View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11225_high_17 (Length: 361)

Name: NF11225_high_17
Description: NF11225
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11225_high_17
NF11225_high_17
[»] chr3 (75 HSPs)
chr3 (1-217)||(11439629-11439845)
chr3 (283-345)||(15543108-15543170)
chr3 (283-345)||(49002378-49002440)
chr3 (283-339)||(29434410-29434466)
chr3 (283-338)||(2862851-2862906)
chr3 (283-338)||(11221142-11221197)
chr3 (283-345)||(11989624-11989686)
chr3 (283-345)||(20209293-20209355)
chr3 (283-345)||(21017064-21017126)
chr3 (283-345)||(44664730-44664792)
chr3 (283-345)||(46292691-46292753)
chr3 (286-345)||(11439912-11439971)
chr3 (283-338)||(13997067-13997122)
chr3 (283-338)||(15020382-15020437)
chr3 (283-338)||(25061450-25061505)
chr3 (286-345)||(28843844-28843903)
chr3 (283-338)||(35747801-35747856)
chr3 (283-338)||(39778429-39778484)
chr3 (283-338)||(44920007-44920062)
chr3 (283-338)||(45214527-45214582)
chr3 (283-338)||(45539982-45540037)
chr3 (1-101)||(11318053-11318156)
chr3 (287-344)||(44036799-44036856)
chr3 (283-338)||(6954106-6954161)
chr3 (283-338)||(44976903-44976958)
chr3 (283-338)||(45171728-45171783)
chr3 (286-345)||(45567551-45567610)
chr3 (283-338)||(50710812-50710867)
chr3 (283-338)||(50711018-50711073)
chr3 (283-345)||(43378273-43378335)
chr3 (286-338)||(18678063-18678115)
chr3 (283-338)||(2773306-2773361)
chr3 (283-338)||(14201905-14201960)
chr3 (283-338)||(18168863-18168918)
chr3 (287-338)||(27812717-27812768)
chr3 (283-338)||(38675131-38675186)
chr3 (286-339)||(40612379-40612432)
chr3 (287-338)||(31574403-31574454)
chr3 (287-345)||(14463265-14463324)
chr3 (283-338)||(41943985-41944040)
chr3 (175-217)||(14202066-14202108)
chr3 (175-217)||(14626131-14626173)
chr3 (6-88)||(15460286-15460368)
chr3 (175-217)||(18169024-18169066)
chr3 (288-338)||(18461734-18461784)
chr3 (175-217)||(35415512-35415554)
chr3 (176-217)||(12123497-12123538)
chr3 (176-217)||(27812841-27812882)
chr3 (176-217)||(28843732-28843773)
chr3 (157-217)||(25061548-25061608)
chr3 (283-319)||(36546212-36546248)
chr3 (283-319)||(36562066-36562102)
chr3 (290-338)||(53712401-53712449)
chr3 (175-210)||(44919899-44919934)
chr3 (170-217)||(45214373-45214420)
chr3 (175-210)||(53712524-53712559)
chr3 (286-344)||(2397898-2397956)
chr3 (283-333)||(8084776-8084826)
chr3 (175-217)||(13996924-13996966)
chr3 (170-216)||(13997188-13997234)
chr3 (175-217)||(14463393-14463435)
chr3 (175-217)||(18677915-18677957)
chr3 (175-217)||(20209152-20209194)
chr3 (176-210)||(44920175-44920209)
chr3 (175-217)||(50710894-50710936)
chr3 (175-217)||(50711126-50711168)
chr3 (175-217)||(50711265-50711307)
chr3 (175-216)||(6954268-6954309)
chr3 (175-216)||(28844003-28844044)
chr3 (175-216)||(31574524-31574565)
chr3 (175-216)||(36546104-36546145)
chr3 (175-216)||(36562169-36562210)
chr3 (175-216)||(44664623-44664664)
chr3 (173-217)||(45171851-45171895)
chr3 (175-207)||(48738310-48738342)
[»] scaffold0119 (2 HSPs)
scaffold0119 (283-345)||(41388-41450)
scaffold0119 (176-217)||(41549-41590)
[»] chr8 (53 HSPs)
chr8 (283-345)||(33279079-33279141)
chr8 (283-345)||(42684897-42684959)
chr8 (283-338)||(39198726-39198781)
chr8 (283-345)||(29596545-29596607)
chr8 (287-345)||(41617183-41617241)
chr8 (2-102)||(27504220-27504320)
chr8 (283-338)||(148402-148457)
chr8 (283-338)||(8156858-8156913)
chr8 (283-338)||(17494832-17494887)
chr8 (286-345)||(18805888-18805947)
chr8 (283-338)||(34198944-34198999)
chr8 (283-338)||(40277331-40277386)
chr8 (283-345)||(36556678-36556740)
chr8 (283-338)||(27712914-27712969)
chr8 (283-338)||(28828325-28828380)
chr8 (283-338)||(30253735-30253790)
chr8 (299-345)||(29726652-29726698)
chr8 (17-102)||(27499615-27499700)
chr8 (283-336)||(30464066-30464119)
chr8 (283-338)||(21660836-21660891)
chr8 (283-338)||(26938295-26938350)
chr8 (283-338)||(33527049-33527104)
chr8 (283-338)||(34632375-34632430)
chr8 (175-217)||(33526942-33526984)
chr8 (175-217)||(41617050-41617092)
chr8 (283-338)||(1235734-1235789)
chr8 (166-217)||(36556805-36556856)
chr8 (283-338)||(37727349-37727404)
chr8 (283-317)||(12649589-12649623)
chr8 (176-217)||(148535-148576)
chr8 (296-345)||(10925224-10925273)
chr8 (175-216)||(33278937-33278978)
chr8 (176-217)||(34632495-34632536)
chr8 (283-344)||(43497316-43497377)
chr8 (169-217)||(18929698-18929746)
chr8 (295-339)||(26187277-26187321)
chr8 (51-102)||(27543992-27544046)
chr8 (283-338)||(4968119-4968174)
chr8 (283-338)||(9887285-9887340)
chr8 (287-338)||(18929850-18929900)
chr8 (286-345)||(24419585-24419644)
chr8 (166-217)||(39198608-39198659)
chr8 (175-209)||(10925105-10925139)
chr8 (175-217)||(18805748-18805790)
chr8 (175-217)||(18929968-18930010)
chr8 (175-217)||(21660728-21660770)
chr8 (175-217)||(27713034-27713076)
chr8 (175-217)||(29596404-29596446)
chr8 (175-217)||(30253628-30253670)
chr8 (175-217)||(33279208-33279250)
chr8 (283-345)||(38229753-38229815)
chr8 (171-217)||(41617310-41617356)
chr8 (175-217)||(42684789-42684831)
[»] chr7 (77 HSPs)
chr7 (283-345)||(8805853-8805915)
chr7 (283-345)||(8949401-8949463)
chr7 (283-345)||(31813873-31813935)
chr7 (283-345)||(45055431-45055493)
chr7 (283-338)||(12423995-12424050)
chr7 (283-338)||(17173198-17173253)
chr7 (283-338)||(20121355-20121410)
chr7 (283-338)||(24331488-24331543)
chr7 (283-338)||(41857250-41857305)
chr7 (283-338)||(42391405-42391460)
chr7 (283-338)||(44457893-44457948)
chr7 (287-345)||(7149404-7149462)
chr7 (283-345)||(41922391-41922453)
chr7 (283-345)||(45867588-45867650)
chr7 (283-345)||(46738407-46738469)
chr7 (283-345)||(49114414-49114476)
chr7 (283-339)||(11338041-11338097)
chr7 (283-338)||(2699767-2699822)
chr7 (283-338)||(19104423-19104478)
chr7 (290-345)||(34287659-34287714)
chr7 (283-338)||(41749730-41749785)
chr7 (283-338)||(43575212-43575267)
chr7 (283-345)||(31115941-31116003)
chr7 (287-336)||(21455667-21455716)
chr7 (283-338)||(7173081-7173136)
chr7 (283-338)||(23036797-23036852)
chr7 (287-338)||(31283267-31283318)
chr7 (283-338)||(38495064-38495119)
chr7 (283-338)||(45062212-45062267)
chr7 (287-345)||(49023721-49023779)
chr7 (290-337)||(21627084-21627131)
chr7 (286-345)||(46426804-46426863)
chr7 (283-338)||(47221857-47221912)
chr7 (287-336)||(11682074-11682123)
chr7 (287-338)||(16860983-16861034)
chr7 (287-338)||(19124981-19125032)
chr7 (283-338)||(21733177-21733232)
chr7 (175-217)||(7149561-7149603)
chr7 (176-217)||(8949562-8949603)
chr7 (168-217)||(21555886-21555935)
chr7 (283-344)||(43268073-43268134)
chr7 (170-217)||(24331376-24331423)
chr7 (170-217)||(47221704-47221751)
chr7 (176-214)||(2699619-2699657)
chr7 (175-217)||(49023579-49023621)
chr7 (176-217)||(2699887-2699928)
chr7 (176-217)||(8805747-8805788)
chr7 (175-216)||(21733339-21733380)
chr7 (175-216)||(31813989-31814030)
chr7 (168-217)||(45055592-45055641)
chr7 (176-216)||(11338163-11338203)
chr7 (175-214)||(24331653-24331692)
chr7 (166-217)||(29099444-29099495)
chr7 (285-344)||(48766002-48766061)
chr7 (175-217)||(12423847-12423889)
chr7 (175-217)||(17173090-17173132)
chr7 (175-217)||(38495184-38495226)
chr7 (175-217)||(41922284-41922326)
chr7 (175-217)||(42391298-42391340)
chr7 (175-217)||(43575064-43575106)
chr7 (175-217)||(44458054-44458096)
chr7 (175-217)||(45062332-45062374)
chr7 (176-217)||(7149294-7149335)
chr7 (175-216)||(8522326-8522367)
chr7 (176-217)||(8806014-8806055)
chr7 (176-217)||(12424116-12424157)
chr7 (283-336)||(14792935-14792988)
chr7 (283-336)||(15239925-15239978)
chr7 (175-216)||(31115839-31115880)
chr7 (283-344)||(32064499-32064560)
chr7 (175-216)||(34287788-34287829)
chr7 (175-216)||(43575321-43575362)
chr7 (176-217)||(43699925-43699966)
chr7 (175-216)||(45055324-45055365)
chr7 (176-216)||(8522583-8522623)
chr7 (175-215)||(16861141-16861181)
chr7 (177-217)||(46738268-46738308)
[»] chr6 (54 HSPs)
chr6 (283-345)||(685062-685124)
chr6 (283-345)||(24325101-24325163)
chr6 (283-339)||(22568912-22568968)
chr6 (286-345)||(9899338-9899397)
chr6 (283-338)||(20027923-20027978)
chr6 (283-345)||(9220246-9220308)
chr6 (283-345)||(9546520-9546582)
chr6 (283-345)||(13853251-13853313)
chr6 (283-345)||(17853752-17853814)
chr6 (283-338)||(3105713-3105768)
chr6 (283-338)||(8129683-8129738)
chr6 (283-338)||(8487971-8488026)
chr6 (283-338)||(13178332-13178387)
chr6 (287-345)||(25121610-25121668)
chr6 (286-345)||(1925259-1925318)
chr6 (283-338)||(2316639-2316694)
chr6 (283-338)||(2882992-2883047)
chr6 (283-345)||(21926173-21926235)
chr6 (283-336)||(3012022-3012075)
chr6 (290-338)||(28852338-28852386)
chr6 (283-338)||(2863689-2863744)
chr6 (285-338)||(12240630-12240684)
chr6 (283-339)||(25026084-25026140)
chr6 (283-338)||(24896281-24896336)
chr6 (168-217)||(17853913-17853962)
chr6 (176-215)||(3105607-3105646)
chr6 (176-217)||(685223-685264)
chr6 (176-216)||(684956-684996)
chr6 (170-217)||(9899465-9899512)
chr6 (178-217)||(12240751-12240790)
chr6 (283-338)||(14655226-14655281)
chr6 (175-217)||(1925421-1925463)
chr6 (175-217)||(2316759-2316801)
chr6 (175-217)||(2863582-2863624)
chr6 (175-217)||(2882885-2882927)
chr6 (175-217)||(3011914-3011956)
chr6 (175-217)||(9220105-9220147)
chr6 (175-217)||(9546412-9546454)
chr6 (175-217)||(9546681-9546723)
chr6 (175-217)||(9899197-9899239)
chr6 (175-217)||(11361791-11361833)
chr6 (175-217)||(21926066-21926108)
chr6 (175-217)||(21926334-21926375)
chr6 (175-217)||(22568765-22568807)
chr6 (309-338)||(1136879-1136908)
chr6 (176-209)||(8487863-8487896)
chr6 (168-209)||(13178220-13178261)
chr6 (175-216)||(13853144-13853185)
chr6 (176-217)||(20028043-20028084)
chr6 (175-216)||(24335535-24335576)
chr6 (175-216)||(25121528-25121569)
chr6 (283-311)||(11361957-11361985)
chr6 (176-216)||(11362051-11362091)
chr6 (168-216)||(13178494-13178542)
[»] chr5 (70 HSPs)
chr5 (283-345)||(3279331-3279393)
chr5 (283-345)||(13697461-13697523)
chr5 (283-345)||(16736912-16736974)
chr5 (283-345)||(32772134-32772196)
chr5 (283-345)||(40952177-40952239)
chr5 (283-344)||(14871843-14871904)
chr5 (283-338)||(2467209-2467264)
chr5 (283-338)||(7601743-7601798)
chr5 (283-338)||(39589726-39589781)
chr5 (283-345)||(1099035-1099097)
chr5 (287-345)||(2426342-2426400)
chr5 (283-345)||(2961037-2961099)
chr5 (283-345)||(2969505-2969567)
chr5 (283-345)||(13577406-13577468)
chr5 (283-345)||(33429642-33429704)
chr5 (283-344)||(18707379-18707440)
chr5 (283-338)||(7610413-7610468)
chr5 (283-338)||(12854725-12854780)
chr5 (283-338)||(13455785-13455840)
chr5 (283-338)||(24858512-24858567)
chr5 (283-345)||(33381538-33381600)
chr5 (287-338)||(6540135-6540186)
chr5 (290-345)||(37943641-37943696)
chr5 (283-338)||(42610890-42610945)
chr5 (283-345)||(2492807-2492868)
chr5 (283-345)||(3168202-3168264)
chr5 (283-345)||(3974356-3974418)
chr5 (283-336)||(19131022-19131075)
chr5 (283-338)||(1643689-1643744)
chr5 (283-338)||(22621197-22621252)
chr5 (283-334)||(31618321-31618372)
chr5 (283-338)||(37092329-37092384)
chr5 (286-338)||(8357177-8357229)
chr5 (283-338)||(14729596-14729651)
chr5 (283-338)||(19984369-19984424)
chr5 (283-338)||(30129583-30129637)
chr5 (175-216)||(3974215-3974256)
chr5 (283-338)||(5239387-5239442)
chr5 (175-217)||(7610532-7610574)
chr5 (175-209)||(8874346-8874380)
chr5 (175-217)||(31485959-31486001)
chr5 (176-217)||(2426500-2426541)
chr5 (176-217)||(13577268-13577309)
chr5 (168-217)||(40952062-40952111)
chr5 (175-214)||(37943802-37943841)
chr5 (175-217)||(1643541-1643583)
chr5 (175-217)||(2426231-2426273)
chr5 (175-217)||(2467061-2467103)
chr5 (175-217)||(7601595-7601637)
chr5 (175-217)||(7601863-7601905)
chr5 (168-210)||(8357061-8357103)
chr5 (175-217)||(12854576-12854618)
chr5 (283-317)||(12875838-12875872)
chr5 (175-217)||(13455944-13455986)
chr5 (175-217)||(14871736-14871778)
chr5 (286-344)||(15858118-15858176)
chr5 (175-217)||(16736803-16736845)
chr5 (283-333)||(17539523-17539573)
chr5 (175-217)||(19131140-19131182)
chr5 (175-217)||(24858405-24858447)
chr5 (175-217)||(33381431-33381473)
chr5 (175-217)||(33429803-33429845)
chr5 (175-217)||(39589617-39589659)
chr5 (175-216)||(2467330-2467371)
chr5 (176-217)||(14872005-14872046)
chr5 (176-217)||(31618436-31618477)
chr5 (176-216)||(5239281-5239321)
chr5 (170-210)||(6539990-6540030)
chr5 (170-210)||(19984257-19984297)
chr5 (175-207)||(19984542-19984574)
[»] chr4 (81 HSPs)
chr4 (283-345)||(41935602-41935664)
chr4 (283-345)||(46648212-46648274)
chr4 (283-339)||(26842909-26842965)
chr4 (283-338)||(7067392-7067447)
chr4 (283-338)||(16020066-16020121)
chr4 (283-338)||(32922176-32922231)
chr4 (286-345)||(35130908-35130967)
chr4 (286-345)||(45801361-45801420)
chr4 (283-338)||(46689307-46689362)
chr4 (283-338)||(52538029-52538084)
chr4 (283-345)||(25331960-25332022)
chr4 (287-345)||(32188057-32188115)
chr4 (283-344)||(44835117-44835178)
chr4 (286-338)||(41376696-41376748)
chr4 (283-338)||(17362448-17362503)
chr4 (283-338)||(52654082-52654137)
chr4 (283-345)||(26886753-26886815)
chr4 (286-338)||(5748025-5748077)
chr4 (283-339)||(39792066-39792122)
chr4 (283-338)||(18568175-18568230)
chr4 (283-338)||(22539837-22539892)
chr4 (283-338)||(38556051-38556106)
chr4 (283-345)||(10993734-10993796)
chr4 (283-345)||(44551024-44551086)
chr4 (283-345)||(9902796-9902861)
chr4 (283-338)||(15516415-15516469)
chr4 (283-338)||(32488734-32488789)
chr4 (283-338)||(45655843-45655898)
chr4 (283-345)||(16530427-16530489)
chr4 (283-345)||(23572744-23572806)
chr4 (287-345)||(37068757-37068814)
chr4 (290-339)||(46674707-46674756)
chr4 (286-338)||(49387333-49387385)
chr4 (283-338)||(20984064-20984119)
chr4 (283-338)||(24270512-24270567)
chr4 (283-338)||(31857731-31857786)
chr4 (283-344)||(30637055-30637116)
chr4 (176-217)||(41935496-41935537)
chr4 (283-338)||(43264220-43264276)
chr4 (165-217)||(52654202-52654254)
chr4 (283-338)||(36868182-36868237)
chr4 (175-217)||(18568026-18568068)
chr4 (287-345)||(18635983-18636041)
chr4 (175-217)||(38555944-38555986)
chr4 (175-217)||(41944167-41944209)
chr4 (175-217)||(46648293-46648335)
chr4 (176-217)||(26947996-26948037)
chr4 (283-320)||(26948101-26948138)
chr4 (175-216)||(45655695-45655736)
chr4 (169-217)||(7067512-7067560)
chr4 (169-217)||(32922337-32922385)
chr4 (176-216)||(39792190-39792230)
chr4 (176-216)||(53563394-53563434)
chr4 (165-216)||(15516576-15516627)
chr4 (175-217)||(5747877-5747919)
chr4 (175-217)||(9902655-9902697)
chr4 (175-217)||(16019959-16020001)
chr4 (175-217)||(17362300-17362342)
chr4 (175-217)||(20984184-20984226)
chr4 (168-210)||(22539964-22540006)
chr4 (176-214)||(26886613-26886651)
chr4 (175-209)||(26886888-26886922)
chr4 (175-217)||(32922069-32922111)
chr4 (175-217)||(36868034-36868076)
chr4 (168-214)||(36868305-36868351)
chr4 (175-217)||(43264341-43264383)
chr4 (175-217)||(44551185-44551227)
chr4 (175-217)||(52538149-52538191)
chr4 (175-217)||(52653933-52653975)
chr4 (175-216)||(10993627-10993668)
chr4 (175-216)||(16530320-16530361)
chr4 (287-344)||(23962960-23963017)
chr4 (175-216)||(25331817-25331858)
chr4 (175-216)||(26948256-26948297)
chr4 (176-217)||(52537882-52537923)
chr4 (176-216)||(9644755-9644795)
chr4 (170-210)||(10993898-10993938)
chr4 (175-207)||(21475534-21475566)
chr4 (170-210)||(41376581-41376621)
chr4 (175-207)||(44038152-44038184)
chr4 (177-217)||(46689427-46689467)
[»] chr2 (76 HSPs)
chr2 (283-345)||(1270252-1270314)
chr2 (283-345)||(9027134-9027196)
chr2 (283-345)||(11724726-11724788)
chr2 (283-345)||(17549212-17549274)
chr2 (283-345)||(23926534-23926596)
chr2 (283-345)||(26499520-26499582)
chr2 (283-345)||(29175067-29175129)
chr2 (283-345)||(30488189-30488251)
chr2 (283-338)||(341421-341476)
chr2 (283-338)||(44490454-44490509)
chr2 (283-345)||(1650646-1650708)
chr2 (283-345)||(3888980-3889042)
chr2 (283-345)||(9912055-9912117)
chr2 (283-345)||(10192228-10192290)
chr2 (283-345)||(29421836-29421898)
chr2 (283-345)||(31556890-31556952)
chr2 (283-336)||(16350701-16350754)
chr2 (283-336)||(22899128-22899181)
chr2 (283-336)||(35412029-35412082)
chr2 (284-345)||(42030682-42030743)
chr2 (283-338)||(1479177-1479232)
chr2 (283-338)||(22196073-22196128)
chr2 (287-338)||(33274547-33274598)
chr2 (283-338)||(42950669-42950724)
chr2 (283-345)||(20663818-20663880)
chr2 (287-339)||(15461404-15461456)
chr2 (283-338)||(10714158-10714213)
chr2 (283-338)||(11723815-11723870)
chr2 (287-338)||(13421187-13421238)
chr2 (283-336)||(28788976-28789029)
chr2 (286-338)||(11122794-11122846)
chr2 (286-338)||(19079371-19079423)
chr2 (283-338)||(22486145-22486201)
chr2 (283-335)||(38574690-38574742)
chr2 (283-338)||(40657450-40657505)
chr2 (175-217)||(22485996-22486038)
chr2 (283-336)||(2450240-2450293)
chr2 (283-320)||(3322161-3322198)
chr2 (287-338)||(18449469-18449517)
chr2 (170-217)||(29174919-29174966)
chr2 (176-214)||(11724890-11724928)
chr2 (176-210)||(14951704-14951738)
chr2 (171-217)||(20663928-20663974)
chr2 (175-217)||(33274397-33274439)
chr2 (176-217)||(1270112-1270153)
chr2 (168-217)||(11723700-11723749)
chr2 (176-217)||(17549071-17549112)
chr2 (176-217)||(28788870-28788911)
chr2 (175-216)||(29379782-29379823)
chr2 (170-206)||(20663754-20663790)
chr2 (169-217)||(30488350-30488398)
chr2 (176-216)||(42950522-42950562)
chr2 (287-338)||(38574768-38574819)
chr2 (175-217)||(341314-341356)
chr2 (175-217)||(1650773-1650815)
chr2 (175-217)||(2450358-2450400)
chr2 (175-217)||(3888873-3888915)
chr2 (175-217)||(10714278-10714320)
chr2 (175-217)||(15461525-15461567)
chr2 (175-217)||(26499424-26499466)
chr2 (175-217)||(26499681-26499723)
chr2 (175-217)||(28789137-28789179)
chr2 (283-317)||(29154173-29154207)
chr2 (175-217)||(35412147-35412189)
chr2 (175-209)||(38574896-38574930)
chr2 (176-217)||(3889141-3889182)
chr2 (176-217)||(9911912-9911953)
chr2 (175-216)||(10192086-10192127)
chr2 (176-217)||(11122647-11122688)
chr2 (175-216)||(16350589-16350630)
chr2 (169-210)||(16350875-16350916)
chr2 (176-217)||(22196193-22196234)
chr2 (176-217)||(22899289-22899330)
chr2 (175-216)||(29154066-29154107)
chr2 (180-216)||(14121561-14121597)
chr2 (178-210)||(29175201-29175233)
[»] chr1 (86 HSPs)
chr1 (283-345)||(17504152-17504214)
chr1 (283-339)||(10296701-10296757)
chr1 (283-338)||(9877553-9877608)
chr1 (287-345)||(4695079-4695137)
chr1 (283-345)||(12650031-12650093)
chr1 (283-345)||(45286375-45286437)
chr1 (283-345)||(46283545-46283607)
chr1 (283-338)||(8853204-8853259)
chr1 (283-338)||(26095639-26095694)
chr1 (283-338)||(40934568-40934623)
chr1 (283-345)||(1501628-1501690)
chr1 (283-345)||(33471554-33471616)
chr1 (283-345)||(49021809-49021871)
chr1 (283-338)||(3459744-3459799)
chr1 (283-338)||(5586637-5586692)
chr1 (283-338)||(5618180-5618235)
chr1 (283-338)||(27547092-27547147)
chr1 (283-338)||(32694458-32694513)
chr1 (283-338)||(40770290-40770345)
chr1 (286-345)||(43726317-43726376)
chr1 (283-338)||(44344133-44344188)
chr1 (286-345)||(48524603-48524662)
chr1 (283-345)||(8828688-8828750)
chr1 (283-338)||(730908-730963)
chr1 (283-338)||(6488981-6489036)
chr1 (283-338)||(8641054-8641109)
chr1 (283-338)||(25012798-25012853)
chr1 (283-338)||(35521330-35521384)
chr1 (287-338)||(45569154-45569205)
chr1 (283-338)||(50312155-50312210)
chr1 (287-345)||(39672949-39673007)
chr1 (287-345)||(48970843-48970901)
chr1 (287-336)||(16515786-16515835)
chr1 (157-217)||(9877388-9877448)
chr1 (283-338)||(26874336-26874391)
chr1 (283-338)||(34480293-34480348)
chr1 (286-338)||(50208509-50208558)
chr1 (283-344)||(24234646-24234707)
chr1 (176-217)||(40770143-40770184)
chr1 (283-338)||(28554299-28554354)
chr1 (175-217)||(17504313-17504355)
chr1 (159-217)||(28554176-28554234)
chr1 (175-217)||(29716424-29716466)
chr1 (175-217)||(32694578-32694620)
chr1 (296-338)||(45315378-45315420)
chr1 (175-217)||(46283403-46283445)
chr1 (175-217)||(50208626-50208668)
chr1 (175-217)||(50312008-50312050)
chr1 (176-217)||(4694939-4694980)
chr1 (168-217)||(5618066-5618115)
chr1 (175-216)||(7349772-7349813)
chr1 (176-217)||(16515904-16515945)
chr1 (175-216)||(45286234-45286275)
chr1 (167-216)||(48970968-48971017)
chr1 (287-339)||(16087122-16087174)
chr1 (176-216)||(50208361-50208401)
chr1 (283-338)||(27065254-27065309)
chr1 (170-217)||(34480181-34480228)
chr1 (175-217)||(4695206-4695248)
