End: Complemental strand, 27792932 - 27792860
Alignment:
Q  409 ataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||||||||| | |||||||||||||| ||  | |||||||||||||||||||||  || ||||||||||    
T  27792932 ataagttgttttcagcttatttctataagctctacatgatagtttatgaaaacaacttgcagcttatatgaaa 27792860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 494
Target Start/End: Complemental strand, 41724293 - 41724185
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggttta-tttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa-caat 485  Q
    ||||||||||||||||||| |||||||||||||| | ||| ||| ||||||| ||| | ||||| | |||||||||  |||||| |||||| ||| ||||    
T  41724293 gaaacaacttatgacatgtccataagttgttttcagcttattttatataagctctcaaggatagctgatgaaaacagtttatagcttatataaaaccaat 41724194  T
Q  486 ttaacttta 494  Q
    |||| ||||    
T  41724193 ttaaattta 41724185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 469
Target Start/End: Complemental strand, 40665500 - 40665429
Alignment:
Q  398 atgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    |||||||||||||||| ||||||| | |||||| ||||||| ||| ||||||  ||||||||||| ||||||    
T  40665500 atgacatgttcataagctgttttcagcttatttttataagctctccaagataacttatgaaaacatcttata 40665429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 396 - 498
Target Start/End: Original strand, 45432936 - 45433039
Alignment:
Q  396 ttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaacttta 494  Q
    |||||||||||||||||||||||||| | ||||||| |||||| ||  | |||   || ||||||||| |||||| | ||||| |||||||||||||| |    
T  45432936 ttatgacatgttcataagttgttttcagcttatttccataagctctacaggatgacttgtgaaaacaatttatagctcatatgaaaacaatttaacttca 45433035  T
Q  495 tttt 498  Q
    ||||    
T  45433036 tttt 45433039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 459
Target Start/End: Original strand, 2152168 - 2152238
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaa 459  Q
    |||||||||||||||||||| |||| |||||||   || ||||||||||| ||| | ||||||||||||||    
T  2152168 aaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 2152238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 498
Target Start/End: Original strand, 19679318 - 19679428
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaattt 487  Q
    ||||||||||||||||| | | ||| ||||| | | |||||||| | | | ||| |||||||||||| |||||||||||||| ||||| | ||||| |||    
T  19679318 aaacaacttatgacatgctaaaaagctgtttgcagcttatttcttttaactctccaagatagtttataaaaacaacttatagcttataagaaaacagttt 19679417  T
Q  488 aactttatttt 498  Q
     ||||||||||    
T  19679418 gactttatttt 19679428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 481
Target Start/End: Original strand, 22214659 - 22214741
Alignment:
Q  399 tgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    |||||||| |||||| ||||||| | |||||||  |||   ||||| ||||| ||||||||||||||||||| ||||||||||    
T  22214659 tgacatgtccataagctgttttcagcttatttccgtaatgtctctaggatagcttatgaaaacaacttataggttatatgaaa 22214741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 462
Target Start/End: Original strand, 30923887 - 30923961
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaaca 462  Q
    |||||| ||||||||||||  ||||| ||||||| | |||||||||||| | ||||| ||||| |||||||||||    
T  30923887 gaaacagcttatgacatgtctataagctgttttcagcttatttctataaactctctaggataggttatgaaaaca 30923961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 1810058 - 1810009
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataag 437  Q
    ||||||||||||||||||| ||| |||||||||| | |||||||||||||    
T  1810058 gaaacaacttatgacatgtccatgagttgttttctgcttatttctataag 1810009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 476
Target Start/End: Complemental strand, 24785279 - 24785198
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttata 476  Q
    ||||||||||||||||||||||||||  | ||||||  |||||| ||| | ||||| |||||||||||  |||||| |||||    
T  24785279 cttatgacatgttcataagttgtttttagcttatttacataagctctcgaggatagcttatgaaaacacgttatagattata 24785198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 498
Target Start/End: Original strand, 33405160 - 33405267
Alignment:
Q  393 aacttatgacatgttcataagttgttttcggttta--tttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaa 489  Q
    ||||||||| ||||||||||  ||||||||| |||  |||| |||||  ||  ||||||| ||||||||||| ||||||| ||||||| |||||| ||||    
T  33405160 aacttatgatatgttcataaactgttttcggcttaactttc-ataagttcttcaagatagcttatgaaaacagcttatagcttatatgaaaacaaattaa 33405258  T
Q  490 ctttatttt 498  Q
    |||||||||    
T  33405259 ctttatttt 33405267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 389 - 438
Target Start/End: Complemental strand, 42745118 - 42745069
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagc 438  Q
    |||||||||||||||||||||||||||||||||   ||||||| ||||||    
T  42745118 aaacaacttatgacatgttcataagttgttttcatcttatttccataagc 42745069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 389 - 497
Target Start/End: Complemental strand, 52619083 - 52618974
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaattt 487  Q
    |||||| |||||||||||||||||| | |||||   ||||||  | |||| ||  ||||||| || |||||||| ||||||  ||||||| |||||||||    
T  52619083 aaacaatttatgacatgttcataagctattttcaccttattttcacaagctcttcaagatagcttgtgaaaacagcttataacttatatgaaaacaattt 52618984  T
Q  488 aactttattt 497  Q
    ||||||||||    
T  52618983 aactttattt 52618974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 498
Target Start/End: Original strand, 12923321 - 12923425
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa-caatttaacttt 493  Q
    |||||||||||| |||||||||||||| | |||||| || |||   |||||| ||  ||| ||||||||||||||| ||||| |||| || ||| |||||    
T  12923321 cttatgacatgtccataagttgttttcagcttatttatagaagttttctaaggtaacttaggaaaacaacttatagcttataagaaagcagtttgacttt 12923420  T
Q  494 atttt 498  Q
    |||||    
T  12923421 atttt 12923425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 481
Target Start/End: Original strand, 14548711 - 14548803
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||| |||||||| || ||| | ||||||| | ||||||| |||||| ||| |  |||  ||||||||||||||||||| ||||||||||    
T  14548711 aaacaacgtatgacattttaataggctgttttcagcttatttccataagctctccagaataacttatgaaaacaacttatagcttatatgaaa 14548803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 477
Target Start/End: Original strand, 40880938 - 40881026
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatat 477  Q
    |||||||||||||||||  | |||||||||||    |||||| |||||   ||||| |||||||||||||||||| |||||| ||||||    
T  40880938 aaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 40881026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 469
Target Start/End: Complemental strand, 43875549 - 43875465
Alignment:
Q  385 atagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    ||||||||||||||||| | || |||||||||||||| | ||||||| |||||  ||| | ||||| |||||| |||| ||||||    
T  43875549 atagaaacaacttatgatacgtccataagttgttttctgattatttccataagttctccaggatagcttatgagaacatcttata 43875465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 54180767 - 54180843
Alignment:
Q  386 tagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaaca 462  Q
    |||||||| |||||||||||| |||||||||||||  | |||||| ||||||| ||| |  |||| |||||||||||    
T  54180767 tagaaacagcttatgacatgtccataagttgtttttagcttatttatataagctctccataatagcttatgaaaaca 54180843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 475
Target Start/End: Original strand, 26808184 - 26808271
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttat 475  Q
    |||||||||||||||||||| ||||  ||||||  | ||||||||| | ||  |||| ||||||||||||||| |  |||||||||||    
T  26808184 gaaacaacttatgacatgtttataaactgttttgagcttatttctacatgctttctaggatagtttatgaaaatagtttatagtttat 26808271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 476
Target Start/End: Original strand, 33725860 - 33725951
Alignment:
Q  385 atagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttata 476  Q
    |||||| |||||||||||||||| ||| | |||||||   ||||||||||||||  || | |||||||||| ||||||  |||||| |||||    
T  33725860 atagaagcaacttatgacatgttgatatgctgttttcatcttatttctataagctttccaggatagtttataaaaacagtttatagcttata 33725951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 479
Target Start/End: Complemental strand, 43875716 - 43875638
Alignment:
Q  403 atgttcataagttgttttcggtttatttc--tataagcactctaagatagtttatgaaaacaacttatagtttatatga 479  Q
    |||| |||||| |||||||| |||||||   ||||||| ||| | ||||| ||||||||||||||||||| ||||||||    
T  43875716 atgtccataagctgttttcgttttattttcatataagctctccatgatagcttatgaaaacaacttatagcttatatga 43875638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 431
Target Start/End: Complemental strand, 1833806 - 1833764
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttc 431  Q
    ||||||||||| | ||||||||||||| |||||||||||||||    
T  1833806 aaacaacttataatatgttcataagttattttcggtttatttc 1833764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 462
Target Start/End: Original strand, 13709820 - 13709886
Alignment:
Q  396 ttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaaca 462  Q
    |||||||| || |||||||||||||| ||||||||| |||| | ||| | ||||| |||||||||||    
T  13709820 ttatgacaagtccataagttgttttcagtttatttcaataaactctccaggatagcttatgaaaaca 13709886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 498
Target Start/End: Original strand, 22214735 - 22214781
Alignment:
Q  453 tatgaaaacaacttatagtttatatgaa-acaatttaactttatttt 498  Q
    |||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  22214735 tatgaaaacaacttataggttatatgaatacaatttcactttatttt 22214781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 459
Target Start/End: Complemental strand, 23793663 - 23793594
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaa 459  Q
    |||||||||||||||  || ||||||||||||| | ||||||||||||||  || ||||||| ||||||||    
T  23793663 aaacaacttatgacaactt-ataagttgttttcagcttatttctataagctttccaagatagcttatgaaa 23793594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 498
Target Start/End: Complemental strand, 36139958 - 36139848
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa-caattt 487  Q
    ||||| ||||||||||||||| ||| ||||||| | ||||||  |||||| ||  |||||||| ||   ||||||||||||| ||||| |||| || |||    
T  36139958 aaacagcttatgacatgttcacaagctgttttcagcttattttcataagctcttcaagatagtataatgaaacaacttatagcttatacgaaatcagttt 36139859  T
Q  488 aactttatttt 498  Q
     ||||||||||    
T  36139858 gactttatttt 36139848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 431
Target Start/End: Complemental strand, 36200176 - 36200134
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttc 431  Q
    |||||||||||||||||| |||||||||||||| | |||||||    
T  36200176 aaacaacttatgacatgtccataagttgttttcagcttatttc 36200134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 50004733 - 50004683
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagc 438  Q
    ||||||||||||||||||||| |||| ||||||| | ||||||| ||||||    
T  50004733 gaaacaacttatgacatgttcttaagctgttttcagcttatttcaataagc 50004683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 421
Target Start/End: Original strand, 3044248 - 3044281
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttc 421  Q
    |||||||||||||||||||||||||| |||||||    
T  3044248 gaaacaacttatgacatgttcataagctgttttc 3044281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 499
Target Start/End: Original strand, 10540540 - 10540593
Alignment:
Q  447 atagtttatgaaaacaacttatagtttatatgaaa-caatttaactttattttt 499  Q
    |||| |||||||||||||||||||||||||| |||  ||||| |||||||||||    
T  10540540 atagcttatgaaaacaacttatagtttatataaaattaatttgactttattttt 10540593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 421
Target Start/End: Complemental strand, 27294475 - 27294394
Alignment:
Q  340 tttatctattgacataaatacttctgagattgttcaaaagatctcatagaaacaacttatgacatgttcataagttgttttc 421  Q
    ||||||||||| |||||  |||| ||||| ||||  | ||| ||||||||||||||| |||| ||| ||||||| |||||||    
T  27294475 tttatctattgtcataagcacttgtgagactgtttgagagagctcatagaaacaactcatgatatgctcataagctgttttc 27294394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 430
Target Start/End: Original strand, 47249476 - 47249517
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttattt 430  Q
    |||| ||||||||||||||||||||||||||| || ||||||    
T  47249476 aaaccacttatgacatgttcataagttgtttttggcttattt 47249517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 476
Target Start/End: Original strand, 47319275 - 47319348
Alignment:
Q  403 atgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttata 476  Q
    ||||| |||||||| ||||   ||||||  |||||| ||||||||||| |||||| |||| |||||||||||||    
T  47319275 atgttaataagttgatttctacttattttcataagctctctaagatagattatgacaacagcttatagtttata 47319348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 450
Target Start/End: Complemental strand, 47513733 - 47513672
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatag 450  Q
    |||||| |||||||| |||||||||||||||||  |||||||  |||||| ||| |||||||    
T  47513733 aaacaagttatgacacgttcataagttgttttcaatttattttcataagctctccaagatag 47513672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 469
Target Start/End: Complemental strand, 1816659 - 1816583
Alignment:
Q  393 aacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    |||||||||||| |||||| | ||||||| | ||||||  |||||| ||| |  |||| ||||||||||||||||||    
T  1816659 aacttatgacattttcataggctgttttcagcttattttgataagctctccagtatagcttatgaaaacaacttata 1816583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 421
Target Start/End: Complemental strand, 21754797 - 21754765
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttc 421  Q
    |||||||||||||||||||||| ||||||||||    
T  21754797 aaacaacttatgacatgttcatcagttgttttc 21754765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 481
Target Start/End: Original strand, 21862177 - 21862257
Alignment:
Q  401 acatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    |||||| |||||||||||||| | ||||||| |||||| |||  |||||| | |||| ||| ||| |||| ||||||||||    
T  21862177 acatgtccataagttgttttcagcttatttccataagctctcccagatagctaatgagaactactcatagcttatatgaaa 21862257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 470
Target Start/End: Original strand, 28622006 - 28622070
Alignment:
Q  406 ttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatag 470  Q
    |||||||| ||||||| | ||||||  |||||  ||| ||||||||||||||||||| |||||||    
T  28622006 ttcataagctgttttcaggttattttcataagttctcgaagatagtttatgaaaacagcttatag 28622070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 31710877 - 31710957
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    |||||||||||||||||  ||| || ||||||| | ||| ||| | |||| ||||||||||| ||| ||||||| ||||||    
T  31710877 aaacaacttatgacatgcccatgagctgttttcagcttaattccaaaagctctctaagataggttaagaaaacagcttata 31710957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 31711132 - 31711212
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    |||||||||||||||||  ||| || ||||||| | ||| ||| | |||| ||||||||||| ||| ||||||| ||||||    
T  31711132 aaacaacttatgacatgcccatgagctgttttcagcttaattccaaaagctctctaagataggttaagaaaacagcttata 31711212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 397 - 473
Target Start/End: Original strand, 34924536 - 34924612
Alignment:
Q  397 tatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagttt 473  Q
    ||||||| || |||| ||||||||| | ||||||  |||||| ||||||||||| ||||||||| | || |||||||    
T  34924536 tatgacaagtccatatgttgttttcagcttattttcataagctctctaagatagcttatgaaaatagctcatagttt 34924612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 498
Target Start/End: Original strand, 36783382 - 36783434
Alignment:
Q  447 atagtttatgaaaacaacttatagtttatatg-aaacaatttaactttatttt 498  Q
    |||| ||||||||||| || |||||||||||| ||||||||| ||||||||||    
T  36783382 atagcttatgaaaacagctaatagtttatatgaaaacaattttactttatttt 36783434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 469
Target Start/End: Complemental strand, 36887580 - 36887504
Alignment:
Q  393 aacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    ||||| ||||||||||||||| ||||||| | ||||||  |||||  ||  ||||| | ||||||||||||||||||    
