View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1121_low_50 (Length: 251)
Name: NF1121_low_50
Description: NF1121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1121_low_50 |
 |  |
|
| [»] scaffold0188 (1 HSPs) |
 |  |  |
|
| [»] scaffold0003 (1 HSPs) |
 |  |  |
|
| [»] scaffold0067 (1 HSPs) |
 |  |  |
|
| [»] scaffold0004 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 150; Significance: 2e-79; HSPs: 14)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 9240875 - 9240653
Alignment:
| Q |
1 |
ccatatgcttcccaagagtttgtgtcttattagctgcttgtgatgtttcattttcatatttctgctttaattaaatgttaatacatgtttatccc-ctgt |
99 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||| | ||| |
|
|
| T |
9240875 |
ccatatgcttgccaagagtttgtgtcttattagctgcatgtgatgtttcattttcatatttctgctttaattaaaggttaatccatgtttatctctctga |
9240776 |
T |
 |
| Q |
100 |
aatattatcgatttccgatttacctctctatnnnnnnntttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaa |
199 |
Q |
| |
|
|||||||||||||| || ||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
9240775 |
aatattatcgattttcggtttacctctatataaaattttttgtttagattcaaaccctgtaacttgaagattcttcagttttaaaccttcatggcatcaa |
9240676 |
T |
 |
| Q |
200 |
attatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
9240675 |
attatgaaatttaaggtactttc |
9240653 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 139 - 222
Target Start/End: Complemental strand, 33864321 - 33864238
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| ||||| |||||| |||||||||||||| |||||||||||| |||| |
|
|
| T |
33864321 |
ttgtttagattccaaccctgtaatttgaagattctttggttttggacctttatggcatcaaattacaaaatttaaggtattttc |
33864238 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 139 - 222
Target Start/End: Original strand, 33916601 - 33916684
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| ||||| |||||| |||||||||||||| |||||||||||| |||| |
|
|
| T |
33916601 |
ttgtttagattccaaccctgtaatttgaagattctttggttttggacctttatggcatcaaattacaaaatttaaggtattttc |
33916684 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 7261587 - 7261505
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtacttt |
221 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||||| ||||| |||||||||| ||||||||| ||||| |||||||||| |
|
|
| T |
7261587 |
ttgtttagattccaaccctgtaatttgaacattctttggttttggaccttcatgacatcaaatttcaaaattgaaggtacttt |
7261505 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 13437118 - 13437034
Alignment:
| Q |
138 |
tttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
|||||||||||||||||| ||||| |||| |||| || |||| |||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
13437118 |
tttgtttagattccaaccgtgtaatttgatgattttttgattttggaccttcatgacatcaaattacaaaatttaaggtactttc |
13437034 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 44228544 - 44228460
Alignment:
| Q |
138 |
tttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
|||||||||||| |||||| |||| |||||||||||| | ||| ||||||| |||||||||||| ||||||||||||||||| |
|
|
| T |
44228544 |
tttgtttagattgcaacccagtaatttgaagattctttgggtttggaccttcgtggcatcaaatttcaaaatttaaggtactttc |
44228460 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 22315210 - 22315274
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaatta |
203 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| || |||| |||||||||||||||| |||| |
|
|
| T |
22315210 |
ttgtttagattccaaccctgtaatttgaagattttttgattttggaccttcatggcatcatatta |
22315274 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 220
Target Start/End: Original strand, 17890132 - 17890212
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactt |
220 |
Q |
| |
|
||||||||||||||||||||||| || |||||| || | |||| || | |||| ||||||||||| ||||||||||||||| |
|
|
| T |
17890132 |
ttgtttagattccaaccctgtaatttaaagatttttta-ttttggatcctcatagcatcaaattacaaaatttaaggtactt |
17890212 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 174
Target Start/End: Original strand, 33864115 - 33864150
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattctt |
174 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| |
|
|
| T |
33864115 |
ttgtttagattccaaccctgtaatttgaagattctt |
33864150 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 174
Target Start/End: Complemental strand, 33916807 - 33916772
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattctt |
174 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| |
|
|
| T |
33916807 |
ttgtttagattccaaccctgtaatttgaagattctt |
33916772 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 5469592 - 5469514
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggta |
217 |
Q |
| |
|
||||||||||||||||| ||||| ||||| || || |||| |||||||||||||||||| || |||||||||||| |