chr1 (175-217)||(5586757-5586799)
chr1 (175-217)||(6488873-6488915)
chr1 (175-217)||(8828850-8828892)
chr1 (175-217)||(8853098-8853140)
chr1 (175-217)||(8853365-8853407)
chr1 (175-217)||(12649924-12649966)
chr1 (175-217)||(17504037-17504079)
chr1 (175-217)||(25012917-25012959)
chr1 (175-217)||(26095760-26095802)
chr1 (175-209)||(27065147-27065181)
chr1 (175-217)||(31289256-31289298)
chr1 (283-317)||(39363920-39363954)
chr1 (175-217)||(39672838-39672880)
chr1 (175-217)||(39673106-39673148)
chr1 (175-217)||(43726215-43726257)
chr1 (175-217)||(45286502-45286544)
chr1 (175-217)||(46283672-46283714)
chr1 (175-216)||(730801-730842)
chr1 (176-217)||(3459906-3459947)
chr1 (176-217)||(8828579-8828620)
chr1 (175-216)||(9877674-9877715)
chr1 (175-216)||(17191200-17191241)
chr1 (176-217)||(33471419-33471460)
chr1 (175-216)||(44344025-44344066)
chr1 (175-215)||(3973475-3973515)
chr1 (176-216)||(40770411-40770451)
chr1 (176-216)||(40934689-40934729)
[»] scaffold0009 (1 HSPs)
scaffold0009 (283-338)||(258905-258960)
[»] scaffold0200 (1 HSPs)
scaffold0200 (283-345)||(4471-4533)
[»] scaffold0005 (1 HSPs)
scaffold0005 (283-338)||(257842-257897)
[»] scaffold0592 (2 HSPs)
scaffold0592 (283-345)||(8531-8593)
scaffold0592 (175-217)||(8658-8700)
[»] scaffold0024 (1 HSPs)
scaffold0024 (287-344)||(108000-108057)
[»] scaffold0029 (1 HSPs)
scaffold0029 (283-338)||(73523-73578)
[»] scaffold0077 (1 HSPs)
scaffold0077 (283-345)||(10028-10090)
[»] scaffold0003 (3 HSPs)
scaffold0003 (283-325)||(323576-323618)
scaffold0003 (175-217)||(323424-323466)
scaffold0003 (176-217)||(323682-323723)
[»] scaffold0019 (1 HSPs)
scaffold0019 (292-345)||(45013-45065)
[»] scaffold0071 (1 HSPs)
scaffold0071 (6-88)||(1824-1906)


Alignment Details
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 11439629 - 11439845
Alignment:
Q  1 tctaatggtaaggtttgtatcaactccttgcattctttgcctaactcatcttcttgcaagtattttggcacaagagagttttcatcacctaattttgcca 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11439629 tctaatggtaaggtttgtattaactccttgcattctttgcctaactcatcttcttgcaagtattttggcacaagagagttttcatcacctaattttgcca 11439728  T
Q  101 tgtggtaggtggacgagtactaaaggcttcaagtagattcccaagatctatttctatctatatttatatatagccaaaattacatttttagtctcttaac 200  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||   |||||||||||||||||| ||||||    
T  11439729 tgtggtaggtggatgagtagtaaaggcttcaagtagattcccaagatctatatctatctatatttatatatatggaaaattacatttttagtcccttaac 11439828  T
Q  201 ttaatttcagataacag 217  Q
    |||||||||||||||||    
T  11439829 ttaatttcagataacag 11439845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 15543108 - 15543170
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15543108 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 15543170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 49002440 - 49002378
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  49002440 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 49002378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 339
Target Start/End: Original strand, 29434410 - 29434466
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagat 339  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29434410 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagat 29434466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 2862906 - 2862851
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2862906 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 2862851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 11221197 - 11221142
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11221197 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 11221142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 11989624 - 11989686
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11989624 aagcttcaaatataatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 11989686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 20209355 - 20209293
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20209355 aagcttaaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 20209293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 21017126 - 21017064
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  21017126 aagcttcaaatctaatactcttatgcaaacatagacgaggatcatagatttgaagattgaaag 21017064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 44664730 - 44664792
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  44664730 aagcttcaaatctaatattcttatgcaaacatagacgaggatcattgatttgaagattgaaag 44664792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 46292691 - 46292753
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  46292691 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatatatttgaagattgaaag 46292753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 11439912 - 11439971
Alignment:
Q  286 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  11439912 cttcaaatctaatattcttatgcaaacatagacgaagatcatagatttgaagatggaaag 11439971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 13997122 - 13997067
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13997122 aagcttcaaatctaatattcttatgcaaacatagacgaggattatagatttgaaga 13997067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 15020382 - 15020437
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15020382 aagcttcaaatctaatattattatgcaaacatagacgaggatcatagatttgaaga 15020437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 25061505 - 25061450
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25061505 aagcttcaaatctaatattcttatgcaaacatagaggaggatcatagatttgaaga 25061450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 28843844 - 28843903
Alignment:
Q  286 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  28843844 cttcaaatctaatattcttatgcaaacatagatgaggatcatagatttgaagattgaaag 28843903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 35747801 - 35747856
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  35747801 aagcttcaaatcttatattcttatgcaaacatagacgaggatcatagatttgaaga 35747856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 39778484 - 39778429
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39778484 aagcttcaaatctaatattcttatgcaaacaaagacgaggatcatagatttgaaga 39778429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 44920007 - 44920062
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  44920007 aagcttcaaatctaatattcttatgcaaacatagacaaggatcatagatttgaaga 44920062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 45214582 - 45214527
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45214582 aagcttcaaatctaatattcttatgcaaacatagacgagaatcatagatttgaaga 45214527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 45540037 - 45539982
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  45540037 aagcttcaaatctaatatttttatgcaaacatagacgaggatcatagatttgaaga 45539982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 11318053 - 11318156
Alignment:
Q  1 tctaatggtaaggtttgtatcaactccttgcattctttgcctaactcatcttcttgcaagtattttggcacaagagagttttc---atcacctaattttg 97  Q
    |||||||| |||||  ||||||||||||| ||||||| |||||||||| || |||||| ||||||||||||| ||||||||||   ||||| ||||||||    
T  11318053 tctaatggcaaggtgggtatcaactccttacattcttggcctaactcagctgcttgcatgtattttggcacaggagagttttcaggatcacttaattttg 11318152  T
Q  98 ccat 101  Q
    ||||    
T  11318153 ccat 11318156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 287 - 344
Target Start/End: Original strand, 44036799 - 44036856
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaa 344  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  44036799 ttcaaatctaatattcttatgcaaacatagacgagaatcatagatttgaagattgaaa 44036856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 6954106 - 6954161
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  6954106 aagcttcaaatctaatattcttatacaaacatagacaaggatcatagatttgaaga 6954161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 44976958 - 44976903
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  44976958 aagcttcaaatctaatattcttattcaaacatagacgaggatcataaatttgaaga 44976903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 45171783 - 45171728
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  45171783 aagcttcaaatctaatattcttatgcaaaaatagacgaggatcgtagatttgaaga 45171728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 45567610 - 45567551
Alignment:
Q  286 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||    
T  45567610 cttcaaatctaatatttttatgcaaacatagacgagaatcatagatttgaagattgaaag 45567551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 50710812 - 50710867
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  50710812 aagcttcaaatcttatattcttatgcaaacatagacaaggatcatagatttgaaga 50710867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 50711073 - 50711018
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  50711073 aagcttcaaatcttatattcttatgcaaacatagacgatgatcatagatttgaaga 50711018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 43378335 - 43378273
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||    
T  43378335 aagcttcaaatataatattgttatgcaaacatagacgaggatcatatatttgaagattgaaag 43378273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 286 - 338
Target Start/End: Complemental strand, 18678115 - 18678063
Alignment:
Q  286 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  18678115 cttcaaatcttatatttttatgcaaacatagacgaggatcatagatttgaaga 18678063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 2773361 - 2773306
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  2773361 aagcttcaaatcttatattcttatgcaaacatagacgagaatcataaatttgaaga 2773306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 14201905 - 14201960
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||    
T  14201905 aagcttcaaatctaatatttttatgtaaacatagacgatgatcatagatttgaaga 14201960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 18168863 - 18168918
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||    
T  18168863 aagcttcaaatcttatattcttatgcaaacatagacgaagatcatatatttgaaga 18168918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 27812768 - 27812717
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  27812768 ttcaaatctaatattcttatgcaaacatagacgaggatcataaaattgaaga 27812717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 38675186 - 38675131
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||    
T  38675186 aagcttcaaatctaatattcttatacaaacataaacgaggatcatagatttaaaga 38675131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 339
Target Start/End: Original strand, 40612379 - 40612432
Alignment:
Q  286 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagat 339  Q
    |||||||||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  40612379 cttcaaatctaaaattattatgcaaacatagacgatgatcatagatttgaagat 40612432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 31574454 - 31574403
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||||||||    
T  31574454 ttcaaatctaatatttttatgcaaacatagacgctgatcatagatttgaaga 31574403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 14463324 - 14463265
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcataga-tttgaagatagaaag 345  Q
    ||||||| ||||||||||||||||||||||| | |||||||||| ||||||||| |||||    
T  14463324 ttcaaatataatattcttatgcaaacatagatgcggatcatagattttgaagattgaaag 14463265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 41943985 - 41944040
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||  ||||||||||||||||||||||| |||| |||| |||||||||    
T  41943985 aagcttcaaattaaatattcttatgcaaacatagacaaggaacataaatttgaaga 41944040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 14202108 - 14202066
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||||||||||    
T  14202108 caaaattacacttttagtcccttaacttaatttcagataacag 14202066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 14626131 - 14626173
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||||||||| ||||| |||||||||||||||||    
T  14626131 caaaattacatttttagtcccttaatttaatttcagataacag 14626173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 15460368 - 15460286
Alignment:
Q  6 tggtaaggtttgtatcaactccttgcattctttgcctaactcatcttcttgcaagtattttggcacaagagagttttcatcac 88  Q
    ||||||||||||||||||||| |||||||||  |  ||  |||||||||||||||||||| || | | |||||| ||||||||    
T  15460368 tggtaaggtttgtatcaactctttgcattctagggttatgtcatcttcttgcaagtatttaggaaaatgagagtgttcatcac 15460286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 18169066 - 18169024
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||||||||||    
T  18169066 caaaattacacttttagtcccttaacttaatttcagataacag 18169024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 338
Target Start/End: Original strand, 18461734 - 18461784
Alignment:
Q  288 tcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||||||||||||||| |||||||| || ||||||||| ||||    
T  18461734 tcaaatctaatattcttatgcaaatatagacgacgaccatagatttaaaga 18461784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 35415554 - 35415512
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||||||||| |||||||||||||||| ||||||    
T  35415554 caaaattacatttttagtcccttaacttaatttcaggtaacag 35415512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 12123497 - 12123538
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||||| |||||||||||||||||| |||||||    
T  12123497 aaaattacatttttaatctcttaacttaatttcatataacag 12123538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 27812882 - 27812841
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||| |||||||| |||||||||||||||||||||||    
T  27812882 aaaattacacttttagtcccttaacttaatttcagataacag 27812841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 28843732 - 28843773
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||||||||||| ||||| |||||||||||||||||    
T  28843732 aaaattacatttttagtcccttaatttaatttcagataacag 28843773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 25061608 - 25061548
Alignment:
Q  157 tctatatttatatatagccaaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||| | ||| || |||||||||| |||| |||||||||||||||||||| ||||||    
T  25061608 tctatattaaaataaaggcaaaattacacttttggtctcttaacttaatttcaggtaacag 25061548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 319
Target Start/End: Original strand, 36546212 - 36546248
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacg 319  Q
    |||||||||||||||||||||| ||||||||||||||    
T  36546212 aagcttcaaatctaatattcttttgcaaacatagacg 36546248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 319
Target Start/End: Complemental strand, 36562102 - 36562066
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacg 319  Q
    |||||||||||||||||||||| ||||||||||||||    
T  36562102 aagcttcaaatctaatattcttttgcaaacatagacg 36562066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 338
Target Start/End: Complemental strand, 53712449 - 53712401
Alignment:
Q  290 aaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||| || ||||||||||||||| ||||||| |||||||||    
T  53712449 aaatctaatatttttctgcaaacatagacgaagatcataaatttgaaga 53712401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 210
Target Start/End: Original strand, 44919899 - 44919934
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcag 210  Q
    ||||||||||||||||||| ||||||||||||||||    
T  44919899 caaaattacatttttagtcccttaacttaatttcag 44919934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 45214373 - 45214420
Alignment:
Q  170 atagccaaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||| |||||||||| |||||||| |||||||||||||||| ||||||    
T  45214373 atagacaaaattacacttttagtcccttaacttaatttcagttaacag 45214420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 53712559 - 53712524
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcag 210  Q
    ||||||||||||||||||| ||||||||||||||||    
T  53712559 caaaattacatttttagtcacttaacttaatttcag 53712524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 2397898 - 2397956
Alignment:
Q  286 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaa 344  Q
    |||||||||||||||||||||| ||| ||||| || || |||| |||||||||| ||||    
T  2397898 cttcaaatctaatattcttatgtaaatatagatgaagaccataaatttgaagattgaaa 2397956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 333
Target Start/End: Original strand, 8084776 - 8084826
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagattt 333  Q
    ||||||||||||||||||| || |||||||||||| || ||||||| ||||    
T  8084776 aagcttcaaatctaatattgttgtgcaaacatagaagaagatcatatattt 8084826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 13996924 - 13996966
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||||||||| ||||| |||||||||| ||||||    
T  13996924 caaaattacatttttagtcccttaatttaatttcaggtaacag 13996966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 13997234 - 13997188
Alignment:
Q  170 atagccaaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||| ||||||||||||||||||| ||| |||||||||||| |||||    
T  13997234 ataggcaaaattacatttttagtcccttgacttaatttcaggtaaca 13997188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 14463435 - 14463393
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  14463435 caaaattacacttttagtcccttaacttaatttcaggtaacag 14463393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 18677915 - 18677957
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||||||||| ||||| |||||||||| ||||||    
T  18677915 caaaattacatttttagtcccttaatttaatttcaggtaacag 18677957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 20209152 - 20209194
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  20209152 caaaattacacttttagtcccttaacttaatttcaggtaacag 20209194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 44920209 - 44920175
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcag 210  Q
    |||||||||||||||||| ||||||||||||||||    
T  44920209 aaaattacatttttagtcccttaacttaatttcag 44920175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 50710894 - 50710936
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  50710894 caaaattacacttttagtcccttaacttaatttcaggtaacag 50710936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 50711168 - 50711126
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  50711168 caaaattacacttttagtcccttaacttaatttcaggtaacag 50711126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 50711307 - 50711265
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  50711307 caaaattacacttttagtcccttaacttaatttcaggtaacag 50711265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 6954309 - 6954268
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||| |||||||| ||||||||||||| ||||||||    
T  6954309 caaaattacacttttagtcccttaacttaattttagataaca 6954268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 28844044 - 28844003
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||| |||||||| ||||||||||||||||| ||||    
T  28844044 caaaattacacttttagtcccttaacttaatttcagacaaca 28844003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 31574565 - 31574524
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||| |||||||| |||||||||||||||| |||||    
T  31574565 caaaattacacttttagtcccttaacttaatttcaggtaaca 31574524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 36546104 - 36546145
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||||||||||||  ||||||||||||||| |||||    
T  36546104 caaaattacatttttagtcctttaacttaatttcaggtaaca 36546145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 36562210 - 36562169
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||||||||||||  ||||||||||||||| |||||    
T  36562210 caaaattacatttttagtcctttaacttaatttcaggtaaca 36562169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 44664623 - 44664664
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||| |||||||| |||||||||||||||| |||||    
T  44664623 caaaattacacttttagtcccttaacttaatttcaggtaaca 44664664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 45171895 - 45171851
Alignment:
Q  173 gccaaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||||| ||||||||  ||||||||||||||| ||||||    
T  45171895 gccaaaattacacttttagtcatttaacttaatttcaggtaacag 45171851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 48738342 - 48738310