T  36887580 aacttttgacatgttcataagatgttttcagcttattttcataagttcttcaagatggcttatgaaaacaacttata 36887504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 41644435 - 41644515
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    |||||||||  ||||| |||||||| ||||||| | |||||||  ||||  ||||| ||||| ||||||||||| ||||||    
T  41644435 aaacaacttgggacattttcataagctgttttcagcttatttccttaagatctctacgatagcttatgaaaacagcttata 41644515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 455
Target Start/End: Original strand, 49586924 - 49586992
Alignment:
Q  387 agaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttat 455  Q
    |||||||  ||||||||| | |||||||||||||| |||||||||| ||| | ||| ||||||| ||||    
T  49586924 agaaacagtttatgacatatccataagttgttttcagtttatttctttaatctctccaagatagcttat 49586992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 477
Target Start/End: Original strand, 51510219 - 51510271
Alignment:
Q  425 ttatttctataagcactctaagatagtttatgaaaacaacttatagtttatat 477  Q
    ||||||| |||||| ||| | ||||  ||||||||||||||||||||||||||    
T  51510219 ttatttccataagctctccacgataacttatgaaaacaacttatagtttatat 51510271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 469
Target Start/End: Original strand, 52412890 - 52412974
Alignment:
Q  385 atagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    ||||||||||| ||||||||||| ||||| ||||||| | ||||||| ||| || ||||| || |  ||||||||| | ||||||    
T  52412890 atagaaacaacctatgacatgtttataagctgttttcagcttatttccatatgctctctaggacaacttatgaaaatagcttata 52412974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 470
Target Start/End: Original strand, 53891880 - 53891964
Alignment:
Q  386 tagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatag 470  Q
    |||||||| ||||  |||||  |||||||||||||  ||||||||| |  ||||||||| ||||| |||||||| || |||||||    
T  53891880 tagaaacagcttaacacatgcccataagttgttttaagtttatttccaacagcactctaggatagcttatgaaatcagcttatag 53891964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 6e-23; HSPs: 83)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 396 - 498
Target Start/End: Complemental strand, 30257756 - 30257653
Alignment:
Q  396 ttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatat-gaaacaatttaacttta 494  Q
    |||||||||||||||||| ||||||| | |||||||||||||| ||| | |||||||||||||||||||||| || |||||| |||||| ||| ||||||    
T  30257756 ttatgacatgttcataagctgttttcagcttatttctataagccctccaggatagtttatgaaaacaacttaaagcttatatggaaacagtttgacttta 30257657  T
Q  495 tttt 498  Q
    ||||    
T  30257656 tttt 30257653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 389 - 498
Target Start/End: Original strand, 31517730 - 31517840
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa-caattt 487  Q
    |||||||| |||||||||||||||| ||||||| | ||||||  |||||| ||| |||| || ||||||| ||| ||||||| |||||||||| ||||||    
T  31517730 aaacaactcatgacatgttcataagctgttttcagcttattttcataagctctccaagacagattatgaagacagcttatagcttatatgaaatcaattt 31517829  T
Q  488 aactttatttt 498  Q
    |||||||||||    
T  31517830 aactttatttt 31517840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 396 - 498
Target Start/End: Complemental strand, 25479654 - 25479551
Alignment:
Q  396 ttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaa-acaatttaacttta 494  Q
    ||||||||||||||| |||||||||| | ||||||  |||||| ||||| ||||| |||||||||||||||||||  |||||||| ||||||| || |||    
T  25479654 ttatgacatgttcattagttgttttcagcttattttcataagctctctaggatagcttatgaaaacaacttatagcctatatgaagacaatttgacgtta 25479555  T
Q  495 tttt 498  Q
    ||||    
T  25479554 tttt 25479551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 387 - 498
Target Start/End: Complemental strand, 30371230 - 30371118
Alignment:
Q  387 agaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaat 485  Q
    |||||||||| ||||||||| |||||||||||||| | ||||||| ||| || ||| || ||   ||||||||||||||||||| ||||||| |||||||    
T  30371230 agaaacaactaatgacatgtccataagttgttttcagcttatttcaatacgctctccaaaatgtcttatgaaaacaacttatagcttatatgaaaacaat 30371131  T
Q  486 ttaactttatttt 498  Q
    || | ||||||||    
T  30371130 ttgagtttatttt 30371118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 402 - 481
Target Start/End: Original strand, 23902070 - 23902149
Alignment:
Q  402 catgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||| |||||||||||||| | ||| ||| |||||| ||||||||||| || |||||||||||||||| ||||||||||    
T  23902070 catgtgcataagttgttttcagcttacttccataagctctctaagatagcttttgaaaacaacttatagcttatatgaaa 23902149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 389 - 465
Target Start/End: Original strand, 4699605 - 4699681
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaact 465  Q
    ||||||||||||||||||||||||| ||||||  | |||||||||||||| |||   ||||||||||||||| ||||    
T  4699605 aaacaacttatgacatgttcataagctgtttttagcttatttctataagctctccgggatagtttatgaaaataact 4699681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 388 - 481
Target Start/End: Original strand, 28689441 - 28689536
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatag--tttatgaaaacaacttatagtttatatgaaa 481  Q
    |||||| |||||||||||| |||||||||||||| | ||||||  ||||||  || |||||||  | |||||||||||||||||| ||||||||||    
T  28689441 gaaacagcttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttatatgaaaacaacttatagcttatatgaaa 28689536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 481
Target Start/End: Original strand, 12564877 - 12564956
Alignment:
Q  402 catgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||| |||||| ||||||| | |||||||  ||||||||  ||||||| ||||||||||||||||||| ||||||||||    
T  12564877 catgtccataagctgttttcagcttatttccgtaagcactaaaagatagcttatgaaaacaacttatagcttatatgaaa 12564956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 478
Target Start/End: Original strand, 27887114 - 27887197
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg 478  Q
    |||||||||||| ||||| |||||||  | |||||| |||| || ||| | ||||||||||||||||||||||||| |||||||    
T  27887114 cttatgacatgtccataaattgtttttagcttatttttatatgctctccatgatagtttatgaaaacaacttatagcttatatg 27887197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 389 - 498
Target Start/End: Original strand, 7218064 - 7218174
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaattt 487  Q
    |||| |||||||||| ||||| ||| |||||||   ||||||  |||||  ||| | ||||| ||||||||||||||||||| ||||||| |||||||||    
T  7218064 aaacgacttatgacacgttcacaagctgttttcaacttattttcataagttctccaggataggttatgaaaacaacttatagcttatatgaaaacaattt 7218163  T
Q  488 aactttatttt 498  Q
     ||||||||||    
T  7218164 gactttatttt 7218174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 395 - 481
Target Start/End: Original strand, 10199404 - 10199490
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||||||||||||||||||||||| | ||||||  |||||| |||||| |||| ||||||||| | ||||| | ||||| ||||    
T  10199404 cttatgacatgttcataagttgttttcagcttattttcataagctctctaaaatagcttatgaaaaaagcttatcgattatacgaaa 10199490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 341 - 498
Target Start/End: Complemental strand, 15581382 - 15581224
Alignment:
Q  341 ttatctattgacataaatacttctgagattgttcaaaagatctcatagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcac 440  Q
    ||||||| ||||||||  |||| ||||||||||   |||| || || |||||||||||||||||||  ||||| ||||||| |  ||||||||||||| |    
T  15581382 ttatctactgacataagcacttgtgagattgtttggaagagctaatggaaacaacttatgacatgtctataagctgttttcagcctatttctataagccc 15581283  T
Q  441 tctaagatagtttatgaaaacaacttatagtttatatgaaacaat-ttaactttatttt 498  Q
    ||||  |||  |||| |||| | ||||||| |||||| |||  || |||||||||||||    
T  15581282 tctagcataccttataaaaaaagcttatagcttatataaaaatatattaactttatttt 15581224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 465
Target Start/End: Original strand, 19412586 - 19412663
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaact 465  Q
    ||||||||||||||||||| |||||| || ||| || ||||||| ||||||  |||||||| ||||| ||||||||||    
T  19412586 gaaacaacttatgacatgtccataagctgattttggcttatttccataagctttctaagatggtttacgaaaacaact 19412663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 497
Target Start/End: Original strand, 37842345 - 37842454
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaa-acaattt 487  Q
    ||||| || ||||||||||||||||  |||||| | |||||| ||||||  ||  ||||||| ||||||||||||||||||| ||||  ||| ||| |||    
T  37842345 aaacatctaatgacatgttcataagcagttttcagcttatttttataagttcttcaagatagcttatgaaaacaacttatagcttattcgaacacagttt 37842444  T
Q  488 aactttattt 497  Q
    ||||||||||    
T  37842445 aactttattt 37842454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 391 - 456
Target Start/End: Original strand, 46252674 - 46252739
Alignment:
Q  391 acaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatg 456  Q
    ||||||||||||||||||||||||||||||| | ||||||  |||||| ||| ||||||| |||||    
T  46252674 acaacttatgacatgttcataagttgttttcaggttattttcataagctctccaagatagcttatg 46252739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 467
Target Start/End: Complemental strand, 3223749 - 3223670
Alignment:
Q  387 agaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaactta 467  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||| |||||| | ||| ||||  ||| ||||||||||||    
T  3223749 agaaacaacttatgacatgtttataagttgttttcagcttatttc-ataagctcgctaggataacttacgaaaacaactta 3223670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 498
Target Start/End: Complemental strand, 17269324 - 17269220
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaacttt 493  Q
    |||||||||||||||| |||||||||    ||||| |  ||||| ||| | ||||| ||||||||||||||||| | ||||||| ||||||||| |||||    
T  17269324 cttatgacatgttcatgagttgtttttaacttattaccgtaagctctccaggatagcttatgaaaacaacttattgcttatatgaaaacaatttgacttt 17269225  T
Q  494 atttt 498  Q
    |||||    
T  17269224 atttt 17269220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 477
Target Start/End: Complemental strand, 24676074 - 24675986
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatat 477  Q
    |||||||| ||||  |||||||||| | ||||||||||||||| | | || | ||||||||||||| ||||| ||||| ||||||||||    
T  24676074 aaacaactcatgatctgttcataagctattttcggtttatttcgacaggctccctaagatagtttacgaaaataacttttagtttatat 24675986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 494
Target Start/End: Complemental strand, 17628680 - 17628573
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatt 486  Q
    ||||||||||||||||||| |||||| ||||||| |  |||||| | |||  ||| || |||||| || |||||| |||||| |||||||| ||||||||    
T  17628680 gaaacaacttatgacatgtccataagctgttttcagcatatttccaaaagacctccaaaatagttaataaaaacagcttataatttatatgaaaacaatt 17628581  T
Q  487 taacttta 494  Q
    | ||||||    
T  17628580 tgacttta 17628573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 498
Target Start/End: Original strand, 25006079 - 25006134
Alignment:
Q  444 aagatagtttatgaaaacaacttatagtttatatg-aaacaatttaactttatttt 498  Q
    ||||||| ||||||||||||||||||| ||||||| ||||||||| ||||||||||    
T  25006079 aagatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttatttt 25006134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 403 - 462
Target Start/End: Original strand, 28077073 - 28077132
Alignment:
Q  403 atgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaaca 462  Q
    ||||||||||||||||||| | ||||||| |||||| |||||| |||| |||||||||||    
T  28077073 atgttcataagttgttttcagcttatttcaataagctctctaaaatagcttatgaaaaca 28077132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 403 - 470
Target Start/End: Complemental strand, 35351105 - 35351038
Alignment:
Q  403 atgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatag 470  Q
    ||||| ||||||||||||| | |||||| | ||||| ||||| ||||||||||||| |||||||||||    
T  35351105 atgtttataagttgttttcagcttatttttgtaagctctctaggatagtttatgaagacaacttatag 35351038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 481
Target Start/End: Complemental strand, 6659580 - 6659502
Alignment:
Q  403 atgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    |||| |||||||||||||| | ||||||| |||||| ||||  | ||| ||||||||||| ||||||| ||||||||||    
T  6659580 atgtccataagttgttttcagcttatttcgataagctctcttggttagcttatgaaaacatcttatagcttatatgaaa 6659502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 479
Target Start/End: Original strand, 39347953 - 39348047
Alignment:
Q  385 atagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatga 479  Q
    ||||||||| |  ||| ||||| |||||||||||||| | ||||||| ||||||  |  | ||||||||||||||||||||||||| || |||||    
T  39347953 atagaaacagccaatggcatgtccataagttgttttcagcttatttccataagctttgcaggatagtttatgaaaacaacttatagcttgtatga 39348047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 498
Target Start/End: Complemental strand, 49888819 - 49888737
Alignment:
Q  417 ttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaactttatttt 498  Q
    ||||||| ||||||  |||||  ||||||||||| |||||||||||||| |||| ||||| | |||||||| |||||||||||    
T  49888819 ttttcggcttattttcataagttctctaagatagcttatgaaaacaactaatagcttatacgaaaacaattaaactttatttt 49888737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 2234819 - 2234731
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatat 477  Q
    |||||||||||||||||||||||||||||||||  |  || ||| |||||| || ||  |||| ||| |||||||||||| |||||||||    
T  2234819 gaaacaacttatgacatgttcataagttgtttttagacta-ttccataagctctttagtatagcttacgaaaacaacttaaagtttatat 2234731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 476
Target Start/End: Original strand, 7136994 - 7137075
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttata 476  Q
    |||||||||| |||||||||| ||||| | ||||||  |||||  ||| ||||||| ||||||||||| ||||||| |||||    
T  7136994 cttatgacatattcataagttattttcagcttattttcataagttctccaagatagcttatgaaaacagcttatagattata 7137075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 389 - 470
Target Start/End: Complemental strand, 10744381 - 10744300
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatag 470  Q
    ||||| |||||| |||||||||||| |||||||   |||||| ||||||  |||||||| || ||||||||||| |||||||    
T  10744381 aaacagcttatggcatgttcataagctgttttcatcttatttttataagttctctaagacagcttatgaaaacagcttatag 10744300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 469
Target Start/End: Complemental strand, 27140559 - 27140478
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    |||||| |||||||||||| |||||||||||||| | ||||||  |||||| ||| | ||||| |||| |||||| ||||||    
T  27140559 gaaacagcttatgacatgtccataagttgttttcagcttatttgcataagctctccatgatagcttataaaaacagcttata 27140478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 390 - 467
Target Start/End: Original strand, 27963361 - 27963438
Alignment:
Q  390 aacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaactta 467  Q
    |||| |||||||||||| |||||||||||||  | |||||| ||||||| ||| |  |||| ||||||||||||||||    
T  27963361 aacagcttatgacatgtccataagttgtttttagcttatttatataagctctccataatagcttatgaaaacaactta 27963438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 332 - 481
Target Start/End: Original strand, 28482166 - 28482315
Alignment:
Q  332 tatttaaatttatctattgacataaatacttctgagattgttcaaaagatctcatagaaacaacttatgacatgttcataagttgttttcggtttatttc 431  Q
    ||||| || ||||||| |||||||   |||| ||||||||||| | ||| |||||||||||| ||||||| || |||||||  | ||||  | ||||||     
T  28482166 tatttgaacttatctactgacatacgaacttgtgagattgttcgatagagctcatagaaacatcttatgatatattcataaactatttttagcttatttt 28482265  T
Q  432 tataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
      ||||| ||| ||||||  |||| |||||| ||||||| ||||||||||    
T  28482266 cgtaagctctccaagataacttataaaaacagcttatagcttatatgaaa 28482315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 481
Target Start/End: Original strand, 29007705 - 29007798
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||| |||||| ||||||||||||||||||| | ||||||| ||||||  |  ||  |||   ||||||||||||||||| ||||||||||    
T  29007705 gaaacaatttatgatatgttcataagttgttttcagcttatttcgataagcttttcaaagtagccgatgaaaacaacttatagcttatatgaaa 29007798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 476
Target Start/End: Complemental strand, 34290310 - 34290229
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttata 476  Q
