View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1122_low_11 (Length: 251)

Name: NF1122_low_11
Description: NF1122
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1122_low_11
NF1122_low_11
[»] chr1 (30 HSPs)
chr1 (1-116)||(50209757-50209872)
chr1 (1-108)||(22354123-22354230)
chr1 (1-118)||(22355726-22355843)
chr1 (1-118)||(27250281-27250398)
chr1 (1-116)||(21301081-21301196)
chr1 (1-107)||(433470-433576)
chr1 (1-108)||(34510243-34510350)
chr1 (1-118)||(21027132-21027249)
chr1 (2-116)||(20135651-20135766)
chr1 (5-108)||(22532736-22532839)
chr1 (1-118)||(20846771-20846888)
chr1 (1-112)||(20919064-20919175)
chr1 (1-86)||(22357444-22357529)
chr1 (1-106)||(38800955-38801060)
chr1 (2-107)||(20091026-20091131)
chr1 (35-116)||(20228364-20228445)
chr1 (1-112)||(22468243-22468355)
chr1 (1-106)||(33681472-33681578)
chr1 (1-108)||(22921418-22921525)
chr1 (1-108)||(43697823-43697930)
chr1 (4-54)||(21162194-21162244)
chr1 (72-106)||(21754577-21754611)
chr1 (35-116)||(33798003-33798084)
chr1 (35-105)||(20248774-20248845)
chr1 (69-108)||(35260629-35260668)
chr1 (12-106)||(45307764-45307859)
chr1 (34-108)||(20637347-20637421)
chr1 (1-106)||(42864764-42864870)
chr1 (66-107)||(26065520-26065561)
chr1 (38-86)||(35981260-35981308)
[»] chr8 (37 HSPs)
chr8 (1-116)||(18817953-18818068)
chr8 (1-116)||(18878780-18878895)
chr8 (1-116)||(19800970-19801085)
chr8 (1-116)||(20536671-20536786)
chr8 (1-116)||(23406844-23406959)
chr8 (1-108)||(21923479-21923586)
chr8 (1-112)||(16091888-16091999)
chr8 (1-108)||(28648595-28648702)
chr8 (1-106)||(5865830-5865935)
chr8 (1-106)||(31971707-31971812)
chr8 (1-106)||(41598647-41598752)
chr8 (2-108)||(22875529-22875635)
chr8 (1-102)||(17141376-17141477)
chr8 (1-106)||(21249844-21249949)
chr8 (5-106)||(45130584-45130685)
chr8 (1-108)||(6759720-6759827)
chr8 (1-108)||(22627198-22627305)
chr8 (1-106)||(21255682-21255787)
chr8 (1-106)||(21918563-21918668)
chr8 (1-97)||(16199220-16199316)
chr8 (1-116)||(7373212-7373328)
chr8 (1-116)||(23649016-23649131)
chr8 (1-106)||(21389005-21389111)
chr8 (35-108)||(21860063-21860136)
chr8 (1-95)||(21491455-21491549)
chr8 (35-108)||(21286718-21286791)
chr8 (7-106)||(21395529-21395629)
chr8 (7-106)||(21790022-21790122)
chr8 (1-106)||(26355250-26355356)
chr8 (35-106)||(23760392-23760464)
chr8 (1-112)||(6520831-6520942)
chr8 (1-106)||(21674168-21674274)
chr8 (65-106)||(22526099-22526140)
chr8 (33-106)||(37115978-37116051)
chr8 (65-106)||(17438982-17439023)
chr8 (65-106)||(22365266-22365307)
chr8 (38-86)||(5610211-5610259)
[»] chr7 (35 HSPs)
chr7 (1-116)||(12699295-12699410)
chr7 (1-116)||(9509652-9509767)
chr7 (1-108)||(38227943-38228050)
chr7 (1-116)||(39267189-39267304)
chr7 (1-116)||(9751093-9751208)
chr7 (1-108)||(3563915-3564022)
chr7 (1-115)||(26212448-26212562)
chr7 (1-106)||(27847397-27847502)
chr7 (1-116)||(18302641-18302756)
chr7 (1-118)||(11995599-11995716)