Alignment:
Q  175 caaaattacatttttagtctcttaacttaattt 207  Q
    ||||||||||||||||||| |||||||||||||    
T  48738342 caaaattacatttttagtcccttaacttaattt 48738310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 41388 - 41450
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41388 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 41450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 41590 - 41549
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||||||||||| ||||||||||||||| |||||||    
T  41590 aaaattacatttttagtcccttaacttaatttcacataacag 41549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 6e-25; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 33279141 - 33279079
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33279141 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 33279079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 42684897 - 42684959
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42684897 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 42684959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 39198726 - 39198781
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39198726 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 39198781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 29596607 - 29596545
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  29596607 aagctttaaatctaatattcttatgcaaacatagacgagtatcatagatttgaagattgaaag 29596545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 41617241 - 41617183
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  41617241 ttcaaatctaatattcttatgcaaacatagacgagaatcatagatttgaagattgaaag 41617183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 27504320 - 27504220
Alignment:
Q  2 ctaatggtaaggtttgtatcaactccttgcattctttgcctaactcatcttcttgcaagtattttggcacaagagagttttcatcacctaattttgccat 101  Q
    ||||||| |||||||||||||| |||||||||||||  ||||| |||||||||| |||||||||||||| |  || ||||||||||| | |||||| |||    
T  27504320 ctaatggcaaggtttgtatcaagtccttgcattcttgccctaagtcatcttctttcaagtattttggcagagtagggttttcatcacttgattttgtcat 27504221  T
Q  102 g 102  Q
    |    
T  27504220 g 27504220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 148402 - 148457
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  148402 aagcttcaaatttaatattcttatgcaaacatagatgaggatcatagatttgaaga 148457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 8156913 - 8156858
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  8156913 aagcttcaaatctaatattcttatgcaaacatagaccaggattatagatttgaaga 8156858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 17494832 - 17494887
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17494832 aagctttaaatcttatattcttatgcaaacatagacgaggatcatagatttgaaga 17494887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 18805947 - 18805888
Alignment:
Q  286 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||    
T  18805947 cttcaaatctaatattcttatgcaaacatatacgaggatcatatatttgaagattgaaag 18805888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 34198944 - 34198999
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  34198944 aagcttcaaatttaatattcttatgcaaacatagaagaggatcatagatttgaaga 34198999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 40277331 - 40277386
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  40277331 aagcttcaagtctaatatacttatgcaaacatagacgaggatcatagatttgaaga 40277386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 36556740 - 36556678
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||    
T  36556740 aagcttcaaatctaatattcttatgtaaacatagacgatgatcataaatttgaagattgaaag 36556678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 27712969 - 27712914
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||||||||||    
T  27712969 aagcttcaaattaaatattcttatgcaaacatagacaaggatcatagatttgaaga 27712914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 28828325 - 28828380
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||||||||||    
T  28828325 aagcttcaaattaaatattcttatgcaaacatagacaaggatcatagatttgaaga 28828380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 30253735 - 30253790
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||||||||||    
T  30253735 aagcttcaaattaaatattcttatgcaaacatagacaaggatcatagatttgaaga 30253790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 299 - 345
Target Start/End: Original strand, 29726652 - 29726698
Alignment:
Q  299 attcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  29726652 attcttatgcaaacatagacgaggatcatagatttgaagattgaaag 29726698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 27499615 - 27499700
Alignment:
Q  17 gtatcaactccttgcattctttgcctaactcatcttcttgcaagtattttggcacaagagagttttcatcacctaattttgccatg 102  Q
    ||||||||||||||||||||| || ||| ||||| |||||||||||||| |  |||| |||||||||||||| | ||||| |||||    
T  27499615 gtatcaactccttgcattcttggcttaagtcatcatcttgcaagtatttggctacaaaagagttttcatcacttgattttaccatg 27499700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 30464119 - 30464066
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaa 336  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||||||||    
T  30464119 aagcttcaaattaaatattcttatgcaaacatagacaaggatcatagatttgaa 30464066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 21660836 - 21660891
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||  ||||||||||||||||||||||| | |||||||||||||||||    
T  21660836 aagcttcaaattaaatattcttatgcaaacatagacaaagatcatagatttgaaga 21660891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 26938295 - 26938350
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||||||||||||||| ||||||||||| ||||| |||||||| ||||    
T  26938295 aagcttcaaatctaatattcttatacaaacatagaccaggattatagatttaaaga 26938350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 33527049 - 33527104
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||| |||||| |||||||||||  |||||||||||||||||||||||||||||||    
T  33527049 aagcatcaaatataatattcttaaacaaacatagacgaggatcatagatttgaaga 33527104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 34632430 - 34632375
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||| ||||||| |||||||||||||||| | |||||||||||||||||    
T  34632430 aagcttcaaatttaatatttttatgcaaacatagacaatgatcatagatttgaaga 34632375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 33526942 - 33526984
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  33526942 caaaattacatttttagtcccttaacttaatttcagataacag 33526984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 41617050 - 41617092
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  41617050 caaaattacacttttagtctcttaacttaatttcagataacag 41617092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 1235789 - 1235734
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||  ||||||||||||||||||||||| | ||| |||||||||||||    
T  1235789 aagcttcaaattaaatattcttatgcaaacatagacaaagattatagatttgaaga 1235734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 36556856 - 36556805
Alignment:
Q  166 atatatagccaaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||| ||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  36556856 atatttaggcaaaattacatttttagtcccttaacttaatttcaggtaacag 36556805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 37727404 - 37727349
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||  ||||||||||||||||||||||| |||| |||| |||||||||    
T  37727404 aagcttcaaattaaatattcttatgcaaacatagacaaggaacataaatttgaaga 37727349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 317
Target Start/End: Original strand, 12649589 - 12649623
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacataga 317  Q
    |||||||||||||||||||||||||||||||||||    
T  12649589 aagcttcaaatctaatattcttatgcaaacataga 12649623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 148576 - 148535
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||||||||||| |||||||||||||||| ||||||    
T  148576 aaaattacatttttagtcccttaacttaatttcaggtaacag 148535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 10925224 - 10925273
Alignment:
Q  296 aatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||| || |||||||||||| ||||||| |||||    
T  10925224 aatattcttatgcaaacataaacaaggatcatagatctgaagattgaaag 10925273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 33278937 - 33278978
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||| ||||||||||||||||||||||||| |||||    
T  33278937 caaaattacacttttagtctcttaacttaatttcaggtaaca 33278978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 34632536 - 34632495
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||||||||||| |||||||||||||||| ||||||    
T  34632536 aaaattacatttttagtcccttaacttaatttcaggtaacag 34632495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 43497316 - 43497377
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaa 344  Q
    ||||||||||| | ||||||||||||||||||||| || || |||| |||||||||| ||||    
T  43497316 aagcttcaaatatgatattcttatgcaaacatagatgaagaccataaatttgaagattgaaa 43497377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 18929698 - 18929746
Alignment:
Q  169 tatagccaaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||| ||||||||||  ||||||| |||||||||||||||||||||||    
T  18929698 tataggcaaaattacacatttagtcccttaacttaatttcagataacag 18929746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 26187321 - 26187277
Alignment:
Q  295 taatattcttatgcaaacatagacgaggatcatagatttgaagat 339  Q
    ||||||||||||||||||||||| || || |||||||||||||||    
T  26187321 taatattcttatgcaaacatagaagaagaccatagatttgaagat 26187277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 27544046 - 27543992
Alignment:
Q  51 ttcttgcaagtattttggcacaagagagttttca---tcacctaattttgccatg 102  Q
    |||||||||||||||||||||||| |||||||||   |||| |||||||||||||    
T  27544046 ttcttgcaagtattttggcacaagtgagttttcaacttcacttaattttgccatg 27543992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 4968119 - 4968174
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||| ||||  ||||||||||||||||||||||  | |||||||||||||||||    
T  4968119 aagctttaaattaaatattcttatgcaaacatagataaagatcatagatttgaaga 4968174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 9887340 - 9887285
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||| ||||  ||||||||||||||||||||||  | |||||||||||||||||    
T  9887340 aagctttaaattaaatattcttatgcaaacatagataaagatcatagatttgaaga 9887285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 18929900 - 18929850
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||| |||||||| ||||||||||||| |||||||||||| ||||    
T  18929900 ttcaaatctaa-attcttatacaaacatagacgaagatcatagatttaaaga 18929850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 24419644 - 24419585
Alignment:
Q  286 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||| ||||||||||  | || | ||||||||||||| |||||    
T  24419644 cttcaaatctaatattcttatacaaacatagataaagaccgtagatttgaagattgaaag 24419585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 39198608 - 39198659
Alignment:
Q  166 atatatagccaaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||| || |||||||||| |||||||| |||||||||||||||| ||||||    
T  39198608 atataaaggcaaaattacacttttagtcccttaacttaatttcaggtaacag 39198659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 209
Target Start/End: Original strand, 10925105 - 10925139
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttca 209  Q
    |||||||||||||||||| ||||||||||||||||    
T  10925105 caaaattacatttttagtttcttaacttaatttca 10925139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 18805748 - 18805790
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||||||||  |||||||||||||||| ||||||    
T  18805748 caaaattacatttttagttccttaacttaatttcaggtaacag 18805790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 18930010 - 18929968
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||||||||| ||  ||||||||||||||||||||||    
T  18930010 caaaattacatttttaatcatttaacttaatttcagataacag 18929968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 21660728 - 21660770
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  21660728 caaaattacacttttagtcccttaacttaatttcaggtaacag 21660770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 27713076 - 27713034
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  27713076 caaaattacacttttagtcccttaacttaatttcaggtaacag 27713034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 29596404 - 29596446
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  29596404 caaaattacacttttagtcccttaacttaatttcaggtaacag 29596446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 30253628 - 30253670
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  30253628 caaaattacacttttagtcccttaacttaatttcaggtaacag 30253670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 33279250 - 33279208
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  33279250 caaaattacacttttagtcccttaacttaatttcaggtaacag 33279208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 38229815 - 38229753
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||| ||||||||||||||||| ||||||||||  | || | ||||||||||||| |||||    
T  38229815 aagcttaaaatctaatattcttatacaaacatagataaagaccgtagatttgaagattgaaag 38229753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 41617356 - 41617310
Alignment:
Q  171 tagccaaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||| |||||||||||||||| | |||||||||||||||| ||||||    
T  41617356 tagctaaaattacatttttagccccttaacttaatttcaggtaacag 41617310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 42684789 - 42684831
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  42684789 caaaattacacttttagtcccttaacttaatttcaggtaacag 42684831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 6e-25; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 8805853 - 8805915
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8805853 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 8805915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 8949401 - 8949463
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8949401 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 8949463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 31813935 - 31813873
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31813935 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatcgaaag 31813873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 45055431 - 45055493
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  45055431 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 45055493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 12424050 - 12423995
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12424050 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 12423995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 17173198 - 17173253
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17173198 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 17173253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 20121410 - 20121355
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20121410 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 20121355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 24331488 - 24331543
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24331488 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 24331543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 41857250 - 41857305
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41857250 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 41857305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 42391405 - 42391460
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42391405 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 42391460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 44457893 - 44457948
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44457893 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 44457948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 7149404 - 7149462
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7149404 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 7149462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 41922391 - 41922453
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  41922391 aagcttcaaatctaatattcttatgcaaacatagactaggatcatagatttgaagattgaaag 41922453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 45867650 - 45867588
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  45867650 aagcttcaaatctaatattcttatacaaacatagacgaggatcatagatttgaagattgaaag 45867588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 46738469 - 46738407
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  46738469 aagcttcaaatctaatattcttatgcaaacatagacgatgatcatagatttgaagattgaaag 46738407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 49114476 - 49114414
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  49114476 aagcttcaaatctaacattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 49114414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 283 - 339
Target Start/End: Complemental strand, 11338097 - 11338041
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagat 339  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11338097 aagcttcaaatctaatattcttatgcaaacatagacgatgatcatagatttgaagat 11338041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 2699822 - 2699767
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2699822 aagcttcaaatctaatattcttatgcaaacatagaagaggatcatagatttgaaga 2699767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 19104478 - 19104423
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19104478 aagcttcaaatcttatattcttatgcaaacatagacgaggatcatagatttgaaga 19104423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 290 - 345
Target Start/End: Complemental strand, 34287714 - 34287659
Alignment:
Q  290 aaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34287714 aaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 34287659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 41749785 - 41749730
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41749785 aagcttcaaatctaacattcttatgcaaacatagacgaggatcatagatttgaaga 41749730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 43575267 - 43575212
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  43575267 aagcttcaaatataatattcttatgcaaacatagacgaggatcatagatttgaaga 43575212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 31116003 - 31115941
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  31116003 aagcttcaaatataatattcttatgcaaacatagacgaggatgatagatttgaagattgaaag 31115941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 287 - 336
Target Start/End: Original strand, 21455667 - 21455716
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaa 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21455667 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaa 21455716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 7173136 - 7173081
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  7173136 aagcttcaaatttaatattcttatgcaaacatagacaaggatcatagatttgaaga 7173081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 23036852 - 23036797
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23036852 aagctttaaatctaatattcttatgcaaacataaacgaggatcatagatttgaaga 23036797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 287 - 338
Target Start/End: Original strand, 31283267 - 31283318
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31283267 ttcaaatctaatattcttatgcaaacatagacgaggaacatagatttgaaga 31283318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 38495119 - 38495064
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  38495119 aagcttcaaatctaatattcttatccaaacataaacgaggatcatagatttgaaga 38495064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 45062267 - 45062212
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  45062267 aagcttcaaatctaatattcttatccaaacataaacgaggatcatagatttgaaga 45062212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 49023779 - 49023721
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||    
