View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11227_high_2 (Length: 722)

Name: NF11227_high_2
Description: NF11227
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11227_high_2
NF11227_high_2
[»] chr7 (37 HSPs)
chr7 (16-658)||(2385310-2385935)
chr7 (275-391)||(42117464-42117580)
chr7 (119-234)||(1563681-1563796)
chr7 (125-243)||(12772119-12772237)
chr7 (127-243)||(3392471-3392587)
chr7 (125-192)||(45640040-45640107)
chr7 (125-243)||(3766815-3766933)
chr7 (125-235)||(42547976-42548086)
chr7 (330-391)||(42117535-42117596)
chr7 (119-243)||(15238893-15239017)
chr7 (119-243)||(32619354-32619478)
chr7 (125-252)||(12615746-12615873)
chr7 (125-243)||(24781034-24781152)
chr7 (125-243)||(27424843-27424960)
chr7 (665-703)||(34757364-34757402)
chr7 (125-243)||(35950132-35950250)
chr7 (156-234)||(41913743-41913821)
chr7 (284-381)||(18654560-18654657)
chr7 (666-703)||(46532642-46532679)
chr7 (166-250)||(47287853-47287937)
chr7 (166-234)||(30004538-30004606)
chr7 (119-243)||(35683069-35683193)
chr7 (119-250)||(4960781-4960912)
chr7 (125-252)||(19752916-19753043)
chr7 (119-234)||(30806128-30806243)
chr7 (119-234)||(31026232-31026347)
chr7 (125-243)||(9877215-9877333)
chr7 (129-243)||(23102510-23102624)
chr7 (125-243)||(29617409-29617527)
chr7 (119-177)||(29625989-29626047)
chr7 (125-243)||(31077851-31077969)
chr7 (125-243)||(32676890-32677008)
chr7 (125-243)||(36391852-36391970)
chr7 (325-390)||(8169166-8169231)
chr7 (286-383)||(19058912-19059009)
chr7 (119-243)||(29281284-29281409)
chr7 (329-382)||(34733610-34733663)
[»] chr5 (39 HSPs)
chr5 (294-389)||(5110542-5110637)
chr5 (119-234)||(28684842-28684957)
chr5 (129-251)||(8241046-8241168)
chr5 (119-243)||(15241400-15241524)
chr5 (119-251)||(36124395-36124527)
chr5 (119-234)||(3515408-3515522)
chr5 (285-383)||(35154158-35154256)
chr5 (119-243)||(17545114-17545238)
chr5 (147-243)||(17666010-17666106)
chr5 (124-231)||(32392073-32392180)
chr5 (125-244)||(41156331-41156450)
chr5 (125-251)||(8968745-8968871)
chr5 (665-703)||(9226440-9226478)
chr5 (119-233)||(36888337-36888451)
chr5 (148-202)||(39804417-39804471)
chr5 (119-243)||(5900296-5900419)
chr5 (119-243)||(9835037-9835161)
chr5 (119-243)||(11146471-11146595)
chr5 (286-366)||(12295707-12295787)
chr5 (119-243)||(29154847-29154970)
chr5 (119-243)||(32706326-32706450)
chr5 (119-235)||(33383585-33383701)
chr5 (127-251)||(33999056-33999180)
chr5 (119-214)||(7545340-7545435)
chr5 (294-357)||(17967353-17967416)
chr5 (119-230)||(20719755-20719866)
chr5 (164-243)||(31074114-31074193)
chr5 (119-250)||(43328266-43328397)
chr5 (125-243)||(4745824-4745942)
chr5 (125-243)||(11897252-11897370)
chr5 (125-243)||(12463760-12463878)
chr5 (142-235)||(4153559-4153652)
chr5 (144-173)||(5195112-5195141)
chr5 (119-244)||(16386683-16386808)
chr5 (141-246)||(17175015-17175120)
chr5 (340-385)||(18261610-18261655)
chr5 (125-234)||(25400315-25400424)
chr5 (119-192)||(36564364-36564437)
chr5 (119-232)||(41319393-41319506)
[»] chr3 (33 HSPs)
chr3 (142-245)||(29559639-29559742)
chr3 (119-243)||(19591521-19591645)
chr3 (119-243)||(50659594-50659718)
chr3 (127-246)||(49194642-49194761)
chr3 (142-243)||(12894495-12894596)
chr3 (119-243)||(15975156-15975280)
chr3 (119-243)||(45701348-45701472)
chr3 (119-243)||(47098736-47098860)
chr3 (125-243)||(7938243-7938362)
chr3 (125-219)||(40739159-40739253)
chr3 (125-234)||(10176851-10176960)
chr3 (119-191)||(10349456-10349528)
chr3 (119-243)||(11820008-11820132)
chr3 (119-234)||(4640422-4640537)
chr3 (123-174)||(4807991-4808042)
chr3 (141-192)||(25994536-25994587)
chr3 (119-234)||(26942766-26942881)
chr3 (125-243)||(4139004-4139122)
chr3 (125-243)||(7269959-7270077)
chr3 (119-157)||(9326404-9326442)
chr3 (125-243)||(17608267-17608385)
chr3 (665-703)||(20080212-20080250)
chr3 (125-243)||(31327449-31327567)
chr3 (125-243)||(37800559-37800677)
chr3 (119-253)||(40192150-40192283)
chr3 (125-243)||(40933779-40933897)
chr3 (125-243)||(50496762-50496880)
chr3 (125-243)||(52974001-52974119)
chr3 (294-360)||(54726090-54726156)
chr3 (125-234)||(10482801-10482910)
chr3 (125-234)||(18194351-18194460)
chr3 (119-244)||(36625113-36625238)
chr3 (142-243)||(52984014-52984115)
[»] chr2 (29 HSPs)
chr2 (283-386)||(43542927-43543030)
chr2 (119-251)||(43936697-43936829)
chr2 (119-243)||(2289614-2289738)
chr2 (313-382)||(13021718-13021787)
chr2 (305-386)||(22450939-22451020)
chr2 (336-397)||(43714129-43714190)
chr2 (150-235)||(45119680-45119765)
chr2 (119-243)||(11050699-11050823)
chr2 (287-359)||(36547373-36547445)
chr2 (147-243)||(36748891-36748986)
chr2 (147-202)||(7717575-7717630)
chr2 (119-213)||(13773434-13773528)
chr2 (119-192)||(14518339-14518412)
chr2 (286-391)||(30435230-30435335)
chr2 (166-251)||(32609176-32609261)
chr2 (301-382)||(40691148-40691229)
chr2 (125-250)||(41509513-41509638)
chr2 (334-383)||(43542997-43543046)
chr2 (665-697)||(7648535-7648567)
chr2 (119-251)||(17601075-17601207)
chr2 (119-234)||(2643710-2643825)
chr2 (119-214)||(33587122-33587217)
chr2 (333-383)||(11225964-11226014)
chr2 (663-697)||(11384906-11384940)
chr2 (119-177)||(18862322-18862380)
chr2 (125-243)||(20296422-20296540)
chr2 (340-386)||(33407403-33407449)
chr2 (125-243)||(36182646-36182764)
chr2 (125-243)||(40535397-40535515)
[»] chr4 (46 HSPs)
chr4 (127-243)||(34040432-34040548)
chr4 (114-246)||(10417158-10417290)
chr4 (119-243)||(42231516-42231640)
chr4 (125-243)||(8965098-8965216)
chr4 (119-225)||(33530815-33530921)
chr4 (114-234)||(15064139-15064259)
chr4 (127-234)||(1457968-1458075)
chr4 (119-234)||(42218763-42218878)
chr4 (665-703)||(9362572-9362610)
chr4 (119-233)||(10042360-10042474)
chr4 (294-356)||(19596037-19596099)
chr4 (665-703)||(40609754-40609792)
chr4 (125-235)||(48615420-48615530)
chr4 (187-252)||(35207161-35207226)
chr4 (125-234)||(36132242-36132351)
chr4 (119-220)||(54029580-54029681)
chr4 (166-250)||(542803-542887)
chr4 (325-373)||(15659957-15660005)
chr4 (119-243)||(39023179-39023303)
chr4 (119-191)||(46562699-46562771)
chr4 (127-235)||(47890707-47890815)
chr4 (283-382)||(5924512-5924611)
chr4 (128-211)||(17709411-17709494)
chr4 (136-243)||(18360497-18360604)
chr4 (136-243)||(36602325-36602432)
chr4 (125-252)||(43596890-43597017)
chr4 (129-220)||(47929272-47929363)
chr4 (125-192)||(55260261-55260328)
chr4 (119-173)||(2860674-2860728)
chr4 (125-243)||(3847685-3847803)
chr4 (148-214)||(8089222-8089288)
chr4 (294-384)||(11045658-11045748)
chr4 (294-384)||(11047506-11047596)
chr4 (142-252)||(11375854-11375964)
chr4 (185-243)||(19594237-19594295)
chr4 (119-181)||(21432680-21432742)
chr4 (125-243)||(40994051-40994169)
chr4 (125-243)||(43147332-43147450)
chr4 (125-243)||(45112060-45112177)
chr4 (125-243)||(46774978-46775096)
chr4 (113-174)||(624553-624614)
chr4 (119-192)||(626924-626997)
chr4 (142-243)||(4234250-4234351)
chr4 (142-243)||(12504608-12504709)
chr4 (142-231)||(27103066-27103155)
chr4 (142-251)||(27362794-27362903)
[»] chr1 (39 HSPs)
chr1 (110-243)||(48897050-48897183)
chr1 (119-251)||(5862968-5863100)
chr1 (119-250)||(18533998-18534129)
chr1 (119-234)||(47930613-47930728)
chr1 (286-356)||(41502796-41502866)
chr1 (119-243)||(4482540-4482664)
chr1 (294-385)||(39940526-39940616)
chr1 (125-243)||(32594255-32594373)
chr1 (125-243)||(46965744-46965862)
chr1 (665-703)||(47215623-47215661)
chr1 (127-251)||(12662683-12662807)
chr1 (119-160)||(27178651-27178692)
chr1 (119-243)||(2277758-2277882)
chr1 (312-356)||(2740468-2740512)
chr1 (142-234)||(6129998-6130090)
chr1 (119-251)||(8984448-8984579)
chr1 (125-233)||(13538394-13538502)
chr1 (294-366)||(15290607-15290679)
chr1 (119-243)||(16343032-16343156)
chr1 (119-243)||(22563390-22563514)
chr1 (119-243)||(37662499-37662623)
chr1 (125-252)||(6438012-6438139)
chr1 (119-174)||(12613250-12613305)
chr1 (119-246)||(14396440-14396567)
chr1 (286-369)||(34184460-34184543)
chr1 (135-234)||(36726574-36726673)
chr1 (119-234)||(50746724-50746839)
chr1 (125-243)||(1570140-1570258)
chr1 (125-243)||(15819549-15819667)
chr1 (125-243)||(26584694-26584812)
chr1 (336-386)||(44938280-44938330)
chr1 (283-369)||(49586275-49586361)
chr1 (151-188)||(993527-993564)
chr1 (125-162)||(11356839-11356876)
chr1 (125-234)||(12502202-12502311)
chr1 (147-192)||(13763816-13763861)
chr1 (301-390)||(22340934-22341023)
chr1 (135-188)||(22592539-22592592)
chr1 (286-359)||(24478701-24478774)
[»] chr8 (46 HSPs)
chr8 (119-243)||(38955136-38955260)
chr8 (119-250)||(31450899-31451030)
chr8 (119-213)||(42801591-42801685)
chr8 (119-243)||(9070667-9070791)
chr8 (147-251)||(43053855-43053959)
chr8 (125-243)||(8265272-8265390)
chr8 (125-251)||(13406596-13406722)
chr8 (119-243)||(94453-94577)
chr8 (119-251)||(16432070-16432202)
chr8 (119-235)||(29733947-29734063)
chr8 (142-250)||(36918489-36918597)
chr8 (142-258)||(42880937-42881053)
chr8 (119-234)||(34266025-34266140)
chr8 (119-234)||(34894382-34894497)
chr8 (125-243)||(1632388-1632506)
chr8 (125-243)||(8034360-8034478)
chr8 (665-703)||(9208204-9208242)
chr8 (125-243)||(34413066-34413184)
chr8 (125-243)||(37717367-37717485)
chr8 (125-250)||(2787029-2787154)
chr8 (119-220)||(31152961-31153062)
chr8 (125-234)||(38219516-38219625)
chr8 (119-228)||(42511525-42511634)
chr8 (135-243)||(133419-133527)
chr8 (119-243)||(2792783-2792907)
chr8 (136-192)||(7678994-7679050)
chr8 (119-235)||(32630257-32630373)
chr8 (284-356)||(37508975-37509046)
chr8 (125-252)||(1937305-1937432)
chr8 (119-234)||(7816416-7816531)
chr8 (125-243)||(10736822-10736940)
chr8 (125-243)||(11787155-11787273)
chr8 (125-243)||(11875890-11876008)
chr8 (125-243)||(11890897-11891015)
chr8 (125-243)||(29716864-29716982)
chr8 (665-703)||(38234150-38234188)
chr8 (125-234)||(5328515-5328624)
chr8 (125-162)||(9735788-9735825)
chr8 (284-393)||(9812455-9812564)
chr8 (663-696)||(12783900-12783933)
chr8 (119-192)||(13105146-13105219)
chr8 (166-243)||(23435222-23435299)
chr8 (119-192)||(38774126-38774199)
chr8 (166-243)||(40362052-40362129)
chr8 (125-234)||(43186866-43186975)
chr8 (157-250)||(44088936-44089028)
[»] scaffold0031 (1 HSPs)
scaffold0031 (141-243)||(49965-50067)
[»] scaffold0690 (1 HSPs)
scaffold0690 (119-243)||(3670-3794)
[»] scaffold0025 (1 HSPs)
scaffold0025 (119-243)||(65729-65853)
[»] chr6 (25 HSPs)
chr6 (127-243)||(361167-361283)
chr6 (119-234)||(27218897-27219012)
chr6 (119-246)||(32611496-32611623)
chr6 (125-243)||(12284125-12284243)
chr6 (125-235)||(28222875-28222984)
chr6 (125-234)||(6210067-6210176)
chr6 (663-703)||(2688956-2688996)
chr6 (119-243)||(10517203-10517327)
chr6 (127-243)||(10934603-10934719)
chr6 (119-243)||(17441781-17441905)
chr6 (125-233)||(19892224-19892332)
chr6 (125-172)||(7674883-7674930)
chr6 (124-243)||(9372148-9372267)
chr6 (119-202)||(10913454-10913537)
chr6 (119-234)||(21248545-21248659)
chr6 (157-243)||(1435813-1435899)
chr6 (294-360)||(6033005-6033071)
chr6 (125-243)||(19953776-19953894)
chr6 (119-233)||(31104896-31105009)
chr6 (125-243)||(31802057-31802175)
chr6 (148-177)||(1765064-1765093)
chr6 (142-231)||(2500479-2500568)
chr6 (142-243)||(3294768-3294869)
chr6 (119-220)||(10913021-10913122)
chr6 (142-243)||(32837346-32837447)
[»] scaffold1787 (1 HSPs)
scaffold1787 (135-234)||(413-512)
[»] scaffold0464 (1 HSPs)
scaffold0464 (119-174)||(5625-5680)
[»] scaffold0608 (1 HSPs)
scaffold0608 (125-243)||(8970-9088)
[»] scaffold0038 (1 HSPs)
scaffold0038 (125-235)||(23373-23482)
[»] scaffold0394 (1 HSPs)
scaffold0394 (119-243)||(1266-1390)
[»] scaffold0294 (1 HSPs)
scaffold0294 (119-235)||(17203-17319)
[»] scaffold0254 (1 HSPs)
scaffold0254 (119-243)||(1321-1445)
[»] scaffold0157 (1 HSPs)
scaffold0157 (142-243)||(15768-15869)


Alignment Details
Target: chr7 (Bit Score: 466; Significance: 0; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 466; E-Value: 0
Query Start/End: Original strand, 16 - 658
Target Start/End: Complemental strand, 2385935 - 2385310
Alignment:
Q  16 atgaacatcaccatatcctaccgttaatcaataggctggaccattaaaacacctagccctaacttgcagattagataaatttgttactccttttatgact 115  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  2385935 atgaacatcaccataacctaccgttaatcaataggctggaccattaaaacacctagccctaacttgcagattaaataaatttgttactccttt-atgact 2385837  T
Q  116 ttctttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgt 215  Q
    || |||||||         |||||||||||||||||||||| ||||| ||||||||||||||||||| |||| ||||||||||| ||||||||||||| |    
T  2385836 tt-tttttat---------tagtgattagaactcacacattgtaaatgtagagaagtggagtatccggagtttgaacgctgacctctacgtataatatat 2385747  T
Q  216 aatatacctatcaactgagtgaagctcatggagataccccttttgga-ctttattacaaaagaaaatacattttttaatttcatttaataaatggtgtat 314  Q
    |||||||||||||||||||| ||| ||||||| ||||||| ||| || ||||||||||||||||||| |||||||| | |||||||||||||||||||||    
T  2385746 aatatacctatcaactgagtaaagttcatggaaataccccctttcgaactttattacaaaagaaaattcatttttttaattcatttaataaatggtgtat 2385647  T
Q  315 ctgatttttaatatagactagataaattatttattgaatgaacctacaaagtgaactttctcttataatagaaaccaaaatagaagtattatcgacactc 414  Q
    ||||| ||||||||||| |||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2385646 ctgatatttaatatagaatagataaattatttattgaat-------caaagtgaactttctcttataatagaaaccaaaatagaagtattatcgacactc 2385554  T
Q  415 cacatcattatattaacaatgaatattttaattttaaataaactacaatttgaagatacagattttcttttctttcaatatattgtaaacaaataatggt 514  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||| ||||||||||||||||||||||| |||||    
T  2385553 cacatcattatattaacaatgaatattttaattttaaataaactataattttaagatacatattttctttactttcaatatattgtaaacaaattatggt 2385454  T
Q  515 acacattttcaaaaagtatcatactttcacagtaagcctggtaaaaaggcattccattaatgcattatgtactctatctagagatagattgtttcaggaa 614  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2385453 acacattttcaaaaagtatcatactttcacagtaagcctggtaaaaaggcattccattaatgcattatgtactctatctagagatagattgtttcaggaa 2385354  T
Q  615 gcaatggacagcttaattctaccaaagagagagcttatttttat 658  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  2385353 gcaatggacaacttaattctaccaaagagagagcttatttttat 2385310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 275 - 391
Target Start/End: Complemental strand, 42117580 - 42117464
Alignment:
Q  275 agaaaatacattttttaatttcatttaataaatggtgtatctgatttttaatatagactagataaattatttattgaatgaacctacaaagtgaactttc 374  Q
    ||||||| || ||||||  |||||| |||||||| |||||||  |   |||||||||||| ||| || |||||||| ||||||||| |||||||||||||    
T  42117580 agaaaattcactttttaggttcattcaataaatgatgtatctagtccctaatatagactaaatacatcatttattggatgaacctaaaaagtgaactttc 42117481  T
Q  375 tcttataatagaaacca 391  Q
    ||||||| |||| ||||    
T  42117480 tcttatattagagacca 42117464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 234
Target Start/End: Original strand, 1563681 - 1563796
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||||||||||||| ||||| ||||| |||||||| ||||| | ||||||||||| || ||||  |||||||| | | ||||| | ||||||||| |||    
T  1563681 tttttatcaagtagcctagtggttagagctcacacaatttaattgtagagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaat 1563780  T
Q  219 atacctatcaactgag 234  Q
    || |||| ||||||||    
T  1563781 atccctaccaactgag 1563796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 12772237 - 12772119
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| ||| |||||||||||||||||  |||||||| | ||| ||| | ||||||||| ||||| |||    
T  12772237 tcaagtagcctagtggctagagctcacacaatttaattatggagaagtggagtatccggggttcgaaccccgactcctgcatataatatgcaatatccct 12772138  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  12772137 accaactgagctaagctca 12772119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 3392587 - 3392471
Alignment:
Q  127 aagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctat 226  Q
    ||||||| ||||||||||| |||||||| ||||| ||   |||||||| || || |  |||||||| | ||||||||| ||||||||| ||||| | |||    
T  3392587 aagtagcctagtgattagagctcacacaatttaattacgaagaagtggggtgtctggggttcgaaccccgacccctacatataatatgcaatatccatat 3392488  T
Q  227 caactgagtgaagctca 243  Q
    ||||||||| |||||||    
T  3392487 caactgagttaagctca 3392471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 45640040 - 45640107
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaac 192  Q
    ||||||||| |||||| |||| |||||||| ||||| |||||||||||||||| |||| |||||||||    
T  45640040 tcaagtagcctagtgactagagctcacacaatttaattatagagaagtggagtgtccggagttcgaac 45640107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 3766933 - 3766815
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| ||||| ||||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  3766933 tcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 3766834  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||| |||||||    
T  3766833 accaactgagttaagctca 3766815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 235
Target Start/End: Original strand, 42547976 - 42548086
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| || || |||||||||||||| ||||| | | ||||||| |||| ||||| |||||||| |   ||||||| ||||| ||||||||| |||    
T  42547976 tcaagtagcctaatggttagaactcacacaatttaattgtggagaagtagagtgtccgaggttcgaaccccagcccctacatataaaatgtaatattcct 42548075  T
Q  225 atcaactgagt 235  Q
    | |||||||||    
T  42548076 accaactgagt 42548086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 42117535 - 42117596
Alignment:
Q  330 gactagataaattatttattgaatgaacctacaaagtgaactttctcttataatagaaacca 391  Q
    ||||||||| || |||||||||||||||||| |||||||| ||||||| |||||||| ||||    