|
|
| T |
5469592 |
ttgtttagattccaaccttgtaatttgaattttttttgattttggaccttcatggcatcaaactacaaaatttaaggta |
5469514 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 33465319 - 33465377
Alignment:
| Q |
144 |
tagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaatt |
202 |
Q |
| |
|
|||||| ||||||||||| || || |||||| ||||||||||||| |||||||||||| |
|
|
| T |
33465319 |
tagattacaaccctgtaatttaaatattctttggttttagaccttcttggcatcaaatt |
33465377 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 44078798 - 44078716
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtacttt |
221 |
Q |
| |
|
||||||||||||||||| ||||| |||||||| ||| ||||| ||||||| | ||| ||||| |||||||||||||||| |
|
|
| T |
44078798 |
ttgtttagattccaaccttgtaatttgaagatccttttgttttggaccttcctaacataaaatttcaaaatttaaggtacttt |
44078716 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 44228338 - 44228392
Alignment:
| Q |
138 |
tttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatg |
192 |
Q |
| |
|
|||||||||||| ||||||||||| || ||||||||| ||||| |||||||||| |
|
|
| T |
44228338 |
tttgtttagattacaaccctgtaatttaaagattctttggttttggaccttcatg |
44228392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 21)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 45687693 - 45687771
Alignment:
| Q |
143 |
ttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
45687693 |
ttagattccaaccctgtaatttgaagattcttt-gatttagaccttcatggcatcaaattataaaatttaaggtactttc |
45687771 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 24813033 - 24812949
Alignment:
| Q |
138 |
tttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||||| |||||||||||| | |||||||||||| ||||||||||||||||| |
|
|
| T |
24813033 |
tttgtttagatttcaaccctgtaatttgaagattctttggttttagacctttaaggcatcaaattacaaaatttaaggtactttc |
24812949 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 222
Target Start/End: Original strand, 2936188 - 2936270
Alignment:
| Q |
140 |
tgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
|||||||||||||||| ||||| ||||| ||| || |||||||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
2936188 |
tgtttagattccaaccatgtaatttgaaaattatttggttttagaccttcatgacatcaaattacaaaatttaaggtactttc |
2936270 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 1853399 - 1853315
Alignment:
| Q |
138 |
tttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||| || |||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
1853399 |
tttgtttagattccaaccttgtaatttgaagattttttgattttggaccttcatggcatcaaatttcaaaatttaaggtactttc |
1853315 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 221
Target Start/End: Original strand, 9689226 - 9689370
Alignment:
| Q |
77 |
gttaatacatgtttatcccctgtaatattatcgatttccgatttacctctctatnnnnnnntttgtttagattccaaccctgtaacttgaagattcttca |
176 |
Q |
| |
|
||||||| ||||||| || ||||||||||| ||||||||| |||||| || || |||| ||||||| ||||||||||| ||||||||| || |
|
|
| T |
9689226 |
gttaatatatgtttaccctctgtaatattagcgatttccggtttacccctgta-aaaaaaatttggttagatttcaaccctgtaatttgaagattttttt |
9689324 |
T |
 |
| Q |
177 |
g-ttttagaccttcatggcatcaaattatgaaatttaaggtacttt |
221 |
Q |
| |
|
| |||| |||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
9689325 |
gattttggaccttcatgacatcaaattataaaatttaaggtacttt |
9689370 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 222
Target Start/End: Original strand, 27082593 - 27082677
Alignment:
| Q |
138 |
tttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||||||||| || ||| ||||||||| || |||||||||||||| |
|
|
| T |
27082593 |
tttgtttagattccaacactgtaacttgaagattctttggttttagacatttatgaaatcaaattacaaagtttaaggtactttc |
27082677 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 27195708 - 27195624
Alignment:
| Q |
138 |
tttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||||||||| || ||| ||||||||| || |||||||||||||| |
|
|
| T |
27195708 |
tttgtttagattccaacactgtaacttgaagattctttggttttagacatttatgaaatcaaattacaaagtttaaggtactttc |
27195624 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 222
Target Start/End: Complemental strand, 43394007 - 43393925
Alignment:
| Q |
140 |
tgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
|||||| ||| ||||||||||| ||||||||| || |||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
43394007 |
tgtttaaatttcaaccctgtaatttgaagatttttttattttggaccttcatggcatcaaattacaaaatttaaggtactttc |
43393925 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 19377192 - 19377107
Alignment:
| Q |
138 |
tttgtttagattccaaccc-tgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||||||||||||||||| ||||| |||||||| || |||| |||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
19377192 |
tttgtttagattccaacccctgtaatttgaagatatttttattttggaccttcatggcgtcaaattacaaaatttaaggtactttc |
