View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11225_high_2 (Length: 832)
Name: NF11225_high_2
Description: NF11225
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11225_high_2 |
 |  |
|
Alignment Details
Target: chr1 (Bit Score: 644; Significance: 0; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 644; E-Value: 0
Query Start/End: Original strand, 20 - 824
Target Start/End: Complemental strand, 27656993 - 27656189
Alignment:
| Q |
20 |
taatcatgatgatggtgaaacatagaggtaaaggtttttgtggtggctgaaagctagcaagattaattttgttttcggtactcatttgtggtggtcgagc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
27656993 |
taatcatgatgatggtgaaacatagaggtaaaggtttttgtggtggctgaaagctagcaagattaattttgttttcagtactcatttgtggtggtcgagc |
27656894 |
T |
 |
| Q |
120 |
ccacttttatgtttgggcatcgactagctttttcgtaattgctttgtcacgccttgtgctgaggcgattgcgttgtcagtgttaatataattcattttgg |
219 |
Q |
| |
|
|||||||||| |||| | |||| ||||||||||||| |||| |||| |||| ||||||||||| |||||| | ||||||||||||||||||||||||||| |
|
|
| T |
27656893 |
ccacttttatttttgaggatcggctagctttttcgtgattgttttggcacgtcttgtgctgagacgattgtgctgtcagtgttaatataattcattttgg |
27656794 |
T |
 |
| Q |
220 |
cctaatnnnnnnnngtttaccttgcaaaagtaaaccccagaagaaaagttttaatgtcctaaaaattatcttcttcacagcaaccttaactttgggaatt |
319 |
Q |
| |
|
||| || |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27656793 |
cctgataaaaaaaagtttaccttgcaaaagtaaaccccagaagagaagctttaatgtcctaaaaattatcttcttcacagcaaccttaactttgggaatt |
27656694 |
T |
 |
| Q |
320 |
ctctgcattgttacttataggtcataatcaatggactatatagatatacatgaactagaatctagaaataatcatacaggaatgaggatatagctctttg |
419 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
27656693 |
ctctgcattgttacttataggtcataatcaatggactatatagatatacatgaactagaaactagaaacaatcatacaaaaatgaggatatagctctttg |
27656594 |
T |
 |
| Q |
420 |
ttaatcaagtgacattgcattacatgcatagtataatacctttaatgcaagagctatagcaactccaacaatgaaaaggaaaaaaggcataacgaaatca |
519 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27656593 |
ttaattaagtgacattgcattacatgcatagtataatacctttaatgcaagagctatagcaactccaacaatgaaaaggaaaaaaggcataacgaaatca |
27656494 |
T |
 |
| Q |
520 |
gccaatgtacatccattccatggagagtgatcaatttgaggataagctccaccaccatcatccaccaatatcatcaactgtaaatatttttagatcgtca |
619 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
27656493 |
gccaatgtacatccattccatggagagtgatcaattcgaggataagctccaccaccatcatccaccaatatcatcaactgtaaatattgttagatcgtca |
27656394 |
T |
 |
| Q |
620 |
attaatatcgattgtcagataattaaaaatattttattatcattacgactatttctaaagttacacatgtgatttgttatgatttattgatagcgttaaa |
719 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
27656393 |
attaatatcgattgtcagataattaaaaatattttattttcattatgactacttctaaagttacacatatgatttgttatgatttattgatagcgttaaa |
27656294 |
T |
 |
| Q |
720 |
agtatcttagaaaagtatgtactaaccacgattgtgaggcccctaaatgcatcaagagttgcaaccctacnnnnnnngtgcttaacctcttgctcctttg |
819 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
27656293 |
agcatcttagaaaagtatgtactaaccacgattgtgaggcccctaaatgcatcaagagttgcaaccctactttttttgtgcttaatctcttgctcctttg |
27656194 |
T |
 |
| Q |
820 |
ctact |
824 |
Q |
| |
|
|||| |
|
|
| T |
27656193 |
gtact |
27656189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 140
Target Start/End: Complemental strand, 28351398 - 28351315
Alignment:
| Q |
57 |
ttgtggtggctgaaagctagcaagattaattttgttttcggtactcatttgtggtggtcgagcccacttttatgtttgggcatc |
140 |
Q |
| |
|
||||||||| |||||||||| || || ||| ||||| |||||| |||||||||||||||||||||| | ||||| |||||| |
|
|
| T |
28351398 |
ttgtggtggttgaaagctagtaacgctacctttattttcagtactcgtttgtggtggtcgagcccacttatgtgttttggcatc |