T  42117535 gactagatacatcatttattgaatgaacctaaaaagtgaattttctctcataatagagacca 42117596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 15239017 - 15238893
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| || || ||| |||||||||||| ||||  |||||||| | | ||||| | ||||||||| |||    
T  15239017 tttttgtcaagtagcctagtggctagagctcacacaattaaattatggagaagtggagtgtccggggttcgaaccccggcccctgcatataatatgcaat 15238918  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||  |||||||    
T  15238917 atccctaccaactgagctaagctca 15238893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 32619478 - 32619354
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||||| ||||||||| |||    
T  32619478 tttttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctacatataatatgcaat 32619379  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || | || ||||||||| |||||||    
T  32619378 atccttaacaactgagttaagctca 32619354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 252
Target Start/End: Complemental strand, 12615873 - 12615746
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||  ||||| ||||| |||||||| ||||| | | |||||| || || |||| ||||||||  |  |||||| | ||||||||| ||||| |||    
T  12615873 tcaagtagtctagtggttagagctcacacaatttaattgtggagaagcggggtgtccggagttcgaatcccaacccctgcatataatatgcaatatccct 12615774  T
Q  225 atcaactgagtgaagctcatggagatac 252  Q
    ||||||||||| ||||||| || |||||    
T  12615773 atcaactgagttaagctcaaggggatac 12615746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 24781152 - 24781034
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||||||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  24781152 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtatccggggttcgaaccccggctcctgcatataatatgcaatatccct 24781053  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  24781052 accaactgagctaagctca 24781034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 27424960 - 27424843
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| || |||| | |||||||||||||||||| |||||||| | | ||||| | ||||||||| ||||| |||    
T  27424960 tcaagtagcctagtggctagagctcacacaatt-aaatgtggagaagtggagtatccgaggttcgaaccccggcccctgcatataatatgcaatatccct 27424862  T
Q  225 atcaactgagtgaagctca 243  Q
      ||||||||  |||||||    
T  27424861 tccaactgagctaagctca 27424843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 665 - 703
Target Start/End: Original strand, 34757364 - 34757402
Alignment:
Q  665 tgttatttgaacaaccaatttggttgataacttttgtga 703  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  34757364 tgttatttgaacaaccaatttggttgacaacttttgtga 34757402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 35950250 - 35950132
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | ||| ||| | ||||||||| ||||| |||    
T  35950250 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatccct 35950151  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  35950150 accaactgagctaagctca 35950132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 234
Target Start/End: Original strand, 41913743 - 41913821
Alignment:
Q  156 tttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgag 234  Q
    ||||| |||||||||||||||| ||||  |||||||| ||||||||| | ||||| ||| |||||  ||||||||||||    
T  41913743 tttaattatagagaagtggagtgtccggggttcgaaccctgacccctgcatataaaatgcaatatctctatcaactgag 41913821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 284 - 381
Target Start/End: Complemental strand, 18654657 - 18654560
Alignment:
Q  284 attttttaatttcatttaataaatggtgtatctgatttttaatatagactagataaattatttattgaatgaacctacaaagtgaactttctcttata 381  Q
    ||||||||  || |||||||||||| ||||| || | | | |||||||| | ||| ||||||||||||| ||||||| ||||| |||||| |||||||    
T  18654657 attttttagatttatttaataaatgatgtatatggtatattatatagaccacatacattatttattgaaagaacctaaaaagtaaactttttcttata 18654560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 666 - 703
Target Start/End: Complemental strand, 46532679 - 46532642
Alignment:
Q  666 gttatttgaacaaccaatttggttgataacttttgtga 703  Q
    |||||||||||||||||||||||||| |||||||||||    
T  46532679 gttatttgaacaaccaatttggttgacaacttttgtga 46532642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 250
Target Start/End: Original strand, 47287853 - 47287937
Alignment:
Q  166 gagaagtggagtatccgaagttcgaa-cgctgacccctacgtataatatgtaatatacctatcaactgagtgaagctcatggagat 250  Q
    |||||||||||| ||||| ||||||| | ||| ||||||| ||||| ||||||||| |||| ||||||||| ||||||| ||||||    
T  47287853 gagaagtggagtgtccgaggttcgaatccctg-cccctacatataaaatgtaatatccctaccaactgagttaagctcacggagat 47287937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 166 - 234
Target Start/End: Original strand, 30004538 - 30004606
Alignment:
Q  166 gagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgag 234  Q
    ||||||||||||  |||| |||||||| | ||||||||  ||||||||||||||| |||| ||||||||    
T  30004538 gagaagtggagtggccgaggttcgaaccccgacccctatatataatatgtaatatccctaccaactgag 30004606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 35683069 - 35683193
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| || ||  |||| |||||||| ||||| | | |||||||||||| |||| ||||||||| | ||||||| | ||||| |||  ||    
T  35683069 tttttttcaagtagcctaatggatagagctcacacaatttaattgtggagaagtggagtgtccggagttcgaaccccgacccctgcatataaaatgcgat 35683168  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||  |||||||    
T  35683169 atccctaccaactgagctaagctca 35683193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 4960912 - 4960781
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| || |  |||||||| | ||| ||| | ||||||||| |||    
T  4960912 tttttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtcaggggttcgaaccccgactcctgcatataatatgcaat 4960813  T
Q  219 atacctatcaactgagtgaagctcatggagat 250  Q
    || ||||  |||||||  ||||||| ||||||    
T  4960812 atccctactaactgagctaagctcaaggagat 4960781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 252
Target Start/End: Original strand, 19752916 - 19753043
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  ||||||||||||| || || | | |||||||||||| |||   |||||||| | | ||||| | ||||||||| ||||| |||    
T  19752916 tcaagtagcctagtggctagaactcacacaattaaattgtggagaagtggagtgtccagggttcgaaccccggcccctgcatataatatgcaatatccct 19753015  T
Q  225 atcaactgagtgaagctcatggagatac 252  Q
    | ||||||||  ||||||| || |||||    
T  19753016 accaactgagctaagctcacggggatac 19753043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 30806243 - 30806128
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| | |||  ||||||||||||| ||||| | | |||||||||  | ||||  |||||||| | ||||||| | ||||||||| |||    
T  30806243 tttttgtcaagtagcttggtggctagaactcacacaatttaattgtggagaagtgggatgtccggggttcgaactccgacccctgcatataatatgcaat 30806144  T
Q  219 atacctatcaactgag 234  Q
    || |||| ||||||||    
T  30806143 atccctaccaactgag 30806128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 31026347 - 31026232
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| |||    
T  31026347 tttttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaat 31026248  T
Q  219 atacctatcaactgag 234  Q
    || |||| ||||||||    
T  31026247 atccctaccaactgag 31026232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 9877215 - 9877333
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||| ||| |||||  ||||||||||||| ||||| | | ||||||||| || ||||  |||||||| | | ||||| | ||||||||| ||||| |||    
T  9877215 tcaaggagcctagtggctagaactcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccct 9877314  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  9877315 accaactgagctaagctca 9877333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 243
Target Start/End: Original strand, 23102510 - 23102624
Alignment:
Q  129 gtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatca 228  Q
    ||||| |||||  ||||||||||||| ||||| | | ||||||||| || ||||  |||||||| | | ||||| | ||||||||| ||||| |||| ||    
T  23102510 gtagcctagtggctagaactcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctacca 23102609  T
Q  229 actgagtgaagctca 243  Q
    ||||||  |||||||    
T  23102610 actgagctaagctca 23102624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 29617527 - 29617409
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  29617527 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 29617428  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  29617427 accaactgagctaagctca 29617409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 29626047 - 29625989
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagt 177  Q
    |||| ||||||||||||| ||  ||||||||||||| || || ||||||||||||||||    
T  29626047 ttttgatcaagtagcataatggctagaactcacacaattaaattatagagaagtggagt 29625989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 31077851 - 31077969
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||  |||||  |||| |||||||| ||||| | | |||||||||||| ||||  ||||||||   | ||||| |||||||  |||||||| |||    
T  31077851 tcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccgcggcccctgcgtataaagtgtaatatccct 31077950  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||| |||||||    
T  31077951 accaactgagttaagctca 31077969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 32676890 - 32677008
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  32676890 tcaagtagcttagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 32676989  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  32676990 accaactgagctaagctca 32677008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 36391852 - 36391970
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    |||||||||  ||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | ||| ||| | ||||||||| ||||| |||    
T  36391852 tcaagtagcccagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatccct 36391951  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  36391952 accaactgagctaagctca 36391970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 325 - 390
Target Start/End: Original strand, 8169166 - 8169231
Alignment:
Q  325 atatagactagataaattatttattgaatgaacctacaaagtgaactttctcttataatagaaacc 390  Q
    |||||||||| ||| || |||||||||||||| ||| ||||| ||||||  |||||||||| ||||    
T  8169166 atatagactacatacatcatttattgaatgaatctaaaaagttaacttttgcttataatagtaacc 8169231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 383
Target Start/End: Complemental strand, 19059009 - 19058912
Alignment:
Q  286 tttttaatttcatttaataaatggtgtatctgatttttaatatagactagataaattatttattgaatgaacctacaaagtgaactttctcttataat 383  Q
    ||||||| |||||||| |||||| ||||| |  || ||||||||||||| ||  || |||||||||||||| ||| ||||| ||  || |||||||||    
T  19059009 tttttaagttcatttagtaaatgatgtatttagttcttaatatagactaaatgtatcatttattgaatgaatctaaaaagtaaatattatcttataat 19058912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 29281284 - 29281409
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataa-tatgtaa 217  Q
    ||||| ||||||||  |||||  |||| |||||||| ||||| | | |||||||||||  ||||  |||||||| | |||||||   ||||| |||| ||    
T  29281284 tttttgtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggagcgtccggtgttcgaaccccgacccctggatataaatatgcaa 29281383  T
Q  218 tatacctatcaactgagtgaagctca 243  Q
    ||| |||||||||||||| |||||||    
T  29281384 tatccctatcaactgagttaagctca 29281409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 34733610 - 34733663
Alignment:
Q  329 agactagataaattatttattgaatgaacctacaaagtgaactttctcttataa 382  Q
    |||||||||| |||||||||||||||||| || ||| | |||| ||||||||||    
T  34733610 agactagatacattatttattgaatgaacttaaaaaataaactctctcttataa 34733663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 3e-25; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 294 - 389
Target Start/End: Complemental strand, 5110637 - 5110542
Alignment:
Q  294 ttcatttaataaatggtgtatctgatttttaatatagactagataaattatttattgaatgaacctacaaagtgaactttctcttataatagaaac 389  Q
    |||||| |||||||| ||||| |||||| ||||||||| || ||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  5110637 ttcattcaataaatgatgtatttgatttctaatatagattatatatattatttattgaatgaatctaaaaagtgaactttctcttataatagaaac 5110542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 234
Target Start/End: Original strand, 28684842 - 28684957
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    |||| |||||||||| |||||  ||||| ||||||| || || |||||||||||||||| |||| |||||||||   ||||||||  ||||||||| |||    
T  28684842 ttttgatcaagtagcctagtggctagaattcacacaattaaattatagagaagtggagtgtccggagttcgaacctcgacccctatatataatatgcaat 28684941  T
Q  219 atacctatcaactgag 234  Q
    ||  ||||||||||||    
T  28684942 atcgctatcaactgag 28684957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 129 - 251
Target Start/End: Complemental strand, 8241168 - 8241046
Alignment:
Q  129 gtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatca 228  Q
    ||||| ||||| ||||| |||||||||||||||| | ||||||||| || ||||  |||||||| | ||||| | | ||||||||| ||||| |||| ||    
T  8241168 gtagcctagtggttagagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccgacccttgcatataatatgcaatatccctacca 8241069  T
Q  229 actgagtgaagctcatggagata 251  Q
    ||||||  |||||||||| ||||    
T  8241068 actgagctaagctcatggggata 8241046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 15241524 - 15241400
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||  |||||  |||| |||||||| ||||| | | ||||||||| || ||||| |||||||| | ||||||| | ||||||||| |||    
T  15241524 tttttgtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggggtgtccgaggttcgaaccccgacccctgcatataatatgcaat 15241425  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||||||||||||  |||||||    
T  15241424 attcctatcaactgagctaagctca 15241400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 119 - 251
Target Start/End: Complemental strand, 36124527 - 36124395
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||  ||||| ||||| |||||||| || || | | |||||||||||| ||||   ||||||| | ||||||| | ||||||||| |||    
T  36124527 tttttgtcaagtagtctagtggttagagctcacacagttaaattgtggagaagtggagtgtccgggattcgaaccccgacccctgcatataatatgcaat 36124428  T
Q  219 atacctatcaactgagtgaagctcatggagata 251  Q
    || |||||||||||||  ||||||| |||||||    
T  36124427 attcctatcaactgagctaagctcacggagata 36124395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 234
Target Start/End: Original strand, 3515408 - 3515522
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| || ||||||||||||| |||| |||||||| ||||| | | |||||||||||| |||| | ||||||| ||||||||| | ||||||| | |||    
T  3515408 tttttgtcgagtagcatagtgactagagctcacacaatttaattgtggagaagtggagtgtccggaattcgaac-ctgacccctgcatataatacgcaat 3515506  T
Q  219 atacctatcaactgag 234  Q
    || ||| |||||||||    
T  3515507 atccctgtcaactgag 3515522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 285 - 383
Target Start/End: Original strand, 35154158 - 35154256
Alignment:
Q  285 ttttttaatttcatttaataaatggtgtatctgatttttaatatagactagataaattatttattgaatgaacctacaaagtgaactttctcttataat 383  Q
    |||||||  ||||||||||||||||||||| || | | || || | |||||||| ||||||| |||||||||| || ||| |||| |||||||||||||    
T  35154158 ttttttagattcatttaataaatggtgtatttggtctatattagaaactagatacattatttgttgaatgaacttaaaaaatgaattttctcttataat 35154256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 17545114 - 17545238
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| || || ||| |||||||||||| ||||  |||||||| | | ||||| | ||||||||| |||    
T  17545114 tttttgtcaagtagcctagtggctagagctcacacaattaaattatggagaagtggagtgtccggggttcgaaccccggcccctgcatataatatgcaat 17545213  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||  |||||||    
T  17545214 atccctaccaactgagctaagctca 17545238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 17666106 - 17666010
Alignment:
Q  147 ctcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagtgaagctca 243  Q
    |||||||| ||||| | | |||| ||||||||||||  |||||||| ||||||||| | ||||||||| ||||| |||| ||||||||  |||||||    
T  17666106 ctcacacaatttaattgtggagaggtggagtatccggggttcgaaccctgacccctgcatataatatgcaatattcctaccaactgagctaagctca 17666010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 32392073 - 32392180
Alignment:
Q  124 atcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacc 223  Q
    |||||||||  | |||| |||| ||| || |||||||||||  |||||| | || |||||||||| ||| |||| |||||||||||||||| ||||| ||    
T  32392073 atcaagtagtctggtgactagagctcccatattttaaatatgaagaagtagggtgtccgaagttcaaactctgatccctacgtataatatgcaatatccc 32392172  T
Q  224 tatcaact 231  Q
    || |||||    
T  32392173 taccaact 32392180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 244
Target Start/End: Complemental strand, 41156450 - 41156331
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||| |||| |||||||  ||||| | | |||||||||||| |||| ||||||||| | | | ||| | ||||||||| ||||| |||    
T  41156450 tcaagtagcctagtgactagagctcacacgatttaattgtggagaagtggagtgtccggagttcgaaccccggctcctgcatataatatgcaatatccct 41156351  T
Q  225 atcaactgagtgaagctcat 244  Q
    |||||| |||  ||||||||    
T  41156350 atcaaccgagctaagctcat 41156331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 251
Target Start/End: Complemental strand, 8968871 - 8968745
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  8968871 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 8968772  T
Q  225 atcaactgagtgaagctcatggagata 251  Q
    | ||||||||  ||||||| |||||||    
T  8968771 accaactgagctaagctcacggagata 8968745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 665 - 703
Target Start/End: Complemental strand, 9226478 - 9226440
Alignment:
Q  665 tgttatttgaacaaccaatttggttgataacttttgtga 703  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  9226478 tgttatttgaacaaccaatttggttgacaacttttgtga 9226440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 233
Target Start/End: Original strand, 36888337 - 36888451
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | ||| ||| | ||||||||| |||    
T  36888337 tttttgtcaagtagcttagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaat 36888436  T
Q  219 atacctatcaactga 233  Q
    || |||| |||||||    
T  36888437 atccctaccaactga 36888451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 39804417 - 39804471
Alignment:
Q  148 tcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccct 202  Q
    ||||||||||||||| |||||||||||||| || ||||||||||| ||| |||||    
T  39804417 tcacacattttaaatgtagagaagtggagtgtctgaagttcgaactctggcccct 39804471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 5900419 - 5900296
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||||||||||||| ||||  ||||| |||||||| || || | | |||||||||| | ||||  |||||||| | | ||||| | ||||||||| |||    
T  5900419 tttttatcaagtagcctagtagttagagctcacacaattaaattgtggagaagtggaatgtccggggttcgaac-ccggcccctgcatataatatgcaat 5900321  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||| |||||||    
T  5900320 atccctaccaactgagttaagctca 5900296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 9835161 - 9835037
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| |||    
T  9835161 tttttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaat 9835062  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||  |||||||    
T  9835061 atccctaccaactgagctaagctca 9835037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 11146471 - 11146595
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||| ||||| ||||| ||||| |||||||| || || | | |||||||||||| ||||  |||||||| |  |||||||| ||||| ||| |||    
T  11146471 tttttgtcatgtagcctagtggttagagctcacacaattgaactgtggagaagtggagtgtccggggttcgaactccaacccctacatataacatgcaat 11146570  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || | |||||||||||  |||||||    
T  11146571 atccttatcaactgagctaagctca 11146595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 286 - 366
Target Start/End: Original strand, 12295707 - 12295787
Alignment:
Q  286 tttttaatttcatttaataaatggtgtatctgatttttaatatagactagataaattatttattgaatgaacctacaaagt 366  Q
    ||||||| || |||||||||||  ||||| |  ||| |||||||||||| ||| ||||||||||||||||| ||| |||||    
T  12295707 tttttaaatttatttaataaattatgtatgtcgtttataatatagactacatacattatttattgaatgaatctaaaaagt 12295787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 29154970 - 29154847
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  ||||||||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||||| ||||||||| | |    
T  29154970 tttttgtcaagtagcgtagtggctagaactcacacaatttaattgtggagaagtggagtgtccggggttcgaac-ccggctcctacatataatatgcact 29154872  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||  |||||||    
T  29154871 atccctaccaactgagctaagctca 29154847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 32706450 - 32706326
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| || ||| |||| |||||||| ||||| | | |||||||||||| ||||  |||||||  | | | ||| | |||||||||||||    
T  32706450 tttttgtcaagtagcctaatgactagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaatcccggctcctccatataatatgtaat 32706351  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||  |||||||    
T  32706350 atccctaccaactgagctaagctca 32706326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 235
Target Start/End: Complemental strand, 33383701 - 33383585
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| || |||||| ||||| ||||| |||||||||||||||| | |||||||| | |||||||  ||| ||| |  ||| |||| |||||||| ||||    
T  33383701 tttttttctagtagcttagtggttagagctcacacattttaaatgttgagaagtgaaatatccgatattcaaaccccaacctctacatataatatataat 33383602  T
Q  219 atacctatcaactgagt 235  Q
    ||  ||| |||||||||    
T  33383601 atctctaccaactgagt 33383585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 251
Target Start/End: Complemental strand, 33999180 - 33999056
Alignment:
Q  127 aagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctat 226  Q
    ||||||| |||||  ||||||||||| | ||||| | | ||||| |||||| ||||  |||||||| |  |||||||| ||||| |||||||||   ||     
T  33999180 aagtagcctagtggctagaactcacataatttaactgtggagaaatggagtgtccggggttcgaaccccaacccctacatataaaatgtaatatcgttac 33999081  T
Q  227 caactgagtgaagctcatggagata 251  Q
    ||||||||| ||||| |||||||||    
T  33999080 caactgagttaagctaatggagata 33999056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 7545340 - 7545435
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatg 214  Q
    ||||| ||||||| ||||||| ||||  |||||||||||||||| | ||||||||| || ||||   ||||||  ||||||||| | |||||||||    
T  7545340 tttttgtcaagtaacatagtggttagcgctcacacattttaaatgtggagaagtggggtgtccgggattcgaatcctgacccctgcatataatatg 7545435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 17967416 - 17967353
Alignment:
Q  294 ttcatttaataaatggtgtatctgatttttaatatagactagataaattatttattgaatgaac 357  Q
    |||||| |||||||| ||||| || | |||||||||||| | ||| ||||||||||||||||||    
T  17967416 ttcattcaataaatgatgtatgtggtctttaatatagacaacatacattatttattgaatgaac 17967353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 20719866 - 20719755
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| |||| |||| ||||| ||||| |||||||| ||||| |   |||||||||| | | ||| |||||||| ||||||||||| ||||| ||| |||    
T  20719866 tttttttcaaatagcctagtggttagagctcacacaatttaattgcggagaagtggaatgttcgaggttcgaactctgacccctacatataaaatgcaat 20719767  T
Q  219 atacctatcaac 230  Q
    || |||| ||||    
T  20719766 atccctaccaac 20719755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 31074114 - 31074193
Alignment:
Q  164 tagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagtgaagctca 243  Q
    |||||||||||||||| ||  |||||||| | | | ||||| ||||| ||||||||| |||| ||||||||| |||||||    
T  31074114 tagagaagtggagtattcggggttcgaaccccggctcctacatataaaatgtaatatccctaccaactgagttaagctca 31074193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 43328397 - 43328266
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| |||||||||||| ||| ||||  ||||||| || || | |||||||||||||| || || |||| ||| | |  || ||| ||||||||  |||    
T  43328397 tttttgtcaagtagcataatgactagagttcacacaattcaattgtagagaagtggagtgtctgaggttcaaactccggaccttacatataatatacaat 43328298  T
Q  219 atacctatcaactgagtgaagctcatggagat 250  Q
    ||  ||| ||||||||| ||||||||||||||    
T  43328297 atctctaccaactgagttaagctcatggagat 43328266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 4745824 - 4745942
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  4745824 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctccttcatataatatgcaatatccct 4745923  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  4745924 accaactgagctaagctca 4745942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 11897370 - 11897252
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||  |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | ||| ||| | ||||||||| ||||| |||    
T  11897370 tcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatccct 11897271  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  11897270 accaactgagctaagctca 11897252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 12463878 - 12463760
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  12463878 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 12463779  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  12463778 accaactgagctaagctca 12463760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 4153652 - 4153559
Alignment:
Q  142 tagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagt 235  Q
    |||| |||||||| ||||| | | ||||||| |||| |||||||||||||| |  |||| ||| ||||| ||| ||||| |||| |||||||||    
T  4153652 tagagctcacacaatttaattgtggagaagtagagtgtccgaagttcgaaccccaacccatacatataaaatgcaatatccctaccaactgagt 4153559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 173
Target Start/End: Original strand, 5195112 - 5195141
Alignment:
Q  144 gaactcacacattttaaatatagagaagtg 173  Q
    ||||||||||||||||||||||||||||||    
T  5195112 gaactcacacattttaaatatagagaagtg 5195141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 244
Target Start/End: Original strand, 16386683 - 16386808
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||  |||||  |||| |||||||| ||||| | | |||||||||||||||||  |||||||| |   | ||| | ||||||||| |||    
T  16386683 tttttgtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggagtatccggggttcgaaccccagctcctgcatataatatgcaat 16386782  T
Q  219 atacctatcaactgagtgaagctcat 244  Q
    || |||| ||||||||  ||||||||    
T  16386783 atccctaccaactgagctaagctcat 16386808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 246
Target Start/End: Original strand, 17175015 - 17175120
Alignment:
Q  141 ttagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagtgaagc 240  Q
    ||||| |||||||| | ||| | | |||||||||||| ||||| |||||||| | | ||||| | ||||| ||| ||||| |||| ||||||||| || |    
T  17175015 ttagatctcacacaatataattgtggagaagtggagtgtccgaggttcgaaccccggcccctgcatataacatgcaatatccctaccaactgagttaaac 17175114  T
Q  241 tcatgg 246  Q
    ||||||    
T  17175115 tcatgg 17175120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 18261655 - 18261610
Alignment:
Q  340 attatttattgaatgaacctacaaagtgaactttctcttataatag 385  Q
    ||||||||||||||||| ||| ||||||||||||  ||||||||||    
T  18261655 attatttattgaatgaatctataaagtgaacttttgcttataatag 18261610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 234
Target Start/End: Original strand, 25400315 - 25400424
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  25400315 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 25400414  T
Q  225 atcaactgag 234  Q
    | ||||||||    
T  25400415 accaactgag 25400424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 36564364 - 36564437
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaac 192  Q
    ||||| ||||||| |||||||| | || |||||||||||||||||| |||| |||| || ||||  ||||||||    
T  36564364 tttttgtcaagtaacatagtgactggagctcacacattttaaatatggagaggtggggtgtccgtggttcgaac 36564437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 232
Target Start/End: Original strand, 41319393 - 41319506
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||  |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | ||||||| | ||||| ||| |||    
T  41319393 tttttgtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaactccgacccctgcatataaaatgcaat 41319492  T
Q  219 atacctatcaactg 232  Q
    || |||| ||||||    
T  41319493 atccctaccaactg 41319506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 2e-20; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 142 - 245
Target Start/End: Original strand, 29559639 - 29559742
Alignment:
Q  142 tagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagtgaagct 241  Q
    ||||||||||||||||||||| | ||||||||| || |||||||||| ||| | |||| |||| ||||||||| ||||| |||| ||||||||| |||||    
T  29559639 tagaactcacacattttaaatgtggagaagtggggtgtccgaagttcaaaccccgacctctacatataatatgcaatatccctaccaactgagttaagct 29559738  T
Q  242 catg 245  Q
    ||||    
T  29559739 catg 29559742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 19591521 - 19591645
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| ||| |||| ||||| ||| |||||||||||| ||||  |||||||| | | | ||||| ||||||||| |||    
T  19591521 tttttgtcaagtagcctagtggctagagctctcacaatttaattatggagaagtggagtgtccggggttcgaaccccggctcctacatataatatgcaat 19591620  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    |||| |||||||||||  |||||||    
T  19591621 atacttatcaactgagctaagctca 19591645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 50659718 - 50659594
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||||||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | ||||| | ||||| |||| ||    
T  50659718 tttttatcaagtagcttagtggctagagctcacacaatttaattgtcgagaagtggagtgtccggggttcgaaccccggcccctgcatataaaatgtgat 50659619  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||| |||||||    
T  50659618 atccctaccaactgagttaagctca 50659594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 246
Target Start/End: Original strand, 49194642 - 49194761
Alignment:
Q  127 aagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctat 226  Q
    |||||||||||||  |||| |||||||| || || | | |||||||| ||| ||||  |||||||| ||||||||||| ||||||||| ||||| ||||     
T  49194642 aagtagcatagtggctagagctcacacaattaaattgtggagaagtgaagtgtccggggttcgaaccctgacccctacatataatatgcaatattcctac 49194741  T
Q  227 caactgagtgaagctcatgg 246  Q
    ||| ||||| ||| ||||||    
T  49194742 caattgagttaagttcatgg 49194761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 12894495 - 12894596
Alignment:
Q  142 tagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagtgaagct 241  Q
    |||| |||||||| ||||| | | |||||||| |||||||||||||||||| | | || |||| ||||| ||| ||||| |||| ||||||||| |||||    
T  12894495 tagagctcacacaatttaattgtggagaagtgaagtatccgaagttcgaaccccggcctctacatataaaatgcaatatccctaccaactgagttaagct 12894594  T
Q  242 ca 243  Q
    ||    
T  12894595 ca 12894596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 15975280 - 15975156
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| ||||| ||||| |||||||| ||||| | |  ||||||||||| ||||| |||||||| | | | ||| | ||||||||| |||    
T  15975280 tttttttcaagtagcctagtggttagagctcacacaatttaattgtgaagaagtggagtgtccgaggttcgaaccccggctcctgcatataatatgcaat 15975181  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||  |||||||    
T  15975180 atccctaccaactgagctaagctca 15975156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 45701472 - 45701348
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||||||||  |||||||| | | | ||| | ||||||||| |||    
T  45701472 tttttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtatccggggttcgaaccccggctcctgcatataatatgcaat 45701373  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||  |||||||    
T  45701372 atccctaccaactgagctaagctca 45701348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 47098860 - 47098736
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||||||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| || |  |||||||| | | ||||| | ||||||||| |||    
T  47098860 tttttatcaagtagcttagtggctagagctcacacaatttaattgtggagaagtggagtgtctggggttcgaaccccggcccctgcatataatatgcaat 47098761  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||  |||||||    
T  47098760 atccctaccaactgagctaagctca 47098736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 7938243 - 7938362
Alignment:
Q  125 tcaagtagcatagtgattagaactcacaca-ttttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacc 223  Q
    ||||||||| || ||| ||||  ||||||| |||||| | | |||||||||||| || |  |||||||| | ||||||||| ||||| ||||||||| ||    
T  7938243 tcaagtagcctaatgactagagttcacacaattttaattgtggagaagtggagtgtctggggttcgaaccccgacccctacatataaaatgtaatatccc 7938342  T
Q  224 tatcaactgagtgaagctca 243  Q
    || ||||||||| |||||||    
T  7938343 taccaactgagttaagctca 7938362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 219
Target Start/End: Original strand, 40739159 - 40739253
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaata 219  Q
    ||||||||  |||||  |||| ||||||||||||||| || ||||||||  || |||||||||||||| |  |||||| | ||||||||||||||    
T  40739159 tcaagtagtctagtggctagagctcacacattttaaacatggagaagtgaggtgtccgaagttcgaacccaaacccctgcatataatatgtaata 40739253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 234
Target Start/End: Original strand, 10176851 - 10176960
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    |||||||||||||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  10176851 tcaagtagcatagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 10176950  T
Q  225 atcaactgag 234  Q
    | ||||||||    
T  10176951 accaactgag 10176960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 10349528 - 10349456
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaa 191  Q
    ||||| ||||||||| ||||| ||||| |||||||| ||||| | | |||||||||||| ||||| |||||||    
T  10349528 tttttgtcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccgaggttcgaa 10349456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 11820132 - 11820008
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||  |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | ||| ||||| ||||| ||| |||    
T  11820132 tttttgtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggagtttccggggttcgaaccccgactcctacatataacatgcaat 11820033  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||  |||||||    
T  11820032 atccctaccaactgagctaagctca 11820008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 234
Target Start/End: Original strand, 4640422 - 4640537
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| ||||||||||| |||||||| ||||| | |  ||||||||||| | ||| |||||||| |   | ||| | ||||||||| |||    
T  4640422 tttttgtcaagtagcctagtgattagagctcacacaatttaattgtgaagaagtggagtgttcgaggttcgaaccccagctcctgcatataatatgcaat 4640521  T
Q  219 atacctatcaactgag 234  Q
    || |||| ||||||||    
T  4640522 atccctaccaactgag 4640537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 4807991 - 4808042
Alignment:
Q  123 tatcaagtagcatagtgattagaactcacacattttaaatatagagaagtgg 174  Q
    ||||||||||  ||||| ||||| |||||||||||||||| |||||||||||    
T  4807991 tatcaagtagtctagtggttagagctcacacattttaaatgtagagaagtgg 4808042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 25994536 - 25994587
Alignment:
Q  141 ttagaactcacacattttaaatatagagaagtggagtatccgaagttcgaac 192  Q
    ||||| || ||||||||||||||||||||| |||||| ||||| ||||||||    
T  25994536 ttagagcttacacattttaaatatagagaaatggagtgtccgatgttcgaac 25994587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 26942881 - 26942766
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| || ||  |||| |||||||| ||||| | ||||||||||| || || |  |||||||| ||| ||||| | ||||||||| |||    
T  26942881 tttttgtcaagtagcctaatggctagagctcacacaatttaattgtagagaagtggggtgtctgcggttcgaaccctggcccctgcatataatatgcaat 26942782  T
Q  219 atacctatcaactgag 234  Q
    || |||| ||||||||    
T  26942781 atccctaccaactgag 26942766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 4139122 - 4139004
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  4139122 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 4139023  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  4139022 accaactgagctaagctca 4139004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 7270077 - 7269959
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| |||| ||||||||| |   | ||| | ||||||||| ||||| |||    
T  7270077 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggagttcgaaccccagctcctgcatataatatgcaatatccct 7269978  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  7269977 accaactgagctaagctca 7269959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 157
Target Start/End: Original strand, 9326404 - 9326442
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattt 157  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  9326404 tttttatcaagtagcttagtgattagagctcacacattt 9326442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 17608267 - 17608385
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  ||||||||||||| || || | | |||||||||||| |||   |||||||| | | ||||| | ||||||||| ||||| |||    
T  17608267 tcaagtagcctagtggctagaactcacacaattaaattgtggagaagtggagtgtccagggttcgaaccccggcccctgcatataatatgcaatatccct 17608366  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||| ||| |||||||    
T  17608367 accaactaagttaagctca 17608385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 665 - 703
Target Start/End: Complemental strand, 20080250 - 20080212
Alignment:
Q  665 tgttatttgaacaaccaatttggttgataacttttgtga 703  Q
    |||| ||||||||||||||||||||||||| ||||||||    
T  20080250 tgttttttgaacaaccaatttggttgataatttttgtga 20080212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 31327449 - 31327567
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  31327449 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtttccggggttcgaaccccggctcctgcatataatatgcaatatccct 31327548  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  31327549 accaactgagctaagctca 31327567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 37800559 - 37800677
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  37800559 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 37800658  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  37800659 accaactgagctaagctca 37800677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 253
Target Start/End: Complemental strand, 40192283 - 40192150
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| |||| |||||| |||  ||||||||||||| || |||| | |||||||||||| ||||   ||||||| | |||| || | ||||||||| |||    
T  40192283 tttttgtcaattagcatggtgcctagaactcacacaatt-aaatgtggagaagtggagtgtccgggattcgaacaccgacctctgcatataatatgcaat 40192185  T
Q  219 atacctatcaactgagtgaagctcatggagatacc 253  Q
    || |||| ||||||||  ||||||| || ||||||    
T  40192184 atccctaccaactgagctaagctcacggggatacc 40192150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 40933779 - 40933897
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  40933779 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 40933878  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  40933879 accaactgagctaagctca 40933897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 50496762 - 50496880
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  50496762 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 50496861  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  50496862 accaactgagctaagctca 50496880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 52974001 - 52974119
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    |||||||||  ||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  52974001 tcaagtagcccagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 52974100  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||| |||||||    
T  52974101 accaactgagttaagctca 52974119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 54726156 - 54726090
Alignment:
Q  294 ttcatttaataaatggtgtatctgatttttaatatagactagataaattatttattgaatgaaccta 360  Q
    |||||||||| |||| | ||| |||||| |||||||||| | ||| |||||| ||||||||||||||    
T  54726156 ttcatttaattaatgatatatgtgatttataatatagaccacatatattattaattgaatgaaccta 54726090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 234
Target Start/End: Original strand, 10482801 - 10482910
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| |||| ||||||||| |   | ||| | ||||||||| ||||| |||    
T  10482801 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggagttcgaaccccagctcctgcatataatatgcaatatccct 10482900  T
Q  225 atcaactgag 234  Q
    | ||||||||    
T  10482901 accaactgag 10482910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 234
Target Start/End: Complemental strand, 18194460 - 18194351
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  18194460 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 18194361  T
Q  225 atcaactgag 234  Q
    | ||||||||    
T  18194360 accaactgag 18194351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 244
Target Start/End: Original strand, 36625113 - 36625238
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||||||||||||  | |||  |||| |||||||| ||||| | || ||||||||||| | || ||||||||| |  || ||| | ||||||||| |||    
T  36625113 tttttatcaagtagttttgtggctagagctcacacaatttaactgtaaagaagtggagtgttcggagttcgaaccccaactcctgcatataatatgcaat 36625212  T
Q  219 atacctatcaactgagtgaagctcat 244  Q
    || |||| ||||||||  ||||||||    
T  36625213 atccctaccaactgagctaagctcat 36625238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 52984115 - 52984014
Alignment:
Q  142 tagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagtgaagct 241  Q
    |||| |||||||| ||||| | |||||||||||||| ||||  |||||||| | ||||| | | || |||||| ||||| |||| ||||||||  |||||    
T  52984115 tagagctcacacaatttaattgtagagaagtggagtgtccggggttcgaaccccgacccttgcatacaatatgcaatatccctaccaactgagctaagct 52984016  T
Q  242 ca 243  Q
    ||    
T  52984015 ca 52984014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 2e-20; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 283 - 386
Target Start/End: Complemental strand, 43543030 - 43542927
Alignment:
Q  283 cattttttaatttcatttaataaatggtgtatctgatttttaatatagactagataaattatttattgaatgaacctacaaagtgaactttctcttataa 382  Q
    |||||||||  |||||| |||||||| |||||||  || |||||||| |||||||  || |||||||||||||| ||| |||||||||||||||||||||    
T  43543030 cattttttaggttcattcaataaatgatgtatctcgttcttaatataaactagatgcatcatttattgaatgaatctaaaaagtgaactttctcttataa 43542931  T
Q  383 taga 386  Q
    ||||    
T  43542930 taga 43542927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 119 - 251
Target Start/End: Complemental strand, 43936829 - 43936697
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||  ||||| ||||| |||||||| ||||| | | ||||||||||||||||||| ||||||| ||||||||| | ||||| |||  ||    
T  43936829 tttttgtcaagtagtttagtggttagagctcacacaatttaattgtggagaagtggagtatccgaacttcgaaccctgacccctgcatataaaatgcgat 43936730  T
Q  219 atacctatcaactgagtgaagctcatggagata 251  Q
    || |||| ||||||||  ||||||| |||||||    
T  43936729 atccctaccaactgagctaagctcacggagata 43936697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 2289738 - 2289614
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| ||||| |||||||||||||| || || | | |||||| ||||| |||   |||||||| ||||||||| | ||||||||| |||    
T  2289738 tttttgtcaagtagcctagtggttagaactcacacaattaaattgtggagaaggggagtgtccagggttcgaaccctgacccctgcatataatatgcaat 2289639  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||  |||||||    
T  2289638 attcctaccaactgagctaagctca 2289614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 313 - 382
Target Start/End: Complemental strand, 13021787 - 13021718
Alignment:
Q  313 atctgatttttaatatagactagataaattatttattgaatgaacctacaaagtgaactttctcttataa 382  Q
    |||| ||| ||||||||||||||||| || ||||||| |||||| ||| ||||| |||||||||||||||    
T  13021787 atctaattcttaatatagactagatacataatttattaaatgaatctaaaaagttaactttctcttataa 13021718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 305 - 386
Target Start/End: Complemental strand, 22451020 - 22450939
Alignment:
Q  305 aatggtgtatctgatttttaatatagactagataaattatttattgaatgaacctacaaagtgaactttctcttataataga 386  Q
    |||| ||||||| |||  ||||||||| |||||| || |||||||||||||| ||| ||||| |||||||||| ||||||||    
T  22451020 aatgatgtatctaattcctaatatagagtagatacatcatttattgaatgaatctataaagtaaactttctctgataataga 22450939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 336 - 397
Target Start/End: Original strand, 43714129 - 43714190
Alignment:
Q  336 ataaattatttattgaatgaacctacaaagtgaactttctcttataatagaaaccaaaatag 397  Q
    |||||| |||||||||||||| ||| |||||||| |||||||||||||||| |||| |||||    
T  43714129 ataaatcatttattgaatgaatctaaaaagtgaattttctcttataatagagaccagaatag 43714190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 45119680 - 45119765
Alignment:
Q  150 acacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagt 235  Q
    ||||||||||||||| ||||| |||||| ||||| |||||||| | ||||||| | |||||||||||| || | || |||||||||    
T  45119680 acacattttaaatatggagaaatggagtgtccgaggttcgaactccgacccctgcatataatatgtaaaattcataccaactgagt 45119765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 11050699 - 11050823
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||| | |||||  |||| |||||||| ||||| ||| ||||||||| || |||| ||||||||| |   ||||| | |||||||||||||    
T  11050699 tttttgtcaagtaacctagtggctagagctcacacaatttaattatggagaagtggggtgtccggagttcgaaccccagcccctgcatataatatgtaat 11050798  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||  |||||||    
T  11050799 atccctaccaactgagctaagctca 11050823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 36547373 - 36547445
Alignment:
Q  287 ttttaatttcatttaataaatggtgtatctgatttttaatatagactagataaattatttattgaatgaacct 359  Q
    |||||| ||||||||||||||| ||||| |||| |||||||||||  | ||| || |||||||||||||||||    
T  36547373 ttttaaattcatttaataaatgatgtatgtgatctttaatatagatcacatacatcatttattgaatgaacct 36547445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 36748986 - 36748891
Alignment:
Q  147 ctcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagtgaagctca 243  Q
    |||||||||||||||| | |||||||||||| | |||||||||||| | ||||||| | | ||||||| ||| | |||| ||||||||| |||||||    
T  36748986 ctcacacattttaaatgtggagaagtggagtgttcgaagttcgaaccccgacccctgcat-taatatgcaatgtccctaccaactgagttaagctca 36748891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 7717575 - 7717630
Alignment:
Q  147 ctcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccct 202  Q
    |||||||||||||||| | |||||||||||| |||||||||||||| | |||||||    
T  7717575 ctcacacattttaaatgtggagaagtggagtgtccgaagttcgaaccccgacccct 7717630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 213
Target Start/End: Complemental strand, 13773528 - 13773434
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatat 213  Q
    ||||| ||||||||| ||||| ||||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | ||| ||||| ||||||||    
T  13773528 tttttgtcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctacatataatat 13773434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 14518412 - 14518339
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaac 192  Q
    ||||||||| ||||| |||||  | || |||||||||||||||||| |||||||||||| | ||| ||||||||    
T  14518412 tttttatcaggtagcctagtggctggagctcacacattttaaatatggagaagtggagtgttcgaggttcgaac 14518339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 30435335 - 30435230
Alignment:
Q  286 tttttaatttcatttaataaatggtgtatctgatttttaatatagactagataaattatttattgaatgaacctacaaagtgaactttctcttataatag 385  Q
    ||||||| || || ||||||||| ||||| | |||| || ||  ||||| ||| || ||||||||||| || ||| ||| |||||||| |||||||||||    
T  30435335 tttttaagtttatctaataaatgatgtatttaatttatattagggactaaatacatcatttattgaataaatctaaaaaatgaactttatcttataatag 30435236  T
Q  386 aaacca 391  Q
    ||||||    
T  30435235 aaacca 30435230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 32609176 - 32609261
Alignment:
Q  166 gagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagtgaagctcatggagata 251  Q
    |||||||||||| |||| ||||||||| | ||| | | | ||||||||| ||||| |||| ||||||||| ||||||| |||||||    
T  32609176 gagaagtggagtgtccggagttcgaaccccgactcttgcatataatatgcaatatccctaccaactgagttaagctcacggagata 32609261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 40691229 - 40691148
Alignment:
Q  301 aataaatggtgtatctgatttttaatatagactagataaattatttattgaatgaacctacaaagtgaactttctcttataa 382  Q
    |||||||| |||||||  ||| ||||||||||||||||  | |||||||||||| | ||| ||||| |||||||| ||||||    
T  40691229 aataaatgatgtatctagtttctaatatagactagatacgtcatttattgaatggatctaaaaagttaactttcttttataa 40691148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 250
Target Start/End: Complemental strand, 41509638 - 41509513
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  41509638 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 41509539  T
Q  225 atcaactgagtgaagctcatggagat 250  Q
    | ||||||||  ||||||| ||||||    
T  41509538 accaactgagctaagctcacggagat 41509513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 334 - 383
Target Start/End: Original strand, 43542997 - 43543046
Alignment:
Q  334 agataaattatttattgaatgaacctacaaagtgaactttctcttataat 383  Q
    ||||| || |||||||||||||||||| ||| ||||||||||||||||||    
T  43542997 agatacatcatttattgaatgaacctaaaaaatgaactttctcttataat 43543046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 665 - 697
Target Start/End: Complemental strand, 7648567 - 7648535
Alignment:
Q  665 tgttatttgaacaaccaatttggttgataactt 697  Q
    |||||||||||||||||||||||||||||||||    
T  7648567 tgttatttgaacaaccaatttggttgataactt 7648535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 251
Target Start/End: Complemental strand, 17601207 - 17601075
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| ||||| ||||| |||||| | || || | | |||||||||||| |||   |||||||| | ||||||| | ||| ||||| |||    
T  17601207 tttttgtcaagtagcgtagtggttagagctcacataattaaattgtggagaagtggagtgtccatggttcgaactccgacccctgcatatgatatgcaat 17601108  T
Q  219 atacctatcaactgagtgaagctcatggagata 251  Q
    || |||| ||||||||| ||| ||| |||||||    
T  17601107 atccctaccaactgagttaagttcacggagata 17601075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 2643825 - 2643710
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| |||    
T  2643825 tttttgtcaagtagcttagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaat 2643726  T
Q  219 atacctatcaactgag 234  Q
    || |||| ||||||||    
T  2643725 atccctaccaactgag 2643710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 33587217 - 33587122
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatg 214  Q
    ||||| ||||||||  |||||| |||| |||||| ||||||||||| ||||||||| || ||||  ||| ||||   ||||||||| |||||||||    
T  33587217 tttttctcaagtagtctagtgactagagctcacatattttaaatatggagaagtggggtgtccggggtttgaacctcgacccctacatataatatg 33587122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 333 - 383
Target Start/End: Complemental strand, 11226014 - 11225964
Alignment:
Q  333 tagataaattatttattgaatgaacctacaaagtgaactttctcttataat 383  Q
    |||||| || |||||||||| ||| ||||||||||||| ||||||||||||    
T  11226014 tagatacatcatttattgaacgaaactacaaagtgaacgttctcttataat 11225964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 663 - 697
Target Start/End: Original strand, 11384906 - 11384940
Alignment:
Q  663 aatgttatttgaacaaccaatttggttgataactt 697  Q
    ||||||||||||||||||||||||||||| |||||    
T  11384906 aatgttatttgaacaaccaatttggttgacaactt 11384940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 18862380 - 18862322
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagt 177  Q
    ||||| ||||||||| |||||  |||| |||||||||||||||| | ||||||||||||    
T  18862380 tttttgtcaagtagcctagtggctagagctcacacattttaaatgtggagaagtggagt 18862322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 20296540 - 20296422
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| | |    
T  20296540 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatcctt 20296441  T
Q  225 atcaactgagtgaagctca 243  Q
    ||||||||||  |||||||    
T  20296440 atcaactgagctaagctca 20296422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 340 - 386
Target Start/End: Complemental strand, 33407449 - 33407403
Alignment:
Q  340 attatttattgaatgaacctacaaagtgaactttctcttataataga 386  Q
    |||||||||||||||||| || ||||| || ||||||||||||||||    
T  33407449 attatttattgaatgaacttaaaaagtaaattttctcttataataga 33407403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 36182764 - 36182646
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| ||||| ||||| |||||||| ||||| | | |||||||||||| ||||  |||||||| |   | ||| | ||||||||| ||||| |||    