T  49023779 ttcaaatctaatattcttatgcaaacatagacgatgattatagatttgaagattgaaag 49023721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 290 - 337
Target Start/End: Complemental strand, 21627131 - 21627084
Alignment:
Q  290 aaatctaatattcttatgcaaacatagacgaggatcatagatttgaag 337  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21627131 aaatctaatattcttatgcaaacatagacgatgatcatagatttgaag 21627084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 46426863 - 46426804
Alignment:
Q  286 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||| || |||||    
T  46426863 cttcaaatctaatattcttatgcaaacatagatgaggatcatagttttgaatattgaaag 46426804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 47221912 - 47221857
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||||||||||||||| |||||||||| || |||||||||||||||||    
T  47221912 aagcttcaaatctaatattcttatacaaacatagatgaagatcatagatttgaaga 47221857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 336
Target Start/End: Complemental strand, 11682123 - 11682074
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaa 336  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  11682123 ttcaaatctaatattcttatgcaaacatagatgaggattatagatttgaa 11682074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 338
Target Start/End: Original strand, 16860983 - 16861034
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||||||||||||||||||||||| | |||||||||||| ||||    
T  16860983 ttcaaatctaatattcttatgcaaacatagacaaagatcatagatttaaaga 16861034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 19125032 - 19124981
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||| ||||||||||||| |||||||||||| |||||||||    
T  19125032 ttcaaatctaatatttttatgcaaacataaacgaggatcatatatttgaaga 19124981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 21733177 - 21733232
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||| |||||||||    
T  21733177 aagcttaaaatataatattcttatgcaaacatagacgagaatcatacatttgaaga 21733232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 7149603 - 7149561
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  7149603 caaaattacacttttagtctcttaacttaatttcagataacag 7149561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 8949603 - 8949562
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  8949603 aaaattacatttttagtcccttaacttaatttcagataacag 8949562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 21555886 - 21555935
Alignment:
Q  168 atatagccaaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  21555886 atataggcaaaattacatttttagtcccttaacttaatttcaggtaacag 21555935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 43268134 - 43268073
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaa 344  Q
    |||||| |||||||||||||||||||||| ||||  || |||||||||||||||||| ||||    
T  43268134 aagctttaaatctaatattcttatgcaaatatagttgaagatcatagatttgaagattgaaa 43268073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 24331376 - 24331423
Alignment:
Q  170 atagccaaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  24331376 ataggcaaaattacatttttagtcccttaacttaatttcaggtaacag 24331423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 47221704 - 47221751
Alignment:
Q  170 atagccaaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  47221704 ataggcaaaattacatttttagtcccttaacttaatttcaggtaacag 47221751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 214
Target Start/End: Original strand, 2699619 - 2699657
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataa 214  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  2699619 aaaattacatttttagtcccttaacttaatttcagataa 2699657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 49023579 - 49023621
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||||||||| |||||||||||||||| ||||||    
T  49023579 caaaattacatttttagtcccttaacttaatttcaggtaacag 49023621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 2699928 - 2699887
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||| ||||||||||||||||||||||||| ||||||    
T  2699928 aaaattacacttttagtctcttaacttaatttcaggtaacag 2699887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 8805747 - 8805788
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||||||||||| |||||||||||||||| ||||||    
T  8805747 aaaattacatttttagtcccttaacttaatttcaggtaacag 8805788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 21733380 - 21733339
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    ||||||||||||| |||||||||||||||||||||| |||||    
T  21733380 caaaattacatttatagtctcttaacttaatttcaggtaaca 21733339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 31814030 - 31813989
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||| |||||||| ||||||||||||||||||||||    
T  31814030 caaaattacacttttagtcccttaacttaatttcagataaca 31813989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 45055641 - 45055592
Alignment:
Q  168 atatagccaaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||| |||||||||| |||||||| |||||||||||||||| ||||||    
T  45055641 atataggcaaaattacacttttagtcccttaacttaatttcaggtaacag 45055592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 11338203 - 11338163
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  11338203 aaaattacatttttagtcccttaacttaatttcaggtaaca 11338163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 214
Target Start/End: Complemental strand, 24331692 - 24331653
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataa 214  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  24331692 caaaattacacttttagtcccttaacttaatttcagataa 24331653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 29099495 - 29099444
Alignment:
Q  166 atatatagccaaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||| ||| |||||||||| |||||||| |||||||||||||||| ||||||    
T  29099495 atatttaggcaaaattacacttttagtcccttaacttaatttcaggtaacag 29099444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 344
Target Start/End: Complemental strand, 48766061 - 48766002
Alignment:
Q  285 gcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaa 344  Q
    ||||||||||||||||||||||| ||| ||||| || || |||| |||||||||| ||||    
T  48766061 gcttcaaatctaatattcttatgtaaaaatagatgaagaccataaatttgaagattgaaa 48766002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 12423847 - 12423889
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  12423847 caaaattacacttttagtcccttaacttaatttcaggtaacag 12423889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 17173090 - 17173132
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||| ||| |||||||||||||||||||||||    
T  17173090 caaaattacaatttttgtcccttaacttaatttcagataacag 17173132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 38495226 - 38495184
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  38495226 caaaattacacttttagtcccttaacttaatttcaggtaacag 38495184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 41922284 - 41922326
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  41922284 caaaattacacttttagtcccttaacttaatttcaggtaacag 41922326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 42391298 - 42391340
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  42391298 caaaattacacttttagtcccttaacttaatttcaggtaacag 42391340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 43575064 - 43575106
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||    
T  43575064 caaaattacatttatagtcccttaacttaatttcaggtaacag 43575106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 44458096 - 44458054
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  44458096 caaaattacacttttagtcccttaacttaatttcaggtaacag 44458054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 45062374 - 45062332
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  45062374 caaaattacacttttagtcccttaacttaatttcaggtaacag 45062332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 7149294 - 7149335
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||| |||||||| |||||||||||||||| ||||||    
T  7149294 aaaattacacttttagtcccttaacttaatttcaggtaacag 7149335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 8522326 - 8522367
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||| |||||||| |||||||||||||||| |||||    
T  8522326 caaaattacacttttagtcccttaacttaatttcaggtaaca 8522367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 8806055 - 8806014
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||| |||||||| |||||||||||||||| ||||||    
T  8806055 aaaattacacttttagtcccttaacttaatttcaggtaacag 8806014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 12424157 - 12424116
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||| |||||||| |||||||||||||||| ||||||    
T  12424157 aaaattacacttttagtcccttaacttaatttcaggtaacag 12424116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 14792988 - 14792935
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaa 336  Q
    |||||||||| |||||||| ||||||||||||||| || ||||| | |||||||    
T  14792988 aagcttcaaaactaatatttttatgcaaacatagatgatgatcaaaaatttgaa 14792935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 15239978 - 15239925
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaa 336  Q
    |||||||||| |||||||| ||||||||||||||| || ||||| | |||||||    
T  15239978 aagcttcaaaactaatatttttatgcaaacatagatgatgatcaaaaatttgaa 15239925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 31115839 - 31115880
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||| |||||||| |||||||||||||||| |||||    
T  31115839 caaaattacacttttagtcccttaacttaatttcaggtaaca 31115880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 32064499 - 32064560
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaa 344  Q
    ||||||| ||||||||||||||||| ||||||||| ||  | |||| |||||||||| ||||    
T  32064499 aagcttccaatctaatattcttatgtaaacatagatgaaaaccataaatttgaagattgaaa 32064560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 34287829 - 34287788
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||| |||||||| |||||||||||||||| |||||    
T  34287829 caaaattacaattttagtcccttaacttaatttcaggtaaca 34287788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 43575362 - 43575321
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||| |||||||| |||||||||||||||| |||||    
T  43575362 caaaattacacttttagtcccttaacttaatttcaggtaaca 43575321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 43699925 - 43699966
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||| |||||||| ||||||||||||| |||||||||    
T  43699925 aaaattacacttttagtcccttaacttaattttagataacag 43699966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 45055324 - 45055365
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||| |||||||| |||||||||||||||| |||||    
T  45055324 caaaattacacttttagtcccttaacttaatttcaggtaaca 45055365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 8522623 - 8522583
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    ||||||||| |||||||| |||||||||||||||| |||||    
T  8522623 aaaattacacttttagtcccttaacttaatttcaggtaaca 8522583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 16861181 - 16861141
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataac 215  Q
    |||||||||||||||||||  |||||||||||| |||||||    
T  16861181 caaaattacatttttagtccattaacttaattttagataac 16861141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 46738268 - 46738308
Alignment:
Q  177 aaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||||||||||  ||||||||||||||| ||||||    
T  46738268 aaattacatttttagtcctttaacttaatttcaggtaacag 46738308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 6e-25; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 685062 - 685124
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  685062 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 685124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 24325101 - 24325163
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24325101 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttaaagatagaaag 24325163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 339
Target Start/End: Complemental strand, 22568968 - 22568912
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagat 339  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22568968 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagat 22568912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 9899397 - 9899338
Alignment:
Q  286 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9899397 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 9899338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 20027978 - 20027923
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20027978 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 20027923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 9220308 - 9220246
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  9220308 aagcttcaaatctaatactcttatgcaaacatagacgaggatcatagatttgaagattgaaag 9220246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 9546520 - 9546582
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  9546520 aagcttcaaatctaatattcttatgcaaacatagacgagaatcatagatttgaagattgaaag 9546582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 13853251 - 13853313
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  13853251 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatatatttgaagattgaaag 13853313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 17853752 - 17853814
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  17853752 aagcttcaaatctaatattcatatgcaaacatagacgaggatcatagatttgaagattgaaag 17853814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 3105713 - 3105768
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3105713 aagcttcaaatctaacattcttatgcaaacatagacgaggatcatagatttgaaga 3105768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 8129738 - 8129683
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8129738 aagcttcaaatctaatattcttatgcaaacatagacgagaatcatagatttgaaga 8129683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 8487971 - 8488026
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8487971 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatatatttgaaga 8488026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 13178332 - 13178387
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13178332 aagcttcaaatctaatattcttatgcaaacatagacgatgatcatagatttgaaga 13178387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 25121610 - 25121668
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  25121610 ttcaaatctaatattcttatgcaaacatagacgatgatcatagatttgaagattgaaag 25121668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 1925318 - 1925259
Alignment:
Q  286 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||    
T  1925318 cttcaaatctaacattcttatgcaaaaatagacgaggatcatagatttgaagattgaaag 1925259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 2316694 - 2316639
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  2316694 aagcttcaaatctaatattcttatgcaaacatagaagaggataatagatttgaaga 2316639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 2882992 - 2883047
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  2882992 aagcttcaaatctaatattcttatccaaacataaacgaggatcatagatttgaaga 2883047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 21926173 - 21926235
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||| | |||||| |||||||||||||| |||||    
T  21926173 aagcttcaaatctaatattcttatgcaaacataaatgaggataatagatttgaagattgaaag 21926235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 3012022 - 3012075
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaa 336  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  3012022 aagcttcaaatctaatattcttatgcaaacatagatgaagatcatagatttgaa 3012075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 290 - 338
Target Start/End: Complemental strand, 28852386 - 28852338
Alignment:
Q  290 aaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28852386 aaatctaatatttttatgcaaacatagacgaggatcatagatttgaaga 28852338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 2863689 - 2863744
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||    
T  2863689 aagcttcaaatctaatattattatccaaacataaacgaggatcatagatttgaaga 2863744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 285 - 338
Target Start/End: Complemental strand, 12240684 - 12240630
Alignment:
Q  285 gcttcaaatctaatattcttatgcaaacatagacgagga-tcatagatttgaaga 338  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  12240684 gcttcaaatctaatattcttatgtaaacatagacgaggattcatagatttgaaga 12240630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 283 - 339
Target Start/End: Original strand, 25026084 - 25026140
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagat 339  Q
    |||||||||||||||||||  |||||||||||||||||||||| || ||||||||||    
T  25026084 aagcttcaaatctaatatttatatgcaaacatagacgaggatcctatatttgaagat 25026140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 24896281 - 24896336
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||| ||||||||||||||||||||| || | |||||||||||||||||    
T  24896281 aagcttcaaatttaatattcttatgcaaacataaacaaagatcatagatttgaaga 24896336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 17853962 - 17853913
Alignment:
Q  168 atatagccaaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||| |||||||||| |||||||| |||||||||||||||||||||||    
T  17853962 atataggcaaaattacacttttagtcccttaacttaatttcagataacag 17853913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 215
Target Start/End: Original strand, 3105607 - 3105646
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataac 215  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  3105607 aaaattacatttttagtctcttaacttaatttcaggtaac 3105646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 685264 - 685223
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||| ||||||||||||||||||||||||| ||||||    
T  685264 aaaattacacttttagtctcttaacttaatttcaggtaacag 685223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 684956 - 684996
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    ||||||||| |||||||| ||||||||||||||||||||||    
T  684956 aaaattacacttttagtcccttaacttaatttcagataaca 684996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 9899512 - 9899465
Alignment:
Q  170 atagccaaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||| |||||||||| |||||||| |||||||||||||||| ||||||    
T  9899512 ataggcaaaattacacttttagtcccttaacttaatttcaggtaacag 9899465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 12240790 - 12240751
Alignment:
Q  178 aattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||| ||||||||||||||||||||||||| ||||||    
T  12240790 aattacacttttagtctcttaacttaatttcaggtaacag 12240751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 14655281 - 14655226
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||  ||||||||||||||||||||||| ||||  ||| |||||||||    
T  14655281 aagcttcaaattaaatattcttatgcaaacatagacaaggaatataaatttgaaga 14655226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 1925463 - 1925421
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  1925463 caaaattacacttttagtcccttaacttaatttcaggtaacag 1925421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 2316801 - 2316759
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  2316801 caaaattacacttttagtcccttaacttaatttcaggtaacag 2316759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 2863582 - 2863624
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  2863582 caaaattacaattttagtcccttaacttaatttcaggtaacag 2863624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 2882885 - 2882927
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  2882885 caaaattacaattttagtcccttaacttaatttcaggtaacag 2882927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 3011914 - 3011956
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||| | ||||||||||||||||||||||||| ||||||    
T  3011914 caaaattatacttttagtctcttaacttaatttcaggtaacag 3011956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 9220105 - 9220147
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  9220105 caaaattacacttttagtcccttaacttaatttcaggtaacag 9220147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 9546412 - 9546454