chr7 (1-106)||(34201246-34201351)
chr7 (154-240)||(10866051-10866135)
chr7 (1-118)||(15754428-15754545)
chr7 (1-118)||(40443840-40443957)
chr7 (7-105)||(15143590-15143688)
chr7 (1-105)||(16385812-16385916)
chr7 (1-106)||(810681-810787)
chr7 (1-106)||(19649037-19649143)
chr7 (1-63)||(28504897-28504959)
chr7 (1-107)||(12756268-12756375)
chr7 (1-60)||(2831905-2831964)
chr7 (12-103)||(21064717-21064809)
chr7 (1-106)||(24054929-24055035)
chr7 (35-108)||(16219267-16219340)
chr7 (35-106)||(44117001-44117073)
chr7 (1-108)||(47832271-47832378)
chr7 (1-106)||(68209-68315)
chr7 (1-106)||(11880713-11880819)
chr7 (67-106)||(9703772-9703811)
chr7 (1-106)||(18006104-18006210)
chr7 (1-106)||(44014637-44014743)
chr7 (67-108)||(9389267-9389308)
chr7 (12-106)||(4993960-4994055)
chr7 (1-106)||(3272248-3272354)
chr7 (67-108)||(17061532-17061573)
[»] chr6 (40 HSPs)
chr6 (1-116)||(22779770-22779885)
chr6 (1-116)||(17287339-17287454)
chr6 (1-116)||(27415497-27415612)
chr6 (1-118)||(20637835-20637952)
chr6 (1-108)||(28496024-28496131)
chr6 (1-108)||(29808434-29808541)
chr6 (1-116)||(21939846-21939961)
chr6 (1-118)||(1561766-1561883)
chr6 (1-106)||(16920197-16920302)
chr6 (1-108)||(18409378-18409485)
chr6 (1-108)||(19303092-19303199)
chr6 (1-106)||(22439262-22439368)
chr6 (1-116)||(1645141-1645256)
chr6 (1-108)||(18457177-18457285)
chr6 (1-111)||(25602932-25603043)
chr6 (1-108)||(25628906-25629013)
chr6 (1-106)||(19863440-19863546)
chr6 (1-106)||(22831954-22832060)
chr6 (1-108)||(15893981-15894088)
chr6 (1-62)||(22334479-22334540)
chr6 (35-108)||(22080287-22080361)
chr6 (1-108)||(25956172-25956279)
chr6 (4-106)||(31154950-31155053)
chr6 (1-106)||(22432712-22432818)
chr6 (1-54)||(20594236-20594289)
chr6 (35-108)||(23019904-23019977)
chr6 (1-105)||(25641737-25641842)
chr6 (4-106)||(4185375-4185478)
chr6 (1-106)||(18180949-18181055)
chr6 (1-106)||(31164410-31164516)
chr6 (4-102)||(4667769-4667868)
chr6 (4-102)||(4674616-4674715)
chr6 (1-106)||(19652658-19652764)
chr6 (75-108)||(15539816-15539849)
chr6 (65-106)||(18230771-18230812)
chr6 (65-106)||(18231153-18231194)
chr6 (65-106)||(20224546-20224587)
chr6 (65-106)||(22118530-22118571)
chr6 (72-108)||(20594286-20594322)
chr6 (1-33)||(25611349-25611381)
[»] chr4 (39 HSPs)
chr4 (1-116)||(22636897-22637012)
chr4 (1-116)||(44053292-44053407)
chr4 (1-118)||(12903208-12903325)
chr4 (1-118)||(16239533-16239650)
chr4 (2-108)||(20156841-20156947)
chr4 (1-118)||(7089329-7089446)
chr4 (2-106)||(3097096-3097200)
chr4 (1-116)||(24029204-24029319)
chr4 (4-116)||(3332284-3332396)
chr4 (1-108)||(15091360-15091467)
chr4 (1-106)||(15552276-15552382)
chr4 (1-116)||(22633756-22633871)
chr4 (1-106)||(17053494-17053599)
chr4 (1-108)||(16377073-16377180)
chr4 (1-108)||(44928474-44928581)
chr4 (1-104)||(14052869-14052971)
chr4 (1-108)||(44102672-44102780)
chr4 (1-108)||(12774461-12774569)
chr4 (1-86)||(14039112-14039197)