T  36182764 tcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaacccctgctcctgcatataatatgcaatatccct 36182665  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  36182664 accaactgagctaagctca 36182646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 40535397 - 40535515
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | ||||| | ||||||||| ||||| | |    
T  40535397 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggcccctgcatataatatgcaatatccgt 40535496  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  40535497 accaactgagctaagctca 40535515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 1e-18; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 34040548 - 34040432
Alignment:
Q  127 aagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctat 226  Q
    ||||||| |||||  ||||||||||||| | ||| ||| |||||||||||| |||| ||||||||| ||||||||||| ||||| ||| |||||  ||||    
T  34040548 aagtagcctagtggctagaactcacacaatataattatggagaagtggagtgtccggagttcgaaccctgacccctacatataaaatgcaatatttctat 34040449  T
Q  227 caactgagtgaagctca 243  Q
    ||||||||  |||||||    
T  34040448 caactgagctaagctca 34040432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 114 - 246
Target Start/End: Original strand, 10417158 - 10417290
Alignment:
Q  114 ctttctttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatat 213  Q
    |||| ||||| ||||||||  |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| ||||| ||| | ||||||||    
T  10417158 ctttttttttgtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccctgactcctgcatataatat 10417257  T
Q  214 gtaatatacctatcaactgagtgaagctcatgg 246  Q
    ||||||| |||| ||||||||  ||||||||||    
T  10417258 gtaatatccctaccaactgagctaagctcatgg 10417290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 42231640 - 42231516
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||| |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| |||    
T  42231640 tttttgtcaagtagcctagtgactagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaat 42231541  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||| |||||||    
T  42231540 attcctaccaactgagttaagctca 42231516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 8965216 - 8965098
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| ||||| ||||| |||||||| ||||| | ||||||||||| || ||||  |||||||| | | ||||| | ||||||||| ||||| |||    
T  8965216 tcaagtagcctagtggttagagctcacacaatttaattgtagagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccct 8965117  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  8965116 accaactgagctaagctca 8965098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 33530921 - 33530815
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| || || ||| |||||||||||||||||  |||||||| | || |||||| ||||||||| |||    
T  33530921 tttttgtcaagtagcctagtggctagagctcacacaattcaattatggagaagtggagtatccggggttcgaaccccgatccctacatataatatgcaat 33530822  T
Q  219 ataccta 225  Q
    || ||||    
T  33530821 atcccta 33530815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 234
Target Start/End: Original strand, 15064139 - 15064259
Alignment:
Q  114 ctttctttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatat 213  Q
    |||| ||||| ||||||||  |||||  |||| |||||||| ||||| ||| |||||||||||||||||  ||||||||   ||| ||| | ||||||||    
T  15064139 ctttttttttgtcaagtagtttagtggctagagctcacacaatttaattatggagaagtggagtatccggggttcgaacctcgactcctgcatataatat 15064238  T
Q  214 gtaatatacctatcaactgag 234  Q
    | ||||| |||| ||||||||    
T  15064239 gcaatattcctaccaactgag 15064259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 234
Target Start/End: Original strand, 1457968 - 1458075
Alignment:
Q  127 aagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctat 226  Q
    ||||||| ||||| ||||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||||    
T  1457968 aagtagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccctat 1458067  T
Q  227 caactgag 234  Q
    ||||||||    
T  1458068 caactgag 1458075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 42218878 - 42218763
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  || | |||||||| || || | | |||||||||||| |||| ||||||||| |   ||||||||||||||||| |||    
T  42218878 tttttgtcaagtagcctagtggctaaagctcacacaattaaattgtggagaagtggagtgtccggagttcgaaccccagcccctacgtataatatgcaat 42218779  T
Q  219 atacctatcaactgag 234  Q
    || |||| ||||||||    
T  42218778 atccctaccaactgag 42218763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 665 - 703
Target Start/End: Original strand, 9362572 - 9362610
Alignment:
Q  665 tgttatttgaacaaccaatttggttgataacttttgtga 703  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  9362572 tgttatttgaacaaccaatttagttgataacttttgtga 9362610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 233
Target Start/End: Original strand, 10042360 - 10042474
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| ||||| |||||  ||||||| ||||| | |  | |||||||||||||| | ||||||| | ||| ||||| ||||||||| |||    
T  10042360 tttttgtcaagtagcctagtggttagagttcacacaatttaattgtgaaaaagtggagtatccggaattcgaactccgactcctacatataatatgcaat 10042459  T
Q  219 atacctatcaactga 233  Q
    || |||| |||||||    
T  10042460 atccctaccaactga 10042474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 294 - 356
Target Start/End: Original strand, 19596037 - 19596099
Alignment:
Q  294 ttcatttaataaatggtgtatctgatttttaatatagactagataaattatttattgaatgaa 356  Q
    ||||||||||||||| ||||| ||||||||||||||||  | ||| || ||||||||||||||    
T  19596037 ttcatttaataaatgatgtatttgatttttaatatagatcatatatatcatttattgaatgaa 19596099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 665 - 703
Target Start/End: Complemental strand, 40609792 - 40609754
Alignment:
Q  665 tgttatttgaacaaccaatttggttgataacttttgtga 703  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  40609792 tgttatttgaacaaccaatttggttgacaacttttgtga 40609754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 235
Target Start/End: Original strand, 48615420 - 48615530
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||| |||| |||||||| ||||| | | |||||||||||||||||  |||||||| | | |  || | ||||||||| ||||| |||    
T  48615420 tcaagtagcctagtgactagagctcacacaatttaattgtggagaagtggagtatccggggttcgaaccccggcttctgcatataatatgcaatatccct 48615519  T
Q  225 atcaactgagt 235  Q
    | |||||||||    
T  48615520 accaactgagt 48615530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 35207161 - 35207226
Alignment:
Q  187 tcgaacgctgacccctacgtataatatgtaatatacctatcaactgagtgaagctcatggagatac 252  Q
    |||||| ||||| ||| | ||||||||| ||||| |||||||||||||| ||||||| ||||||||    
T  35207161 tcgaaccctgactcctgcatataatatgcaatatccctatcaactgagttaagctcacggagatac 35207226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 234
Target Start/End: Complemental strand, 36132351 - 36132242
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| ||||| ||||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | ||| ||| | ||||||||| ||||| |||    
T  36132351 tcaagtagcctagtggttagacctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatattcct 36132252  T
Q  225 atcaactgag 234  Q
    | ||| ||||    
T  36132251 accaattgag 36132242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 220
Target Start/End: Complemental strand, 54029681 - 54029580
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||| |||| |||||||| ||||| | | |||||||||||| ||||   ||||||| | |  |||||| |||||||||||||    
T  54029681 tttttgtcaagtagcctagtgactagagctcacacaatttaattgtggagaagtggagtgtccgggattcgaactccggtccctacatataatatgtaat 54029582  T
Q  219 at 220  Q
    ||    
T  54029581 at 54029580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 166 - 250
Target Start/End: Original strand, 542803 - 542887
Alignment:
Q  166 gagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagtgaagctcatggagat 250  Q
    |||||||||||| |||||||||||||| |   ||||| | || |||||| ||||| |||||||||||||  ||||||| ||||||    
T  542803 gagaagtggagtgtccgaagttcgaaccccagcccctgcatacaatatgcaatatccctatcaactgagctaagctcacggagat 542887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 325 - 373
Target Start/End: Complemental strand, 15660005 - 15659957
Alignment:
Q  325 atatagactagataaattatttattgaatgaacctacaaagtgaacttt 373  Q
    |||||||||| ||| || |||||||||||||||||| ||||||||||||    
T  15660005 atatagactacatacatcatttattgaatgaacctaaaaagtgaacttt 15659957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 39023303 - 39023179
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  ||||||| ||||| || || | | |||||||||||| |||   |||||||| | ||||||| | ||||||||| |||    
T  39023303 tttttgtcaagtagcctagtggctagaacttacacaattaaattgtggagaagtggagtgtccagggttcgaaccccgacccctgcatataatatgcaat 39023204  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||  |||||||    
T  39023203 atccctaccaactgagctaagctca 39023179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 46562771 - 46562699
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaa 191  Q
    ||||| ||||||||  ||||||||||| || ||| ||||||||||| ||||||||| || |||| ||||||||    
T  46562771 tttttgtcaagtagtctagtgattagagcttacatattttaaatatggagaagtggggtgtccggagttcgaa 46562699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 47890815 - 47890707
Alignment:
Q  127 aagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctat 226  Q
    ||||||| ||||| ||||| |||||||| ||||| | | |||||||||||| || |  |||||||| | ||||||| | ||||||||| |||||  |||     
T  47890815 aagtagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtctggggttcgaaccccgacccctgcatataatatgcaatatctctac 47890716  T
Q  227 caactgagt 235  Q
    |||||||||    
T  47890715 caactgagt 47890707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 382
Target Start/End: Complemental strand, 5924611 - 5924512
Alignment:
Q  283 cattttttaatttcatttaataaatggtgtatctgatttttaatatagactagataaattatttattgaatgaacctacaaagtgaactttctcttataa 382  Q
    |||||||||| || ||| |||||||  ||||| |  || |||||||||| |||||| |||||||||||||||||  || ||| | |||||| ||||||||    
T  5924611 cattttttaaatttattgaataaataatgtatgtagttcttaatatagattagatacattatttattgaatgaatttaaaaaattaactttatcttataa 5924512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 17709411 - 17709494
Alignment:
Q  128 agtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataat 211  Q
    |||||| |||||| |||| |||||||| ||||| | |||||||||||||| ||||  |||||||| | | ||||||| ||||||    
T  17709411 agtagcctagtgactagagctcacacaatttaattgtagagaagtggagtgtccggggttcgaactccggcccctacatataat 17709494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 243
Target Start/End: Complemental strand, 18360604 - 18360497
Alignment:
Q  136 agtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagt 235  Q
    |||| |||||||||||||| ||||| | | |||||||||||| ||||  |||||||| | | ||||| | ||||| |||| |||| |||| ||||||||     
T  18360604 agtggttagaactcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggcccctgcatataaaatgtgatatccctaccaactgagc 18360505  T
Q  236 gaagctca 243  Q
     |||||||    
T  18360504 taagctca 18360497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 243
Target Start/End: Original strand, 36602325 - 36602432
Alignment:
Q  136 agtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagt 235  Q
    |||| |||||||||||||| ||||| | | |||||||||||| ||||  |||||||| | | ||||| | ||||| |||| |||| |||| ||||||||     
T  36602325 agtggttagaactcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggcccctgcatataaaatgtgatatccctaccaactgagc 36602424  T
Q  236 gaagctca 243  Q
     |||||||    
T  36602425 taagctca 36602432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 252
Target Start/End: Complemental strand, 43597017 - 43596890
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  43597017 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 43596918  T
Q  225 atcaactgagtgaagctcatggagatac 252  Q
    | ||||||||  ||||||| || |||||    
T  43596917 accaactgagctaagctcacggggatac 43596890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 47929363 - 47929272
Alignment:
Q  129 gtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatat 220  Q
    ||||| |||||  |||| |||||||||||||||| | ||||||||| || ||||| ||||||||   ||||||| | ||||||||| |||||    
T  47929363 gtagcctagtggctagagctcacacattttaaatgtggagaagtggggtttccgaggttcgaacctcgacccctgcatataatatgcaatat 47929272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 55260261 - 55260328
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaac 192  Q
    ||||||||| |||||| || |||||||| ||||||||| | |||||||||||| || || ||||||||    
T  55260261 tcaagtagcttagtgactataactcacatattttaaatgtggagaagtggagtgtcagaggttcgaac 55260328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 2860674 - 2860728
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtg 173  Q
    |||||||||| || |||||||| | || |||||||||||||||||| ||||||||    
T  2860674 tttttatcaaataacatagtgacttgagctcacacattttaaatatggagaagtg 2860728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 3847803 - 3847685
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  ||||||||||||| ||||| | | |||||||||||| ||||  | |||||| | | | ||| | ||||||||| ||||| |||    
T  3847803 tcaagtagcctagtggctagaactcacacaatttaattgtggagaagtggagtgtccggggatcgaaccccggctcctgcatataatatgcaatatccct 3847704  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  3847703 accaactgagctaagctca 3847685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 214
Target Start/End: Original strand, 8089222 - 8089288
Alignment:
Q  148 tcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatg 214  Q
    |||||||| |||||| | ||||| |||||| |||||||||||||| | ||||||| | |||||||||    
T  8089222 tcacacatattaaatgtggagaaatggagtgtccgaagttcgaactccgacccctgcatataatatg 8089288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 294 - 384
Target Start/End: Complemental strand, 11045748 - 11045658
Alignment:
Q  294 ttcatttaataaatggtgtatctgatttttaatatagactagataaattatttattgaatgaacctacaaagtgaactttctcttataata 384  Q
    |||||| ||||| |||||| | || | | |||||||||||| ||| |||| ||||| |||||||||| |||||||| | |||| |||||||    
T  11045748 ttcattgaataactggtgtgtgtggtctataatatagactaaatatattagttattcaatgaacctaaaaagtgaattgtctcatataata 11045658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 294 - 384
Target Start/End: Complemental strand, 11047596 - 11047506
Alignment:
Q  294 ttcatttaataaatggtgtatctgatttttaatatagactagataaattatttattgaatgaacctacaaagtgaactttctcttataata 384  Q
    |||||| ||||| |||||| | || | | |||||||||||| ||| |||| ||||| |||||||||| |||||||| | |||| |||||||    
T  11047596 ttcattgaataactggtgtgtgtggtctataatatagactaaatatattagttattcaatgaacctaaaaagtgaattgtctcatataata 11047506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 252
Target Start/End: Original strand, 11375854 - 11375964
Alignment:
Q  142 tagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagtgaagct 241  Q
    |||| |||||||||||||| | | ||||||||  || ||||  |||||||| | | ||||| | ||||||||| ||||| |||||||||||||  |||||    
T  11375854 tagagctcacacattttaattgtggagaagtgaggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctatcaactgagctaagct 11375953  T
Q  242 catggagatac 252  Q
    || || |||||    
T  11375954 cacggggatac 11375964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 19594295 - 19594237
Alignment:
Q  185 gttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagtgaagctca 243  Q
    |||||||| ||| ||||||| ||||||||| |||||  ||||||||||||| |||||||    
T  19594295 gttcgaaccctggcccctacatataatatgcaatatctctatcaactgagttaagctca 19594237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 21432742 - 21432680
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatcc 181  Q
    ||||| ||||||||| ||||  ||||| |||||||||||||||||| ||||| ||| ||||||    
T  21432742 tttttgtcaagtagcctagtagttagagctcacacattttaaatatggagaaatggggtatcc 21432680  T

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Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 40994051 - 40994169
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||   ||||||| |  || ||||| ||||||||| ||||| |||    
T  40994051 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccgggattcgaaccccaactcctacatataatatgcaatatccct 40994150  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  40994151 accaactgagctaagctca 40994169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 43147332 - 43147450
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  43147332 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 43147431  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  43147432 accaactgagctaagctca 43147450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 45112060 - 45112177
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| ||||| | ||| |||||||| ||||| ||| |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  45112060 tcaagtagcctagtgct-agagctcacacaatttaattatggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 45112158  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  45112159 accaactgaggtaagctca 45112177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 46774978 - 46775096
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  46774978 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 46775077  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  46775078 accaactgagctaagctca 46775096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 624614 - 624553
Alignment:
Q  113 actttctttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtgg 174  Q
    ||||| ||||| ||||||||  ||||| ||||| |||||||||||||||| | |||||||||    
T  624614 actttttttttgtcaagtagtttagtggttagagctcacacattttaaatgtggagaagtgg 624553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 626924 - 626997