28351315 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 87; Significance: 3e-41; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 456 - 598
Target Start/End: Original strand, 41309954 - 41310096
Alignment:
| Q |
456 |
tacctttaatgcaagagctatagcaactccaacaatgaaaaggaaaaaaggcataacgaaatcagccaatgtacatccattccatggagagtgatcaatt |
555 |
Q |
| |
|
||||||||||||||||||||| || || ||||| |||||||| || ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
41309954 |
tacctttaatgcaagagctatggccacaccaacgatgaaaagaaagaaaggcataacaaaatcagccaaagtacatccattccatggagagtgatcaatg |
41310053 |
T |
 |
| Q |
556 |
tgaggataagctccaccaccatcatccaccaatatcatcaact |
598 |
Q |
| |
|
| | ||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
41310054 |
cgtgaataagctccaccagcatcgtccaccaatatcatcaact |
41310096 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 456 - 573
Target Start/End: Original strand, 41324645 - 41324762
Alignment:
| Q |
456 |
tacctttaatgcaagagctatagcaactccaacaatgaaaaggaaaaaaggcataacgaaatcagccaatgtacatccattccatggagagtgatcaatt |
555 |
Q |
| |
|
||||||||||||||| ||||| ||||| |||||||||||||| || |||||||| || ||||||||||| |||||||||| ||| || | |||||||| |
|
|
| T |
41324645 |
tacctttaatgcaagggctatggcaacaccaacaatgaaaagaaagaaaggcattacaaaatcagccaaagtacatccatcccacggggcatgatcaatg |
41324744 |
T |
 |
| Q |
556 |
tgaggataagctccacca |
573 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
41324745 |
cgtggataagctccacca |
41324762 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 41309780 - 41309843
Alignment:
| Q |
234 |
gtttaccttgcaaaagtaaaccccagaagaaaagttttaatgtcctaaaaattatcttcttcac |
297 |
Q |
| |
|
|||||||||||||||||| |||||| |||| |||||| |||||||| | ||||||||||||||| |
|
|
| T |
41309780 |
gtttaccttgcaaaagtataccccaaaagagaagtttcaatgtcctgagaattatcttcttcac |
41309843 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 9895336 - 9895276
Alignment:
| Q |
85 |
attttgttttcggtactcatttgtggtggtcgagcccacttttatgtttgggcatcgacta |
145 |
Q |
| |
|
|||||||||| |||| || | |||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
9895336 |
attttgtttttggtattcgtatgtggtggacgagcccgcttttatgtttgggcatcgacta |
9895276 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 740 - 786
Target Start/End: Original strand, 41310313 - 41310359
Alignment:
| Q |
740 |
actaaccacgattgtgaggcccctaaatgcatcaagagttgcaaccc |
786 |
Q |
| |
|
||||||||| || ||||||||||||||||||||||| |||||||||| |
|
|
| T |
41310313 |
actaaccacaatggtgaggcccctaaatgcatcaagtgttgcaaccc |
41310359 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 234 - 301
Target Start/End: Original strand, 41324478 - 41324545
Alignment:
| Q |
234 |
gtttaccttgcaaaagtaaaccccagaagaaaagttttaatgtcctaaaaattatcttcttcacagca |
301 |
Q |
| |
|
||||||||||||| |||| |||||| |||| ||| || |||||||||| |||||||| ||||||||| |
|
|
| T |
41324478 |
gtttaccttgcaatagtataccccaaaagagaagcttcaatgtcctaagtattatctttttcacagca |
41324545 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 139
Target Start/End: Original strand, 38652447 - 38652501
Alignment:
| Q |
85 |
attttgttttcggtactcatttgtggtggtcgagcccacttttatgtttgggcat |
139 |
Q |
| |
|
||||| |||| || |||||| |||||||||||||||| ||| ||||||||||||| |
|
|
| T |
38652447 |
attttatttttgggactcatatgtggtggtcgagcccgcttgtatgtttgggcat |
38652501 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 53; Significance: 6e-21; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 20532502 - 20532598
Alignment:
| Q |
56 |
tttgtggtggctgaaagctagcaagattaattttgttttcggtactcatttgtggtggtcgagcccacttttatgtttgggcatcgactagcttttt |
152 |
Q |
| |
|
|||||||||||||||||| || |||| | ||||||||||| ||||||||||||||||||||||||||| | ||||||||||||| |||| ||||| |
|