    |||||||||| |||||||||||||||| | ||||||  |||||  ||  ||||||| ||||||||||| ||||||| |||||    
T  34290310 cttatgacatattcataagttgttttcagcttattttcataagttcttcaagatagcttatgaaaacagcttatagcttata 34290229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 389 - 481
Target Start/End: Original strand, 37241811 - 37241904
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcg-gtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||||||||| || |||||||||| |||||  | ||||||  |||||| ||||| ||||  ||||||||||||||| ||| ||||||||||    
T  37241811 aaacaacttatgatatattcataagtttttttccagcttattttcataagctctctaggatatcttatgaaaacaacttctagcttatatgaaa 37241904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 481
Target Start/End: Complemental strand, 3924704 - 3924612
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    |||||| |||||| ||||| ||||||||||||||| ||||||| |||| | ||  | ||||| |||| ||||||||| |||| ||||| ||||    
T  3924704 aaacaatttatgaaatgtttataagttgttttcggcttatttccataaactcttcaggatagcttataaaaacaactaatagattatacgaaa 3924612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 6292573 - 6292493
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    ||||| ||||||||||||||||||| ||||||| | ||||||  |||||| ||| || |||||||| ||||| | ||||||    
T  6292573 aaacagcttatgacatgttcataagctgttttcagcttattttcataagctctccaaaatagtttacgaaaatagcttata 6292493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 477
Target Start/End: Original strand, 14629964 - 14630044
Alignment:
Q  397 tatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatat 477  Q
    ||||| ||||||||||||||||||| | ||||||| ||||   ||| ||||||| ||||||||| | ||||||| ||||||    
T  14629964 tatgatatgttcataagttgttttcagcttatttccataaagtctccaagatagcttatgaaaatagcttatagcttatat 14630044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 469
Target Start/End: Complemental strand, 15558285 - 15558217
Alignment:
Q  401 acatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    ||||| ||||||||||||||| | |||||||||||||  ||||| ||||  ||||||||||| ||||||    
T  15558285 acatgctcataagttgttttcagcttatttctataagttctctaggatatcttatgaaaacagcttata 15558217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 479
Target Start/End: Original strand, 24460403 - 24460487
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatga 479  Q
    ||||||||||||||||||| ||||| | | |||||| | ||||| ||| | ||||| ||||||||||||  |||||| |||||||    
T  24460403 cttatgacatgttcataagctgtttccagcttatttttgtaagctctcaaggatagcttatgaaaacaaactatagtctatatga 24460487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 498
Target Start/End: Original strand, 30259463 - 30259587
Alignment:
Q  376 aaagatctcatagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatag-tttatgaaaacaacttatagttta 474  Q
    ||||| || |||||||||||||| |||||||  |||| ||||||||   ||||||| |||||| ||| | ||||| |||||| ||||| ||||||| |||    
T  30259463 aaagagcttatagaaacaacttacgacatgtcaataaattgttttcaacttatttccataagctctccatgatagctttatgcaaacagcttatagctta 30259562  T
Q  475 tatgaaa-caatttaactttatttt 498  Q
    ||| ||| || ||| ||||||||||    
T  30259563 tatcaaagcagtttgactttatttt 30259587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 40394938 - 40394986
Alignment:
Q  452 ttatgaaaacaacttatagtttatatg-aaacaatttaactttattttt 499  Q
    |||||||||||||||||| |||||||| ||||||||||||||| |||||    
T  40394938 ttatgaaaacaacttataatttatatgaaaacaatttaacttttttttt 40394986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 441
Target Start/End: Complemental strand, 42397808 - 42397752
Alignment:
Q  386 tagaaacaacttatgacatgttcataagttgttttc-ggtttatttctataagcact 441  Q
    ||||||||||||||| |||||||||||||||||||| | || ||||| |||||||||    
T  42397808 tagaaacaacttatggcatgttcataagttgttttcagcttaatttccataagcact 42397752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 482
Target Start/End: Original strand, 3319929 - 3320015
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaac 482  Q
    |||||||||||| |||| ||||||||| | |||| || |||||  ||||| ||||| ||| |  ||||||||||||||||||||||||    
T  3319929 cttatgacatgtccata-gttgttttcagcttatatccataagatctctatgatagcttacgttaacaacttatagtttatatgaaac 3320015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 481
Target Start/End: Original strand, 6231799 - 6231898
Alignment:
Q  382 ctcatagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||| ||||||||| ||||||||| |||||  ||||||| | |||||||||||||  ||  | | ||| ||| ||||||| ||||||| ||||||||||    
T  6231799 ctcatggaaacaactaatgacatgtccataaactgttttcagcttatttctataagttcttcaggttagcttacgaaaacagcttatagattatatgaaa 6231898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 469
Target Start/End: Complemental strand, 11129304 - 11129245
Alignment:
Q  410 taagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    |||| ||||||||||||||||| |||||| ||| || |||||||| ||||||||| ||||    
T  11129304 taagctgttttcggtttatttccataagctctccaaaatagtttacgaaaacaacctata 11129245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 482
Target Start/End: Original strand, 12564495 - 12564582
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaac 482  Q
    ||||||||| ||  ||||||||||||| | ||||||| |||||  ||| ||||||| ||||||||||||| ||||  || ||||||||    
T  12564495 cttatgacaagtcaataagttgttttcagcttatttccataagttctccaagatagcttatgaaaacaacctataccttgtatgaaac 12564582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 497
Target Start/End: Complemental strand, 34405231 - 34405128
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttata-tgaaacaatttaacttt 493  Q
    ||||| ||||||||||||||| ||||| | || |||  || |||||||| ||||| ||||||||||   ||||||| |||||   |||||||||||||||    
T  34405231 cttataacatgttcataagttattttcagctttttttcatcagcactctgagataatttatgaaaattgcttatagattatacaaaaacaatttaacttt 34405132  T
Q  494 attt 497  Q
    ||||    
T  34405131 attt 34405128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 481
Target Start/End: Complemental strand, 35925770 - 35925674
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatg----aaaacaacttatagtttatatgaaa 481  Q
    ||||| ||||||||||||||||||| |||||||   ||||||| |||| | ||| | ||||| |||||     ||||||||||||||||||||||||    
T  35925770 aaacagcttatgacatgttcataagctgttttcaacttatttccataaactctccatgatagcttatggaaacaaacaacttatagtttatatgaaa 35925674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 441 - 495
Target Start/End: Original strand, 37295760 - 37295815
Alignment:
Q  441 tctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaactttat 495  Q
    |||||||||| ||||||||||||||||||| ||| | | |||||||||||||||||    
T  37295760 tctaagataggttatgaaaacaacttatagcttaaacgaaaacaatttaactttat 37295815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 476
Target Start/End: Original strand, 38247043 - 38247130
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttata 476  Q
    |||| |||||| ||| |||||||||||||||||   ||| || ||||||| ||| | ||||| | |||||| ||||||||||||||||    
T  38247043 aaaccacttattacacgttcataagttgttttcaacttacttttataagctctccacgatagatcatgaaagcaacttatagtttata 38247130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 43532593 - 43532628
Alignment:
Q  385 atagaaacaacttatgacatgttcataagttgtttt 420  Q
    |||||||||||||||||||||||||| |||||||||    
T  43532593 atagaaacaacttatgacatgttcatgagttgtttt 43532628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 498
Target Start/End: Complemental strand, 45205153 - 45205038
Alignment:
Q  384 catagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatat-gaaac 482  Q
    |||| ||||||||||||| |||| | |||||||||||| | ||||||| || | | ||  | ||||| ||||||||||||||| ||| |||||| ||||     
T  45205153 cataaaaacaacttatgatatgtccctaagttgttttcagcttatttccatgaactctacatgatagcttatgaaaacaacttctagcttatatggaaat 45205054  T
Q  483 aatttaactttatttt 498  Q
    | ||| ||||||||||    
T  45205053 agtttgactttatttt 45205038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 484
Target Start/End: Complemental strand, 6981631 - 6981477
Alignment:
Q  330 cctatttaaatttatctattgacataaatacttctgagattgttcaaaagatctcatagaaacaacttatgacatgttcataagttgttttcggtttatt 429  Q
    ||||||| |||||||||| || |||||  |||| || || |||| |||||| || ||||| |||| ||||| |||||  ||||||||||||| |  ||||    
T  6981631 cctatttgaatttatctagtggcataagcacttgtgtgaatgtttaaaagagcttatagatacaatttatgtcatgtcaataagttgttttcagcatatt 6981532  T
Q  430 tctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaacaa 484  Q
    || |||| | ||| |  |||| ||| |||| || |||||| ||||||| ||||||    
T  6981531 tccataaactctccagaatagcttaggaaatcagcttataatttatatcaaacaa 6981477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 468
Target Start/End: Original strand, 12593449 - 12593522
Alignment:
Q  395 cttatgacatgttcataagttgttttc-ggtttatttctataagcactctaagatagtttatgaaaacaacttat 468  Q
    ||||| |||||| |||||||||||||| |||||| ||| |||||| ||| ||||||| ||||||||||| |||||    
T  12593449 cttataacatgtgcataagttgttttcaggttta-ttccataagcgctccaagatagcttatgaaaacagcttat 12593522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 466
Target Start/End: Complemental strand, 15438044 - 15437966
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaactt 466  Q
    ||||||||||||||||||||||||||||  |||| | |||||||  ||| | ||| | |||||  ||||||||||||||    
T  15438044 gaaacaacttatgacatgttcataagttactttcagcttatttccgtaaactctcgaggatagcctatgaaaacaactt 15437966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 462
Target Start/End: Original strand, 15942737 - 15942811
Alignment:
Q  389 aaacaacttatgacatgttcataag-ttgttttcggtttatttctataagcactctaagatagtttatgaaaaca 462  Q
    |||||||||||||||||||||||||  ||||||| | ||||||| |||||  ||| ||||||  |||||||||||    
T  15942737 aaacaacttatgacatgttcataagcatgttttcagcttatttcaataagttctccaagataaattatgaaaaca 15942811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 458
Target Start/End: Complemental strand, 26184829 - 26184759
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaa 458  Q
    |||||| |||||||||||| |||||| ||||||| | ||||||| |||||| ||| | |||| ||||||||    
T  26184829 gaaacagcttatgacatgtccataagctgttttcagattatttccataagctctccaggataatttatgaa 26184759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 435
Target Start/End: Original strand, 34278687 - 34278729
Alignment:
Q  393 aacttatgacatgttcataagttgttttcggtttatttctata 435  Q
    ||||||||||||||||||| ||||||||| | |||||||||||    
T  34278687 aacttatgacatgttcataggttgttttcagcttatttctata 34278729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 477
Target Start/End: Original strand, 42556639 - 42556709
Alignment:
Q  407 tcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatat 477  Q
    ||||||||| ||||| |||||||  ||||| | ||| | ||||| ||||||||||||||||||| ||||||    
T  42556639 tcataagttattttcagtttattgatataaactctccatgatagcttatgaaaacaacttatagcttatat 42556709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 4549311 - 4549222
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatat 477  Q
    ||||||| |||||||||||  ||||||||||||| | ||||||| ||||||  ||   |||||||| ||||| || ||||||| ||||||    
T  4549311 gaaacaatttatgacatgtctataagttgttttcagcttatttccataagctatcctggatagtttgtgaaagcagcttatagcttatat 4549222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 498
Target Start/End: Original strand, 5421955 - 5422020
Alignment:
Q  434 taagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaactttatttt 498  Q
    ||||| ||||||||||| |||| |||||||||||||| ||||| | ||||||||| ||| ||||||    
T  5421955 taagctctctaagatagcttatcaaaacaacttatagcttataagaaaacaatttgactatatttt 5422020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 473
Target Start/End: Original strand, 16981933 - 16982010
Alignment:
Q  396 ttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagttt 473  Q
    ||||||||||| |||||||||||||  | |||||| ||||||| ||| | ||||| |||||| |||| |||| |||||    
T  16981933 ttatgacatgtccataagttgtttttagcttatttatataagctctccatgatagcttatgataacatcttaaagttt 16982010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 481
Target Start/End: Original strand, 25005830 - 25005879
Alignment:
Q  432 tataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||| ||| | ||||| ||||||||||||||||||| ||||||||||    
T  25005830 tataagctctccaggatagcttatgaaaacaacttatagcttatatgaaa 25005879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 421
Target Start/End: Complemental strand, 26185592 - 26185559
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttc 421  Q
    ||||||||||||||||||| ||||||||||||||    
T  26185592 gaaacaacttatgacatgtgcataagttgttttc 26185559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 481
Target Start/End: Complemental strand, 30285972 - 30285879
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    |||||| || ||| |||| | ||||||||||||| | |||||||||| ||   || ||||||||||||||||||||  || | |||||||||||    
T  30285972 gaaacatctcatggcatgctaataagttgttttctgcttatttctattagatatccaagatagtttatgaaaacaaagtaaaatttatatgaaa 30285879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 37941971 - 37942016
Alignment:
Q  385 atagaaacaacttatgacatgttcataagttgttttcggtttattt 430  Q
    |||||||||| ||||||||||| ||||||||||| |||| ||||||    
T  37941971 atagaaacaatttatgacatgtccataagttgttctcggcttattt 37942016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 421
Target Start/End: Original strand, 3070080 - 3070112
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttc 421  Q
    ||||||||||||||||||||||||| |||||||    
T  3070080 aaacaacttatgacatgttcataagctgttttc 3070112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 377 - 481
Target Start/End: Complemental strand, 4622185 - 4622081
Alignment:
Q  377 aagatctcatagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttata 476  Q
    ||||||| || | |||| |||||||||||| |||||| ||||||  | ||||||  | |||| ||| |||||||  |||| ||||| ||||||| |||||    
T  4622185 aagatctaatgggaacatcttatgacatgtccataagctgtttttagcttattttcacaagctctccaagatagcatatggaaacagcttatagcttata 4622086  T
Q  477 tgaaa 481  Q
    |||||    
T  4622085 tgaaa 4622081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 421
Target Start/End: Complemental strand, 5276369 - 5276341
Alignment:
Q  393 aacttatgacatgttcataagttgttttc 421  Q
    |||||||||||||||||||||||||||||    
T  5276369 aacttatgacatgttcataagttgttttc 5276341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 498
Target Start/End: Original strand, 5592694 - 5592785
Alignment:
Q  408 cataagttgttttcggtttatttctataagcactctaaga-tagtttatgaaaacaacttatagtttatatga-aacaatttaactttatttt 498  Q
    |||||||||||| | | ||||||  |||||| || ||||| ||| ||||||||||||||||||| |||||||| |||||||  ||||||||||    
T  5592694 cataagttgtttccagcttattttcataagctct-taagactagcttatgaaaacaacttatagcttatatgacaacaattcgactttatttt 5592785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 420
Target Start/End: Complemental strand, 6977005 - 6976973
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgtttt 420  Q
    |||||||||||||||||||||||||| ||||||    
T  6977005 gaaacaacttatgacatgttcataagctgtttt 6976973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 496
Target Start/End: Original strand, 7262508 - 7262616
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaattt 487  Q
    ||||| ||| ||||||||||||||| |||||||   ||||||| | |||| ||  | ||||| ||||||||| |||||||| || | ||| ||||| |||    
T  7262508 aaacagcttttgacatgttcataagctgttttcaccttatttccacaagctcttcaggatagcttatgaaaagaacttatacttaaaatgaaaacagttt 7262607  T
Q  488 aactttatt 496  Q
    |||||||||    
T  7262608 aactttatt 7262616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 481
Target Start/End: Complemental strand, 15515621 - 15515529
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||||||||||||||  ||| | | |||||  |||||||| ||||||  || | ||||  ||||||||||||||||||| ||||| ||||    
T  15515621 aaacaacttatgacatgtcaatacgctattttcaatttatttccataagctatccatgataacttatgaaaacaacttatagcttatacgaaa 15515529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 436
Target Start/End: Complemental strand, 15579563 - 15579515
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataa 436  Q
    ||||||||||||||||||| ||||||||||| || | ||||||| ||||    
T  15579563 gaaacaacttatgacatgtccataagttgttctcagcttatttccataa 15579515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 498