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaac 192  Q
    ||||| ||||||||| ||||| ||||| |||||||| ||||| | | |||||||||||| ||||  ||||||||    
T  626924 tttttgtcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaac 626997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 4234250 - 4234351
Alignment:
Q  142 tagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagtgaagct 241  Q
    |||| |||||||| ||||| | | || ||||||||| ||||| |||||||| | | | ||| | ||||||||| ||||| |||||||||||||  |||||    
T  4234250 tagagctcacacaatttaattgtggaaaagtggagtgtccgaggttcgaaccccggctcctgcatataatatgcaatatccctatcaactgagctaagct 4234349  T
Q  242 ca 243  Q
    ||    
T  4234350 ca 4234351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 12504608 - 12504709
Alignment:
Q  142 tagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagtgaagct 241  Q
    |||| |||||||| ||||| | | |||||||||||||||||  ||||||||   ||| ||| | ||||||||| ||||| |||| ||||||||  |||||    
T  12504608 tagagctcacacaatttaattgtggagaagtggagtatccggggttcgaacctcgactcctgcatataatatgcaatatccctaccaactgagataagct 12504707  T
Q  242 ca 243  Q
    ||    
T  12504708 ca 12504709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 231
Target Start/End: Original strand, 27103066 - 27103155
Alignment:
Q  142 tagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaact 231  Q
    |||| |||||||| ||||| | | |||||||||||| |||| | ||||||| | |||| |||| ||||||||| ||||| |||| |||||    
T  27103066 tagagctcacacaatttaattgtggagaagtggagtgtccggaattcgaactccgacctctacatataatatgcaatatccctaccaact 27103155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 251
Target Start/End: Original strand, 27362794 - 27362903
Alignment:
Q  142 tagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagtgaagct 241  Q
    ||||||||||||| ||||| | | ||||||||| |  | ||  |||||||||  | ||||| | |||||||||||||||  ||| ||||||||| |||||    
T  27362794 tagaactcacacaatttaattgtggagaagtggggagttcggggttcgaacgtcggcccctgcatataatatgtaatatcgctaccaactgagttaagct 27362893  T
Q  242 catggagata 251  Q
    || |||||||    
T  27362894 cacggagata 27362903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 7e-17; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 110 - 243
Target Start/End: Original strand, 48897050 - 48897183
Alignment:
Q  110 atgactttctttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtata 209  Q
    |||| ||| ||||| ||||||||| ||||| ||||| |||||||| || || ||| |||||||||||| ||||  |||||||| ||| ||||| | ||||    
T  48897050 atgattttttttttgtcaagtagcctagtggttagagctcacacaattaaattatggagaagtggagtgtccggtgttcgaaccctggcccctgcatata 48897149  T
Q  210 atatgtaatatacctatcaactgagtgaagctca 243  Q
    ||||| ||||| |||| ||| ||||| |||||||    
T  48897150 atatgcaatattcctaccaaatgagttaagctca 48897183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 119 - 251
Target Start/End: Complemental strand, 5863100 - 5862968
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||  ||||| |||||||||||||||||||||||  ||||||||  || |||| ||||| |||  || ||| |   |||||||||||||    
T  5863100 tttttgtcaagtagtctagtggttagaactcacacattttaaatacggagaagtgaggtgtccggagttcaaaccttggcccttggatataatatgtaat 5863001  T
Q  219 atacctatcaactgagtgaagctcatggagata 251  Q
    || |||| ||||||| | ||||||| |||||||    
T  5863000 atccctaccaactgaattaagctcacggagata 5862968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 250
Target Start/End: Complemental strand, 18534129 - 18533998
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | ||| ||||| ||||||||| |||    
T  18534129 tttttttcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctacatataatatgcaat 18534030  T
Q  219 atacctatcaactgagtgaagctcatggagat 250  Q
    ||  ||| ||||||||  ||||||| ||||||    
T  18534029 atctctaccaactgagctaagctcacggagat 18533998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 234
Target Start/End: Original strand, 47930613 - 47930728
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||||||||||||| ||||| ||||| |||||||| ||||| | |  |||||||| |||||||| |||||||| |   ||||| | ||||||||| |||    
T  47930613 tttttatcaagtagcctagtggttagagctcacacaatttaattgtgaagaagtggggtatccgaggttcgaaccccagcccctgcatataatatgcaat 47930712  T
Q  219 atacctatcaactgag 234  Q
    || |||| ||||||||    
T  47930713 atccctaccaactgag 47930728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 356
Target Start/End: Complemental strand, 41502866 - 41502796
Alignment:
Q  286 tttttaatttcatttaataaatggtgtatctgatttttaatatagactagataaattatttattgaatgaa 356  Q
    ||||||| |||||| |||||||| ||||| ||||| |||||| ||||||||||  ||||||||||||||||    
T  41502866 tttttaaattcattcaataaatgatgtatgtgattcttaataaagactagatacgttatttattgaatgaa 41502796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 4482540 - 4482664
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||||||||  |||||||| | | | ||| | ||||||||| |||    
T  4482540 tttttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtatccggggttcgaactccggctcctgcatataatatgcaat 4482639  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||  |||||||    
T  4482640 atccctaccaactgagctaagctca 4482664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 294 - 385
Target Start/End: Original strand, 39940526 - 39940616
Alignment:
Q  294 ttcatttaataaatggtgtatctgatttttaatatagactagataaattatttattgaatgaacctacaaagtgaactttctcttataatag 385  Q
    ||||||||||||||| ||||| || ||| || ||||||||| ||| ||||||||||||||||| ||| ||||| || |||  ||||||||||    
T  39940526 ttcatttaataaatgatgtatatggtttata-tatagactacatacattatttattgaatgaatctaaaaagtaaatttttacttataatag 39940616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 32594373 - 32594255
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | ||| ||| | ||||||||| ||||| |||    
T  32594373 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatccct 32594274  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  32594273 accaactgagctaagctca 32594255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 46965862 - 46965744
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| ||| |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  46965862 tcaagtagcctagtggctagagctcacacaatttaattatggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 46965763  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  46965762 accaactgagctaagctca 46965744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 665 - 703
Target Start/End: Original strand, 47215623 - 47215661
Alignment:
Q  665 tgttatttgaacaaccaatttggttgataacttttgtga 703  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  47215623 tgttatttgaacaactaatttggttgataacttttgtga 47215661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 251
Target Start/End: Complemental strand, 12662807 - 12662683
Alignment:
Q  127 aagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacc-ta 225  Q
    ||||||| |||||| ||||||||||||| || |||| ||||||||| |||| |||||  ||||||| | | ||||| | ||||||||| ||||| || ||    
T  12662807 aagtagcttagtgactagaactcacacaattaaaatgtagagaagt-gagtgtccgagtttcgaactccggcccctgcatataatatgcaatatccctta 12662709  T
Q  226 tcaactgagtgaagctcatggagata 251  Q
    | |||||||  ||||||| |||||||    
T  12662708 ttaactgagctaagctcacggagata 12662683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 27178651 - 27178692
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaa 160  Q
    ||||||||||||||||||||| ||||| ||||||||||||||    
T  27178651 tttttatcaagtagcatagtggttagagctcacacattttaa 27178692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 2277882 - 2277758
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| |||    
T  2277882 tttttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtctccggggttcgaaccccggctcctgcatataatatgcaat 2277783  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||  |||||||    
T  2277782 atccctaccaactgagctaagctca 2277758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 312 - 356
Target Start/End: Original strand, 2740468 - 2740512
Alignment:
Q  312 tatctgatttttaatatagactagataaattatttattgaatgaa 356  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||||    
T  2740468 tatctaatttttaatatagactagatacattatttattaaatgaa 2740512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 234
Target Start/End: Original strand, 6129998 - 6130090
Alignment:
Q  142 tagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgag 234  Q
    |||| |||||||| ||||| | | |||||||||||| |||| ||||||||| | ||| ||| | ||||||||| ||||| |||| ||||||||    
T  6129998 tagagctcacacaatttaattgtggagaagtggagtgtccggagttcgaaccccgactcctgcatataatatgcaatatccctaccaactgag 6130090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 251
Target Start/End: Original strand, 8984448 - 8984579
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| |||    
T  8984448 tttttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccg-ggttcgaaccccggctcctgcatataatatgcaat 8984546  T
Q  219 atacctatcaactgagtgaagctcatggagata 251  Q
    || |||  ||||||||| ||||||| |||||||    
T  8984547 atccctgccaactgagttaagctcacggagata 8984579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 125 - 233
Target Start/End: Original strand, 13538394 - 13538502
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    |||||||| ||||||  ||||||||||||| || || | | |||||||||||| ||||  |||||||| | | ||||| | ||||||||| ||||| |||    
T  13538394 tcaagtagtatagtggctagaactcacacaattaaattgtggagaagtggagtgtccggggttcgaaccccggcccctgcatataatatgcaatatccct 13538493  T
Q  225 atcaactga 233  Q
    | |||||||    
T  13538494 accaactga 13538502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 366
Target Start/End: Complemental strand, 15290679 - 15290607
Alignment:
Q  294 ttcatttaataaatggtgtatctgatttttaatatagactagataaattatttattgaatgaacctacaaagt 366  Q
    ||||||||||||||| ||||| || |   |||||||||||| ||| || ||||| ||||||||||||||||||    
T  15290679 ttcatttaataaatgatgtatttggtcaataatatagactaaatacatcatttaatgaatgaacctacaaagt 15290607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 16343156 - 16343032
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| |||    
T  16343156 tttttgtcaagtagcttagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaat 16343057  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||  |||||||    
T  16343056 atccctaccaactgagctaagctca 16343032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 22563514 - 22563390
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| || || | | |||||||||||| ||||  |||||||| | | ||||| | ||||||||| |||    
T  22563514 tttttgtcaagtagcctagtggctagagctcacacaattaaattgtggagaagtggagtgtccggggttcgaaccccggcccctgcatataatatgcaat 22563415  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||  |||||||    
T  22563414 atccctaccaactgagctaagctca 22563390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 37662499 - 37662623
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||  ||||| || || |||||||| ||||| | ||||||||||| || ||||  ||||| || | ||||||| | ||||||||| |||    
T  37662499 tttttgtcaagtagtctagtggttggagctcacacaatttaactgtagagaagtggggtgtccggggttcgtaccccgacccctgcatataatatgcaat 37662598  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||  |||||||    
T  37662599 atccctaccaactgagctaagctca 37662623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 252
Target Start/End: Original strand, 6438012 - 6438139
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  6438012 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 6438111  T
Q  225 atcaactgagtgaagctcatggagatac 252  Q
    | ||||||||  ||||||| || |||||    
T  6438112 accaactgagctaagctcacggggatac 6438139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 12613305 - 12613250
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtgg 174  Q
    ||||| ||||| ||| |||||||| || |||||||||||||||| |||||||||||    
T  12613305 tttttgtcaagcagcctagtgattggagctcacacattttaaatgtagagaagtgg 12613250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 246
Target Start/End: Complemental strand, 14396567 - 14396440
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||   ||| |||||| | ||||| | ||||||| |||||| | ||  |||||||| | ||||||| | ||||| |||| ||    
T  14396567 tttttgtcaagtagcctagtggccagagctcacataatttaattgtagagaaatggagtgttcggggttcgaaccccgacccctgcatataaaatgtgat 14396468  T
Q  219 atacctatcaactgagtgaagctcatgg 246  Q
    || |||||||||||||  ||||||||||    
T  14396467 atccctatcaactgagctaagctcatgg 14396440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 369
Target Start/End: Complemental strand, 34184543 - 34184460
Alignment:
Q  286 tttttaatttcatttaataaatggtgtatctgatttttaatatagactagataaattatttattgaatgaacctacaaagtgaa 369  Q
    ||||||| |||||| |||||||  ||||| ||||   || ||||||||| ||| |||||||||||||| |||||| ||||||||    
T  34184543 tttttaagttcattcaataaattatgtatgtgatccatattatagactacatacattatttattgaataaacctaaaaagtgaa 34184460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 36726673 - 36726574
Alignment:
Q  135 tagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgag 234  Q
    ||||| ||||| |||||||| ||||| | | ||||||||||||||||||  |||||||  || | ||| | ||||||||  ||||| |||||||||||||    
T  36726673 tagtggttagagctcacacaatttaattgtggagaagtggagtatccgagattcgaaccttggctcctgcatataatatacaatattcctatcaactgag 36726574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 50746839 - 50746724
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||||||||||||  ||||| ||||| ||| |||| ||||| | | ||||||||| || ||||  |||||||  | |||| |||| |||||||||| ||    
T  50746839 tttttatcaagtagtctagtggttagagctcgcacaatttaattgtggagaagtggggtgtccggggttcgaatcccgacctctacatataatatgtgat 50746740  T
Q  219 atacctatcaactgag 234  Q
    || |||| ||||||||    
T  50746739 atccctaccaactgag 50746724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 1570140 - 1570258
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  1570140 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 1570239  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  1570240 accaactgagctaagctca 1570258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 15819549 - 15819667
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  15819549 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 15819648  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  15819649 accaactgagctaagctca 15819667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 26584694 - 26584812
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | |||||||||||||| | ||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  26584694 tcaagtagcctagtggctagagctcacacaatttaattgtagagaagtggagtgtgcggggttcgaaccccgcctcctgcatataatatgcaatatccct 26584793  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  26584794 accaactgagctaagctca 26584812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 336 - 386
Target Start/End: Original strand, 44938280 - 44938330
Alignment:
Q  336 ataaattatttattgaatgaacctacaaagtgaactttctcttataataga 386  Q
    |||||||||||| |||||||| ||||||||| || ||| ||||||||||||    
T  44938280 ataaattatttactgaatgaatctacaaagtaaattttatcttataataga 44938330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 283 - 369
Target Start/End: Original strand, 49586275 - 49586361
Alignment:
Q  283 cattttttaatttcatttaataaatggtgtatctgatttttaatatagactagataaattatttattgaatgaacctacaaagtgaa 369  Q
    |||||||||  ||||||||||||||  ||||| || ||  || ||||||| | ||| || |||||||||||||||||| ||||||||    
T  49586275 cattttttaggttcatttaataaattatgtatatggttcatattatagaccatatacatcatttattgaatgaacctaaaaagtgaa 49586361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 993527 - 993564
Alignment:
Q  151 cacattttaaatatagagaagtggagtatccgaagttc 188  Q
    ||||||||||||||||||||||||||| |||| |||||    
T  993527 cacattttaaatatagagaagtggagtgtccggagttc 993564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 11356876 - 11356839
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaat 162  Q
    ||||||||| ||||| ||||||||||||||||||||||    
T  11356876 tcaagtagcctagtggttagaactcacacattttaaat 11356839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 234
Target Start/End: Original strand, 12502202 - 12502311
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||   ||||||| | ||| ||| | ||||||||| ||||| |||    
T  12502202 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccgggtttcgaaccccgactcctgcatataatatgcaatatccct 12502301  T
Q  225 atcaactgag 234  Q
    | ||||||||    
T  12502302 accaactgag 12502311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 13763861 - 13763816
Alignment:
Q  147 ctcacacattttaaatatagagaagtggagtatccgaagttcgaac 192  Q
    |||||||||||||||| ||||||||||| |||||||  ||||||||    
T  13763861 ctcacacattttaaatgtagagaagtggggtatccggggttcgaac 13763816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 390
Target Start/End: Complemental strand, 22341023 - 22340934
Alignment:
Q  301 aataaatggtgtatctgatttttaatatagactagataaattatttattgaatgaacctacaaagtgaactttctcttataatagaaacc 390  Q
    |||||||| |||||||  ||  ||||||||||| |||| || ||||||| |||||  ||| ||||| |||||| ||||||||| ||||||    
T  22341023 aataaatgatgtatctagttcctaatatagacttgatacatcatttattcaatgagtctaaaaagttaactttatcttataattgaaacc 22340934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 22592539 - 22592592
Alignment:
Q  135 tagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttc 188  Q
    ||||| ||||||||||||||| |||||||| ||||||||| || |||| |||||    
T  22592539 tagtggttagaactcacacatattaaatatggagaagtggggtgtccggagttc 22592592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 24478774 - 24478701
Alignment:
Q  286 tttttaatttcatttaataaatggtgtatctgatttttaatatagactagataaattatttattgaatgaacct 359  Q