19377107 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 222
Target Start/End: Original strand, 3092291 - 3092375
Alignment:
| Q |
138 |
tttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
|||||||||||| ||||| ||||| || |||||| || ||||| |||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
3092291 |
tttgtttagatttcaaccttgtaatttaaagattttttgattttaaaccttcattacatcaaattataaaatttaaggtactttc |
3092375 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 222
Target Start/End: Original strand, 42957424 - 42957507
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
|||||||||||| |||||||||| ||||| || || |||| |||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
42957424 |
ttgtttagattctaaccctgtaatttgaattttttttgattttggaccttcatgacatcaaattacaaaatttaaggtactttc |
42957507 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 15331677 - 15331628
Alignment:
| Q |
143 |
ttagattccaaccctgtaacttgaagattcttcagttttagaccttcatg |
192 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||| ||||||||| |
|
|
| T |
15331677 |
ttagattccaaccctgtaacttgaagattctttggtgttataccttcatg |
15331628 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 222
Target Start/End: Original strand, 25601798 - 25601881
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||| || | || | ||||||||| ||||||||| |||||||| |||||||| |
|
|
| T |
25601798 |
ttgtttagattccaaccttgtaatttgaagattttttggcttaaaaccttcatgatatcaaattacaaaatttaatgtactttc |
25601881 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 27082795 - 27082749
Alignment:
| Q |
142 |
tttagattccaaccctgtaacttgaagattcttcagttttagacctt |
188 |
Q |
| |
|
|||||||||||||||||||| ||||||||| || |||||||||||| |
|
|
| T |
27082795 |
tttagattccaaccctgtaatttgaagattatttggttttagacctt |
27082749 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 27195506 - 27195552
Alignment:
| Q |
142 |
tttagattccaaccctgtaacttgaagattcttcagttttagacctt |
188 |
Q |
| |
|
|||||||||||||||||||| ||||||||| || |||||||||||| |
|
|
| T |
27195506 |
tttagattccaaccctgtaatttgaagattatttggttttagacctt |
27195552 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 191
Target Start/End: Complemental strand, 2936392 - 2936339
Alignment:
| Q |
138 |
tttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcat |
191 |
Q |
| |
|
|||||||||||| ||||| ||||| |||||||||||| ||||| ||||||||| |
|
|
| T |
2936392 |
tttgtttagatttcaaccatgtaatttgaagattctttggttttcgaccttcat |
2936339 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 174
Target Start/End: Complemental strand, 8490836 - 8490803
Alignment:
| Q |
141 |
gtttagattccaaccctgtaacttgaagattctt |
174 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
8490836 |
gtttagattccaaccctgtaatttgaagattctt |
8490803 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 10394471 - 10394548
Alignment:
| Q |
143 |
ttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactt |
220 |
Q |
| |
|
||||||| |||| ||||| |||||||||||| ||||| | |||||| |||||||||||| |||||||||| |||| |
|
|
| T |
10394471 |
ttagatttcaactttgtaatttgaagattctttggttttgtatcttcatagcatcaaattataaaatttaaggcactt |
10394548 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 25602002 - 25601949
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatg |
192 |
Q |
| |
|
||||||||||||||| ||||||| ||||||||| ||| |||||| || |||||| |
|
|
| T |
25602002 |
ttgtttagattccaatcctgtaatttgaagatttttcggttttaaacattcatg |
25601949 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 171
Target Start/End: Complemental strand, 3092527 - 3092495
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagatt |
171 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |
|
|
| T |
3092527 |
ttgtttagattccaaccctgtaatttgaagatt |
3092495 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 21074266 - 21074342
Alignment:
| Q |
146 |
gattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||| |||| ||||| || ||||||||| |||||||||||| ||||||||||||| | ||| ||||||||||| |
|
|
| T |
21074266 |
gattctaaccttgtaatttttagattcttctcttttagaccttcgtggcatcaaattacgggattaaaggtactttc |
21074342 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 221
Target Start/End: Original strand, 18359295 - 18359377
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtacttt |
221 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||| |
|
|
| T |
18359295 |
ttgtttagattccaaccctgtaatttgaagattctttagttttagatatacatggcatcaaattacaaaatttaaggtacttt |
18359377 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 5303751 - 5303667
Alignment:
| Q |
138 |
tttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||| || ||||||||||||| |
|
|
| T |
5303751 |