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  9546412 caaaattacaattttagtcccttaacttaatttcaggtaacag 9546454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 9546723 - 9546681
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  9546723 caaaattacacttttagtcccttaacttaatttcaggtaacag 9546681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 9899197 - 9899239
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  9899197 caaaattacacttttagtcccttaacttaatttcaggtaacag 9899239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 11361791 - 11361833
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||||||||| |||||||||| ||||||    
T  11361791 caaaattacacttttagtctcttaatttaatttcaggtaacag 11361833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 21926066 - 21926108
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  21926066 caaaattacacttttagtcccttaacttaatttcaggtaacag 21926108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 21926375 - 21926334
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||||||||||||| ||||||||||||||| ||||||    
T  21926375 caaaattacatttttagtct-ttaacttaatttcaggtaacag 21926334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 22568765 - 22568807
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||    
T  22568765 caaaattacttttttagtcccttaacttaatttcaggtaacag 22568807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 338
Target Start/End: Original strand, 1136879 - 1136908
Alignment:
Q  309 aaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||    
T  1136879 aaacatagacgaggatcatagatttgaaga 1136908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 209
Target Start/End: Original strand, 8487863 - 8487896
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttca 209  Q
    |||||||||||||||||| |||||||||||||||    
T  8487863 aaaattacatttttagtcccttaacttaatttca 8487896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 13178220 - 13178261
Alignment:
Q  168 atatagccaaaattacatttttagtctcttaacttaatttca 209  Q
    |||||| |||||||||| ||||||||| ||||||||||||||    
T  13178220 atataggcaaaattacacttttagtcttttaacttaatttca 13178261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 13853144 - 13853185
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||| |||||||||| |||||||||||||||| |||||    
T  13853144 caaaattatatttttagtcccttaacttaatttcaggtaaca 13853185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 20028084 - 20028043
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||  ||||||||||||||||||||||||| ||||||    
T  20028084 aaaattacgcttttagtctcttaacttaatttcaggtaacag 20028043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 24335535 - 24335576
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||| |||||||||||||| |||||||||| |||||    
T  24335535 caaaattacacttttagtctcttaatttaatttcaggtaaca 24335576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 25121528 - 25121569
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    ||||||||||  |||||||||||||||||||||||| |||||    
T  25121528 caaaattacacgtttagtctcttaacttaatttcaggtaaca 25121569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 311
Target Start/End: Complemental strand, 11361985 - 11361957
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaa 311  Q
    |||||||||||||||||||||||||||||    
T  11361985 aagcttcaaatctaatattcttatgcaaa 11361957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 11362091 - 11362051
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    ||||||||| |||| ||| ||||||||||||||||||||||    
T  11362091 aaaattacacttttcgtcccttaacttaatttcagataaca 11362051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 13178542 - 13178494
Alignment:
Q  168 atatagccaaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||| |||||||||| |||||||| ||||||||||||| || |||||    
T  13178542 atataggcaaaattacagttttagtcccttaacttaattttaggtaaca 13178494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 6e-25; HSPs: 70)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 3279393 - 3279331
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3279393 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 3279331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 13697523 - 13697461
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13697523 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 13697461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 16736912 - 16736974
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16736912 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 16736974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 32772196 - 32772134
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  32772196 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 32772134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 40952177 - 40952239
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40952177 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 40952239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 14871843 - 14871904
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14871843 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaa 14871904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 2467264 - 2467209
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2467264 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 2467209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 7601798 - 7601743
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7601798 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 7601743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 39589781 - 39589726
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39589781 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 39589726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 1099097 - 1099035
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  1099097 aagcttcaaatctaatattcttatgcaaacatagacgaggatcataaatttgaagattgaaag 1099035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 2426342 - 2426400
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2426342 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 2426400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 2961099 - 2961037
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  2961099 aagcttcaaatctaatattcttatgcaaacatagacgatgatcatagatttgaagatcgaaag 2961037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 2969567 - 2969505
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  2969567 aagcttcaaatctaatattcttatgcaaacatagacgatgatcatagatttgaagatcgaaag 2969505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 13577468 - 13577406
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  13577468 aagcttcaaatctaatattcttatgcaaacatagacgaagatcatagatttgaagattgaaag 13577406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 33429642 - 33429704
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  33429642 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatatatttgaagattgaaag 33429704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 18707379 - 18707440
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaa 344  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  18707379 aagcttcaaatctaatattcttatgcaaacatagacgaggatcataaatttgaagattgaaa 18707440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 7610468 - 7610413
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  7610468 aagcttcaaatcttatattcttatgcaaacatagacgaggatcatagatttgaaga 7610413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 12854780 - 12854725
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12854780 aagctttaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 12854725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 13455785 - 13455840
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13455785 aagcttcaaatctaatattctaatgcaaacatagacgaggatcatagatttgaaga 13455840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 24858512 - 24858567
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24858512 aagcttcaaatcttatattcttatgcaaacatagacgaggatcatagatttgaaga 24858567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 33381538 - 33381600
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  33381538 aagcttcaaatctaatattcttatgcaaaaatagacgaggatcataaatttgaagattgaaag 33381600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 6540186 - 6540135
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6540186 ttcaaatctaatattcttatccaaacatagacgaggatcatagatttgaaga 6540135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 290 - 345
Target Start/End: Original strand, 37943641 - 37943696
Alignment:
Q  290 aaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  37943641 aaatctaatatttttatgcaaacatagacgaggatcatagatttgaagattgaaag 37943696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 42610890 - 42610945
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  42610890 aagcttcaaatctaatattcttatgcaaacatagacgagaattatagatttgaaga 42610945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 2492868 - 2492807
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||    
T  2492868 aagcttcaaatctaatattcttatgtaaacatagacga-gatcatagatttgaagattgaaag 2492807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 3168202 - 3168264
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| | |||||||| |||||    
T  3168202 aagcttcaaatataatattcttatgcaaacatagacgaggatcatataattgaagattgaaag 3168264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 3974418 - 3974356
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||    
T  3974418 aagctttaaatctactatttttatgcaaacatagacgaggatcatagatttgaagattgaaag 3974356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 19131075 - 19131022
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaa 336  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  19131075 aagcttcaaatctaatattcttatccaaacataaacgaggatcatagatttgaa 19131022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 1643744 - 1643689
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||    
T  1643744 aagcttcaaatttaataatcttatgcaaacatagaagaggatcatagatttgaaga 1643689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 22621252 - 22621197
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||    
T  22621252 aagcttcaaatctaatattattatgcaaacatagatgaggatcataaatttgaaga 22621197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 334
Target Start/End: Complemental strand, 31618372 - 31618321
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttg 334  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  31618372 aagcttcaaatctaatattcttatgcaaacatagacgaagattatagatttg 31618321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 37092384 - 37092329
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||||||||||    
T  37092384 aagcttcaaattaaatattcttatgcaaacatagacaaggatcatagatttgaaga 37092329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 286 - 338
Target Start/End: Original strand, 8357177 - 8357229
Alignment:
Q  286 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||  ||||||||||||||||||||||| |||||||||||||||||||    
T  8357177 cttcaaattaaatattcttatgcaaacatagacaaggatcatagatttgaaga 8357229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 14729651 - 14729596
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||||| ||||    
T  14729651 aagcttcaaattaaatattcttatgcaaacatagacaaggatcatagatttaaaga 14729596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 19984369 - 19984424
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||| ||||||||| ||  ||||||||||||||||    
T  19984369 aagcttcaaatctaatattcttatgaaaacatagaagaatatcatagatttgaaga 19984424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 30129583 - 30129637
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||    
T  30129583 aagcttcgaatctaatatt-ttatgcaaacatagacaaggatcatagatttgaaga 30129637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 3974215 - 3974256
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  3974215 caaaattacatttttagtttcttaacttaatttcagataaca 3974256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 5239387 - 5239442
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||  ||||||||||||||||||||||| | ||||||| |||||||||    
T  5239387 aagcttcaaattaaatattcttatgcaaacatagacaaagatcataaatttgaaga 5239442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 7610574 - 7610532
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| ||||||||||||||||||||||||| ||||||    
T  7610574 caaaattacacttttagtctcttaacttaatttcaggtaacag 7610532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 209
Target Start/End: Original strand, 8874346 - 8874380
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttca 209  Q
    |||||||||||||||||||||||||||||||||||    
T  8874346 caaaattacatttttagtctcttaacttaatttca 8874380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 31485959 - 31486001
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| ||||||||||||||||||||||||| ||||||    
T  31485959 caaaattacacttttagtctcttaacttaatttcaggtaacag 31486001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 2426541 - 2426500
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||| |||||||| |||||||||||||||||||||||    
T  2426541 aaaattacacttttagtcccttaacttaatttcagataacag 2426500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 13577268 - 13577309
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||||||||||| ||||| |||||||||||||||||    
T  13577268 aaaattacatttttagtcccttaatttaatttcagataacag 13577309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 40952062 - 40952111
Alignment:
Q  168 atatagccaaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||| |||||||||| |||||||| |||||||||||||||| ||||||    
T  40952062 atataggcaaaattacacttttagtcccttaacttaatttcaggtaacag 40952111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 214
Target Start/End: Complemental strand, 37943841 - 37943802
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataa 214  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  37943841 caaaattacacttttagtcccttaacttaatttcagataa 37943802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 1643541 - 1643583
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  1643541 caaaattacacttttagtcccttaacttaatttcaggtaacag 1643583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 2426231 - 2426273
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  2426231 caaaattacacttttagtcccttaacttaatttcaggtaacag 2426273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 2467061 - 2467103
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||||||||| ||||||||||||| || ||||||    
T  2467061 caaaattacatttttagtcccttaacttaattttaggtaacag 2467103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 7601595 - 7601637
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||| |||||||||| |||||||||||||||| ||||||    
T  7601595 caaaattatatttttagtcccttaacttaatttcaggtaacag 7601637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 7601905 - 7601863
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  7601905 caaaattacacttttagtcccttaacttaatttcaggtaacag 7601863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 8357061 - 8357103
Alignment:
Q  168 atatagccaaaattacatttttagtctcttaacttaatttcag 210  Q
    |||||| |||||||| |||||||||| ||||||||||||||||    
T  8357061 atatagacaaaattatatttttagtcccttaacttaatttcag 8357103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 12854576 - 12854618
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||||||||||||  ||||||||||||||| ||||||    
T  12854576 caaaattacatttttagtcctttaacttaatttcaggtaacag 12854618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 317
Target Start/End: Complemental strand, 12875872 - 12875838
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacataga 317  Q
    |||||| ||||||||||||||||||||||||||||    
T  12875872 aagctttaaatctaatattcttatgcaaacataga 12875838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 13455986 - 13455944
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||||||||| ||||||||||||| || ||||||    
T  13455986 caaaattacatttttagtcccttaacttaattttaggtaacag 13455944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 14871736 - 14871778
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  14871736 caaaattacacttttagtcccttaacttaatttcaggtaacag 14871778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 15858118 - 15858176
Alignment:
Q  286 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaa 344  Q
    ||||||||||||||||||||| | ||||||||  | |||||||||||| ||||| ||||    
T  15858118 cttcaaatctaatattcttatacgaacatagataaagatcatagatttaaagattgaaa 15858176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 16736803 - 16736845
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  16736803 caaaattacacttttagtcccttaacttaatttcaggtaacag 16736845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 333
Target Start/End: Original strand, 17539523 - 17539573
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagattt 333  Q
    |||||||||| |||||||| ||||||||||||||| || ||||||| ||||    
T  17539523 aagcttcaaaactaatatttttatgcaaacatagatgatgatcataaattt 17539573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 19131182 - 19131140
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  19131182 caaaattacacttttagtcccttaacttaatttcaggtaacag 19131140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 24858405 - 24858447
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||||||||| ||||||||||||| || ||||||    
T  24858405 caaaattacatttttagtcccttaacttaattttaggtaacag 24858447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 33381431 - 33381473
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||| |||||||||||||| |||||||||||||||| ||||||    
T  33381431 caaagttacatttttagtcccttaacttaatttcaggtaacag 33381473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 33429845 - 33429803
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  33429845 caaaattacacttttagtcccttaacttaatttcaggtaacag 33429803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 39589617 - 39589659
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  39589617 caaaattacacttttagtcccttaacttaatttcaggtaacag 39589659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 2467371 - 2467330
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    ||||||||||||||||||  |||||||||||||||| |||||    
T  2467371 caaaattacatttttagttccttaacttaatttcaggtaaca 2467330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 14872046 - 14872005
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||||| || |||||||||||||||| ||||||    
T  14872046 aaaattacatttttaatcccttaacttaatttcaggtaacag 14872005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 31618477 - 31618436
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||||| || |||||||||| ||||||||||||    
T  31618477 aaaattacatttttaatcccttaacttaaattcagataacag 31618436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 5239281 - 5239321
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    ||||||||||||||||||  ||||||||||| |||||||||    
T  5239281 aaaattacatttttagtcctttaacttaattacagataaca 5239321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 6539990 - 6540030
Alignment:
Q  170 atagccaaaattacatttttagtctcttaacttaatttcag 210  Q
    |||| |||||||||| |||||||| ||||||||||||||||    
T  6539990 ataggcaaaattacacttttagtcccttaacttaatttcag 6540030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 19984257 - 19984297
Alignment:
Q  170 atagccaaaattacatttttagtctcttaacttaatttcag 210  Q
    |||| ||||||||||| ||||||||||||| ||||||||||    
T  19984257 atagacaaaattacatatttagtctcttaatttaatttcag 19984297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 19984574 - 19984542
Alignment:
Q  175 caaaattacatttttagtctcttaacttaattt 207  Q
    ||||||||||||||||||| |||||||||||||    
T  19984574 caaaattacatttttagtcccttaacttaattt 19984542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 6e-25; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 41935602 - 41935664