Target Start/End: Original strand, 27738228 - 27738280
Alignment:
Q  447 atagtttatgaaaacaacttatagtttatatg-aaacaatttaactttatttt 498  Q
    |||| |||||||||||| |||||| ||||||| ||||||||| ||||||||||    
T  27738228 atagcttatgaaaacaaattatagcttatatgaaaacaatttgactttatttt 27738280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 437
Target Start/End: Complemental strand, 31118123 - 31118075
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataag 437  Q
    ||||| |||||||||||||||| |||||||||| | ||||||| |||||    
T  31118123 aaacatcttatgacatgttcatcagttgttttcagcttatttccataag 31118075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 475
Target Start/End: Original strand, 31294513 - 31294597
Alignment:
Q  391 acaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttat 475  Q
    |||||||||||||  | |||||| | |||||   ||||||  |||||| ||||| |||||||||  |||||||||||||||||||    
T  31294513 acaacttatgacacatccataagctcttttcaacttattttcataagctctctatgatagtttacaaaaacaacttatagtttat 31294597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 495
Target Start/End: Original strand, 33723371 - 33723479
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatt 486  Q
    |||||| || ||||||||||||| || ||||||| | ||||||| ||||||  |  | | ||| |||||||||||  | |||||||||||| ||||||||    
T  33723371 gaaacagctcatgacatgttcatgagatgttttcagcttatttccataagctttacagggtagcttatgaaaacagttcatagtttatatgaaaacaatt 33723470  T
Q  487 taactttat 495  Q
    | |||||||    
T  33723471 tgactttat 33723479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 481
Target Start/End: Complemental strand, 33976730 - 33976674
Alignment:
Q  425 ttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||| |||||| ||||| ||||| ||| ||||||||||||||  ||||||||||    
T  33976730 ttatttccataagctctctaggataggttaagaaaacaacttataacttatatgaaa 33976674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 459
Target Start/End: Original strand, 37593676 - 37593744
Alignment:
Q  391 acaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaa 459  Q
    ||||||||||||||||||||||| ||||||| | ||||||  |||||| ||  || |||| ||||||||    
T  37593676 acaacttatgacatgttcataagctgttttcagcttattttcataagctcttcaaaatagcttatgaaa 37593744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 421
Target Start/End: Original strand, 38170680 - 38170712
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttc 421  Q
    ||||| |||||||||||||||||||||||||||    
T  38170680 aaacagcttatgacatgttcataagttgttttc 38170712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 481
Target Start/End: Original strand, 47413330 - 47413366
Alignment:
Q  445 agatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    |||||||||||||||||| |||| |||||||||||||    
T  47413330 agatagtttatgaaaacatcttacagtttatatgaaa 47413366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 421
Target Start/End: Complemental strand, 47917312 - 47917284
Alignment:
Q  393 aacttatgacatgttcataagttgttttc 421  Q
    |||||||||||||||||||||||||||||    
T  47917312 aacttatgacatgttcataagttgttttc 47917284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 5e-20; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 389 - 475
Target Start/End: Complemental strand, 1137792 - 1137706
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttat 475  Q
    ||||| ||||||||||||||||||||||||||| ||||||||| |||||| ||||  |||||||||||||| || ||||||| ||||    
T  1137792 aaacatcttatgacatgttcataagttgttttcagtttatttccataagctctcttggatagtttatgaaagcagcttatagattat 1137706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 408 - 498
Target Start/End: Complemental strand, 49219200 - 49219109
Alignment:
Q  408 cataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaactttatttt 498  Q
    |||||||||||||| | ||||||| |||| | || |||||||||||||||||||||||||||| ||||||| ||| ||||| ||||||||||    
T  49219200 cataagttgttttcagcttatttccataatctctttaagatagtttatgaaaacaacttatagcttatatgaaaataatttgactttatttt 49219109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 388 - 481
Target Start/End: Complemental strand, 24929574 - 24929481
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    |||||| |||||| ||||||||||| |||||||| | ||||||| |||||| |||||  | |||||||||||||||||||||| || |||||||    
T  24929574 gaaacagcttatggcatgttcataaattgttttcagcttatttccataagctctctagtagagtttatgaaaacaacttatagcttttatgaaa 24929481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 388 - 498
Target Start/End: Complemental strand, 29263451 - 29263340
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatt 486  Q
    |||||| ||||||| ||||||||||||||||||| | ||||||| | |||| ||  | ||||| ||||||||||||||||| | |||| || |||||||     
T  29263451 gaaacagcttatgatatgttcataagttgttttcagcttatttccacaagctctgcaggatagcttatgaaaacaacttatcgcttatttgaaaacaatg 29263352  T
Q  487 taactttatttt 498  Q
    ||||||||||||    
T  29263351 taactttatttt 29263340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 389 - 481
Target Start/End: Complemental strand, 23819169 - 23819077
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||| |||||||||||| ||||||||||||||   |||||||||||||| ||  ||||||| |||||||||||  |||||  ||||||||||    
T  23819169 aaacagcttatgacatgtccataagttgttttcatcttatttctataagctcttcaagatagcttatgaaaacatgttataacttatatgaaa 23819077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 451 - 498
Target Start/End: Original strand, 6927545 - 6927593
Alignment:
Q  451 tttatgaaaacaacttatagtttatatg-aaacaatttaactttatttt 498  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  6927545 tttatgaaaacaacttatagtttacatgaaaacaatttaactttatttt 6927593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 469
Target Start/End: Complemental strand, 11264385 - 11264301
Alignment:
Q  385 atagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    |||||| ||||||||||||||| |||||  |||||||   ||||||| |||||| ||||| ||| | ||||||||||||||||||    
T  11264385 atagaatcaacttatgacatgtccataaactgttttcaacttatttccataagctctctaggatggcttatgaaaacaacttata 11264301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 30207569 - 30207653
Alignment:
Q  397 tatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||||||   |||| ||||||| | ||||||| |||| | ||||||| ||| ||||||||||||||||||| ||||||||||    
T  30207569 tatgacatgtctgtaagctgttttcagcttatttccataatctctctaaggtagcttatgaaaacaacttatagcttatatgaaa 30207653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 332 - 498
Target Start/End: Complemental strand, 2996710 - 2996543
Alignment:
Q  332 tatttaaatttatctattgacataaatacttctgagattgttcaaaagatctcatagaaacaacttatgacatgttcataagttgttttcggtttatttc 431  Q
    ||||| || |||| |||||||||||  |||| ||||| ||||  | ||| || ||  |||||||||||||||||| |||||| | |||||   ||||||     
T  2996710 tatttgaacttatttattgacataagcacttttgagactgtttgagagagcttatgaaaacaacttatgacatgtccataagcttttttcaacttatttt 2996611  T
Q  432 tataagcactctaagatagtttatgaaaacaacttatagtttatat-gaaacaatttaactttatttt 498  Q
     ||| || ||| ||||||| ||||||||||||||||||  ||||||  ||||||||| ||| ||||||    
T  2996610 catacgctctccaagatagcttatgaaaacaacttataacttatataaaaacaatttgactgtatttt 2996543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 476
Target Start/End: Original strand, 7694009 - 7694087
Alignment:
Q  398 atgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttata 476  Q
    |||||||||||||||||||||||| | ||||||| |||| | ||| | ||||  ||||||||||| ||||||| |||||    
T  7694009 atgacatgttcataagttgttttcagcttatttccataaactctccaggataacttatgaaaacagcttatagcttata 7694087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 491
Target Start/End: Complemental strand, 8469028 - 8468926
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaacaattta 488  Q
    ||||| |||| | ||||| |||||||||||||| | ||||||  |||||| |||||  |||  |||||||||||||| |||| |||||||||| || |||    
T  8469028 aaacatcttacggcatgtccataagttgttttcagattattttcataagctctctagaataacttatgaaaacaactaatagcttatatgaaaaaaatta 8468929  T
Q  489 act 491  Q
    |||    
T  8468928 act 8468926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 407
Target Start/End: Complemental strand, 12817063 - 12816997
Alignment:
Q  341 ttatctattgacataaatacttctgagattgttcaaaagatctcatagaaacaacttatgacatgtt 407  Q
    |||| |||||| |||||||||| ||||||||||  ||||| || | |||||||||||||||||||||    
T  12817063 ttatatattgatataaatacttgtgagattgtttgaaagaacttagagaaacaacttatgacatgtt 12816997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 498
Target Start/End: Original strand, 20936219 - 20936329
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatat-gaaacaattt 487  Q
    ||||||||||||| ||||||||||| |||||||   ||||||| |||| | ||| | |||||  |||||||||||| ||||| ||||||  |||||||||    
T  20936219 aaacaacttatgatatgttcataagctgttttcaccttatttccataatctctccaggatagaatatgaaaacaacctatagattatataaaaacaattt 20936318  T
Q  488 aactttatttt 498  Q
     |||| |||||    
T  20936319 gacttcatttt 20936329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 389 - 462
Target Start/End: Complemental strand, 46110283 - 46110210
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaaca 462  Q
    ||||||||||||| ||  ||||||||||||||| | |||||||||||||| ||| |  |||| |||||||||||    
T  46110283 aaacaacttatgatatactcataagttgttttcagcttatttctataagctctcaatcatagcttatgaaaaca 46110210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 498
Target Start/End: Complemental strand, 17884134 - 17884038
Alignment:
Q  403 atgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttata-tgaaacaatttaactttatttt 498  Q
    ||||||||||||||||||| | | ||||  |||||| ||| || |||| |||||||||||||| |||  |||||   ||||||||||||||||||||    
T  17884134 atgttcataagttgttttcagctaattttcataagctctccaatatagcttatgaaaacaactgataacttatacaaaaacaatttaactttatttt 17884038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 437473 - 437532
Alignment:
Q  440 ctctaagatagtttatgaaaacaacttatagtttatatgaa-acaatttaactttatttt 498  Q
    |||||| |||| |||||||||||||||| |  ||||||||| ||||||||||||||||||    
T  437473 ctctaaaatagcttatgaaaacaacttaaaacttatatgaacacaatttaactttatttt 437532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 421
Target Start/End: Complemental strand, 2225662 - 2225623
Alignment:
Q  382 ctcatagaaacaacttatgacatgttcataagttgttttc 421  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  2225662 ctcatagaaacgacttatgacatcttcataagttgttttc 2225623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 476
Target Start/End: Original strand, 6466036 - 6466123
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttata 476  Q
    ||||||||||||| ||||||||||| | |||||   ||||||| |||| | |||||  |||| ||||| ||||||||||||| |||||    
T  6466036 aaacaacttatgagatgttcataagctattttcaacttatttccataatctctctagaatagcttatggaaacaacttatagattata 6466123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 498
Target Start/End: Original strand, 27043875 - 27043930
Alignment:
Q  444 aagatagtttatgaaaacaacttatagtttatatg-aaacaatttaactttatttt 498  Q
    |||||||||||| |||||| ||||||| ||||| | ||||||||||||||||||||    
T  27043875 aagatagtttataaaaacatcttatagcttatacgaaaacaatttaactttatttt 27043930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 476
Target Start/End: Complemental strand, 42121563 - 42121481
Alignment:
Q  393 aacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttata 476  Q
    ||||||||||||||||||||| || |||| | ||||||| | |||  ||| ||||||| | ||||||||||||||||| |||||    
T  42121563 aacttatgacatgttcataagctg-tttcagcttatttccacaagttctccaagatagctcatgaaaacaacttatagcttata 42121481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 498
Target Start/End: Complemental strand, 56480393 - 56480318
Alignment:
Q  424 tttatttctataagcactctaagatagtttatgaaaacaacttatagtttata-tgaaacaatttaactttatttt 498  Q
    |||||||  |||||| ||| ||||||||||||||||||| ||||||  |||||   ||||||||||||||||||||    
T  56480393 tttattttcataagctctccaagatagtttatgaaaacagcttataacttatacataaacaatttaactttatttt 56480318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 469
Target Start/End: Original strand, 11158373 - 11158427
Alignment:
Q  415 tgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    ||||||| | ||||||| | |||| ||||||||||| ||||||||||||||||||    
T  11158373 tgttttcagcttatttccacaagctctctaagatagcttatgaaaacaacttata 11158427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 481
Target Start/End: Complemental strand, 11842237 - 11842203
Alignment:
Q  447 atagtttatgaaaacaacttatagtttatatgaaa 481  Q
    |||||||||||||||||||||||| ||||||||||    
T  11842237 atagtttatgaaaacaacttatagcttatatgaaa 11842203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 470
Target Start/End: Original strand, 34398682 - 34398756
Alignment:
Q  396 ttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatag 470  Q
    ||||||||||  |||||||||||||||| ||| ||| |||||| ||| | ||| | ||||||||||| |||||||    
T  34398682 ttatgacatgcccataagttgttttcggcttacttccataagctctccatgatggcttatgaaaacagcttatag 34398756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 435
Target Start/End: Complemental strand, 46201424 - 46201382
Alignment:
Q  393 aacttatgacatgttcataagttgttttcggtttatttctata 435  Q
    ||||||||||||||||||| ||||||||| | |||||||||||    
T  46201424 aacttatgacatgttcataggttgttttcagcttatttctata 46201382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 462
Target Start/End: Original strand, 53673647 - 53673721
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaaca 462  Q
    |||||||| ||| | |||| |||||||||||||| | ||||||  |||||| ||| ||||||| |||||||||||    
T  53673647 gaaacaacatatcatatgtccataagttgttttcagcttatttacataagctctccaagatagcttatgaaaaca 53673721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 467
Target Start/End: Original strand, 55084483 - 55084549
Alignment:
Q  401 acatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaactta 467  Q
    ||||||||||||| || |||| | ||||||  |||||| ||||||||||| | ||||||||||||||    
T  55084483 acatgttcataagctggtttcagcttattttcataagctctctaagatagctcatgaaaacaactta 55084549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 24370940 - 24371024
Alignment:
Q  388 gaaacaacttatgacatgtt--cataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatag 470  Q
    |||||||||||||||||||   ||||||  |||||| | |||||||||||| |  | || ||||| |||||||||||||||||||    
T  24370940 gaaacaacttatgacatgtatacataagccgttttcagcttatttctataaactatttaggatagcttatgaaaacaacttatag 24371024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 480
Target Start/End: Complemental strand, 35406013 - 35405936
Alignment:
Q  403 atgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaa 480  Q
    ||||||||||| ||||||| | ||| ||| |||||| ||| | ||||  || |||||||||| |||||||||||||||    
T  35406013 atgttcataagctgttttcagcttacttccataagctctccaggataacttttgaaaacaacctatagtttatatgaa 35405936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 481
Target Start/End: Complemental strand, 2900384 - 2900328
Alignment:
Q  425 ttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    |||||| ||||| | ||||| ||||| || |||||||| ||||||||||||||||||    
T  2900384 ttatttttataatctctctatgatagcttgtgaaaacagcttatagtttatatgaaa 2900328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 465
Target Start/End: Complemental strand, 30632036 - 30631960
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaact 465  Q
    |||||||||||| |||||||||||| ||||||  | ||||||| | |||||||  | ||||| | ||||||||||||    
T  30632036 aaacaacttatggcatgttcataagctgttttaagcttatttccaaaagcacttcatgatagctcatgaaaacaact 30631960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 477
Target Start/End: Original strand, 33534159 - 33534247
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatat 477  Q
    |||||| || |||||| | |||||||||||||| | ||||||  |||||| ||| || ||| |||| ||||||||||| ||| ||||||    
T  33534159 aaacaaattgtgacatatccataagttgttttcagcttattttcataagctctcaaaaataatttacgaaaacaacttgtagattatat 33534247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 481
Target Start/End: Complemental strand, 36048577 - 36048521
Alignment:
Q  425 ttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||| |||||| ||||||||||| || |||||| | ||||||| ||||||||||    
T  36048577 ttatttccataagctctctaagatagcttttgaaaatagcttatagcttatatgaaa 36048521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 436
Target Start/End: Complemental strand, 36463171 - 36463131