tttgtttagattccaaccctgtaatttgaagattctttggttttagaccttcatgacatcaaattacagaacttaaggtactttc |
5303667 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 222
Target Start/End: Original strand, 55257704 - 55257787
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||| || |||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
55257704 |
ttgtttagattccaaccctataatttgaagatttttttattttggaccttcatggcatcaaattacaaaatttaaggtactttc |
55257787 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 43426505 - 43426423
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtacttt |
221 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||| || |||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
43426505 |
ttgtttagattcgaaccctgtaatttgaagattttttgattttagaccttcatagcatcaaattacaaaatttaaggtacttt |
43426423 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 222
Target Start/End: Complemental strand, 7308308 - 7308225
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||| ||||||||||||| ||| ||||||||| || |||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
7308308 |
ttgttcagattccaaccctataatttgaagatttttttatttttgaccttcatggcatcaaattacaaaatttaaggtactttc |
7308225 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 25124871 - 25124915
Alignment:
| Q |
178 |
ttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
25124871 |
ttttggaccttcatggcatcaaattataaaatttaaggtactttc |
25124915 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 17030829 - 17030744
Alignment:
| Q |
138 |
tttgtttagattccaaccctgtaacttgaagattcttcag-ttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||||| |||| ||||||| ||| || |||||| || | |||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
17030829 |
tttgttttgatttcaaccctctaatttaaagatttttttgattttggaccttcatggcatcaaattacaaaatttaaggtactttc |
17030744 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 25125126 - 25125080
Alignment:
| Q |
78 |
ttaatacatgtttatcccctgtaatattatcgatttccgatttacctc |
125 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||||| ||||||||||| |
|
|
| T |
25125126 |
ttaatacatgttta-cccctgtaatattagcgattttcgatttacctc |
25125080 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 222
Target Start/End: Complemental strand, 25159129 - 25159046
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
|||||||||||| |||| ||||| ||||| ||| || |||| ||| ||||||||||||||||| |||||||||||| |||| |
|
|
| T |
25159129 |
ttgtttagattctaaccttgtaatttgaatattttttgattttggacgttcatggcatcaaattacaaaatttaaggtattttc |
25159046 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 17582572 - 17582528
Alignment:
| Q |
178 |
ttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
|||| ||||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
17582572 |
ttttggaccttcatagcatcaaattacaaaatttaaggtactttc |
17582528 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 222
Target Start/End: Complemental strand, 30226366 - 30226286
Alignment:
| Q |
142 |
tttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||||||||| | ||||| |||||||||||| |||| |||||||||| || ||||||| ||||||| ||||||||| |
|
|
| T |
30226366 |
tttagattccatcattgtaatttgaagattctttgattttggaccttcatgacaacaaattacaaaatttatggtactttc |
30226286 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 52; Significance: 6e-21; HSPs: 13)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 139 - 222
Target Start/End: Complemental strand, 23289150 - 23289067
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| || | ||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
23289150 |
ttgtttagattccaaccctgtaatttgaagattttttaactttggaccttcatggcatcaaattacaaaatttaaggtactttc |
23289067 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 222
Target Start/End: Complemental strand, 9235587 - 9235504
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||| || |||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
9235587 |
ttgtttagatttcaaccctgtaatttgaagattttttgattttggaccttcatggcatcaaattacaaaatttaaggtactttc |
9235504 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 11908468 - 11908547
Alignment:
| Q |
142 |
tttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtacttt |
221 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||| |||| |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
11908468 |
tttagattccaaccatgtaatttgaagattctatggtttaggaccttcatggcatcaaatttcaaaatttaaggtacttt |
11908547 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 220
Target Start/End: Original strand, 28786365 - 28786447
Alignment:
| Q |
138 |
tttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactt |
220 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| || |||| ||||||||||||||||| || || |||||||||||| |
|
|
| T |