    ||||||| |||||||||| |||| ||||| || ||| |||||||||| | ||| || ||| |||||||||||||    
T  24478774 tttttaagttcatttaattaatgatgtatgtggtttataatatagaccacatatatcattaattgaatgaacct 24478701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 3e-16; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 38955136 - 38955260
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| ||||| | ||||||||| |||| ||||  |||||||| | | ||||| | |||||||||||||    
T  38955136 tttttgtcaagtagcctagtggatagagctcacacaatttaattgtagagaagtcgagtgtccggggttcgaaccccggcccctgcatataatatgtaat 38955235  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||| |||||||    
T  38955236 atccctaccaactgagttaagctca 38955260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 31450899 - 31451030
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| |||| ||||||||| | | | ||| | ||||||||| |||    
T  31450899 tttttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggagttcgaaccccggctcctgcatataatatgcaat 31450998  T
Q  219 atacctatcaactgagtgaagctcatggagat 250  Q
    || |||| ||||||||| ||||||| ||||||    
T  31450999 atccctaccaactgagttaagctcacggagat 31451030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 119 - 213
Target Start/End: Original strand, 42801591 - 42801685
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatat 213  Q
    ||||| ||||||||  ||||| |||||||||||||| ||||| ||| ||||||||| || ||||| |||||||| | ||||||||| ||||||||    
T  42801591 tttttgtcaagtagtctagtggttagaactcacacaatttaattatggagaagtggggtgtccgaggttcgaaccccgacccctacatataatat 42801685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 9070667 - 9070791
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| ||||| ||||| |||| ||| ||||| | | || ||||||||| ||||| |||||||| ||||||||||| ||||| |||  ||    
T  9070667 tttttgtcaagtagcctagtggttagagctcatacaatttaattgtggaaaagtggagtgtccgaggttcgaaccctgacccctacatataaaatgcgat 9070766  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || ||||  |||||||| |||||||    
T  9070767 atccctactaactgagttaagctca 9070791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 43053855 - 43053959
Alignment:
Q  147 ctcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagtgaagctcatgg 246  Q
    |||||||| ||||| | | |||||||||||| |||||| ||||||| | ||| ||| | ||||||||| ||||| |||| ||||||||| ||||||| ||    
T  43053855 ctcacacaatttaattgtggagaagtggagtgtccgaaattcgaaccccgactcctgcatataatatgaaatatccctaccaactgagttaagctcacgg 43053954  T
Q  247 agata 251  Q
    |||||    
T  43053955 agata 43053959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 8265390 - 8265272
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| || || | | |||||||||||| ||||  |||||||| ||||||||| | ||||||||| ||||| |||    
T  8265390 tcaagtagcctagtggctagagctcacacaattaaattgtggagaagtggagtgtccggggttcgaaccctgacccctgcatataatatgcaatatccct 8265291  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  8265290 accaactgagctaagctca 8265272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 251
Target Start/End: Complemental strand, 13406722 - 13406596
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    |||||||||||||||  |||| |||||||| ||||| | | |||||||||||| |||   |||||||| | | | ||| | ||||||||| ||||| |||    
T  13406722 tcaagtagcatagtggctagagctcacacaatttaattgtggagaagtggagtgtccagggttcgaactccggctcctgcatataatatgcaatatccct 13406623  T
Q  225 atcaactgagtgaagctcatggagata 251  Q
    | ||||||||| ||||||| |||||||    
T  13406622 accaactgagttaagctcacggagata 13406596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 94453 - 94577
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| ||||| ||||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| |||    
T  94453 tttttgtcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaactccggctcctgcatataatatgcaat 94552  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||  |||||||    
T  94553 atccctaccaactgagctaagctca 94577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 251
Target Start/End: Original strand, 16432070 - 16432202
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| || || ||| |||||||||||| ||||| |||||||| | | | ||| | ||||||||| |||    
T  16432070 tttttgtcaagtagcctagtggctagagctcacacaattaaattatggagaagtggagtgtccgatgttcgaaccccggctcctgcatataatatgcaat 16432169  T
Q  219 atacctatcaactgagtgaagctcatggagata 251  Q
    || |||| ||||||||  ||| ||| |||||||    
T  16432170 atccctaccaactgagctaagttcacggagata 16432202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 235
Target Start/End: Original strand, 29733947 - 29734063
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| ||||| | |||||||||||||||||||  |||||||| | ||| ||| | ||||||||  |||    
T  29733947 tttttgtcaagtagcctagtggctagagctcacacaatttaattgtagagaagtggagtatccggggttcgaaccccgactcctgcatataatatacaat 29734046  T
Q  219 atacctatcaactgagt 235  Q
    || | || |||||||||    
T  29734047 atccttaccaactgagt 29734063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 250
Target Start/End: Complemental strand, 36918597 - 36918489
Alignment:
Q  142 tagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagtgaagct 241  Q
    |||| |||||||| ||||| ||| ||||| |||||| |||||  ||||||| |  ||| |||| ||||||||||||||| | || ||||||||| |||||    
T  36918597 tagagctcacacaatttaattatggagaaatggagtgtccgagattcgaacccctacctctacatataatatgtaatatccttaccaactgagttaagct 36918498  T
Q  242 catggagat 250  Q
    || ||||||    
T  36918497 cacggagat 36918489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 258
Target Start/End: Complemental strand, 42881053 - 42880937
Alignment:
Q  142 tagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagtgaagct 241  Q
    |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||||| ||||||||| ||||| |||| ||||||||| |||||    
T  42881053 tagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctacatataatatgcaatatccctaccaactgagttaagct 42880954  T
Q  242 catggagataccccttt 258  Q
    || || ||| |||||||    
T  42880953 cacggggatgccccttt 42880937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 34266140 - 34266025
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||| |||||||| |  || ||| | ||||||||| |||    
T  34266140 tttttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccgaggttcgaaccccaactcctgcatataatatgcaat 34266041  T
Q  219 atacctatcaactgag 234  Q
    || |||| ||||||||    
T  34266040 atccctaccaactgag 34266025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 34894497 - 34894382
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||||||||||||| |||||  |||| |||||||| ||||| | | ||||||||| || ||||  |||||||| | | ||||| | ||||||||| |||    
T  34894497 tttttatcaagtagcctagtggctagagctcacacaatttaactgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaat 34894398  T
Q  219 atacctatcaactgag 234  Q
    || |||| ||||||||    
T  34894397 atccctaccaactgag 34894382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 1632388 - 1632506
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||| | ||||| ||||| |||||||| ||||| | | ||||||| |||| ||||  |||||||| | ||| ||| | ||||||||||||||| |||    
T  1632388 tcaagtaacctagtggttagagctcacacaatttaattgtggagaagtagagtgtccggggttcgaaccccgactcctgcatataatatgtaatattcct 1632487  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  1632488 accaactgagctaagctca 1632506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 8034360 - 8034478
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  ||||||||||||| ||||| | | ||||||||| || || |  |||||||| | | ||||| | ||||||||| ||||| |||    
T  8034360 tcaagtagcctagtggctagaactcacacaatttaattgtggagaagtggggtgtctggtgttcgaaccccggcccctgcatataatatgcaatatccct 8034459  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||| |||||||    
T  8034460 accaactgagttaagctca 8034478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 665 - 703
Target Start/End: Complemental strand, 9208242 - 9208204
Alignment:
Q  665 tgttatttgaacaaccaatttggttgataacttttgtga 703  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  9208242 tgttatttgaacaaccaatttggttgacaacttttgtga 9208204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 34413184 - 34413066
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| ||||| ||||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  34413184 tcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 34413085  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  34413084 accaactgagctaagctca 34413066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 37717485 - 37717367
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  37717485 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 37717386  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||| |||||||    
T  37717385 accaactgagttaagctca 37717367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 250
Target Start/End: Original strand, 2787029 - 2787154
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  2787029 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 2787128  T
Q  225 atcaactgagtgaagctcatggagat 250  Q
    | ||||||||  ||||||| ||||||    
T  2787129 accaactgagctaagctcacggagat 2787154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 220
Target Start/End: Original strand, 31152961 - 31153062
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||||||||||||| || ||  |||| |||||||| ||||| | | ||||||||| || |||   |||||||| ||||||||||| ||||||||| |||    
T  31152961 tttttatcaagtagcctaatggctagagctcacacaatttaattgtggagaagtggggtgtccagggttcgaaccctgacccctacatataatatgcaat 31153060  T
Q  219 at 220  Q
    ||    
T  31153061 at 31153062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 234
Target Start/End: Original strand, 38219516 - 38219625
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | ||| ||| | ||||||||| ||||| |||    
T  38219516 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatccct 38219615  T
Q  225 atcaactgag 234  Q
    | ||||||||    
T  38219616 accaactgag 38219625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 228
Target Start/End: Original strand, 42511525 - 42511634
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| || ||| ||||||||||||||| ||||| | ||||| ||| || | ||  |||| ||| | ||||||| | |||||||||||||    
T  42511525 tttttgtcaagtagcgtaatgactagaactcacacattataaatgtggagaaatggggtgttcggggttcaaaccccgacccctgcatataatatgtaat 42511624  T
Q  219 atacctatca 228  Q
    || |||||||    
T  42511625 attcctatca 42511634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 243
Target Start/End: Complemental strand, 133527 - 133419
Alignment:
Q  135 tagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgag 234  Q
    ||||| ||||||||| |||| ||||| | | || ||||||||| | || ||||||||| | ||| ||| | ||||||||| ||||| |||||||||||||    
T  133527 tagtggttagaactcccacaatttaactgtggaaaagtggagtgttcggagttcgaaccccgactcctgcatataatatgcaatatccctatcaactgag 133428  T
Q  235 tgaagctca 243  Q
      |||||||    
T  133427 ctaagctca 133419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 2792907 - 2792783
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||  ||||| || || |||||||| || || | | |||||||||||| ||||  |||||||| | | ||||| | ||||||||| |||    
T  2792907 tttttttcaagtagtctagtggttggagctcacacaattaaattgtggagaagtggagtgtccggggttcgaaccccggcccctgcatataatatgcaat 2792808  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||||||||||||  |||||||    
T  2792807 atccctatcaactgagctaagctca 2792783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 7679050 - 7678994
Alignment:
Q  136 agtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaac 192  Q
    |||||||| |||||| ||||||||||| | ||||| |||||| ||||||||||||||    
T  7679050 agtgattaaaactcatacattttaaatgtggagaaatggagtgtccgaagttcgaac 7678994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 235
Target Start/End: Complemental strand, 32630373 - 32630257
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    |||||||||||||   ||||| || ||||||||||||| ||||||| ||||||||||   | ||||| |||||| | ||||||||| |||| |||  |||    
T  32630373 tttttatcaagtaatctagtggttggaactcacacattataaatatggagaagtggaaagttcgaagctcgaactccgacccctacatatattatacaat 32630274  T
Q  219 atacctatcaactgagt 235  Q
    |  |||| |||||||||    
T  32630273 actcctaccaactgagt 32630257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 356
Target Start/End: Complemental strand, 37509046 - 37508975
Alignment:
Q  284 attttttaatttcatttaataaatggtgtatctgatttttaatatagactagataaattatttattgaatgaa 356  Q
    ||||||||| ||||||||||||||| ||||| |||| | | ||||| |||| ||| |||||||||||||||||    
T  37509046 attttttaacttcatttaataaatgatgtatgtgatatat-atatatactacatatattatttattgaatgaa 37508975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 252
Target Start/End: Complemental strand, 1937432 - 1937305
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | |||||||||||||| | ||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  1937432 tcaagtagcctagtggctagagctcacacaatttaattgtagagaagtggagtgtgcggggttcgaaccccgcctcctgcatataatatgcaatatccct 1937333  T
Q  225 atcaactgagtgaagctcatggagatac 252  Q
    | ||||||||  ||||||| || |||||    
T  1937332 accaactgagctaagctcacggggatac 1937305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 7816531 - 7816416
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||| |||||||| | | | ||| | ||||||||  |||    
T  7816531 tttttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccgaggttcgaaccccggctcctgcatataatattcaat 7816432  T
Q  219 atacctatcaactgag 234  Q
    || |||| ||||||||    
T  7816431 atccctaccaactgag 7816416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 10736822 - 10736940
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  10736822 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 10736921  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  10736922 accaactgagctaagctca 10736940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 11787273 - 11787155
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| ||||| ||||| |||||| | ||||| | | |||||||||||| ||||  ||| ||||   | ||||||  ||||||||||||||| | |    
T  11787273 tcaagtagcctagtggttagagctcacataatttaattgtggagaagtggagtgtccggggtttgaaccacggcccctatatataatatgtaatatccat 11787174  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||| |||||||    
T  11787173 accaactgagttaagctca 11787155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 11876008 - 11875890
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| ||||| ||||| |||||||| ||||| | | |||||||||||| ||||  |||||||| |   | ||| | ||||||||| ||||| |||    
T  11876008 tcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccagctcctgcatataatatgcaatatccct 11875909  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  11875908 accaactgagctaagctca 11875890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 11891015 - 11890897
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| ||||| ||||| |||||||| ||||| | | |||||||||||| ||||  |||||||| |   | ||| | ||||||||| ||||| |||    
T  11891015 tcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccagctcctgcatataatatgcaatatccct 11890916  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  11890915 accaactgagctaagctca 11890897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 29716982 - 29716864
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| | ||| ||||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  29716982 tcaagtagcctcgtggttagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 29716883  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  29716882 accaactgagctaagctca 29716864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 665 - 703
Target Start/End: Complemental strand, 38234188 - 38234150
Alignment:
Q  665 tgttatttgaacaaccaatttggttgataacttttgtga 703  Q
    ||||||||||||||||||||||||||| ||||| |||||    
T  38234188 tgttatttgaacaaccaatttggttgacaacttgtgtga 38234150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 234
Target Start/End: Original strand, 5328515 - 5328624
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||||||||| | | ||||||||  || ||||  |||||||| | | ||||| | ||||||||| ||||| |||    
T  5328515 tcaagtagcctagtggctagagctcacacattttaattgtggagaagtgaggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccct 5328614  T
Q  225 atcaactgag 234  Q
    | ||||||||    
T  5328615 accaactgag 5328624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 9735825 - 9735788
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaat 162  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  9735825 tcaagtagcatagtgactagagctcacacattttaaat 9735788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 284 - 393
Target Start/End: Original strand, 9812455 - 9812564
Alignment:
Q  284 attttttaatttcatttaataaatggtgtatctgatttttaatatagactagataaattatttattgaatgaacctacaaagtgaactttctcttataat 383  Q
    ||||||||| |||||| |||||||  | ||||| ||||||||||| ||||| ||| || ||||||| ||| ||  || ||||  || |||||||||||||    
T  9812455 attttttaagttcattcaataaataatatatctaatttttaatattgactatatacatcatttattcaataaatttaaaaagaaaagtttctcttataat 9812554  T
Q  384 agaaaccaaa 393  Q
    | | ||||||    
T  9812555 aaagaccaaa 9812564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 663 - 696
Target Start/End: Complemental strand, 12783933 - 12783900
Alignment:
Q  663 aatgttatttgaacaaccaatttggttgataact 696  Q
    ||||||||||||||||||||||||||||| ||||    
T  12783933 aatgttatttgaacaaccaatttggttgacaact 12783900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 13105219 - 13105146
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaac 192  Q
    ||||| |||||||||||| ||| | || |||||||||||||||| | ||||||||| || || || ||||||||    