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41935602 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 41935664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 46648274 - 46648212
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  46648274 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 46648212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 339
Target Start/End: Original strand, 26842909 - 26842965
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagat 339  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26842909 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagat 26842965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 7067447 - 7067392
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7067447 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 7067392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 16020066 - 16020121
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16020066 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 16020121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 32922176 - 32922231
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32922176 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 32922231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 35130908 - 35130967
Alignment:
Q  286 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35130908 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 35130967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 45801420 - 45801361
Alignment:
Q  286 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  45801420 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 45801361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 46689362 - 46689307
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46689362 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 46689307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 52538084 - 52538029
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52538084 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 52538029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 25332022 - 25331960
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  25332022 aagcttcaaatctaatattcttatgcaaacatagacgagggtcatagatttgaagattgaaag 25331960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 32188115 - 32188057
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  32188115 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 32188057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 44835178 - 44835117
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaa 344  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  44835178 aagcttcaaatctaatatttttatgcaaacatagacgaggatcatagatttgaagattgaaa 44835117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 286 - 338
Target Start/End: Original strand, 41376696 - 41376748
Alignment:
Q  286 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41376696 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 41376748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 17362503 - 17362448
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17362503 aagcttcaaatctaatattcttatgcaaacatagacgaggatcataaatttgaaga 17362448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 52654137 - 52654082
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  52654137 aagcttcaaatcttatattcttatgcaaacatagacgaggatcatagatttgaaga 52654082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 26886815 - 26886753
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||    
T  26886815 aagcttcaaatctaatattcttatgtaaacatagatgaggatcatagatttgaagattgaaag 26886753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 286 - 338
Target Start/End: Complemental strand, 5748077 - 5748025
Alignment:
Q  286 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5748077 cttcaaatcttatattcttatgcaaacatagacgaggatcatagatttgaaga 5748025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 283 - 339
Target Start/End: Complemental strand, 39792122 - 39792066
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagat 339  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  39792122 aagcttcaaatctaatatttttatgcaaacatagacgatgatcatagatttgaagat 39792066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 18568230 - 18568175
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  18568230 aagcttcaaatcttatattcttatgcaaacatagacgatgatcatagatttgaaga 18568175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 22539892 - 22539837
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  22539892 aagcttcaaatctaatattcttatgcaaacatagaagaggattatagatttgaaga 22539837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 38556051 - 38556106
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  38556051 aagcttcaaatctaatattattatacaaacatagacgaggatcatagatttgaaga 38556106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 10993734 - 10993796
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||| |||||    
T  10993734 aagcttcaaatataatatttttatgcaaacatagacgaggatcgtagatttgaagattgaaag 10993796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 44551024 - 44551086
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||| |||||    
T  44551024 aagcttcaaatctaatattcttatacaaacatagacgaggatcataaatttgaggattgaaag 44551086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 9902861 - 9902796
Alignment:
Q  283 aagcttcaaatctaatattcttat---gcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||| ||||   ||||||||||||||||||||||||||||||||| |||||    
T  9902861 aagcttcaaatctaatattattattatgcaaacatagacgaggatcatagatttgaagattgaaag 9902796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 15516415 - 15516469
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  15516415 aagcttcaaa-ctaatattctaatgcaaacatagacgaggatcatagatttgaaga 15516469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 32488789 - 32488734
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||||||||||    
T  32488789 aagcttcaaattaaatattcttatgcaaacatagacaaggatcatagatttgaaga 32488734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 45655898 - 45655843
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||    
T  45655898 aagcttcaaatcttatattcttatgcaaacatagacgatgatcataaatttgaaga 45655843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 16530427 - 16530489
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||  |||||||||||| ||||||||||| || |||||    
T  16530427 aagcttcaaatctaatattcttatgcaagtatagacgaggataatagatttgaaaattgaaag 16530489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 23572806 - 23572744
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||| |||||||||| |||||    
T  23572806 aagcttcaaattaaatattcttatgcaaacatagacaaggatcataaatttgaagattgaaag 23572744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 37068814 - 37068757
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||    
T  37068814 ttcaaatctaatattcttatgcaaacatagacg-gaatcatagatttgaagattgaaag 37068757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 290 - 339
Target Start/End: Original strand, 46674707 - 46674756
Alignment:
Q  290 aaatctaatattcttatgcaaacatagacgaggatcatagatttgaagat 339  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  46674707 aaatctaatattcttatacaaacatagacgaggatcgtagatttgaagat 46674756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 286 - 338
Target Start/End: Complemental strand, 49387385 - 49387333
Alignment:
Q  286 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||  |||||||||||||||||| ||||||||||||||||    
T  49387385 cttcaaatctaatattgctatgcaaacatagacgagaatcatagatttgaaga 49387333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 20984119 - 20984064
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||| |||||||||||||||||  ||||| |||||||||||||||||||    
T  20984119 aagcttcaaatttaatattcttatgcaaatttagacaaggatcatagatttgaaga 20984064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 24270567 - 24270512
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||| ||||||||||||||||||||||||||| ||| |||||| |||||||||    
T  24270567 aagcttcgaatctaatattcttatgcaaacatagaagagaatcataaatttgaaga 24270512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 31857786 - 31857731
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||  |||||| |||||||||||||||| |||||||||||||||||||    
T  31857786 aagcttcaaattaaatattattatgcaaacatagacaaggatcatagatttgaaga 31857731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 30637055 - 30637116
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaa 344  Q
    ||||||||||||||||||||||||| |||||||||  | ||||||| |||||||||| ||||    
T  30637055 aagcttcaaatctaatattcttatgtaaacatagataaagatcataaatttgaagattgaaa 30637116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 41935496 - 41935537
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  41935496 aaaattacatttttagtctcttaacttaatttcaggtaacag 41935537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 43264276 - 43264220
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggat-catagatttgaaga 338  Q
    ||||||||||||||||| ||||||||||| ||||||||||||  |||||||||||||    
T  43264276 aagcttcaaatctaatactcttatgcaaatatagacgaggataaatagatttgaaga 43264220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 52654254 - 52654202
Alignment:
Q  165 tatatatagccaaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||| |||||||||| |||||||| |||||||||||||||| ||||||    
T  52654254 tatatataggcaaaattacacttttagtcccttaacttaatttcaggtaacag 52654202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 36868237 - 36868182
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||| ||||||| |||||||||||||  | |||||||||||||||||||    
T  36868237 aagcttcaaatttaatatttttatgcaaacataagcaaggatcatagatttgaaga 36868182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 18568026 - 18568068
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| ||||| ||||||||||||||||||||||||||    
T  18568026 caaaattacacttttaatctcttaacttaatttcagataacag 18568068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 18636041 - 18635983
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||| |||||||||| || || ||| ||||||||||| |||||    
T  18636041 ttcaaatctaatattcttatacaaacatagatgaagaccatggatttgaagattgaaag 18635983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 38555944 - 38555986
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||||||||||    
T  38555944 caaaattacacttttagtcccttaacttaatttcagataacag 38555986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 41944209 - 41944167
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||||||||| |||||||||||||||| ||||||    
T  41944209 caaaattacatttttagtcccttaacttaatttcaggtaacag 41944167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 46648335 - 46648293
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||||||||| |||||||||||||||| ||||||    
T  46648335 caaaattacatttttagtcccttaacttaatttcaggtaacag 46648293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 26947996 - 26948037
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  26947996 aaaattacatttttagtcctttaacttaatttcagataacag 26948037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 320
Target Start/End: Original strand, 26948101 - 26948138
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacga 320  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  26948101 aagcttcaaatataatattcttatgcaaacatagacga 26948138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 45655695 - 45655736
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||| ||||||||||||||||||||||||| |||||    
T  45655695 caaaattacacttttagtctcttaacttaatttcaggtaaca 45655736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 7067560 - 7067512
Alignment:
Q  169 tatagccaaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||| |||||||||| |||||||| |||||||||||||||| ||||||    
T  7067560 tatagacaaaattacacttttagtcccttaacttaatttcaggtaacag 7067512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 32922385 - 32922337
Alignment:
Q  169 tatagccaaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||| |||||||||| |||||||| |||||||||||||||| ||||||    
T  32922385 tataggcaaaattacacttttagtcccttaacttaatttcaggtaacag 32922337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 39792230 - 39792190
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  39792230 aaaattacatttttagtcccttaacttaatttcaggtaaca 39792190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 53563434 - 53563394
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||||||||||| ||||||||||||| ||||||||    
T  53563434 aaaattacatttttagtcccttaacttaattttagataaca 53563394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 15516627 - 15516576
Alignment:
Q  165 tatatatagccaaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    ||||||||| |||||||||| |||| ||| |||||||||||||||| |||||    
T  15516627 tatatataggcaaaattacactttttgtcccttaacttaatttcaggtaaca 15516576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 5747877 - 5747919
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||||||||| ||||| |||||||||| ||||||    
T  5747877 caaaattacatttttagtcccttaatttaatttcaggtaacag 5747919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 9902655 - 9902697
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  9902655 caaaattacacttttagtcccttaacttaatttcaggtaacag 9902697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 16019959 - 16020001
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  16019959 caaaattacacttttagtcccttaacttaatttcaggtaacag 16020001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 17362300 - 17362342
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||| ||||||||    
T  17362300 caaaattacacttttagtcccttaacttaatttcggataacag 17362342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 20984226 - 20984184
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  20984226 caaaattacacttttagtcccttaacttaatttcaggtaacag 20984184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 22540006 - 22539964
Alignment:
Q  168 atatagccaaaattacatttttagtctcttaacttaatttcag 210  Q
    |||||| |||||||||| |||||||| ||||||||||||||||    
T  22540006 atataggcaaaattacacttttagtcccttaacttaatttcag 22539964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 214
Target Start/End: Original strand, 26886613 - 26886651
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataa 214  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  26886613 aaaattatatttttagtcccttaacttaatttcagataa 26886651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 209
Target Start/End: Complemental strand, 26886922 - 26886888
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttca 209  Q
    ||||||||||||||||||| |||||||||||||||    
T  26886922 caaaattacatttttagtcccttaacttaatttca 26886888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 32922069 - 32922111
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  32922069 caaaattacacttttagtcccttaacttaatttcaggtaacag 32922111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 36868034 - 36868076
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||||||||  ||||| |||||||||||||||||    
T  36868034 caaaattacatttttagttccttaatttaatttcagataacag 36868076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 214
Target Start/End: Complemental strand, 36868351 - 36868305
Alignment:
Q  168 atatagccaaaattacatttttagtctcttaacttaatttcagataa 214  Q
    |||||| |||||||| |||||||||  ||||||||||||||||||||    
T  36868351 atataggcaaaattatatttttagttccttaacttaatttcagataa 36868305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 43264383 - 43264341
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||||||||||||  ||||||||||||||| ||||||    
T  43264383 caaaattacatttttagtcctttaacttaatttcaggtaacag 43264341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 44551227 - 44551185
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  44551227 caaaattacacttttagtcccttaacttaatttcaggtaacag 44551185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 52538191 - 52538149
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  52538191 caaaattacacttttagtcccttaacttaatttcaggtaacag 52538149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 52653933 - 52653975
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  52653933 caaaattacacttttagtcccttaacttaatttcaggtaacag 52653975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 10993627 - 10993668
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||| |||||||| |||||||||||||||| |||||    
T  10993627 caaaattacacttttagtcccttaacttaatttcaggtaaca 10993668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 16530320 - 16530361
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||| |||||||| |||||||||||||||| |||||    
T  16530320 caaaattacacttttagtcccttaacttaatttcaggtaaca 16530361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 344
Target Start/End: Original strand, 23962960 - 23963017
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaa 344  Q
    |||| |||||||||| ||||||||||||||| ||  | ||||||||||||||| ||||    
T  23962960 ttcagatctaatattgttatgcaaacatagatgaaaaccatagatttgaagattgaaa 23963017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 25331817 - 25331858
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||| |||||||| |||||||||||||||| |||||    
T  25331817 caaaattacacttttagtcccttaacttaatttcaggtaaca 25331858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 26948297 - 26948256
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||| |||||||||| |||||||||||||||| |||||    
T  26948297 caaaattatatttttagtcccttaacttaatttcaggtaaca 26948256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 52537882 - 52537923
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||| |||||||| |||||||||||||||| ||||||    
T  52537882 aaaattacacttttagtcccttaacttaatttcaggtaacag 52537923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 9644755 - 9644795
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||||||||||| ||||||||||||| || |||||    
T  9644755 aaaattacatttttagtcccttaacttaattttaggtaaca 9644795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 10993938 - 10993898
Alignment:
Q  170 atagccaaaattacatttttagtctcttaacttaatttcag 210  Q
    |||| |||||||||||||||| || ||||||||||||||||    
T  10993938 atagacaaaattacatttttaatcccttaacttaatttcag 10993898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 21475566 - 21475534
Alignment:
Q  175 caaaattacatttttagtctcttaacttaattt 207  Q
    |||||||||||||||||| ||||||||||||||    
T  21475566 caaaattacatttttagtatcttaacttaattt 21475534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 41376581 - 41376621
Alignment:
Q  170 atagccaaaattacatttttagtctcttaacttaatttcag 210  Q
    |||| |||||||||| |||||||| ||||||||||||||||    
T  41376581 ataggcaaaattacacttttagtcccttaacttaatttcag 41376621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 207
Target Start/End: Original strand, 44038152 - 44038184
Alignment:
Q  175 caaaattacatttttagtctcttaacttaattt 207  Q
    |||||| ||||||||||||||||||||||||||    
T  44038152 caaaatcacatttttagtctcttaacttaattt 44038184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 46689467 - 46689427
Alignment:
Q  177 aaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||| ||||||| ||||||||||||||||| ||||||    
T  46689467 aaattacacttttagtttcttaacttaatttcaggtaacag 46689427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 6e-25; HSPs: 76)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 1270314 - 1270252
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1270314 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 1270252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 9027134 - 9027196
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9027134 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 9027196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 11724726 - 11724788
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11724726 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 11724788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 17549274 - 17549212
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17549274 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 17549212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 23926596 - 23926534