chr4 (5-118)||(16597112-16597225)
chr4 (1-108)||(21815182-21815290)
chr4 (1-108)||(6190896-6191004)
chr4 (1-108)||(21818275-21818383)
chr4 (1-60)||(13812408-13812467)
chr4 (1-108)||(39705839-39705946)
chr4 (1-62)||(7799160-7799222)
chr4 (35-108)||(43198139-43198212)
chr4 (72-116)||(7799210-7799254)
chr4 (75-118)||(23374074-23374117)
chr4 (1-106)||(13569972-13570078)
chr4 (1-106)||(23843939-23844045)
chr4 (1-106)||(44676092-44676198)
chr4 (13-106)||(46639925-46640018)
chr4 (67-106)||(10314244-10314283)
chr4 (1-108)||(13845002-13845109)
chr4 (1-106)||(15121356-15121462)
chr4 (73-106)||(8846889-8846922)
chr4 (65-106)||(53081652-53081693)
chr4 (66-106)||(12287686-12287726)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-118)||(13663-13780)
[»] scaffold0305 (1 HSPs)
scaffold0305 (1-116)||(20866-20981)
[»] scaffold0080 (1 HSPs)
scaffold0080 (1-108)||(40374-40481)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-116)||(2314-2429)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-112)||(339498-339609)
scaffold0003 (1-116)||(71749-71864)
[»] chr5 (36 HSPs)
chr5 (1-116)||(23390039-23390154)
chr5 (1-116)||(25421995-25422110)
chr5 (1-108)||(1096930-1097037)
chr5 (1-108)||(20910363-20910470)
chr5 (1-116)||(22119736-22119851)
chr5 (1-108)||(24494031-24494138)
chr5 (1-106)||(21985700-21985805)
chr5 (1-116)||(25431857-25431972)
chr5 (1-118)||(22075471-22075588)
chr5 (1-104)||(9078415-9078518)
chr5 (1-116)||(21871114-21871229)
chr5 (1-116)||(21875394-21875509)
chr5 (1-116)||(19660380-19660495)
chr5 (1-104)||(24529684-24529787)
chr5 (1-108)||(11580795-11580903)
chr5 (1-106)||(22106937-22107042)
chr5 (1-108)||(29916591-29916699)
chr5 (1-60)||(8286452-8286511)
chr5 (1-116)||(24766885-24766995)
chr5 (1-106)||(23201829-23201935)
chr5 (1-106)||(37724364-37724470)
chr5 (35-116)||(21498560-21498641)
chr5 (1-106)||(31342563-31342669)
chr5 (1-58)||(13095957-13096014)
chr5 (35-108)||(21329046-21329119)
chr5 (77-112)||(8286422-8286457)
chr5 (1-106)||(22959085-22959191)
chr5 (67-117)||(22144578-22144628)
chr5 (1-58)||(13025773-13025830)
chr5 (2-106)||(14079609-14079714)
chr5 (35-108)||(26011585-26011658)
chr5 (67-108)||(36154400-36154441)
chr5 (1-88)||(19669363-19669451)
chr5 (1-54)||(26742363-26742416)
chr5 (38-86)||(21741116-21741164)
chr5 (15-106)||(22177696-22177787)
[»] chr3 (54 HSPs)
chr3 (3-118)||(13442717-13442832)
chr3 (1-113)||(20697993-20698105)
chr3 (1-108)||(26687350-26687457)
chr3 (4-116)||(17499805-17499917)
chr3 (1-116)||(11424306-11424421)
chr3 (1-108)||(17247837-17247944)
chr3 (4-116)||(17488323-17488435)
chr3 (1-108)||(14666068-14666175)
chr3 (1-108)||(14735581-14735688)
chr3 (1-108)||(25475936-25476043)
chr3 (16-116)||(184318-184418)
chr3 (1-108)||(53070249-53070357)
chr3 (1-108)||(18438997-18439104)
chr3 (1-108)||(23082912-23083019)
chr3 (1-116)||(43842641-43842756)
chr3 (2-115)||(12851908-12852021)