28786365 |
tttgtttagattccaaccctgtaactagaagattatttgattttggaccttcatggcatcaattttcaaactttaaggtactt |
28786447 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 13373240 - 13373318
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggta |
217 |
Q |
| |
|
||||||| ||| |||| |||||| |||||||||||| ||||| |||||| ||||||||||||| |||||||||||| |
|
|
| T |
13373240 |
ttgtttatatttcaactctgtaatttgaagattctttggttttgaaccttcctggcatcaaattacaaaatttaaggta |
13373318 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 8980802 - 8980741
Alignment:
| Q |
157 |
tgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtac |
218 |
Q |
| |
|
||||| |||||||||||| |||||| |||||||||| |||||||||| ||||||| ||||| |
|
|
| T |
8980802 |
tgtaatttgaagattctttagttttggaccttcatgacatcaaattacaaaatttatggtac |
8980741 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 14529693 - 14529737
Alignment:
| Q |
142 |
tttagattccaaccctgtaacttgaagattcttcagttttagacc |
186 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
14529693 |
tttagattccaaccctgtaatttgaagattctttcgttttagacc |
14529737 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 14698292 - 14698250
Alignment:
| Q |
178 |
ttttagaccttcatggcatcaaattatgaaatttaaggtacttt |
221 |
Q |
| |
|
|||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
14698292 |
ttttagaccttcatggcatc-aattataaaatttaaggtacttt |
14698250 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 221
Target Start/End: Complemental strand, 39274207 - 39274133
Alignment:
| Q |
147 |
attccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtacttt |
221 |
Q |
| |
|
||||||||| ||||| || || ||||||| |||||||||||| |||||||||||| || ||| |||||||||| |
|
|
| T |
39274207 |
attccaaccttgtaatttaaatattcttctcttttagaccttcgtggcatcaaattttgggattaaaggtacttt |
39274133 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 13980076 - 13980023
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatg |
192 |
Q |
| |
|
|||||||||||| |||||||||| |||||||||||| |||| |||||||||| |
|
|
| T |
13980076 |
ttgtttagattctaaccctgtaatttgaagattctttgattttggaccttcatg |
13980023 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 24375791 - 24375836
Alignment:
| Q |
177 |
gttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||| ||||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
24375791 |
gttttggaccttcatggcatcaaattacaaaatttatggtactttc |
24375836 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 23245792 - 23245708
Alignment:
| Q |
138 |
tttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||||| ||| ||||||||||| ||||||||| || |||| ||||| ||||||| ||||| | ||||||||||||||||| |
|
|
| T |
23245792 |
tttgtttctatttcaaccctgtaatttgaagattttttgattttggacctatatggcattaaattttaaaatttaaggtactttc |
23245708 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 24754627 - 24754663
Alignment:
| Q |
138 |
tttgtttagattccaaccctgtaacttgaagattctt |
174 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
24754627 |
tttgtttagattccaaccatgtaatttgaagattctt |
24754663 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 52; Significance: 6e-21; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 139 - 222
Target Start/End: Original strand, 9780392 - 9780475
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| |||| ||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
9780392 |
ttgtttagattccaaccctgtaatttgaagattctttgattttcgacctacatggcatcaaattaaaaaatttaaggtactttc |
9780475 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 221
Target Start/End: Original strand, 49277726 - 49277809
Alignment:
| Q |
138 |
tttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtacttt |
221 |
Q |
| |
|
|||||||||||||||||| ||||| ||||| ||| || ||||| ||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
49277726 |
tttgtttagattccaaccgtgtaatttgaaaattatttggttttggaccttcatggcatcaaattacaaaatttaaggtacttt |
49277809 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 221
Target Start/End: Original strand, 13555603 - 13555747
Alignment:
| Q |
77 |
gttaatacatgtttatcccctgtaatattatcgatttccgatttacctctctatnnnnnnntttgtttagattccaaccctgtaacttgaagattcttca |
176 |
Q |
| |
|
||||||| ||||||| || ||||||||||| ||||||||| |||||| || || |||| ||||||| ||||||||||| ||||||||| || |
|
|
| T |
13555603 |
gttaatatatgtttaccctctgtaatattagcgatttccggtttacccctgta-aaaaaaatttggttagatttcaaccctgtaatttgaagattttttt |
13555701 |
T |
 |
| Q |
177 |
g-ttttagaccttcatggcatcaaattatgaaatttaaggtacttt |
221 |
Q |
| |
|
| |||| |||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
13555702 |
gattttggaccttcatgacatcaaattataaaatttaaggtacttt |
13555747 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 5283900 - 5283820
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtact |
219 |
Q |
| |
|
||||||||||||||| ||||||| ||||||||| || |||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
5283900 |
ttgtttagattccaatcctgtaatttgaagattttttgattttgaaccttcatggcatcaaattaaaaaatttaaggtact |
5283820 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 222
Target Start/End: Complemental strand, 8810178 - 8810095
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||| ||||| ||||| ||||| ||||||||| || |||| |||||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
8810178 |
ttgttaagatttcaaccttgtaatttgaagatttttttattttggaccttcatgacatcaaattataaaatttaaggtactttc |
8810095 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 222
Target Start/End: Complemental strand, 16734350 - 16734268
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||||||||| ||||| ||||| |||||||||||| ||||||||||||||||||| |||||| |||||||||||| |||| |
|
|
| T |
16734350 |
ttgtttagatttcaacc-tgtaatttgaagattctttgattttagaccttcatggcataaaattacaaaatttaaggtattttc |
16734268 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 222
Target Start/End: Original strand, 8678889 - 8678973
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcag-ttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
|||||||||||| |||| ||||| ||||||||| || |||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
8678889 |
ttgtttagattcaaaccttgtaatttgaagattttttttattttggaccttcatggcatcaaattacaaaatttaaggtactttc |
8678973 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 9780326 - 9780372
Alignment:
| Q |
77 |
gttaatacatgtttatcccctgtaatattatcgatttccgatttacc |
123 |
Q |
| |
|
||||||| ||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
9780326 |
gttaatatatgtttatcccatgtaatattaacgatttccgatttacc |
9780372 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 16875937 - 16876015
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggta |
217 |
Q |
| |
|
||||||||||| ||||| |||| |||||||||||| |||| |||||| |||||||||||||| |||||||||||| |
|
|
| T |
16875937 |
ttgtttagattacaaccttgtagtttgaagattctttgattttcgacctttatggcatcaaattacaaaatttaaggta |
16876015 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 16734144 - 16734197
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatg |
192 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |||||||| ||||||| |
|
|
| T |
16734144 |
ttgtttagattccaaccctgtaatttgaagattctatggttttagagcttcatg |
16734197 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 29700563 - 29700616
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatg |
192 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||| | |||| |||||||||| |
|
|
| T |
29700563 |
ttgtttagattccaaccctgttatttgaagattctttaatttttgaccttcatg |
29700616 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 42161509 - 42161433
Alignment:
| Q |
146 |
gattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
|||||||| ||||||| |||||||| || | |||| |||||| | |||||||||||| ||||||||||||||||| |
|
|
| T |
42161509 |
gattccaatcctgtaatttgaagatcttttaattttggaccttgaaggcatcaaattacaaaatttaaggtactttc |
42161433 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 23091928 - 23091876
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcat |
191 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||| || |||||| |||||||| |
|
|
| T |
23091928 |
ttgtttagattccaaccttgtaatttgaagattttttagttttgaaccttcat |
23091876 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 222
Target Start/End: Original strand, 11478051 - 11478135
Alignment:
| Q |
138 |
tttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
|||||||||||| ||||||||||| ||||| |||||| ||||| ||||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
11478051 |
tttgtttagatttcaaccctgtaatttgaaaattctttggttttggaccttcatagcatcaaattacaaaatttaaggtactttc |
11478135 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 222
Target Start/End: Complemental strand, 42223325 - 42223242
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| || |||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
42223325 |
ttgtttagattccaaccctgtaatttgaagattttttgattttgaaccttcatggcatcaaattacaaaatttaaggtactttc |
42223242 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 222
Target Start/End: Complemental strand, 16590716 - 16590633
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||||| ||| ||| ||||||| ||||||||| || ||||| |||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
16590716 |
ttgtttatatttcaaacctgtaatttgaagattatttggttttggaccttcatgacatcaaattacaaaatttaaggtactttc |
16590633 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 222
Target Start/End: Complemental strand, 35791264 - 35791181