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23926596 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 23926534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 26499520 - 26499582
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26499520 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 26499582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 29175129 - 29175067
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  29175129 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 29175067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 30488189 - 30488251
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30488189 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 30488251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 341421 - 341476
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  341421 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 341476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 44490509 - 44490454
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44490509 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 44490454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 1650708 - 1650646
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  1650708 aagcttcaaatctaatattcttatgcaaacatagacgcggatcatagatttgaagattgaaag 1650646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 3888980 - 3889042
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  3888980 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagattggaagatcgaaag 3889042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 9912117 - 9912055
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  9912117 aagcttcaaatctaatattcttatgcaaacatagacgagaatcatagatttgaagattgaaag 9912055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 10192290 - 10192228
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  10192290 aagcttcaaatctaatattcttatgcaaacatagacgaggatcataaatttgaagattgaaag 10192228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 29421898 - 29421836
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  29421898 aagcttcaaatctaatatttttatgcaaacatagacgaggatcatagatttgaagattgaaag 29421836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 31556952 - 31556890
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31556952 aagcttcaaatcaaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 31556890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 16350701 - 16350754
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaa 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16350701 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaa 16350754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 22899128 - 22899181
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaa 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22899128 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaa 22899181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 35412082 - 35412029
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaa 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35412082 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaa 35412029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 284 - 345
Target Start/End: Complemental strand, 42030743 - 42030682
Alignment:
Q  284 agcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  42030743 agcttcaaatctaatattcttatgcaaacatagacgaagatcatagatttgaagattgaaag 42030682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 1479232 - 1479177
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1479232 aagcttcaaatcttatattcttatgcaaacatagacgaggatcatagatttgaaga 1479177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 22196128 - 22196073
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22196128 aagcttcaaatctaatattcttatgcaaacatagacgatgatcatagatttgaaga 22196073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 33274598 - 33274547
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33274598 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 33274547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 42950724 - 42950669
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42950724 aagcttcaaatctaatattcttatgcaaacatagaagaggatcatagatttgaaga 42950669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 20663818 - 20663880
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||    
T  20663818 aagcttcaaatctaatattcttatgcaaacatagacgaggatcataaatttaaagattgaaag 20663880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 339
Target Start/End: Complemental strand, 15461456 - 15461404
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagat 339  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15461456 ttcaaatctaatatttttatgcaaacatagacgaggatcatagatttgaagat 15461404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 10714213 - 10714158
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  10714213 aagcttcaaatttaatattcttatgcaaacatagacaaggatcatagatttgaaga 10714158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 11723815 - 11723870
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  11723815 aagcttcaaatctaatattcttatgcaaatatatacgaggatcatagatttgaaga 11723870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 287 - 338
Target Start/End: Original strand, 13421187 - 13421238
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13421187 ttcaaatctaatattcttatgcaaacataaacgaggatcatagatttgaaga 13421238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 28788976 - 28789029
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaa 336  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  28788976 aagcttcaaatctaatattcttatacaaatatagacgaggatcatagatttgaa 28789029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 286 - 338
Target Start/End: Complemental strand, 11122846 - 11122794
Alignment:
Q  286 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  11122846 cttcaaatcttatatttttatgcaaacatagacgaggatcatagatttgaaga 11122794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 286 - 338
Target Start/End: Original strand, 19079371 - 19079423
Alignment:
Q  286 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  19079371 cttcaaatctaatattcttatacaaacatagatgaggatcatagatttgaaga 19079423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 22486201 - 22486145
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggat-catagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  22486201 aagcttcaaatctaatattcttatgcaaacatagacgaggataaatagatttgaaga 22486145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 283 - 335
Target Start/End: Original strand, 38574690 - 38574742
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttga 335  Q
    ||||||||||||||||||||||||||||| ||||||||  |||||||||||||    
T  38574690 aagcttcaaatctaatattcttatgcaaatatagacgataatcatagatttga 38574742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 40657505 - 40657450
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||| ||||||||||| |||||||||||  |||||||||||||||||||    
T  40657505 aagcttcaaatataatattcttaagcaaacatagataaggatcatagatttgaaga 40657450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 22485996 - 22486038
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  22485996 caaaattacatttttagtctcttaacttaattttagataacag 22486038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 2450293 - 2450240
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaa 336  Q
    |||||||||||  ||||||||||||||||||||||| | |||||||||||||||    
T  2450293 aagcttcaaattaaatattcttatgcaaacatagacaatgatcatagatttgaa 2450240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 320
Target Start/End: Complemental strand, 3322198 - 3322161
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacga 320  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3322198 aagcttcaaatctaatattcttatgcaaacatagacga 3322161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 338
Target Start/End: Original strand, 18449469 - 18449517
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||||||    
T  18449469 ttcaaatctaatattcttatgcaaacatagac---gatcatagatttgaaga 18449517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 29174919 - 29174966
Alignment:
Q  170 atagccaaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  29174919 ataggcaaaattacatttttagtcccttaacttaatttcaggtaacag 29174966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 214
Target Start/End: Complemental strand, 11724928 - 11724890
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataa 214  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  11724928 aaaattacacttttagtctcttaacttaatttcagataa 11724890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 14951704 - 14951738
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcag 210  Q
    |||||||||||||||||||||||||||||||||||    
T  14951704 aaaattacatttttagtctcttaacttaatttcag 14951738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 20663974 - 20663928
Alignment:
Q  171 tagccaaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||||||| |||||||| |||||||||||||||| ||||||    
T  20663974 tagccaaaattacacttttagtcccttaacttaatttcaggtaacag 20663928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 33274397 - 33274439
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||||||||| |||||||||||||||| ||||||    
T  33274397 caaaattacatttttagtcccttaacttaatttcaggtaacag 33274439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 1270112 - 1270153
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||||||||||| ||||||||||||||| |||||||    
T  1270112 aaaattacatttttagtcccttaacttaatttcacataacag 1270153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 11723700 - 11723749
Alignment:
Q  168 atatagccaaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||| ||||||||||||||||||| |||||||| ||||||| ||||||    
T  11723700 atataggcaaaattacatttttagtcccttaactttatttcaggtaacag 11723749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 17549071 - 17549112
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||||||||||| |||||||||||||||| ||||||    
T  17549071 aaaattacatttttagtcccttaacttaatttcaggtaacag 17549112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 28788870 - 28788911
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||| ||||||||||||||||||||||||| ||||||    
T  28788870 aaaattacacttttagtctcttaacttaatttcaggtaacag 28788911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 29379782 - 29379823
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    ||||||||||||||||||||||||| |||||||||| |||||    
T  29379782 caaaattacatttttagtctcttaatttaatttcaggtaaca 29379823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 20663754 - 20663790
Alignment:
Q  170 atagccaaaattacatttttagtctcttaacttaatt 206  Q
    |||| ||||||||||||||||||||||||||||||||    
T  20663754 ataggcaaaattacatttttagtctcttaacttaatt 20663790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 30488398 - 30488350
Alignment:
Q  169 tatagccaaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||| |||||||||| |||||||| |||||||||||||||| ||||||    
T  30488398 tataggcaaaattacacttttagtcccttaacttaatttcaggtaacag 30488350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 42950522 - 42950562
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    ||||||| ||||||| |||||||||||||||||||||||||    
T  42950522 aaaattatatttttaatctcttaacttaatttcagataaca 42950562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 38574819 - 38574768
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||| |||||| ||||||||||||| ||||||||  ||||||||||||||||    
T  38574819 ttcatatctaacattcttatgcaaatatagacgataatcatagatttgaaga 38574768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 341314 - 341356
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  341314 caaaattacagttttagtcccttaacttaatttcaggtaacag 341356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 1650815 - 1650773
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  1650815 caaaattacacttttagtcccttaacttaatttcaggtaacag 1650773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 2450400 - 2450358
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||||||||| ||||| ||||||| |||||||||    
T  2450400 caaaattacatttttagtcccttaatttaattttagataacag 2450358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 3888873 - 3888915
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||| |||||||||| |||||||||||||||| ||||||    
T  3888873 caaaattatatttttagtcccttaacttaatttcaggtaacag 3888915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 10714320 - 10714278
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  10714320 caaaattacacttttagtcccttaacttaatttcaggtaacag 10714278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 15461567 - 15461525
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  15461567 caaaattacacttttagtcccttaacttaatttcaggtaacag 15461525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 26499424 - 26499466
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  26499424 caaaattacacttttagtcccttaacttaatttcaggtaacag 26499466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 26499723 - 26499681
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  26499723 caaaattacacttttagtcccttaacttaatttcaggtaacag 26499681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 28789179 - 28789137
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  28789179 caaaattacacttttagtcccttaacttaatttcaggtaacag 28789137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 317
Target Start/End: Original strand, 29154173 - 29154207
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacataga 317  Q
    ||||||||||||||||||| |||||||||||||||    
T  29154173 aagcttcaaatctaatatttttatgcaaacataga 29154207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 35412189 - 35412147
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  35412189 caaaattacacttttagtcccttaacttaatttcaggtaacag 35412147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 209
Target Start/End: Complemental strand, 38574930 - 38574896
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttca 209  Q
    ||||||||||||||||||| |||||||||||||||    
T  38574930 caaaattacatttttagtcccttaacttaatttca 38574896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 3889182 - 3889141
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||| |||||||| |||||||||||||||| ||||||    
T  3889182 aaaattacacttttagtcccttaacttaatttcaggtaacag 3889141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 9911912 - 9911953
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||| |||||||| |||||||||||||||| ||||||    
T  9911912 aaaattacacttttagtcccttaacttaatttcaggtaacag 9911953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 10192086 - 10192127
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||| |||||||| |||||||||||||||| |||||    
T  10192086 caaaattacacttttagtcccttaacttaatttcaggtaaca 10192127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 11122647 - 11122688
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||| ||||||| ||||||||||||||||||| ||||||    
T  11122647 aaaattatatttttaatctcttaacttaatttcaggtaacag 11122688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 16350589 - 16350630
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||||||||| || |||||||||||||||| |||||    
T  16350589 caaaattacatttttaatcccttaacttaatttcaggtaaca 16350630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 16350916 - 16350875
Alignment:
Q  169 tatagccaaaattacatttttagtctcttaacttaatttcag 210  Q
    ||||| |||||||| ||||||||||| |||||||||||||||    
T  16350916 tataggcaaaattatatttttagtcttttaacttaatttcag 16350875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 22196234 - 22196193
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||| |||||||||||||||||||||||| || ||||||    
T  22196234 aaaattatatttttagtctcttaacttaattttaggtaacag 22196193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 22899330 - 22899289
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||| |||||||||| |||||||||||||||| ||||||    
T  22899330 aaaattatatttttagtcccttaacttaatttcaggtaacag 22899289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 29154066 - 29154107
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||| |||||||| |||||||||||||||| |||||    
T  29154066 caaaattacacttttagtcccttaacttaatttcagttaaca 29154107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 14121561 - 14121597
Alignment:
Q  180 ttacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||| |||||||||||||||| |||||||||||    
T  14121561 ttacatttatagtctcttaacttaacttcagataaca 14121597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 29175233 - 29175201
Alignment:
Q  178 aattacatttttagtctcttaacttaatttcag 210  Q
    |||||||||||||||| ||||||||||||||||    
T  29175233 aattacatttttagtcccttaacttaatttcag 29175201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 6e-25; HSPs: 86)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 17504152 - 17504214
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17504152 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 17504214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 339
Target Start/End: Original strand, 10296701 - 10296757
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagat 339  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10296701 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagat 10296757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 9877608 - 9877553
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9877608 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 9877553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 4695137 - 4695079
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4695137 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagattgaaag 4695079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 12650031 - 12650093
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  12650031 aagcttcaaatctaatattcttatgcaaacataaacgaggatcatagatttgaagattgaaag 12650093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 45286437 - 45286375
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  45286437 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatatatttgaagattgaaag 45286375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 46283607 - 46283545
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  46283607 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaaattgaaag 46283545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 8853204 - 8853259
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8853204 aagcttcaaatctaatattcttatgtaaacatagacgaggatcatagatttgaaga 8853259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 26095694 - 26095639
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26095694 aagcttcaaatctaatattcttatgcaaacatagacgagaatcatagatttgaaga 26095639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 40934623 - 40934568
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40934623 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatctgaaga 40934568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 1501628 - 1501690
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||    
T  1501628 aagcttcaaatctaatattcttatgcaaacatagacgaaaatcatagatttgaagattgaaag 1501690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 33471616 - 33471554
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||    
T  33471616 aagcttcaaatctaatattcttatgcaaacatagacgaggatcataaatttaaagattgaaag 33471554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 49021871 - 49021809
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||    
T  49021871 aagcttcaaatctaatattctaatgcaaatatagacgaggatcatagatttgaagattgaaag 49021809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 3459744 - 3459799
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  3459744 aagcttcaaatctaatattcttatacaaacataaacgaggatcatagatttgaaga 3459799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 5586692 - 5586637