Alignment:
Q  396 ttatgacatgttcataagttgttttcggtttatttctataa 436  Q
    |||||||||||| ||||| ||||||| ||||||||||||||    
T  36463171 ttatgacatgttgataagctgttttcagtttatttctataa 36463131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 453 - 481
Target Start/End: Complemental strand, 44019541 - 44019513
Alignment:
Q  453 tatgaaaacaacttatagtttatatgaaa 481  Q
    |||||||||||||||||||||||||||||    
T  44019541 tatgaaaacaacttatagtttatatgaaa 44019513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 46415782 - 46415862
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    ||||||| |||||||||| |||||||||||||| | | ||||   ||||| ||| | ||||| ||||||||| ||||||||    
T  46415782 aaacaacctatgacatgtccataagttgttttcagctaattttactaagctctcgaggatagcttatgaaaagaacttata 46415862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 385 - 462
Target Start/End: Complemental strand, 32821893 - 32821816
Alignment:
Q  385 atagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaaca 462  Q
    |||||||||||||||||||||| |||||| ||||||| |||||||||||||||| || || ||||| |||||||||||    
T  32821893 atagaaacaacttatgacatgtccataagctgttttcagtttatttctataagctctttaggatagcttatgaaaaca 32821816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 389 - 498
Target Start/End: Original strand, 29316765 - 29316875
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaattt 487  Q
    ||||| ||||||||||||||||||||| ||||| | ||||||| |||||  ||| ||||||| | ||||||||| ||||||| |||| || |||||||||    
T  29316765 aaacagcttatgacatgttcataagttcttttcagcttatttccataagttctccaagatagctgatgaaaacagcttatagattatgtgaaaacaattt 29316864  T
Q  488 aactttatttt 498  Q
    ||| |||||||    
T  29316865 aaccttatttt 29316875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 3235385 - 3235484
Alignment:
Q  400 gacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaacaatttaactttattttt 499  Q
    |||| ||||||||| ||||||| | ||||||| |||| |  |  |||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||    
T  3235385 gacaggttcataagctgttttcagcttatttccataaacttttcaagatagtatatgaaaacagcttatagtttatatgaaacagtttgactttattttt 3235484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 388 - 498
Target Start/End: Complemental strand, 14666629 - 14666518
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa-caatt 486  Q
    |||||||||||||||||||||||| |||||||||   ||||||  |||||||  | ||||||| || |||||||||||||||  |||||||||| || ||    
T  14666629 gaaacaacttatgacatgttcataggttgttttcaccttattttcataagcataccaagatagcttgtgaaaacaacttataacttatatgaaatcagtt 14666530  T
Q  487 taactttatttt 498  Q
    | ||||||||||    
T  14666529 tgactttatttt 14666518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 388 - 494
Target Start/End: Complemental strand, 43141952 - 43141845
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatat-gaaacaatt 486  Q
    ||||||||||||||||||  ||||||||||||||  |||||||| |||| | ||  | ||||| ||||||||||| ||||||| |||||| |||||||||    
T  43141952 gaaacaacttatgacatgcccataagttgttttcattttatttccataaactcttcaggatagcttatgaaaacatcttatagcttatatggaaacaatt 43141853  T
Q  487 taacttta 494  Q
    | ||||||    
T  43141852 tgacttta 43141845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 497
Target Start/End: Original strand, 30552632 - 30552742
Alignment:
Q  388 gaaacaacttatgacatgttcataagttg-ttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaacaatt 486  Q
    |||||||||||||||||||  |||||||| ||||  | ||||||| |||||| ||||| ||||||||||||||| || |||||| | |||||||| || |    
T  30552632 gaaacaacttatgacatgtcaataagttggtttttagcttatttccataagctctctaggatagtttatgaaaataatttatagctgatatgaaaaaagt 30552731  T
Q  487 taactttattt 497  Q
    |||||| ||||    
T  30552732 taacttaattt 30552742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 498
Target Start/End: Complemental strand, 37766873 - 37766768
Alignment:
Q  395 cttatgacatgttcataagttgttttcgg-tttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaactt 492  Q
    ||||||||||||||||| ||||||||||| ||||||||||  || | |||| ||||| | | ||||||||||||||||||||| | ||||| ||| ||||    
T  37766873 cttatgacatgttcatatgttgttttcggctttatttctactagtattctatgatagctcaggaaaacaacttatagtttatacgaaaacattttgactt 37766774  T
Q  493 tatttt 498  Q
    ||||||    
T  37766773 tatttt 37766768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 389 - 499
Target Start/End: Complemental strand, 9174896 - 9174784
Alignment:
Q  389 aaacaacttatgacat-gttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa-caatt 486  Q
    |||||||||||||||| ||||||||| | ||||| | ||||||  |||||| || |||||||| ||||||||||| ||||||||  |||||||| | |||    
T  9174896 aaacaacttatgacattgttcataagctattttcagcttattttcataagctctgtaagatagcttatgaaaacagcttatagtaaatatgaaagctatt 9174797  T
Q  487 taactttattttt 499  Q
    ||||| |||||||    
T  9174796 taactatattttt 9174784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 391 - 498
Target Start/End: Complemental strand, 33942228 - 33942120
Alignment:
Q  391 acaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaa 489  Q
    ||||||||||||||||||||||| ||||||| | | ||||  || ||| ||||| ||| | ||||||||||||||||||| ||| ||| ||||| ||| |    
T  33942228 acaacttatgacatgttcataagctgttttcagctaattttcattagctctctatgatggcttatgaaaacaacttatagcttacatgaaaacagtttga 33942129  T
Q  490 ctttatttt 498  Q
    |||||||||    
T  33942128 ctttatttt 33942120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 460
Target Start/End: Original strand, 34652022 - 34652097
Alignment:
Q  385 atagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaa 460  Q
    |||||||||||||||||||||| |||||| |||||||   ||||||| |||||| ||| ||||||| |||||||||    
T  34652022 atagaaacaacttatgacatgtccataagctgttttcaacttatttccataagctctccaagatagcttatgaaaa 34652097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 388 - 450
Target Start/End: Original strand, 41809234 - 41809296
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatag 450  Q
    |||||||||||||||||||||||||||||||||  | ||||||| ||||||  ||||||||||    
T  41809234 gaaacaacttatgacatgttcataagttgtttttagcttatttccataagctttctaagatag 41809296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 477
Target Start/End: Original strand, 39236496 - 39236573
Alignment:
Q  400 gacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatat 477  Q
    ||||| |||||||||||||||  | |||||| |||||||  | ||||||||||||| |||||||||||| ||||||||    
T  39236496 gacatattcataagttgtttttagcttatttttataagctttttaagatagtttattaaaacaacttattgtttatat 39236573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 466
Target Start/End: Original strand, 43065440 - 43065517
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaactt 466  Q
    |||||||||||||||||| ||||| |||||||| | ||||||| |||||| ||| | ||||  |||||||||||||||    
T  43065440 aaacaacttatgacatgtccataaattgttttcagcttatttcaataagctctccacgataacttatgaaaacaactt 43065517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 493
Target Start/End: Original strand, 43910993 - 43911094
Alignment:
Q  393 aacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttata-tgaaacaatttaact 491  Q
    ||||||||||||||||||||||||||||| | |||||   | ||||  || ||||||| || |||||||||||||| | |||||  ||||||||||||||    
T  43910993 aacttatgacatgttcataagttgttttcagcttattatcacaagctttccaagatagcttttgaaaacaacttatggcttatacggaaacaatttaact 43911092  T
Q  492 tt 493  Q
    ||    
T  43911093 tt 43911094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 481
Target Start/End: Original strand, 22681187 - 22681267
Alignment:
Q  401 acatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||||||||| ||||||  | ||||||| |||||  ||||| ||||| ||||||||||| ||||||| ||||||||||    
T  22681187 acatgttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaa 22681267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 389 - 460
Target Start/End: Complemental strand, 41817248 - 41817177
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaa 460  Q
    ||||| ||||||||||||| |||| |||||||| | ||||||| |||||| ||| | |||||||||||||||    
T  41817248 aaacatcttatgacatgttgataatttgttttcagcttatttccataagctctccaggatagtttatgaaaa 41817177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 9878671 - 9878753
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatag 470  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||  |||| |||   |||||   |||||||||||||||||    
T  9878671 gaaacaacttatgacatgtccataagttgttttcgacttatttcttcaagctctccgggatagcgaatgaaaacaacttatag 9878753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 470
Target Start/End: Complemental strand, 16867812 - 16867738
Alignment:
Q  396 ttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatag 470  Q
    ||||||||| ||||||||||||||||   ||||||| |||||| ||| ||||||| || |||||||| |||||||    
T  16867812 ttatgacatattcataagttgttttcaacttatttccataagctctccaagatagcttgtgaaaacaccttatag 16867738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 497
Target Start/End: Complemental strand, 18066153 - 18066099
Alignment:
Q  444 aagatagtttatgaaaacaacttatagtttatatg-aaacaatttaactttattt 497  Q
    ||||||| ||||||||||| ||||||| ||||||| |||||||||||||||||||    
T  18066153 aagatagcttatgaaaacagcttatagcttatatgaaaacaatttaactttattt 18066099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 10285936 - 10285847
Alignment:
Q  393 aacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaac 482  Q
    |||||||||||||| |||||| |||||||   ||||||| |||||  ||||| | ||| ||||| |||| |||||||| |||||||||||    
T  10285936 aacttatgacatgtccataagctgttttcaacttatttccataagttctctatgttagcttatgcaaacgacttatagcttatatgaaac 10285847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 498
Target Start/End: Complemental strand, 11513921 - 11513868
Alignment:
Q  446 gatagtttatgaaaacaacttatagtttatatg-aaacaatttaactttatttt 498  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||| ||||||||||    
T  11513921 gatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttatttt 11513868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 481
Target Start/End: Original strand, 14299620 - 14299713
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||||||||||||| | ||||  |||||||| | ||||||||||||||  || |||||||  | ||||||||||| |||  ||||||||||    
T  14299620 gaaacaacttatgacatatccatacattgttttcagcttatttctataagctgtcaaagatagcctgtgaaaacaactcataacttatatgaaa 14299713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 341 - 438
Target Start/End: Original strand, 16551782 - 16551879
Alignment:
Q  341 ttatctattgacataaatacttctgagattgttcaaaagatctcatagaaacaacttatgacatgttcataagttgttttcggtttatttctataagc 438  Q
    ||||||||||||||||| ||||  ||||||||| | |||| || || |||| | |||||||||| | |||||||||| ||| | ||||||| ||||||    
T  16551782 ttatctattgacataaacacttgcgagattgtttagaagagcttatggaaagatcttatgacatatacataagttgtattcagcttatttccataagc 16551879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 389 - 438
Target Start/End: Original strand, 28677649 - 28677698
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagc 438  Q
    ||||| |||||||||| |||||||||||||||||| ||||||| ||||||    
T  28677649 aaacagcttatgacattttcataagttgttttcggcttatttccataagc 28677698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 30538159 - 30538204
Alignment:
Q  385 atagaaacaacttatgacatgttcataagttgttttcggtttattt 430  Q
    |||||||||||||||||||||| |||||||||||||| | ||||||    
T  30538159 atagaaacaacttatgacatgtccataagttgttttcagcttattt 30538204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 389 - 462
Target Start/End: Original strand, 35379006 - 35379079
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaaca 462  Q
    ||||| || ||||| |||||||||||||||||| | ||||||  |||||| ||| ||||||| |||||||||||    
T  35379006 aaacagctgatgacttgttcataagttgttttcagcttattttcataagctctccaagatagcttatgaaaaca 35379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 498
Target Start/End: Complemental strand, 43199437 - 43199384
Alignment:
Q  446 gatagtttatgaaaacaacttatagtttatatgaa-acaatttaactttatttt 498  Q
    ||||||||||||||||||||||||| ||||| ||| | ||||||||||||||||    
T  43199437 gatagtttatgaaaacaacttatagcttatacgaagataatttaactttatttt 43199384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 497
Target Start/End: Complemental strand, 1625975 - 1625871
Alignment:
Q  395 cttatgaca-tgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaactt 492  Q
    ||||||||| |||||||||| ||||||| | | ||||   ||||  ||| ||||||| ||||||||||||||||||  ||||| | ||||||||||||||    
T  1625975 cttatgacaatgttcataagatgttttcagctgattttcgtaagttctccaagatagcttatgaaaacaacttataacttatacgaaaacaatttaactt 1625876  T
Q  493 tattt 497  Q
    |||||    
T  1625875 tattt 1625871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 498
Target Start/End: Complemental strand, 3673885 - 3673777
Alignment:
Q  392 caacttatgacatgttcataagttgttttcggtt-tatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa-caatttaa 489  Q
    ||||||||||||||| |||||||| |||  | || |||||||  |||| ||  ||||||| | ||||||| ||||||||  |||||||||| ||||||||    
T  3673885 caacttatgacatgtgcataagttttttgagcttatatttctgcaagctcttcaagatagctaatgaaaaaaacttataacttatatgaaaacaatttaa 3673786  T
Q  490 ctttatttt 498  Q
    |||||||||    
T  3673785 ctttatttt 3673777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 481
Target Start/End: Complemental strand, 15780121 - 15780065
Alignment:
Q  425 ttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    |||||||||||||| ||  | ||||| ||||||||||||||||||| ||||||||||    
T  15780121 ttatttctataagctctgcacgatagcttatgaaaacaacttatagattatatgaaa 15780065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 28933903 - 28933824
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    |||||||||||| |||||||||| | |||||||   |||||||||| ||| ||||| ||||| |||||||||||| |||||    
T  28933903 aaacaacttatggcatgttcata-gctgttttcaacttatttctatcagctctctaggatagcttatgaaaacaatttata 28933824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 460
Target Start/End: Complemental strand, 787412 - 787341
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaa 460  Q
    ||||| |||||||||||| |||||| ||||||| | |||| || |||| |  ||||||||||||||||||||    
T  787412 aaacagcttatgacatgtccataagctgttttcagcttatctccataaaccatctaagatagtttatgaaaa 787341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 477
Target Start/End: Complemental strand, 6227826 - 6227743
Alignment:
Q  394 acttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatat 477  Q
    ||||||||||||   ||||||||||||| | || || | |||||| ||| || |||| |||||||||| |||||||||||||||    
T  6227826 acttatgacatgagtataagttgttttcagcttgttaccataagctctccaaaatagcttatgaaaaccacttatagtttatat 6227743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 12147531 - 12147456
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatag 470  Q
    |||||||||||||||||| |||||||| ||||||||  ||||||  || |  ||||||||| ||||||| ||||||    
T  12147531 cttatgacatgttcataaattgttttcagtttattttcataagctatccagaatagtttataaaaacaaattatag 12147456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 444
Target Start/End: Original strand, 31739958 - 31740017
Alignment:
Q  385 atagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactcta 444  Q
    |||||||||||| |||||||| ||||||| ||||||| | ||||||| |||||| |||||    
T  31739958 atagaaacaactcatgacatgatcataagctgttttcagattatttccataagctctcta 31740017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 498
Target Start/End: Complemental strand, 35485994 - 35485887
Alignment:
Q  392 caacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttat-atgaaacaatttaac 490  Q
    |||||||||| ||||||||||| ||||||| | | ||||| ||| || ||  | ||||| |||| |||||||||||||| |||| |||||| | ||| ||    
T  35485994 caacttatgatatgttcataagctgttttcagctcatttccataggctcttcaggatagcttataaaaacaacttatagcttataatgaaatagtttgac 35485895  T
Q  491 tttatttt 498  Q
    ||||||||    
T  35485894 tttatttt 35485887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 481
Target Start/End: Complemental strand, 39983413 - 39983330
Alignment:
Q  398 atgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    |||||||||  ||||| | ||||| ||||||||  || ||| ||| | ||||| ||||||||||||||||||| ||||||||||    
T  39983413 atgacatgtctataagctattttcagtttattttcattagctctccaggatagcttatgaaaacaacttatagcttatatgaaa 39983330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 438