|
| T |
20532502 |
tttgtggtggctgaaagccagtaagactgcctttgttttcggcactcatttgtggtggtcgagcccacttatgtgtttgggcatcggctagattttt |
20532598 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 16984007 - 16983938
Alignment:
| Q |
149 |
ttttcgtaattgctttgtcacgccttgtgctgaggcgattgcgttgtcagtgttaatataattcattttg |
218 |
Q |
| |
|
||||||| |||| |||| ||||||||||||||| |||||||| |||||||||||||||||||||||||| |
|
|
| T |
16984007 |
ttttcgtgattgttttggcacgccttgtgctgaagcgattgcactgtcagtgttaatataattcattttg |
16983938 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 20532624 - 20532692
Alignment:
| Q |
148 |
tttttcgtaattgctttgtcacgccttgtgctgaggcgattgcgttgtcagtgttaatataattcatttt |
217 |
Q |
| |
|
|||||||| ||| |||| |||||||||| ||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
20532624 |
tttttcgtgatttctttcgcacgccttgtactg-ggcgattgcgttgtcagtgttaatataattcatttt |
20532692 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 47844140 - 47844201
Alignment:
| Q |
56 |
tttgtggtggctgaaagctagcaagattaattttgttttcggtactcatttgtggtggtcga |
117 |
Q |
| |
|
|||||||||||| |||||||| ||| |||||| ||||||||| ||||||||||||||||| |
|
|
| T |
47844140 |
tttgtggtggctaaaagctagaaaggccaattttattttcggtattcatttgtggtggtcga |
47844201 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 152
Target Start/End: Complemental strand, 21014411 - 21014360
Alignment:
| Q |
101 |
tcatttgtggtggtcgagcccacttttatgtttgggcatcgactagcttttt |
152 |
Q |
| |
|
|||||||||||||| |||||||||| | ||||||||||||| ||| |||||| |
|
|
| T |
21014411 |
tcatttgtggtggttgagcccacttatgtgtttgggcatcgtctaacttttt |
21014360 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 18148205 - 18148301
Alignment:
| Q |
56 |
tttgtggtggctgaaagctagcaagattaattttgttttcggtactcatttgtggtggtcgagcccacttttatgtttgggcatcgactagcttttt |
152 |
Q |
| |
|
|||||||||| |||||||||| || || ||||||||||||||||||||||||||||| ||| ||||| | |||||||| |||| |||||||||| |
|
|
| T |
18148205 |
tttgtggtggttgaaagctagtaacgctacctttgttttcggtactcatttgtggtggtcaagctcacttatgtgtttgggtatcggctagcttttt |
18148301 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 44472991 - 44472935
Alignment:
| Q |
96 |
ggtactcatttgtggtggtcgagcccacttttatgtttgggcatcgactagcttttt |
152 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||| |||||||||||||||||| ||||| |
|
|
| T |
44472991 |
ggtactcattcgtggtggtcgagccctcttttgtgtttgggcatcgactagtttttt |
44472935 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 139
Target Start/End: Complemental strand, 7708915 - 7708836
Alignment:
| Q |
60 |
tggtggctgaaagctagcaagattaattttgttttcggtactcatttgtggtggtcgagcccacttttatgtttgggcat |
139 |
Q |
| |
|
|||||||| ||||||| || ||||||||||||| |||| |||| |||||||||||||||| || || ||||||||||| |
|
|
| T |
7708915 |
tggtggcttaaagctaagaaagttaattttgtttttggtattcatatgtggtggtcgagcccgctcttgtgtttgggcat |
7708836 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 127
Target Start/End: Original strand, 26317580 - 26317625
Alignment:
| Q |
82 |
ttaattttgttttcggtactcatttgtggtggtcgagcccactttt |
127 |
Q |
| |
|
||||||||||||| | || ||||||||||||||||||||||||||| |
|
|
| T |
26317580 |
ttaattttgtttttgctattcatttgtggtggtcgagcccactttt |
26317625 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 37444783 - 37444722
Alignment:
| Q |
86 |
ttttgttttcggtactcatttgtggtggtcgagcccacttttatgtttgggcatcgactagc |
147 |
Q |
| |
|
|||| |||| || ||||||||||| ||||||||||| || || ||||||||||||||||||| |
|
|
| T |
37444783 |
ttttatttttggcactcatttgtgatggtcgagccccctgttgtgtttgggcatcgactagc |
37444722 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 141
Target Start/End: Original strand, 17765481 - 17765514
Alignment:
| Q |
108 |
tggtggtcgagcccacttttatgtttgggcatcg |
141 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |
|
|
| T |
17765481 |
tggtggtcgagcccacttttatgtatgggcatcg |
17765514 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 3731393 - 3731346
Alignment:
| Q |
172 |
cttgtgctgaggcgattgcgttgtcagtgttaatataattcattttgg |
219 |
Q |
| |
|
|||||||||| || |||||||||||||||||||||||||||||||||| |
|
|
| T |
3731393 |
cttgtgctgaagcaattgcgttgtcagtgttaatataattcattttgg |
3731346 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 33184984 - 33184916
Alignment:
| Q |
151 |
ttcgtaattgctttgtcacgccttgtgctgaggcgattgcgttgtcagtgttaatataattcattttggc |
220 |
Q |
| |
|
||||| |||| |||| ||||||||||||||| || |||||| ||||||||||||| |||||||||||||| |
|
|
| T |
33184984 |
ttcgtgattgttttggcacgccttgtgctgaagcaattgcgatgtcagtgttaat-taattcattttggc |
33184916 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 33185109 - 33185013
Alignment:
| Q |
56 |
tttgtggtggctgaaagctagcaagattaattttgttttcggtactcatttgtggtggtcgagcccacttttatgtttgggcatcgactagcttttt |
152 |
Q |
| |
|
|||||||||| |||||||||| || || |||| |||| |||||||||| |||||||||||||||||| | ||| || ||||| ||||||||||| |
|
|
| T |
33185109 |
tttgtggtggttgaaagctagtaatgctacatttgctttcagtactcatttttggtggtcgagcccacttatgtgtgtgtgcatcaactagcttttt |
33185013 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 10919768 - 10919711
Alignment:
| Q |
161 |
ctttgtcacgccttgtgctgaggcgattgcgttgtcagtgttaatataattcattttg |
218 |
Q |
| |
|
||||| |||| |||||||||| | ||| ||||||||||||||||||||||||||||| |
|
|
| T |
10919768 |
ctttggcacgtcttgtgctgaagtaattacgttgtcagtgttaatataattcattttg |
10919711 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 145
Target Start/End: Original strand, 15959333 - 15959370
Alignment:
| Q |
108 |
tggtggtcgagcccacttttatgtttgggcatcgacta |
145 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
15959333 |
tggtggtcgagcccacttttatgtatgggcatcgacta |
15959370 |
T |
 |
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Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 140
Target Start/End: Original strand, 10587381 - 10587415
Alignment:
| Q |
106 |
tgtggtggtcgagcccacttttatgtttgggcatc |
140 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| |
|
|
| T |
10587381 |
tgtggtggtcgagcccacttgtatgtttgggcatc |
10587415 |
T |
 |
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Target: chr8 (Bit Score: 38; Significance: 0.000000000005; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 45439370 - 45439434
Alignment:
| Q |
87 |
tttgttttcggtactcatttgtggtggtcgagcccacttttatgtttgggcatcgactagcttttt |
152 |
Q |
| |
|
|||||||| |||||||||| |||| |||||||||||||| | ||||||||||||| |||||||||| |
|
|
| T |
45439370 |
tttgtttttggtactcatt-gtggcggtcgagcccacttgtgtgtttgggcatcggctagcttttt |
45439434 |
T |
 |
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Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 120
Target Start/End: Original strand, 9594695 - 9594729
Alignment:
| Q |
86 |
ttttgttttcggtactcatttgtggtggtcgagcc |
120 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||| |
|
|
| T |
9594695 |
ttttgttttcggcactcatttgtggtggtcgagcc |
9594729 |
T |
 |
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Target: chr4 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 2187081 - 2187028
Alignment:
| Q |
86 |
ttttgttttcggtactcatttgtggtggtcgagcccacttttatgtttgggcat |
139 |
Q |
| |
|
||||||||| || |||||| |||||||||||||||| ||| | ||||||||||| |
|
|
| T |
2187081 |
ttttgtttttgggactcatatgtggtggtcgagcccgcttgtttgtttgggcat |
2187028 |
T |
 |
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