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||||||||| |||| |||||| || ||||||||| ||||| ||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
35791264 |
ttgtttagatttcaactctgtaatttaaagattctttgattttaaaccttcatgccatcaaattacaaaatttaaggtactttc |
35791181 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 222
Target Start/End: Complemental strand, 31989604 - 31989539
Alignment:
| Q |
157 |
tgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||| |||||||||||| ||||| ||||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
31989604 |
tgtaatttgaagattctttggttttggaccttcatggcatcaaattacaaaatttatggtactttc |
31989539 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 222
Target Start/End: Complemental strand, 41906289 - 41906206
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||||| ||| ||||| ||||| ||||||||| || |||| |||||| |||||||||||||| |||||| |||||||||| |
|
|
| T |
41906289 |
ttgtttaaatttcaaccttgtaatttgaagatttttttattttggacctttatggcatcaaattacaaaattttaggtactttc |
41906206 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 31396692 - 31396738
Alignment:
| Q |
142 |
tttagattccaaccctgtaacttgaagattcttcagttttagacctt |
188 |
Q |
| |
|
|||||||||||||||||||| || |||||||||| |||||| ||||| |
|
|
| T |
31396692 |
tttagattccaaccctgtaatttaaagattcttcggttttaaacctt |
31396738 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 222
Target Start/End: Original strand, 41567314 - 41567398
Alignment:
| Q |
138 |
tttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
|||||||||||| ||||| ||||| ||||| ||| ||| |||| || ||| |||| |||||||| ||||||||||||||||| |
|
|
| T |
41567314 |
tttgtttagatttcaaccttgtaatttgaaaattattcgattttggatctttatggtatcaaatttcaaaatttaaggtactttc |
41567398 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Original strand, 41905992 - 41906028
Alignment:
| Q |
77 |
gttaatacatgtttatcccctgtaatattatcgattt |
113 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
41905992 |
gttaatacatgtttaccccctgtaatattagcgattt |
41906028 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 33198591 - 33198671
Alignment:
| Q |
142 |
tttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||||||||| |||| ||| |||||||||||| ||||||||| ||||||||||||||||| |||||||||| |||||| |
|
|
| T |
33198591 |
tttagattccatccctataatttgaagattctttggttttagacattcatggcatcaaattacaaaatttaaggcactttc |
33198671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 222
Target Start/End: Original strand, 3816551 - 3816634
Alignment:
| Q |
138 |
tttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
|||||||||||||||||| | ||| || ||||||||| ||||| | ||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
3816551 |
tttgtttagattccaacc-tataatttaaagattctttggttttgaatcttcatggcatcaaattataaaatttaaggtactttc |
3816634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 222
Target Start/End: Complemental strand, 9044699 - 9044616
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||||| ||||||||| ||||| ||||||||| || |||| |||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
9044699 |
ttgtttaaattccaaccttgtaatttgaagattatttgattttggaccttcatggcatcaaattatataatttaagatactttc |
9044616 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 222
Target Start/End: Complemental strand, 25167150 - 25167070
Alignment:
| Q |
142 |
tttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||||||||||| ||||| ||||||||| || |||| || |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
25167150 |
tttagattccaactgtgtaatttgaagattatttgattttggatcttcatggcatcaaattacaaaatttaaggtactttc |
25167070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 3816756 - 3816702
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatgg |
193 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||||| ||||| ||||||||||| |
|
|
| T |
3816756 |
ttgtttagatttcaaccctgtaatttgaagattctttggtttttgaccttcatgg |
3816702 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 33200127 - 33200081
Alignment:
| Q |
77 |
gttaatacatgtttatcccctgtaatattatcgatttccgatttacc |
123 |
Q |
| |
|
||||||||||||||| ||| |||||||||| |||||||| ||||||| |
|
|
| T |
33200127 |
gttaatacatgtttaccccatgtaatattagcgatttccaatttacc |
33200081 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 172
Target Start/End: Original strand, 20757498 - 20757531
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattc |
172 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| |
|
|
| T |
20757498 |
ttgtttagattccaaccctgtaatttgaagattc |
20757531 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 221
Target Start/End: Original strand, 21144023 - 21144105
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtacttt |
221 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| || |||| ||||||||||||||||||||| |||||| | ||||||| |