Target Start/End: Original strand, 1160660 - 1160710
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagc 438  Q
    |||||||| |||||||||| |||||||||||||  ||||||||| ||||||    
T  1160660 gaaacaacctatgacatgtccataagttgtttttagtttatttccataagc 1160710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 498
Target Start/End: Complemental strand, 5133852 - 5133742
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatat-gaaacaattt 487  Q
    ||||||||||||||||| ||||||| |  |||| | ||||||| |||||| |||| |||||  || |||||||| ||||||  ||||||  ||||| |||    
T  5133852 aaacaacttatgacatggtcataagctactttcagcttatttccataagctctcttagataacttttgaaaacagcttatatcttatataaaaacagttt 5133753  T
Q  488 aactttatttt 498  Q
    | |||||||||    
T  5133752 atctttatttt 5133742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 498
Target Start/End: Complemental strand, 8017514 - 8017404
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaattt 487  Q
    ||||| ||||||| |||||||||| |||||||| |  |||||  |||||  ||| ||||||| |||||||||||  ||| || ||||||| ||| |||||    
T  8017514 aaacagcttatgatatgttcataatttgttttctgcgtattttcataagttctccaagatagcttatgaaaacagtttacagcttatatgaaaataattt 8017415  T
Q  488 aactttatttt 498  Q
    |||||| ||||    
T  8017414 aactttgtttt 8017404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 454 - 499
Target Start/End: Complemental strand, 9750961 - 9750915
Alignment:
Q  454 atgaaaacaacttatagtttatatgaaa-caatttaactttattttt 499  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||||||    
T  9750961 atgaaaacaacttatagcttataagaaaacaatttaactttattttt 9750915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 498
Target Start/End: Original strand, 28039322 - 28039432
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaattt 487  Q
    |||||| ||||||| |||||||||| ||||||| | ||||||| ||||    || |||| || |||||||||   ||||||||||||||| ||||||||     
T  28039322 aaacaagttatgacttgttcataagctgttttcagcttatttccataacttttccaagaaagcttatgaaaattgcttatagtttatatgaaaacaattg 28039421  T
Q  488 aactttatttt 498  Q
     ||||||||||    
T  28039422 gactttatttt 28039432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 436
Target Start/End: Original strand, 33525951 - 33526004
Alignment:
Q  383 tcatagaaacaacttatgacatgttcataagttgttttcggtttatttctataa 436  Q
    |||| |||||||||||| |||||| ||||||||| |||| | ||||||||||||    
T  33525951 tcatggaaacaacttataacatgtccataagttggtttcagcttatttctataa 33526004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 35557121 - 35557174
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagat 448  Q
    ||||||||||||||||||| ||||||| | |||||| ||||| | |||||||||    
T  35557121 cttatgacatgttcataagctgttttctgcttatttatataaactctctaagat 35557174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 430
Target Start/End: Complemental strand, 45314948 - 45314907
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttattt 430  Q
    |||||||||||||||| || ||||||||||||| ||||||||    
T  45314948 aaacaacttatgacatatttataagttgttttcagtttattt 45314907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 421
Target Start/End: Original strand, 1056119 - 1056151
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttc 421  Q
    |||||||||||||||||||||| ||||||||||    
T  1056119 aaacaacttatgacatgttcattagttgttttc 1056151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 493
Target Start/End: Original strand, 1893275 - 1893375
Alignment:
Q  393 aacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaacaatttaactt 492  Q
    |||||||||||||| |||||||| ||||| | ||||||  | |||  ||| ||||||| ||  ||||||| ||||||| || || |||| ||||||||||    
T  1893275 aacttatgacatgtacataagttattttcagcttattttcacaagttctccaagatagcttccgaaaacagcttatagcttttacgaaataatttaactt 1893374  T
Q  493 t 493  Q
    |    
T  1893375 t 1893375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 1939323 - 1939395
Alignment:
Q  390 aacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaaca 462  Q
    ||||||||||||||||| |||||| |||||||   ||||||| |||||| ||| |  |||| |||||||||||    
T  1939323 aacaacttatgacatgtccataagctgttttcaacttatttccataagctctccagtatagcttatgaaaaca 1939395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 453 - 481
Target Start/End: Complemental strand, 4550793 - 4550765
Alignment:
Q  453 tatgaaaacaacttatagtttatatgaaa 481  Q
    |||||||||||||||||||||||||||||    
T  4550793 tatgaaaacaacttatagtttatatgaaa 4550765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 467
Target Start/End: Complemental strand, 5826291 - 5826219
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaactta 467  Q
    |||||||||||| |||||  ||||||| | ||||||   ||||| ||||| |||||||| |||||||||||||    
T  5826291 cttatgacatgtgcataaactgttttcagcttatttacgtaagctctctatgatagtttttgaaaacaactta 5826219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 19978031 - 19977995
Alignment:
Q  385 atagaaacaacttatgacatgttcataagttgttttc 421  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  19978031 atagaaacaacttataacacgttcataagttgttttc 19977995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 498
Target Start/End: Complemental strand, 29300719 - 29300615
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaacttt 493  Q
    |||||||||||||||| || | |||||   ||||||| ||||||| |  | ||||| ||||||||||||||||||  ||| ||| |||||||| | ||||    
T  29300719 cttatgacatgttcattagctattttctacttatttccataagcatttaaggatagcttatgaaaacaacttataacttacatgaaaacaattcaccttt 29300620  T
Q  494 atttt 498  Q
    |||||    
T  29300619 atttt 29300615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 477
Target Start/End: Complemental strand, 29510628 - 29510584
Alignment:
Q  433 ataagcactctaagatagtttatgaaaacaacttatagtttatat 477  Q
    |||||| ||| ||||||| ||| ||||||||||||||||||||||    
T  29510628 ataagctctcaaagatagcttaggaaaacaacttatagtttatat 29510584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 421
Target Start/End: Original strand, 32614938 - 32614970
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttc 421  Q
    ||||||||||||||||||||||| |||||||||    
T  32614938 aaacaacttatgacatgttcatatgttgttttc 32614970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 481
Target Start/End: Complemental strand, 40158798 - 40158706
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||| ||||||||||||| ||||||||||||| | ||| ||  |||||| ||| |  |||  ||||||||||||||||| | ||||| ||||    
T  40158798 aaacagcttatgacatgtttataagttgttttcagcttaattacataagctctccagaataacttatgaaaacaacttattgcttatacgaaa 40158706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 460
Target Start/End: Complemental strand, 44443394 - 44443330
Alignment:
Q  396 ttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaa 460  Q
    |||||| ||||||||||||||||||| | ||||||  ||| || ||| ||||||| |||||||||    
T  44443394 ttatgaaatgttcataagttgttttcagcttattttcatatgctctcaaagatagcttatgaaaa 44443330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 421
Target Start/End: Original strand, 44606100 - 44606132
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttc 421  Q
    |||||||||||||||||| ||||||||||||||    
T  44606100 aaacaacttatgacatgtccataagttgttttc 44606132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 5e-17; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 396 - 496
Target Start/End: Original strand, 44151477 - 44151578
Alignment:
Q  396 ttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatat-gaaacaatttaacttta 494  Q
    ||||||||||| |||||| ||||||| | ||||||| ||||||  |  ||||||||||||||||||||||||||| |||||| |||||| ||| ||||||    
T  44151477 ttatgacatgtccataagatgttttcagcttatttccataagcttttcaagatagtttatgaaaacaacttatagcttatatggaaacagttttacttta 44151576  T
Q  495 tt 496  Q
    ||    
T  44151577 tt 44151578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 388 - 476
Target Start/End: Original strand, 3610729 - 3610817
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttata 476  Q
    |||||| || ||||||||| ||||||   ||||| | |||||||||||||| ||||| ||||||||| ||||||||||||||| |||||    
T  3610729 gaaacagctaatgacatgtccataagcctttttcagcttatttctataagctctctaggatagtttacgaaaacaacttatagcttata 3610817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 359 - 479
Target Start/End: Complemental strand, 20553213 - 20553093
Alignment:
Q  359 acttctgagattgttcaaaagatctcatagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaa 458  Q
    |||| ||||| ||||||  ||| || || |||||| |||| |||||||||||||||||||||| | ||||||| |||||| | ||| ||||  || ||||    
T  20553213 acttgtgagactgttcaggagagcttatggaaacagcttacgacatgttcataagttgttttcagattatttccataagctcactaggataacttgtgaa 20553114  T
Q  459 aacaacttatagtttatatga 479  Q
    |||||||||||| || |||||    
T  20553113 aacaacttatagcttgtatga 20553093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 462
Target Start/End: Complemental strand, 7244810 - 7244687
Alignment:
Q  340 tttatctattgacataaatacttctgagatt-gttcaaaagatctcatagaaacaacttatgacatgttcataagttgttttcggtttatttctataagc 438  Q
    |||||||| || |||||| |||||| ||||| |||  ||||| || || ||||||| |||||||||| ||||||||||||||| | ||||||  ||||||    
T  7244810 tttatctactgccataaacacttctaagatttgtttgaaagagctgatggaaacaatttatgacatgctcataagttgttttcagcttattttcataagc 7244711  T
Q  439 actctaagatagtttatgaaaaca 462  Q
     ||| || |||| |||||||||||    
T  7244710 tctccaatatagcttatgaaaaca 7244687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 407 - 481
Target Start/End: Original strand, 27378836 - 27378910
Alignment:
Q  407 tcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||||||||||| ||||||||  |||||| ||| | |||||||||||||||||  || ||||||||||||||    
T  27378836 tcataagttgttttcagtttattttcataagctctccaggatagtttatgaaaacagattgtagtttatatgaaa 27378910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 476
Target Start/End: Original strand, 2825235 - 2825308
Alignment:
Q  403 atgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttata 476  Q
    ||||||||||||| ||||| | ||||||| |||||  ||||| ||||| || ||||||||||||||||||||||    
T  2825235 atgttcataagttattttcagcttatttccataagttctctaggatagcttgtgaaaacaacttatagtttata 2825308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 469
Target Start/End: Complemental strand, 4966273 - 4966156
Alignment:
Q  352 cataaatacttctgagattgttcaaaagatctcatagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagt 451  Q
    |||| |||||| ||||| |||| |  ||| || |||||||| |||||||| |||| |||||||||||||| ||||||||| |||||| ||  | ||| |     
T  4966273 catacatacttgtgagactgtttaggagagcttatagaaaccacttatgatatgtccataagttgttttcagtttatttccataagctcttcaggatggc 4966174  T
Q  452 ttatgaaaacaacttata 469  Q
    ||||||||||| ||||||    
T  4966173 ttatgaaaacagcttata 4966156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 420
Target Start/End: Complemental strand, 36538025 - 36537957
Alignment:
Q  352 cataaatacttctgagattgttcaaaagatctcatagaaacaacttatgacatgttcataagttgtttt 420  Q
    |||||| |||| ||||||||||  | ||| || || |||||||||||||||||||||||||||||||||    
T  36538025 cataaacacttgtgagattgtttgagagaacttatggaaacaacttatgacatgttcataagttgtttt 36537957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 481
Target Start/End: Complemental strand, 38010782 - 38010702
Alignment:
Q  401 acatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||||||||| ||||||  | ||||||| |||||  ||||| ||||| ||||||||||| ||||||| ||||||||||    
T  38010782 acatgttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaa 38010702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 467
Target Start/End: Original strand, 9423583 - 9423662
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaactta 467  Q
    ||||||| |||||||||||||||||||||||||| | ||||||| | |||| ||| | ||||| |||| |||||| ||||    
T  9423583 gaaacaatttatgacatgttcataagttgttttcagcttatttcaagaagctctccaggatagcttattaaaacagctta 9423662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 424 - 498
Target Start/End: Original strand, 30456475 - 30456550
Alignment:
Q  424 tttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaactttatttt 498  Q
    |||||||  |||||| ||| |||||||||||||||||| |||||||  ||||||| ||||||||| ||||||||||    
T  30456475 tttattttcataagctctccaagatagtttatgaaaaccacttataacttatatgaaaacaatttgactttatttt 30456550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 481
Target Start/End: Complemental strand, 11208530 - 11208437
Alignment:
Q  385 atagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    |||||||||||||||||||||| ||||||||||   | | ||||||| ||||     | ||||||| ||||||||||||| ||||||||||||||||    
T  11208530 atagaaacaacttatgacatgtccataagttgt---cagcttatttccataaaatacccaagatagcttatgaaaacaacatatagtttatatgaaa 11208437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 469
Target Start/End: Original strand, 24363601 - 24363671
Alignment:
Q  399 tgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    |||||||| |||||||||||||| | ||||||| |||| | ||| | ||||| ||||||||||||||||||    
T  24363601 tgacatgtccataagttgttttcagcttatttccataacctctccaggatagcttatgaaaacaacttata 24363671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 497
Target Start/End: Complemental strand, 25297005 - 25296955
Alignment:
Q  448 tagtttatgaaaacaacttatagtttatatg-aaacaatttaactttattt 497  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||| ||||    
T  25297005 tagtttatgaaaacagcttatagtttatatgaaaacaatttaacttaattt 25296955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 449
Target Start/End: Complemental strand, 35267436 - 35267382
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagata 449  Q
    ||||||||||||||||| ||||||||| | |||||||||||||| ||| ||||||    
T  35267436 cttatgacatgttcataggttgttttcagcttatttctataagctctccaagata 35267382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 438
Target Start/End: Original strand, 39568313 - 39568363
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagc 438  Q
    |||| |||||||||||||| |||||||||||||||| |||||||| |||||    
T  39568313 gaaataacttatgacatgtccataagttgttttcggcttatttctgtaagc 39568363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 475
Target Start/End: Complemental strand, 39771841 - 39771755
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttat 475  Q
    ||||||||||||| |||| |||||| |||||||   ||||||| || ||||||||| ||||   |||||||||||||||||| ||||    
T  39771841 aaacaacttatgatatgtccataagctgttttcaacttatttccattagcactctatgataacctatgaaaacaacttatagcttat 39771755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 498
Target Start/End: Original strand, 48157106 - 48157220
Alignment:
Q  385 atagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttata-tgaaaca 483  Q
    |||||||||||||||| ||||| |||||| ||||||| | ||||||| |||||  |||    |||| || ||||||||| |||||| ||||| | |||||    
T  48157106 atagaaacaacttatgccatgtccataagctgttttcagcttatttccataagatctcccgaatagcttgtgaaaacaaattatagcttatattaaaaca 48157205  T
Q  484 atttaactttatttt 498  Q
    |||| ||||||||||    
T  48157206 atttcactttatttt 48157220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 385 - 462
Target Start/End: Original strand, 42281500 - 42281577
Alignment:
Q  385 atagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaaca 462  Q
    ||||||||| ||||||||||||  |||| |||||||| | |||||||||||||| |||   ||||| |||||||||||    
T  42281500 atagaaacagcttatgacatgtaaataatttgttttcagcttatttctataagctctcagtgatagcttatgaaaaca 42281577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 19719086 - 19719007
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    ||||||||||||||||||||||||  ||||||| | |||| | ||||||   || ||||||| ||||||||||||||||||    
T  19719086 aaacaacttatgacatgttcataaactgttttcagcttatctttataagtgatccaagatag-ttatgaaaacaacttata 19719007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 481
Target Start/End: Original strand, 25670576 - 25670668
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||||||||||||||| |||| |||||||| | ||||||  | |||| ||| ||||||  |||| ||||||| | |||| ||||||||||    
T  25670576 aaacaacttatgacatgttaataaattgttttcagcttattttcacaagctctccaagatatgttataaaaacaattgatagcttatatgaaa 25670668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 437
Target Start/End: Complemental strand, 28844570 - 28844522
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataag 437  Q