T  13105219 tttttgtcaagtagcataatgactggagctcacacattttaaatgtggagaagtggggtgtctgaggttcgaac 13105146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 243
Target Start/End: Original strand, 23435222 - 23435299
Alignment:
Q  166 gagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagtgaagctca 243  Q
    |||||||||||||||||  |||||||| | | | ||| | ||||||||| ||||| |||||||||||||  |||||||    
T  23435222 gagaagtggagtatccggggttcgaaccccggctcctgcatataatatgcaatatccctatcaactgagctaagctca 23435299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 38774199 - 38774126
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaac 192  Q
    ||||| ||||||||| |||||  |||| |||||||  ||||| | | |||||||||||| ||||||||||||||    
T  38774199 tttttgtcaagtagcctagtggctagagctcacacgatttaattgtggagaagtggagtgtccgaagttcgaac 38774126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 243
Target Start/End: Complemental strand, 40362129 - 40362052
Alignment:
Q  166 gagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagtgaagctca 243  Q
    |||||||||||| ||||| |||||||| | ||||||| | ||||||||| ||||| ||||  |||||||  |||||||    
T  40362129 gagaagtggagtgtccgaggttcgaaccccgacccctgcatataatatgcaatatccctactaactgagctaagctca 40362052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 234
Target Start/End: Complemental strand, 43186975 - 43186866
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||  ||| | ||| | ||||||||| ||||| |||    
T  43186975 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaatcctggctcctgcatataatatgcaatatccct 43186876  T
Q  225 atcaactgag 234  Q
    | ||||||||    
T  43186875 accaactgag 43186866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 250
Target Start/End: Original strand, 44088936 - 44089028
Alignment:
Q  157 ttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagtgaagctcatggagat 250  Q
    |||||||| ||||||||| || |||||||||||||| || | |||||| ||||| ||| |||||  ||| ||||||||  || |||||||||||    
T  44088936 ttaaatatggagaagtggggtgtccgaagttcgaaccctta-ccctacatataacatgcaatatctctaccaactgagctaaactcatggagat 44089028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 49965 - 50067
Alignment:
Q  141 ttagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagtgaagc 240  Q
    ||||| |||||||| || || | | ||||||| |||| |||| ||||||||| || |||||||| ||||||||| ||||| |||||||||||||| ||||    
T  49965 ttagagctcacacaattaaattgtggagaagtagagtgtccggagttcgaaccctaacccctacatataatatgcaatatccctatcaactgagttaagc 50064  T
Q  241 tca 243  Q
    |||    
T  50065 tca 50067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 3794 - 3670
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| |||   ||| | ||||||||| |||    
T  3794 tttttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccctggttcctgcatataatatgcaat 3695  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||| |||||||    
T  3694 atccctaccaactgagttaagctca 3670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 65729 - 65853
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| ||||||||||| |||||||| || || | |  ||||||||||| ||||   ||||||| |  |||||||| ||||||||| |||    
T  65729 tttttgtcaagtagcctagtgattagagctcacacaattaaattgtgaagaagtggagtgtccgggattcgaaccccaacccctacatataatatgcaat 65828  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||  |||||||    
T  65829 atccctaccaactgagctaagctca 65853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000002; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 361283 - 361167
Alignment:
Q  127 aagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctat 226  Q
    |||||||||||||  |||| |||||| ||||||||||| ||||||||| || || | |||||||||   | | ||| | ||||||||| ||||| ||||     
T  361283 aagtagcatagtggctagagctcacatattttaaatatggagaagtggggtgtctggagttcgaacctcggctcctgcatataatatgcaatatccctac 361184  T
Q  227 caactgagtgaagctca 243  Q
    ||||||||| |||||||    
T  361183 caactgagttaagctca 361167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 27219012 - 27218897
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||  | | | ||||| ||||||||| |||    
T  27219012 tttttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaatcccggctcctacatataatatgcaat 27218913  T
Q  219 atacctatcaactgag 234  Q
    || |||||||||||||    
T  27218912 atccctatcaactgag 27218897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 246
Target Start/End: Original strand, 32611496 - 32611623
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| |||    
T  32611496 tttttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaat 32611595  T
Q  219 atacctatcaactgagtgaagctcatgg 246  Q
    || |||| ||||||||  ||||||||||    
T  32611596 atccctaccaactgagctaagctcatgg 32611623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 12284243 - 12284125
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||  |||||  |||| |||||||| ||||| | | |||||||||||| |||| ||||||||| | ||| ||| | ||||||||  ||||| |||    
T  12284243 tcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggagtttccggagttcgaaccccgacacctgcatataatattcaatatccct 12284144  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||| |||||||    
T  12284143 accaactgagttaagctca 12284125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 235
Target Start/End: Complemental strand, 28222984 - 28222875
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| ||||| ||||| |||||||| ||||| ||| |||||||||||| ||||  |||||||| | | || || | ||||||||| ||||| |||    
T  28222984 tcaagtagcctagtggttagagctcacacaatttaattatggagaagtggagtgtccg-ggttcgaaccccggcctctgcatataatatgcaatatccct 28222886  T
Q  225 atcaactgagt 235  Q
    | |||||||||    
T  28222885 accaactgagt 28222875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 234
Target Start/End: Complemental strand, 6210176 - 6210067
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||||||||| |||||||||||||| || || | | |||||||||||| || |  |||||||| |   ||||| | ||||||||| ||||| |||    
T  6210176 tcaagtagcatagtggttagaactcacacaattaaattgtggagaagtggagtgtctggggttcgaaccccagcccctgcatataatatgcaatatccct 6210077  T
Q  225 atcaactgag 234  Q
    | ||||||||    
T  6210076 accaactgag 6210067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 663 - 703
Target Start/End: Original strand, 2688956 - 2688996
Alignment:
Q  663 aatgttatttgaacaaccaatttggttgataacttttgtga 703  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  2688956 aatgttatttgaacaatcaatttggttgacaacttttgtga 2688996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 10517327 - 10517203
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | ||||||| | ||||| ||| |||    
T  10517327 tttttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgacccctgcatataaaatgcaat 10517228  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || | || ||||||||  |||||||    
T  10517227 atccataccaactgagctaagctca 10517203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 10934719 - 10934603
Alignment:
Q  127 aagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctat 226  Q
    ||||||| |||||  ||||||||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| ||||     
T  10934719 aagtagcctagtggctagaactcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccctac 10934620  T
Q  227 caactgagtgaagctca 243  Q
    ||||||||  |||||||    
T  10934619 caactgagctaagctca 10934603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 17441781 - 17441905
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    |||| |||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| |||    
T  17441781 ttttgatcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaat 17441880  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||  |||||||    
T  17441881 atccctaccaactgagctaagctca 17441905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 125 - 233
Target Start/End: Original strand, 19892224 - 19892332
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| ||| |||| || || | | |||||||||||| ||||  |||||||| | ||||||||| ||||||||| ||||| |||    
T  19892224 tcaagtagcctagtggctagagctctcacaattaaattgtggagaagtggagtgtccggggttcgaaccccgacccctacatataatatgcaatatccct 19892323  T
Q  225 atcaactga 233  Q
    | |||||||    
T  19892324 accaactga 19892332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 172
Target Start/End: Complemental strand, 7674930 - 7674883
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagt 172  Q
    ||||||| |||||||||| ||||||||| ||||||||||| |||||||    
T  7674930 tcaagtaacatagtgattggaactcacatattttaaatatggagaagt 7674883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 243
Target Start/End: Original strand, 9372148 - 9372267
Alignment:
Q  124 atcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacc 223  Q
    |||||||||| ||||   ||||||||||||| || || | | |||||||||||| |||   |||||||| | ||||||| | ||||||||| ||||| ||    
T  9372148 atcaagtagcctagtagctagaactcacacaattaaattgtggagaagtggagtgtccagggttcgaaccccgacccctgcatataatatgcaatatccc 9372247  T
Q  224 tatcaactgagtgaagctca 243  Q
    || ||||||||  |||||||    
T  9372248 taccaactgagctaagctca 9372267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 202
Target Start/End: Complemental strand, 10913537 - 10913454
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccct 202  Q
    ||||||||||||||  || ||| |||| |||||||| ||||| | ||||||||| |||||||||  |||||||| | |||||||    
T  10913537 tttttatcaagtagtctaatgactagagctcacacaatttaattgtagagaagtagagtatccggggttcgaaccccgacccct 10913454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 21248659 - 21248545
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| |||||||||| |||| ||||| ||||  || ||||| ||| |||||||||||| | |   |||||||||||||||||| | ||||| ||| |||    
T  21248659 tttttttcaagtagcaaagtggttagagctcatgcaatttaattatggagaagtggagtgttcagggttcgaacgctgacccct-catataaaatgcaat 21248561  T
Q  219 atacctatcaactgag 234  Q
    || |||| ||||||||    
T  21248560 atccctaccaactgag 21248545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 1435899 - 1435813
Alignment:
Q  157 ttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagtgaagctca 243  Q
    |||||| | |||||||||| | ||||  |||||||| ||| ||||| | ||||||||||||||| |||| | ||||||| |||||||    
T  1435899 ttaaatgtggagaagtggaatgtccggggttcgaaccctggcccctgcatataatatgtaatatccctacctactgagttaagctca 1435813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 294 - 360
Target Start/End: Original strand, 6033005 - 6033071
Alignment:
Q  294 ttcatttaataaatggtgtatctgatttttaatatagactagataaattatttattgaatgaaccta 360  Q
    ||||||||||||||  ||||| || | |||||||||||||| ||| || |||||||| |||||||||    
T  6033005 ttcatttaataaataatgtatgtggtctttaatatagactacatacatcatttattggatgaaccta 6033071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 19953776 - 19953894
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  19953776 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 19953875  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  19953876 accaactgagctaagctca 19953894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 233
Target Start/End: Complemental strand, 31105009 - 31104896
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| || ||||||||| ||  |||| |||||||||||||| | | ||||||||| || ||||   ||||||| | | ||||| | |||||||||||||    
T  31105009 tttttgtctagtagcataatggctagagctcacacattttaa-tgtggagaagtggggtgtccgggattcgaactccggcccctgcatataatatgtaat 31104911  T
Q  219 atacctatcaactga 233  Q
    || ||||||||||||    
T  31104910 atccctatcaactga 31104896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 31802175 - 31802057
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||  |||||  |||| |||||||| ||||| | | |||||||||||| ||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  31802175 tcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccct 31802076  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||| |||||||    
T  31802075 accaactgagttaagctca 31802057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 177
Target Start/End: Complemental strand, 1765093 - 1765064
Alignment:
Q  148 tcacacattttaaatatagagaagtggagt 177  Q
    ||||||||||||||||||||||||||||||    
T  1765093 tcacacattttaaatatagagaagtggagt 1765064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 231
Target Start/End: Original strand, 2500479 - 2500568
Alignment:
Q  142 tagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaact 231  Q
    |||| |||||||| ||||| | | |||||||||||| |||| | ||||||| | |||| |||| ||||||||| ||||| |||| |||||    
T  2500479 tagagctcacacaatttaattgtggagaagtggagtgtccggaattcgaactccgacctctacatataatatgcaatatccctaccaact 2500568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 3294869 - 3294768
Alignment:
Q  142 tagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagtgaagct 241  Q
    ||||||||||||| ||||| | |  |||||||| || ||||  |||||||| | ||||||| | ||||||||| ||||| |||| ||||||||  |||||    
T  3294869 tagaactcacacaatttaattgtgaagaagtggggtgtccggggttcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaagct 3294770  T
Q  242 ca 243  Q
    ||    
T  3294769 ca 3294768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 220
Target Start/End: Original strand, 10913021 - 10913122
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| || || ||| |||||||||||| || |  |||||||| | ||||||| | ||||||||| |||    
T  10913021 tttttttcaagtagcttagtggctagagctcacacaattaaattatggagaagtggagtgtctggggttcgaaccccgacccctgcatataatatgcaat 10913120  T
Q  219 at 220  Q
    ||    
T  10913121 at 10913122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 32837447 - 32837346
Alignment:
Q  142 tagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagtgaagct 241  Q
    |||| |||||||| ||||| ||| |||||| ||||   ||| ||||||||| |  |||| ||| ||||||||||||||| |||| ||||||||  |||||    
T  32837447 tagagctcacacaatttaattatggagaagaggagaggccggagttcgaaccccaacccttacatataatatgtaatatccctagcaactgagctaagct 32837348  T
Q  242 ca 243  Q
    ||    
T  32837347 ca 32837346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1787 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold1787
Description:

Target: scaffold1787; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 512 - 413
Alignment:
Q  135 tagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgag 234  Q
    ||||| |||||  ||||||| ||||| | |||||||||||||| ||||| |||||||| | | ||||| | ||||||||| ||||| |||||||| ||||    
T  512 tagtggttagagttcacacaatttaattgtagagaagtggagtgtccgaggttcgaaccccggcccctgcatataatatgcaatatccctatcaattgag 413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 5625 - 5680
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtgg 174  Q
    ||||| ||||||||| ||||| ||||| ||||||||||||||||| ||||||||||    
T  5625 tttttgtcaagtagcctagtggttagagctcacacattttaaatacagagaagtgg 5680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 9088 - 8970
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||||||||  |||||||| | | | ||| | ||||||||| ||||| |||    
T  9088 tcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtatccggggttcgaactccggctcctgcatataatatgcaatatccct 8989  T
Q  225 atcaactgagtgaagctca 243  Q
    | ||||||||  |||||||    
T  8988 accaactgagctaagctca 8970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 235
Target Start/End: Complemental strand, 23482 - 23373
Alignment:
Q  125 tcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacct 224  Q
    ||||||||| ||||| ||||| |||||||| ||||| ||| |||||||||||| ||||  |||||||| | | || || | ||||||||| ||||| |||    
T  23482 tcaagtagcctagtggttagagctcacacaatttaattatggagaagtggagtgtccg-ggttcgaaccccggcctctgcatataatatgcaatatccct 23384  T
Q  225 atcaactgagt 235  Q
    | |||||||||    
T  23383 accaactgagt 23373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 1390 - 1266
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||||||||   |||||||  | || ||| | ||||||||  |||    
T  1390 tttttgtcaagtagcttagtggctagagctcacacaatttaattgtggagaagtggagtatccgggattcgaaccttaactcctgcatataatatacaat 1291  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||| |||||||    
T  1290 attcctaccaactgagttaagctca 1266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 235
Target Start/End: Original strand, 17203 - 17319
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||||||||||||| |||||  |||| |||||||| ||||| | |  ||||||||||| ||||  |||||||| | | ||||| | | ||| ||| |||    
T  17203 tttttatcaagtagcctagtggctagagctcacacaatttaattgtgaagaagtggagtgtccggggttcgaaccccggcccctgcatgtaaaatgcaat 17302  T
Q  219 atacctatcaactgagt 235  Q
    || ||||||||||||||    
T  17303 atccctatcaactgagt 17319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 1445 - 1321
Alignment:
Q  119 tttttatcaagtagcatagtgattagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaat 218  Q
    ||||| ||||||||| |||||  |||| |||||||| ||||| | | |||||||||||||||||   |||||||  | || ||| | ||||||||  |||    
T  1445 tttttgtcaagtagcttagtggctagagctcacacaatttaattgtggagaagtggagtatccgggattcgaaccttaactcctgcatataatatacaat 1346  T
Q  219 atacctatcaactgagtgaagctca 243  Q
    || |||| ||||||||| |||||||    
T  1345 attcctaccaactgagttaagctca 1321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 15869 - 15768
Alignment:
Q  142 tagaactcacacattttaaatatagagaagtggagtatccgaagttcgaacgctgacccctacgtataatatgtaatatacctatcaactgagtgaagct 241  Q
    |||| |||||||| ||||| | | |||||||||||||||||  ||||||||   ||| ||| | ||||||||| ||||| |||| ||||||||  |||||    
T  15869 tagagctcacacaatttaattgtggagaagtggagtatccggggttcgaacctcgactcctgcatataatatgcaatatccctaccaactgagataagct 15770  T
Q  242 ca 243  Q
    ||    
T  15769 ca 15768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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