|
|
| T |
21144023 |
ttgtttagattccaaccctgtaatttgaagattttttgattttggaccttcatggcatcaaattacaaaatttgatgtacttt |
21144105 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 37869611 - 37869528
Alignment:
| Q |
139 |
ttgtttagatt-ccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtacttt |
221 |
Q |
| |
|
||||||||||| |||||| ||||| |||||||||||| |||| |||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
37869611 |
ttgtttagatttccaaccttgtaatttgaagattctttgattttggaccttcatgtcatcaaattacaaaatttaaggtacttt |
37869528 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 222
Target Start/End: Original strand, 13153539 - 13153682
Alignment:
| Q |
78 |
ttaatacatgtttatcccctgtaatattatcgatttccgatttacctctctatnnnnnnntttgtttagattccaaccctgtaacttgaaga-ttcttca |
176 |
Q |
| |
|
|||||| || |||| ||||| |||||||| ||||||||| ||||| ||||| | |||||||||||||||||| ||||| ||||||| ||||| | |
|
|
| T |
13153539 |
ttaatatatatttaccccct-taatattagcgatttccggtttacatctctgtaaaaaaatttgtttagattccaaccttgtaatttgaagatttcttta |
13153637 |
T |
 |
| Q |
177 |
gttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
|||| ||||||||| |||||||| || ||||||| ||||||||| |
|
|
| T |
13153638 |
-ttttggaccttcatagcatcaaaatacaaaatttacggtactttc |
13153682 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 20355314 - 20355234
Alignment:
| Q |
139 |
ttgtttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtact |
219 |
Q |
| |
|
||||||||||||||| ||||||| ||||||||| || |||| ||||| |||||||||||||| |||||||||||||| |
|
|
| T |
20355314 |
ttgtttagattccaatcctgtaatttgaagattttttgattttgaaccttgatggcatcaaattaaaaaatttaaggtact |
20355234 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 174
Target Start/End: Complemental strand, 7216608 - 7216575
Alignment:
| Q |
141 |
gtttagattccaaccctgtaacttgaagattctt |
174 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
7216608 |
gtttagattccaaccctgtaatttgaagattctt |
7216575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 20628041 - 20628106
Alignment:
| Q |
157 |
tgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||| ||||| |||||| ||||| ||||||| ||||||||||||| ||||||| ||||||||| |
|
|
| T |
20628041 |
tgtaatttgaaaattctttggttttggaccttcttggcatcaaattacaaaatttatggtactttc |
20628106 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 42779063 - 42779019
Alignment:
| Q |
178 |
ttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
|||| |||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
42779063 |
ttttggaccttcatgacatcaaattacaaaatttaaggtactttc |
42779019 |
T |
 |
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Target: scaffold0188 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0188
Description:
Target: scaffold0188; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 13385 - 13300
Alignment:
| Q |
138 |
tttgtttagattccaaccctgtaacttgaagattcttcag-ttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||| || | |||| |||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
13385 |
tttgtttagattccaaccttgtaatttgaagatttttttgattttggaccttcatgacatcaaattacaaaatttaaggtactttc |
13300 |
T |
 |
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Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 222
Target Start/End: Complemental strand, 306759 - 306694
Alignment:
| Q |
157 |
tgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
||||| |||||||||||| ||||| ||||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
306759 |
tgtaatttgaagattctttggttttggaccttcatggcatcaaattacaaaatttatggtactttc |
306694 |
T |
 |
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Target: scaffold0067 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0067
Description:
Target: scaffold0067; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 222
Target Start/End: Complemental strand, 25976 - 25897
Alignment:
| Q |
142 |
tttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
|||||||||||||||| ||| |||||| || || |||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
25976 |
tttagattccaaccct-taatttgaaggttttttgattttggaccttcatggcatcaaattacaaaatttaaggtactttc |
25897 |
T |
 |
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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 222
Target Start/End: Complemental strand, 82444 - 82364
Alignment:
| Q |
142 |
tttagattccaaccctgtaacttgaagattcttcagttttagaccttcatggcatcaaattatgaaatttaaggtactttc |
222 |
Q |
| |
|
|||||||| ||||||| ||| || |||||| || |||| |||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
82444 |
tttagatttcaaccctttaatttaaagattgtttgattttggaccttcatgatatcaaattacaaaatttaaggtactttc |
82364 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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