    |||||||||||||||||| ||| |||||||||| ||||||||| |||||    
T  28844570 aaacaacttatgacatgtccatcagttgttttcagtttatttcgataag 28844522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 37064218 - 37064324
Alignment:
Q  396 ttatgacatgttcataagttgttttcggtttatttctataagcactctaagatag--tttatgaaaacaactt-atagtttatatg-aaacaatttaact 491  Q
    |||||||||||| ||||||||||||  ||||||||  |||||| ||||| |||||  | |||||||||||||| | |||||||||| ||||||||  |||    
T  37064218 ttatgacatgtt-ataagttgttttaagtttattttcataagctctctatgatagcttatatgaaaacaacttaagagtttatatgaaaacaattcgact 37064316  T
Q  492 ttattttt 499  Q
    ||||||||    
T  37064317 ttattttt 37064324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 460
Target Start/End: Original strand, 45859516 - 45859587
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaa 460  Q
    |||||||| ||||||||||||||| ||||||||| | |||||||||||||| ||  | |||||| ||||||||    
T  45859516 gaaacaacatatgacatgttcata-gttgttttcagcttatttctataagctcttcatgatagtctatgaaaa 45859587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 421
Target Start/End: Complemental strand, 8341911 - 8341876
Alignment:
Q  386 tagaaacaacttatgacatgttcataagttgttttc 421  Q
    ||||||||||||||||||||| ||||||||||||||    
T  8341911 tagaaacaacttatgacatgtccataagttgttttc 8341876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 462
Target Start/End: Complemental strand, 9038221 - 9038119
Alignment:
Q  359 acttctgagattgttcaaaagatctcatagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaa 458  Q
    |||| ||||| |||||| |||| || ||| ||||| |||||||||||||||||| |||||||| | ||||||  | |||  ||| | |||||||||||||    
T  9038221 acttatgagaatgttcagaagaacttataaaaacagcttatgacatgttcataa-ttgttttcagcttattttcacaagttctccatgatagtttatgaa 9038123  T
Q  459 aaca 462  Q
    ||||    
T  9038122 aaca 9038119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 444
Target Start/End: Original strand, 12234875 - 12234934
Alignment:
Q  385 atagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactcta 444  Q
    ||||||||||||||||||||||  ||||| ||||||| | ||||||| |||||| |||||    
T  12234875 atagaaacaacttatgacatgtctataagctgttttcagcttatttccataagctctcta 12234934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 469
Target Start/End: Original strand, 15075088 - 15075155
Alignment:
Q  402 catgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    ||||| |||||| ||||||  | ||||||| |||||| ||||||| ||||||||||||| ||||||||    
T  15075088 catgtacataagctgtttttagcttatttccataagctctctaaggtagtttatgaaaataacttata 15075155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 498
Target Start/End: Original strand, 22296273 - 22296328
Alignment:
Q  444 aagatagtttatgaaaacaacttatagtttatatg-aaacaatttaactttatttt 498  Q
    |||||||||||||||||||| |||||| ||||| | ||| ||||||||||||||||    
T  22296273 aagatagtttatgaaaacaatttataggttataggaaaataatttaactttatttt 22296328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 462
Target Start/End: Original strand, 33645901 - 33646023
Alignment:
Q  340 tttatctattgacataaatacttctgagattg-ttcaaaagatctcatagaaacaacttatgacatgttcataagttgttttcggtttatttctataagc 438  Q
    ||||||||||||| |||| |||| ||||| || ||  | ||| || || |||||||||||||||||||  ||||||||||||  | ||||||| ||||||    
T  33645901 tttatctattgacgtaaaaacttgtgagactggttggagagagcttatggaaacaacttatgacatgtctataagttgtttttaggttatttccataagc 33646000  T
Q  439 actctaagatagtttatgaaaaca 462  Q
     |||  |||||| |||||||||||    
T  33646001 tctc-cagatagcttatgaaaaca 33646023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 460
Target Start/End: Complemental strand, 39630694 - 39630603
Alignment:
Q  370 tgttcaaaagatctcatagaaacaacttatgacatgttcataagttgttttc-ggtttatttctataagcactctaagatagtttatgaaaa 460  Q
    ||||||| ||| || ||| |||||||||||  |||||| ||||||||||||| || ||||||| |||| | ||| ||||||||||| |||||    
T  39630694 tgttcaagagagcttatataaacaacttatagcatgtttataagttgttttcaggcttatttcaataaactctccaagatagtttacgaaaa 39630603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 498
Target Start/End: Complemental strand, 44910661 - 44910574
Alignment:
Q  412 agttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaacaa-tttaactttatttt 498  Q
    |||||||||||| ||||||| | |||| ||| | ||||||||||||||||||||| ||| || | ||||| || ||| ||||||||||    
T  44910661 agttgttttcggcttatttccacaagctctccatgatagtttatgaaaacaacttttagcttgtgtgaaaaaagtttgactttatttt 44910574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 481
Target Start/End: Complemental strand, 46082116 - 46082022
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagata--gtttatgaaaacaacttatagtttatatgaaa 481  Q
    |||||||||||||||||  |||||||||||||| | ||||||  |||||| ||| |  |||  || |||||||||||||||||  ||||||||||    
T  46082116 aaacaacttatgacatgaccataagttgttttcagcttattttcataagctctccagaatagcgtctatgaaaacaacttataacttatatgaaa 46082022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 498
Target Start/End: Complemental strand, 46825179 - 46825068
Alignment:
Q  390 aacaacttatgacatgttcataagttg-ttttcggtttatttct-ataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatt 486  Q
    ||||||||||||||||| ||  ||||| ||||  | |||||||| |||||||||| ||||||| ||||||||||   |||| | ||||||| ||||||||    
T  46825179 aacaacttatgacatgtccacgagttgttttttagcttatttctcataagcactccaagatagcttatgaaaacggtttatggcttatatgaaaacaatt 46825080  T
Q  487 taactttatttt 498  Q
    | ||||||||||    
T  46825079 tgactttatttt 46825068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 450
Target Start/End: Complemental strand, 941621 - 941559
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatag 450  Q
    ||||||||||||||||||| ||||||  |||||   ||||||||||||||| |||| ||||||    
T  941621 gaaacaacttatgacatgtccataagcagttttaaatttatttctataagctctctgagatag 941559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 498
Target Start/End: Complemental strand, 12110440 - 12110330
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttata-tgaaacaattt 487  Q
    ||||||||||||||||||||| ||  ||||||  | ||||||  |||||  ||  ||||||| ||||||||||| ||||||| |||||   |||||||||    
T  12110440 aaacaacttatgacatgttcacaaactgtttttagattattttcataagttcttcaagatagcttatgaaaacagcttatagcttataccaaaacaattt 12110341  T
Q  488 aactttatttt 498  Q
     ||||||||||    
T  12110340 gactttatttt 12110330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 492
Target Start/End: Original strand, 20881680 - 20881730
Alignment:
Q  443 taagatagtttatgaaaacaacttatagtttata-tgaaacaatttaactt 492  Q
    |||||||||||||||||||||||||||| || ||  |||||||||||||||    
T  20881680 taagatagtttatgaaaacaacttatagcttgtacggaaacaatttaactt 20881730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 431
Target Start/End: Original strand, 20888384 - 20888426
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttc 431  Q
    |||||||||||| |||||||||||||||||||| | |||||||    
T  20888384 aaacaacttatgccatgttcataagttgttttcagcttatttc 20888426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 498
Target Start/End: Original strand, 22283754 - 22283844
Alignment:
Q  409 ataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttata-tgaaacaatttaactttatttt 498  Q
    ||||| ||||||| | ||||||| |||||  ||||||||| |||||||||||||  |||||| | |||   ||||||||||||||||||||    
T  22283754 ataagctgttttcagcttatttccataagttctctaagatggtttatgaaaacagtttatagctgatacaaaaacaatttaactttatttt 22283844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 473
Target Start/End: Original strand, 47559601 - 47559675
Alignment:
Q  399 tgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagttt 473  Q
    ||||||||||||||||||||||||| | ||||  |||||  ||| || |||  ||||||||||| ||||||||||    
T  47559601 tgacatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagttt 47559675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 481
Target Start/End: Original strand, 3500956 - 3501048
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    |||| |||||||||||||| ||| || ||||||| | ||||||| ||| ||  | || ||||||| ||||| |||||||||| |||||||||||    
T  3500956 gaaataacttatgacatgtacatcagctgttttcagcttatttccatacgct-tataggatagttaatgaatacaacttatattttatatgaaa 3501048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 481
Target Start/End: Original strand, 9527143 - 9527172
Alignment:
Q  452 ttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||||||||||||||||||||||||||    
T  9527143 ttatgaaaacaacttatagtttatatgaaa 9527172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 497
Target Start/End: Original strand, 28340878 - 28340943
Alignment:
Q  433 ataagcactctaagatagtttatgaaaacaacttatagtttatatga-aacaatttaactttattt 497  Q
    |||||| ||||| ||||| ||||||||||| ||||||| |||||||| |||||||| |||| ||||    
T  28340878 ataagctctctaggatagcttatgaaaacagcttatagcttatatgacaacaatttgacttcattt 28340943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 469
Target Start/End: Complemental strand, 39360104 - 39360023
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    ||||||||||||||||| | ||||||||| |||| | ||||||| |||||| | | | ||||| || |||||||| ||||||    
T  39360104 gaaacaacttatgacatatccataagttgctttcagcttatttcaataagctcgccaggatagcttttgaaaacatcttata 39360023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 498
Target Start/End: Complemental strand, 39907870 - 39907773
Alignment:
Q  402 catgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttata-tgaaacaatttaactttatttt 498  Q
    ||||||||| || ||||||| | ||||||  || ||  |||||||||||||||||||||||  |||||| |||||   |||||||||||| |||||||    
T  39907870 catgttcattagctgttttcagcttattttcattagttctctaagatagtttatgaaaacagtttatagcttatacaaaaacaatttaaccttatttt 39907773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 498
Target Start/End: Complemental strand, 44241903 - 44241830
Alignment:
Q  425 ttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaacaatttaactttatttt 498  Q
    ||||||||||||||  |  ||||||| ||||||||||||||||||| |||||  |||  | |||||||||||||    
T  44241903 ttatttctataagctattcaagatagcttatgaaaacaacttataggttatacaaaaatagttaactttatttt 44241830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 421
Target Start/End: Original strand, 1645690 - 1645722
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttc 421  Q
    ||||||||||||||||||| |||||||||||||    
T  1645690 aaacaacttatgacatgtttataagttgttttc 1645722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 421
Target Start/End: Complemental strand, 11048107 - 11048075
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttc 421  Q
    ||||||||||||||||||||||||| |||||||    
T  11048107 aaacaacttatgacatgttcataagctgttttc 11048075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 420
Target Start/End: Complemental strand, 21248007 - 21247975
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgtttt 420  Q
    |||| ||||||||||||||||||||||||||||    
T  21248007 gaaataacttatgacatgttcataagttgtttt 21247975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 377 - 421
Target Start/End: Complemental strand, 29290425 - 29290381
Alignment:
Q  377 aagatctcatagaaacaacttatgacatgttcataagttgttttc 421  Q
    ||||||| || ||||||||||||||||||| |||||| |||||||    
T  29290425 aagatcttatggaaacaacttatgacatgtccataagctgttttc 29290381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 481
Target Start/End: Complemental strand, 30535643 - 30535551
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||||||||| |||||| |||| ||||||| | ||||||  ||| |  || |||||||| ||||| ||||| ||||||| ||||| ||||    
T  30535643 aaacaacttatgatatgttcgtaagctgttttcaggttattttcatatgttctataagatagcttatggaaacagcttatagattatacgaaa 30535551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 498
Target Start/End: Complemental strand, 27650 - 27546
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaacttt 493  Q
    |||||||||||   ||||||||||||| | ||||||| | | ||   | ||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  27650 cttatgacatggctataagttgttttcagcttatttccacacgcttaccaagatagtttatgaaaacaacttatagtttatatgaaaacaatttgacttt 27551  T
Q  494 atttt 498  Q
    |||||    
T  27550 atttt 27546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 498
Target Start/End: Complemental strand, 4558879 - 4558768
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatt 486  Q
    |||| |||||||||  |||  ||||||||||||  ||||||||| |||||| ||||| ||||| ||||| ||||| |||||||  |||||| ||| ||||    
T  4558879 gaaataacttatgatgtgtctataagttgtttttagtttatttccataagctctctaggatagcttatggaaacagcttatagcatatatgaaaataatt 4558780  T
Q  487 taactttatttt 498  Q
    ||||||||||||    
T  4558779 taactttatttt 4558768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 463
Target Start/End: Original strand, 2458562 - 2458630
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaa 463  Q
    |||||| |||||||||||| ||||||| ||||||||| |||||| ||||| ||||| ||||| ||||||    
T  2458562 cttatggcatgttcataagctgttttcagtttatttccataagctctctaggatagcttatgtaaacaa 2458630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 419 - 498
Target Start/End: Complemental strand, 10437934 - 10437855
Alignment:
Q  419 ttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaacaatttaactttatttt 498  Q
    ||||| |||||||||||||| ||| ||||||| |||||||| | ||||| || |||||| ||||| ||| ||||||||||    
T  10437934 ttcggcttatttctataagctctcgaagatagcttatgaaacctacttaaagcttatataaaacagtttgactttatttt 10437855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 471
Target Start/End: Complemental strand, 38561807 - 38561724
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagt 471  Q
    ||||||||||||||||| || | ||| ||||||| ||||||||  || | | |||||  |||||||||||||||||||||||||    
T  38561807 gaaacaacttatgacatatttacaagctgttttccgtttattttcatgaactctctataatagtttatgaaaacaacttatagt 38561724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 498
Target Start/End: Original strand, 39551198 - 39551309
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaa-acaatt 486  Q
    ||||||||||||||||||| || ||| ||||||    |||||| ||||||| ||| | || || ||||||||||||||||||| || |||||| ||| ||    
T  39551198 gaaacaacttatgacatgtccaaaagctgtttttaacttatttttataagctctccaggaaagcttatgaaaacaacttatagcttgtatgaagacagtt 39551297  T
Q  487 taactttatttt 498  Q
    || |||||||||    
T  39551298 tagctttatttt 39551309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 498
Target Start/End: Original strand, 2594987 - 2595097
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaattt 487  Q
    ||||||||||||||||||||||||||||||||| | |||||   |||||   |||||   || ||||||||||||||||| | |  || | |||||||||    
T  2594987 aaacaacttatgacatgttcataagttgttttcagcttattctcataagttgtctaatgcagcttatgaaaacaacttatggctagtacgaaaacaattt 2595086  T
Q  488 aactttatttt 498  Q
    |||||||||||    
T  2595087 aactttatttt 2595097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 481
Target Start/End: Original strand, 43704363 - 43704460
Alignment:
Q  386 tagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtt--tatgaaaacaacttatagtttatatgaaa 481  Q
    |||||||||||||||||||||||||||  ||||||  | ||||||| ||||||  |  | ||||  |  |||||||||||||||||||||||||||||    
T  43704363 tagaaacaacttatgacatgttcataaactgttttaagcttatttccataagcttttgaggataactcttatgaaaacaacttatagtttatatgaaa 43704460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 389 - 462
Target Start/End: Original strand, 779051 - 779124
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaaca 462  Q
    |||||||||||||||||||||||||||||||||   ||||||   ||  | ||| |||||||||||||||||||    
T  779051 aaacaacttatgacatgttcataagttgttttcatcttattttggtacactctccaagatagtttatgaaaaca 779124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 385 - 462
Target Start/End: Original strand, 4055602 - 4055679
Alignment:
Q  385 atagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaaca 462  Q
    ||||||| |||||||||||||| |||||  ||||||| | |||||||  ||||| |||| |||||| |||||||||||    
T  4055602 atagaaataacttatgacatgtccataaactgttttcagcttatttccttaagctctctgagatagcttatgaaaaca 4055679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 389 - 466
Target Start/End: Original strand, 7918436 - 7918513
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaactt 466  Q
    |||||||||| |||||||||||||| ||||| |   ||||||| |||||| ||| ||||||| ||| |||||||||||    