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  5586692 aagcttcaaatttaatattcttatgcaaacatagacaaggatcatagatttgaaga 5586637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 5618180 - 5618235
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  5618180 aagcttcaaatctaatattcttatccaaacataaacgaggatcatagatttgaaga 5618235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 27547147 - 27547092
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  27547147 aagcttcaaattttatattcttatgcaaacatagacgaggatcatagatttgaaga 27547092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 32694513 - 32694458
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  32694513 aagcttcaaatctaatattcttatgcaaacataaacgaggatcataaatttgaaga 32694458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 40770345 - 40770290
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  40770345 aagcttcaaatcttatactcttatgcaaacatagacgaggatcatagatttgaaga 40770290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 43726317 - 43726376
Alignment:
Q  286 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||    
T  43726317 cttcaaatctaatatttttatgcaaacatagacgatgatcatagatttgaagattgaaag 43726376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 44344133 - 44344188
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  44344133 aagcttcaaatcttatattcttatgcaaacatagacgaagatcatagatttgaaga 44344188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 48524603 - 48524662
Alignment:
Q  286 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||    
T  48524603 cttcaaatctaatatttttatgcaaacatagatgaggatcatagatttgaagattgaaag 48524662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 8828688 - 8828750
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||||||| | | |||||||||||||||||| |||||    
T  8828688 aagcttcaaatctaatattcttatgcaaacatagtcaatgatcatagatttgaagattgaaag 8828750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 730908 - 730963
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  730908 aagcttcaaatcttatattcttatacaaacatagacgaggatcataaatttgaaga 730963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 6488981 - 6489036
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||||||||||    
T  6488981 aagcttcaaattaaatattcttatgcaaacatagacaaggatcatagatttgaaga 6489036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 8641054 - 8641109
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||    
T  8641054 aagcttcaaatctaatattcttatgaaaacatagccgatgatcatagatttgaaga 8641109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 25012853 - 25012798
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||    
T  25012853 aagcttcaaatctaatatttttacgcaaacatagacaaggatcatagatttgaaga 25012798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 35521330 - 35521384
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  35521330 aagcttcaaatctaatattcttatgcaaacatagac-aagatcatagatttgaaga 35521384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 45569205 - 45569154
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  45569205 ttcaaatataatattcttatgcaaatatagacgaggatcatagatttgaaga 45569154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 50312210 - 50312155
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||  ||||||||||||||||||| |||||||||||||||||||||||||||    
T  50312210 aagcttcggatctaatattcttatgcaaccatagacgaggatcatagatttgaaga 50312155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 39672949 - 39673007
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||| |||||||||||||||||||||||||  |||||||||| |||||    
T  39672949 ttcaaatctaatatttttatgcaaacatagacgaggatcatgaatttgaagattgaaag 39673007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 48970901 - 48970843
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||| | ||||||| ||||||||||||| |||||    
T  48970901 ttcaaatctaatattcttatgcaaacataaaagaggatcgtagatttgaagatggaaag 48970843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 336
Target Start/End: Complemental strand, 16515835 - 16515786
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaa 336  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  16515835 ttcaaatctaatattcgtatgcaaatatagacgaggatcatagatttgaa 16515786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 9877388 - 9877448
Alignment:
Q  157 tctatatttatatatagccaaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||| | ||| | |||||||||||||||||||||||||||||||||||| ||||||    
T  9877388 tctatatttttttatgggcaaaattacatttttagtctcttaacttaatttcaggtaacag 9877448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 26874336 - 26874391
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||  |||||||||||||||||||| || |||||||||||||||||||    
T  26874336 aagcttcaaattaaatattcttatgcaaacataaacaaggatcatagatttgaaga 26874391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 34480293 - 34480348
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||  |||||||||||||||||||| || |||||||||||||||||||    
T  34480293 aagcttcaaattaaatattcttatgcaaacataaacaaggatcatagatttgaaga 34480348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 338
Target Start/End: Complemental strand, 50208558 - 50208509
Alignment:
Q  286 cttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  50208558 cttcaaatctaatatt---atgcaaacatagacgaggatcatagatttgaaga 50208509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 24234646 - 24234707
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaa 344  Q
    ||||||||||||| ||||||||||||||||||||| || || |||| |||||||||| ||||    
T  24234646 aagcttcaaatcttatattcttatgcaaacatagatgaagaccataaatttgaagattgaaa 24234707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 40770143 - 40770184
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  40770143 aaaattacatttttagtctcttaacttaatttcaggtaacag 40770184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 28554299 - 28554354
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    |||||||||||  |||||||| ||| |||||||||| |||||||||||||||||||    
T  28554299 aagcttcaaattaaatattctcatgtaaacatagacaaggatcatagatttgaaga 28554354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 17504355 - 17504313
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||||||||| |||||||||||||||| ||||||    
T  17504355 caaaattacatttttagtcccttaacttaatttcaggtaacag 17504313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 28554176 - 28554234
Alignment:
Q  159 tatatttatatatagccaaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||| | | |||||||||| |||||||| |||||||||||||||| ||||||    
T  28554176 tatatttatattttggcaaaattacacttttagtcccttaacttaatttcaggtaacag 28554234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 29716466 - 29716424
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||||||||| |||||||||||||||| ||||||    
T  29716466 caaaattacatttttagtcccttaacttaatttcaggtaacag 29716424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 32694620 - 32694578
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  32694620 caaatttacatttttagtctcttaacttaatttcaggtaacag 32694578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 338
Target Start/End: Original strand, 45315378 - 45315420
Alignment:
Q  296 aatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||| | |||||||||||||||||    
T  45315378 aatattcttatgcaaacatagacaaagatcatagatttgaaga 45315420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 46283403 - 46283445
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| ||||| ||||||||||||||||||||||||||    
T  46283403 caaaattacacttttaatctcttaacttaatttcagataacag 46283445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 50208668 - 50208626
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||||||||| || |||||||||||||||||||||||    
T  50208668 caaaattacatttttaatcccttaacttaatttcagataacag 50208626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 50312008 - 50312050
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||||||||||||||||||| |||||||||| ||||||    
T  50312008 caaaattacatttttagtctcttaatttaatttcaggtaacag 50312050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 4694939 - 4694980
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  4694939 aaaattacacttttagtctcttaatttaatttcagataacag 4694980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 5618066 - 5618115
Alignment:
Q  168 atatagccaaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||| |||||||||| |||||||| |||||||||||||||| ||||||    
T  5618066 atataggcaaaattacacttttagtcccttaacttaatttcaggtaacag 5618115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 7349772 - 7349813
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||| |||||||| ||||||||||||||||||||||    
T  7349772 caaaattacacttttagtcccttaacttaatttcagataaca 7349813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 16515945 - 16515904
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||||||||||| |||||||||||||||| ||||||    
T  16515945 aaaattacatttttagtcccttaacttaatttcaggtaacag 16515904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 45286234 - 45286275
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||| ||||||||||||||||||||||||| |||||    
T  45286234 caaaattacacttttagtctcttaacttaatttcaggtaaca 45286275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 48971017 - 48970968
Alignment:
Q  167 tatatagccaaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||  |||||||||||||||||| |||||||||||||||| |||||    
T  48971017 tatataggtaaaattacatttttagtcccttaacttaatttcaggtaaca 48970968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 339
Target Start/End: Complemental strand, 16087174 - 16087122
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagat 339  Q
    |||| |||||||||| ||||||||||||||| || || |||||||||||||||    
T  16087174 ttcagatctaatattattatgcaaacatagatgaagaccatagatttgaagat 16087122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 50208361 - 50208401
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  50208361 aaaaatacacttttagtctcttaacttaatttcagataaca 50208401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 27065254 - 27065309
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||| |||  |  || |||||||||||||    
T  27065254 aagcttcaaatctaatattcttatgcaaacagagaaaattattatagatttgaaga 27065309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 34480181 - 34480228
Alignment:
Q  170 atagccaaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||| |||||||||| |||||||| |||||||||||||||| ||||||    
T  34480181 ataggcaaaattacacttttagtcccttaacttaatttcaggtaacag 34480228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 4695248 - 4695206
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  4695248 caaaattacacttttagtcccttaacttaatttcaggtaacag 4695206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 5586799 - 5586757
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  5586799 caaaattacacttttagtcccttaacttaatttcaggtaacag 5586757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 6488873 - 6488915
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  6488873 caaaattacacttttagtcccttaacttaatttcaggtaacag 6488915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 8828892 - 8828850
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||    
T  8828892 caaaattacactttcagtctcttaacttaatttcaggtaacag 8828850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 8853098 - 8853140
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  8853098 caaaattacacttttagtcccttaacttaatttcaggtaacag 8853140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 8853407 - 8853365
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  8853407 caaaattacacttttagtcccttaacttaatttcaggtaacag 8853365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 12649924 - 12649966
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  12649924 caaaattacacttttagtcccttaacttaatttcaggtaacag 12649966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 17504037 - 17504079
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  17504037 caaaattacacttttagtcccttaacttaatttcaggtaacag 17504079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 25012959 - 25012917
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  25012959 caaaattacacttttagtcccttaacttaatttcaggtaacag 25012917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 26095802 - 26095760
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  26095802 caaaattacacttttagtcccttaacttaatttcaggtaacag 26095760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 209
Target Start/End: Original strand, 27065147 - 27065181
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttca 209  Q
    ||||||||||||||||||| |||||||||||||||    
T  27065147 caaaattacatttttagtcccttaacttaatttca 27065181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 31289256 - 31289298
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  31289256 caaaattacacttttagtcccttaacttaatttcaggtaacag 31289298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 317
Target Start/End: Original strand, 39363920 - 39363954
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacataga 317  Q
    |||| ||||||||||||||||||||||||||||||    
T  39363920 aagcctcaaatctaatattcttatgcaaacataga 39363954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 39672838 - 39672880
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| |||||||||||||||| ||||||    
T  39672838 caaaattacacttttagtcccttaacttaatttcaggtaacag 39672880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 39673148 - 39673106
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| ||||||||||||| |||||||||    
T  39673148 caaaattacacttttagtcccttaacttaattttagataacag 39673106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 43726215 - 43726257
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||  |||||||||||||||||||||||    
T  43726215 caaaattacacttttagttccttaacttaatttcagataacag 43726257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 45286544 - 45286502
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||| |||||||||  |||||||||||||||||||||||    
T  45286544 caaaattatatttttagttccttaacttaatttcagataacag 45286502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 46283714 - 46283672
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| |||||||| ||||| |||||||||||||||||    
T  46283714 caaaattacacttttagtcccttaatttaatttcagataacag 46283672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 730801 - 730842
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||| |||||||| |||||||||||||||| |||||    
T  730801 caaaattacacttttagtcccttaacttaatttcaggtaaca 730842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 3459947 - 3459906
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||| |||||||||| |||||||||||||||| ||||||    
T  3459947 aaaattatatttttagtcccttaacttaatttcaggtaacag 3459906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 8828579 - 8828620
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||| |||||||| |||||||||||||||| ||||||    
T  8828579 aaaattacacttttagtcccttaacttaatttcaggtaacag 8828620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 9877715 - 9877674
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||| |||||||||| |||||||||||||||| |||||    
T  9877715 caaaattatatttttagtcccttaacttaatttcaggtaaca 9877674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 17191200 - 17191241
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||| |||||||| |||||||||||||||| |||||    
T  17191200 caaaattacacttttagtcccttaacttaatttcaggtaaca 17191241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 33471419 - 33471460
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||||| |||||||| |||||||||||||||| ||||||    
T  33471419 aaaattacacttttagtcccttaacttaatttcaggtaacag 33471460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 44344025 - 44344066
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    |||||||||| |||||||| |||||||||||||||| |||||    
T  44344025 caaaattacacttttagtcccttaacttaatttcaggtaaca 44344066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 3973475 - 3973515
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataac 215  Q
    |||||||||||||||  |||||||||||||||||| |||||    
T  3973475 caaaattacattttttttctcttaacttaatttcatataac 3973515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 40770451 - 40770411
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    ||||||||| |||||||| |||||||||||||||| |||||    
T  40770451 aaaattacacttttagtcccttaacttaatttcaggtaaca 40770411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 40934729 - 40934689
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataaca 216  Q
    ||||||||| |||||||| |||||||||||||||| |||||    
T  40934729 aaaattacacttttagtcccttaacttaatttcaggtaaca 40934689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 258960 - 258905
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  258960 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 258905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 4471 - 4533
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  4471 aagcttcaaatctaatattcttatgcaaacatagacgaggatcataaatttgaagattgaaag 4533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 257897 - 257842
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  257897 aagcttcaaatcttatattcttatgcaaacatagacgaggatcattgatttgaaga 257842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 8593 - 8531
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    ||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||| |||||    
T  8593 aagcttcaaatctaatattcttatgcaaacataaacagggatcatagatttgaagattgaaag 8531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 8700 - 8658
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| ||||||||| ||||||||||||||| ||||||    
T  8700 caaaattacacttttagtcttttaacttaatttcaggtaacag 8658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 108057 - 108000
Alignment:
Q  287 ttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaa 344  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||    
T  108057 ttcaaatctaatattcttatgcaaacatagacgagaatcatagattcgaagattgaaa 108000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 73578 - 73523
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaaga 338  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||    
T  73578 aagcttcaaatctaatattattatgcaaacatagaagaggatcatatatttgaaga 73523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 10028 - 10090
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||| ||||||||| ||||||||||| || ||||||||||||||||| |||||    
T  10028 aagcttcaaatctagtattcttatacaaacatagacaagtatcatagatttgaagattgaaag 10090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 283 - 325
Target Start/End: Complemental strand, 323618 - 323576
Alignment:
Q  283 aagcttcaaatctaatattcttatgcaaacatagacgaggatc 325  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  323618 aagcttcaaatctaatattcttatgcaaacatagacgaggatc 323576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 323424 - 323466
Alignment:
Q  175 caaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    |||||||||| ||||||||||||||||||||||||| ||||||    
T  323424 caaaattacacttttagtctcttaacttaatttcaggtaacag 323466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 323723 - 323682
Alignment:
Q  176 aaaattacatttttagtctcttaacttaatttcagataacag 217  Q
    ||||||| |||||||||| |||||||||||||||| ||||||    
T  323723 aaaattatatttttagtcccttaacttaatttcaggtaacag 323682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 345
Target Start/End: Complemental strand, 45065 - 45013
Alignment:
Q  292 atctaatattcttatgcaaacatagacgaggatcatagatttgaagatagaaag 345  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||| |||||    
T  45065 atctaatattcttatgcaaa-atagacgaggatcgtagatttgaagattgaaag 45013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 1824 - 1906
Alignment:
Q  6 tggtaaggtttgtatcaactccttgcattctttgcctaactcatcttcttgcaagtattttggcacaagagagttttcatcac 88  Q
    ||||||||||||||||||||| |||||||||  |  ||  |||||||||||||||||||| || | | |||||| ||||||||    
T  1824 tggtaaggtttgtatcaactctttgcattctagggttatgtcatcttcttgcaagtatttaggaaaatgagagtgttcatcac 1906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University