T  7918436 aaacaacttaagacatgttcataagctgtttccaacttatttcaataagctctccaagatagcttacgaaaacaactt 7918513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 389 - 481
Target Start/End: Complemental strand, 29973162 - 29973069
Alignment:
Q  389 aaacaacttatgacatgttcataagttg-ttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    |||||||||| ||||||| || ||| || ||||| ||||||||| |||| | ||| | ||||| ||||||||||||||||||| |||| |||||    
T  29973162 aaacaacttacgacatgtccaaaagctggttttcagtttatttccataaactctcaaggatagcttatgaaaacaacttatagcttatgtgaaa 29973069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 476
Target Start/End: Complemental strand, 8062390 - 8062322
Alignment:
Q  408 cataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttata 476  Q
    |||||| ||||||| | ||||||| |||| | ||||||||||| ||||||||||| ||||||| |||||    
T  8062390 cataagatgttttcagcttatttccataatctctctaagatagcttatgaaaacagcttatagcttata 8062322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 452 - 500
Target Start/End: Original strand, 11059748 - 11059796
Alignment:
Q  452 ttatgaaaacaacttatagtttatatgaaacaatttaactttatttttg 500  Q
    ||||||||||||| ||||| |||||||||||||||| || |||||||||    
T  11059748 ttatgaaaacaacctatagcttatatgaaacaatttgaccttatttttg 11059796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 28769337 - 28769421
Alignment:
Q  397 tatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||| |||| |||||||||||||| | ||||||| |||| | ||| || |||| ||||||||||| ||||||| ||||| ||||    
T  28769337 tatgatatgtccataagttgttttcagcttatttccataaactctccaaaatagcttatgaaaacagcttatagcttataagaaa 28769421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 481
Target Start/End: Original strand, 39866723 - 39866818
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatag--tttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||||||||  ||||| |||||| ||||||| ||||||||  |||||| ||  |||||||  | ||||||||||| ||||||||| |||||||    
T  39866723 gaaacaacttatagcatgtccataagctgttttcagtttattttcataagctcttcaagatagcttatatgaaaacaatttatagtttttatgaaa 39866818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 498
Target Start/End: Original strand, 41336645 - 41336745
Alignment:
Q  399 tgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaactttattt 497  Q
    |||| |||| ||||||||||||| | |||||||   |||| |||  |||||| |||||||||||| || ||||||||||| ||||||||| ||| |||||    
T  41336645 tgacttgtttataagttgttttcagcttatttccgcaagctctcctagatagcttatgaaaacaagttctagtttatatgaaaacaatttgactatattt 41336744  T
Q  498 t 498  Q
    |    
T  41336745 t 41336745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 449
Target Start/End: Original strand, 41606893 - 41606953
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagata 449  Q
    ||||| ||||||||||||||| ||||||||||| | ||||||| |||||| ||||| ||||    
T  41606893 aaacagcttatgacatgttcaaaagttgttttcagcttatttccataagctctctaggata 41606953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 460
Target Start/End: Complemental strand, 14949942 - 14949875
Alignment:
Q  393 aacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaa 460  Q
    |||||||||||||| |||||| ||||||| | |||||||||||| | || || ||||| |||||||||    
T  14949942 aacttatgacatgtccataagctgttttcagcttatttctataatctctttaggatagcttatgaaaa 14949875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 477
Target Start/End: Complemental strand, 30389170 - 30389091
Alignment:
Q  398 atgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatat 477  Q
    |||||||||||||||||||||||| | ||||||  |||||  ||||| || || ||||||||||| | ||||| ||||||    
T  30389170 atgacatgttcataagttgttttcagcttattttcataagttctctaggaaagcttatgaaaacagcgtatagcttatat 30389091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 34770921 - 34770862
Alignment:
Q  440 ctctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaactttatttt 498  Q
    ||||| ||||| ||||||||||||||||||| ||| ||| ||||||||| ||||||||||    
T  34770921 ctctaggatagcttatgaaaacaacttatagcttaaatgaaaacaatttgactttatttt 34770862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 460
Target Start/End: Original strand, 42215084 - 42215143
Alignment:
Q  401 acatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaa 460  Q
    ||||||||||||||||||||| | ||||||  |||||| ||| ||||||| |||||||||    
T  42215084 acatgttcataagttgttttcagcttatttacataagctctccaagatagcttatgaaaa 42215143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 435
Target Start/End: Complemental strand, 3254305 - 3254259
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctata 435  Q
    ||||| ||||||||||||||||||| ||||||| | |||||||||||    
T  3254305 aaacagcttatgacatgttcataagctgttttcagcttatttctata 3254259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 421
Target Start/End: Complemental strand, 4281628 - 4281594
Alignment:
Q  387 agaaacaacttatgacatgttcataagttgttttc 421  Q
    ||||||||| |||||||||||||||||||||||||    
T  4281628 agaaacaacatatgacatgttcataagttgttttc 4281594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 425 - 498
Target Start/End: Original strand, 6509329 - 6509403
Alignment:
Q  425 ttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaa-acaatttaactttatttt 498  Q
    ||||||| |||||| ||| | ||||| ||||||||||| ||||||| |||||| || ||||||| ||||||||||    
T  6509329 ttatttcaataagctctccaggatagcttatgaaaacagcttatagcttatataaatacaatttgactttatttt 6509403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 498
Target Start/End: Original strand, 9956819 - 9956912
Alignment:
Q  404 tgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaacaatttaactttatttt 498  Q
    ||||||||||| |||||| | ||||||  |||||  ||| ||||||| ||||||||||||||||||  ||||| |||| |||  |||||||||||    
T  9956819 tgttcataagtagttttcagcttattttcataagttctccaagatagattatgaaaacaacttataacttataggaaa-aataaaactttatttt 9956912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 359 - 469
Target Start/End: Original strand, 11569417 - 11569527
Alignment:
Q  359 acttctgagattgttcaaaagatctcatagaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaa 458  Q
    |||| ||||| |||| || ||| || || |||||| |||||||||||| |||||||||||||| | ||||||  | || | ||| | ||||| |||||||    
T  11569417 acttgtgagactgtttaagagagcttatggaaacagcttatgacatgtacataagttgttttcagcttattttcaaaatctctccatgatagcttatgaa 11569516  T
Q  459 aacaacttata 469  Q
    |||| ||||||    
T  11569517 aacagcttata 11569527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 463
Target Start/End: Complemental strand, 12851256 - 12851182
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaa 463  Q
    ||||| ||||| ||||||||||||| ||||||||| ||||||  |||||| ||| | || || ||||||||||||    
T  12851256 aaacagcttataacatgttcataagatgttttcggcttattttcataagctctcaaggaaagcttatgaaaacaa 12851182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 498
Target Start/End: Original strand, 16210932 - 16210986
Alignment:
Q  445 agatagtttatgaaaacaacttatagtttatatg-aaacaatttaactttatttt 498  Q
    |||||| || |||||||||||||||| ||||||| ||||||| ||||||||||||    
T  16210932 agataggttttgaaaacaacttatagcttatatgaaaacaatgtaactttatttt 16210986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 478
Target Start/End: Original strand, 30191130 - 30191220
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg 478  Q
    |||||||||||||||||||||| || |||||||| | ||||||| |||| || |  | ||||| |||| |||| | ||||||| |||||||    
T  30191130 gaaacaacttatgacatgttcaaaacttgttttcagcttatttccataaacatttcaggatagcttatcaaaatagcttatagattatatg 30191220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 462
Target Start/End: Complemental strand, 30259195 - 30259121
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaaca 462  Q
    |||||| ||||||| ||||  ||||||||||||| ||||||||| |||||  ||| |||||| ||||| ||||||    
T  30259195 gaaacagcttatgatatgtctataagttgttttcagtttatttccataagttctccaagataatttataaaaaca 30259121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 469
Target Start/End: Original strand, 30277241 - 30277315
Alignment:
Q  395 cttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    |||| ||||||  |||||||||||||| | ||||||| |||| | ||||| ||||| ||||||||||| ||||||    
T  30277241 cttaggacatggccataagttgttttcagcttatttccataaactctctaggatagcttatgaaaacagcttata 30277315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 481
Target Start/End: Complemental strand, 7714323 - 7714230
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    |||||||||||||| ||||  || || |||||||   ||||||  || ||| ||| ||||||| | ||||||||||||||||||| ||||||||    
T  7714323 gaaacaacttatgaaatgtcgatgagctgttttcaacttattttcatgagctctccaagatagctcatgaaaacaacttatagttgatatgaaa 7714230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 481
Target Start/End: Original strand, 9834834 - 9834871
Alignment:
Q  444 aagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  9834834 aagatagcttatgaaaacaacttatagcttatatgaaa 9834871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 430
Target Start/End: Complemental strand, 10358654 - 10358617
Alignment:
Q  393 aacttatgacatgttcataagttgttttcggtttattt 430  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  10358654 aacttatgacatgttcataagtcgttttcgatttattt 10358617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 469
Target Start/End: Complemental strand, 11185302 - 11185221
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    |||||| ||||| |||||||||||||||||||||   ||||||| || ||| ||| | ||||| | | ||||||||||||||    
T  11185302 gaaacatcttataacatgttcataagttgttttcaacttatttccatcagctctccatgatagctaacgaaaacaacttata 11185221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 466
Target Start/End: Complemental strand, 30918192 - 30918116
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaactt 466  Q
    ||||||||| |||||| |||||||||||||||| | ||||||| |||||| ||| |||| |  ||||||||| |||||    
T  30918192 aaacaacttgtgacat-ttcataagttgttttcagcttatttccataagctctccaagaaaacttatgaaaagaactt 30918116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 341 - 421
Target Start/End: Complemental strand, 1561405 - 1561325
Alignment:
Q  341 ttatctattgacataaatacttctgagattgttcaaaagatctcatagaaacaacttatgacatgttcataagttgttttc 421  Q
    ||||||| || |||||| |||| ||||||||||  | ||| |||| | ||||||||||||| || | ||||||||||||||    
T  1561405 ttatctaatggcataaacacttgtgagattgtttgagagagctcacaaaaacaacttatgatatatccataagttgttttc 1561325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 421
Target Start/End: Complemental strand, 4390293 - 4390261
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttc 421  Q
    |||||||||||| ||||||||||||||||||||    
T  4390293 aaacaacttatggcatgttcataagttgttttc 4390261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 498
Target Start/End: Original strand, 7918789 - 7918873
Alignment:
Q  415 tgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaactttatttt 498  Q
    ||||||| | ||||||| | |||| ||  ||||||| ||||||||||||||||||| ||| | | ||| ||||||||||||||||    
T  7918789 tgttttcagcttatttccacaagctctacaagatagcttatgaaaacaacttatagcttacaagaaaaaaatttaactttatttt 7918873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 469
Target Start/End: Complemental strand, 8060733 - 8060669
Alignment:
Q  405 gttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 469  Q
    ||||||||||| ||||| | ||||||| |||||| ||||| ||| | ||||||||||| ||||||    
T  8060733 gttcataagttattttcagcttatttccataagctctctaggattgcttatgaaaacagcttata 8060669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 440 - 499
Target Start/End: Complemental strand, 8062553 - 8062493
Alignment:
Q  440 ctctaagatagtttatgaaaacaacttatagtttatatg-aaacaatttaactttattttt 499  Q
    ||||||||||| |||||| |||| ||||||| ||||||| ||||||||| ||||| |||||    
T  8062553 ctctaagatagcttatgagaacatcttatagcttatatgaaaacaatttgacttttttttt 8062493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 421
Target Start/End: Complemental strand, 8629536 - 8629504
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttc 421  Q
    ||||||||||||||||| |||||||||||||||    
T  8629536 aaacaacttatgacatgatcataagttgttttc 8629504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 390 - 438
Target Start/End: Original strand, 13000415 - 13000463
Alignment:
Q  390 aacaacttatgacatgttcataagttgttttcggtttatttctataagc 438  Q
    ||||||||||||||||| || ||||||||||| | ||||||| ||||||    
T  13000415 aacaacttatgacatgtccacaagttgttttcagcttatttccataagc 13000463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 436
Target Start/End: Original strand, 25869255 - 25869303
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataa 436  Q
    |||| |||||||||||||| |||||||||||||| | ||||||| ||||    
T  25869255 gaaataacttatgacatgtccataagttgttttcagcttatttccataa 25869303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 460
Target Start/End: Original strand, 28784793 - 28784856
Alignment:
Q  396 ttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaa 460  Q
    |||||||||||||||||| | ||||| | |||||| || |||| ||||||||||| |||||||||    
T  28784793 ttatgacatgttcataagct-ttttcagcttatttttacaagctctctaagatagcttatgaaaa 28784856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 481
Target Start/End: Original strand, 29417698 - 29417786
Alignment:
Q  393 aacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatatgaaa 481  Q
    ||||||||| || |||||||| | ||||  | |||||  ||||||  ||| | ||||||||||||||||| ||||||||||||| ||||    
T  29417698 aacttatgaaattttcataagctatttttagcttattcatataagttctcaatgatagtttatgaaaacatcttatagtttatacgaaa 29417786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 470
Target Start/End: Original strand, 30627929 - 30627973
Alignment:
Q  426 tatttctataagcactctaagatagtttatgaaaacaacttatag 470  Q
    |||||| |||||| ||||||||||  |||||||||||||||||||    
T  30627929 tatttccataagctctctaagataacttatgaaaacaacttatag 30627973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 476
Target Start/End: Complemental strand, 31862570 - 31862486
Alignment:
Q  392 caacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttata 476  Q
    ||||||||||| | | |||||| ||||||| | ||||||  |||||| ||||| ||||  ||||||||||| ||||||| |||||    
T  31862570 caacttatgacctatgcataagctgttttcagcttattttcataagctctctaggataacttatgaaaacatcttatagcttata 31862486  T

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Target: scaffold0147 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 450
Target Start/End: Original strand, 12693 - 12755
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatag 450  Q
    ||||||||||||||||||| |||||||||||||| | |||  || |||||| |||||||||||    
T  12693 gaaacaacttatgacatgtccataagttgttttcagcttagctccataagctctctaagatag 12755  T

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Target: scaffold0153 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 385 - 438
Target Start/End: Original strand, 6480 - 6533
Alignment:
Q  385 atagaaacaacttatgacatgttcataagttgttttcggtttatttctataagc 438  Q
    ||||||||||| ||||||||||  ||||||||||||| ||||||||| ||||||    
T  6480 atagaaacaacctatgacatgtctataagttgttttcagtttatttccataagc 6533  T

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Target: scaffold0153; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 385 - 438
Target Start/End: Original strand, 13500 - 13553
Alignment:
Q  385 atagaaacaacttatgacatgttcataagttgttttcggtttatttctataagc 438  Q
    ||||||||||| ||||||||||  ||||||||||||| ||||||||| ||||||    
T  13500 atagaaacaacctatgacatgtctataagttgttttcagtttatttccataagc 13553  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 466
Target Start/End: Complemental strand, 306407 - 306329
Alignment:
Q  388 gaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaactt 466  Q
    |||||| |||||||||||  |||||| ||||||| | ||| ||  |||||| ||||| ||||| |||||||||||||||    
T  306407 gaaacagcttatgacatgcccataagctgttttcagcttacttacataagctctctaggatagcttatgaaaacaactt 306329  T

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Target: scaffold0311 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 441
Target Start/End: Original strand, 10607 - 10659
Alignment:
Q  389 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcact 441  Q
    |||||||| ||||||||| |||||||||||||| | ||||||| |||| ||||    
T  10607 aaacaactaatgacatgtccataagttgttttcagcttatttccataaacact 10659  T

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