chr3 (1-118)||(13209869-13209986)
chr3 (1-106)||(14179785-14179890)
chr3 (1-108)||(14973317-14973424)
chr3 (1-105)||(40213275-40213379)
chr3 (1-116)||(30030291-30030406)
chr3 (1-106)||(16809848-16809953)
chr3 (1-116)||(12399658-12399772)
chr3 (1-106)||(14576386-14576491)
chr3 (1-82)||(14669223-14669304)
chr3 (1-106)||(14573051-14573156)
chr3 (1-112)||(12933856-12933968)
chr3 (1-112)||(23408891-23409003)
chr3 (1-106)||(12340215-12340321)
chr3 (1-106)||(15877381-15877487)
chr3 (35-106)||(9513407-9513479)
chr3 (35-106)||(9521382-9521454)
chr3 (44-108)||(17247084-17247148)
chr3 (1-106)||(1644235-1644341)
chr3 (35-106)||(4588368-4588439)
chr3 (35-106)||(42386908-42386979)
chr3 (1-108)||(16104243-16104351)
chr3 (1-111)||(15471387-15471497)
chr3 (1-105)||(49389197-49389302)
chr3 (36-112)||(14234988-14235064)
chr3 (48-108)||(14669367-14669427)
chr3 (1-106)||(16097793-16097899)
chr3 (13-106)||(21837983-21838076)
chr3 (1-106)||(49667636-49667742)
chr3 (1-106)||(17524727-17524833)
chr3 (13-106)||(43927663-43927756)
chr3 (33-105)||(22109830-22109903)
chr3 (35-108)||(52523279-52523351)
chr3 (35-106)||(12171669-12171741)
chr3 (55-106)||(32308186-32308237)
chr3 (77-106)||(321567-321596)
chr3 (154-202)||(379353-379404)
chr3 (35-108)||(2050753-2050825)
chr3 (38-86)||(22791798-22791846)
[»] scaffold1842 (1 HSPs)
scaffold1842 (1-119)||(600-718)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-119)||(167530-167648)
scaffold0011 (1-116)||(52375-52490)
[»] scaffold0292 (3 HSPs)
scaffold0292 (1-116)||(805-920)
scaffold0292 (1-53)||(3933-3985)
scaffold0292 (76-116)||(3987-4027)
[»] scaffold0021 (3 HSPs)
scaffold0021 (1-116)||(125045-125160)
scaffold0021 (1-106)||(175227-175333)
scaffold0021 (1-106)||(63024-63130)
[»] scaffold0647 (1 HSPs)
scaffold0647 (1-118)||(5662-5779)
[»] chr2 (28 HSPs)
chr2 (1-118)||(23286313-23286430)
chr2 (1-118)||(23653951-23654068)
chr2 (1-108)||(23660485-23660592)
chr2 (1-116)||(27754038-27754153)
chr2 (1-104)||(28291857-28291960)
chr2 (1-104)||(298369-298473)
chr2 (1-116)||(23076903-23077016)
chr2 (25-116)||(23060817-23060908)
chr2 (1-106)||(20309557-20309662)
chr2 (1-108)||(22337578-22337685)
chr2 (1-116)||(22730776-22730891)
chr2 (1-104)||(22737735-22737838)
chr2 (1-108)||(32451479-32451587)
chr2 (3-106)||(37680-37783)
chr2 (1-104)||(23100785-23100889)
chr2 (1-106)||(22740513-22740619)
chr2 (35-106)||(40621762-40621833)
chr2 (1-106)||(22758268-22758374)
chr2 (34-108)||(7679792-7679866)
chr2 (1-114)||(24658100-24658213)
chr2 (35-106)||(22133769-22133841)
chr2 (47-105)||(23038541-23038599)
chr2 (66-107)||(20519670-20519711)
chr2 (76-105)||(22798680-22798709)
chr2 (1-105)||(22811488-22811593)
chr2 (37-106)||(25176341-25176410)
chr2 (72-108)||(22412612-22412648)
chr2 (48-108)||(23705830-23705890)
[»] scaffold0413 (1 HSPs)
scaffold0413 (1-113)||(15161-15273)
[»] scaffold2044 (1 HSPs)
scaffold2044 (1-116)||(999-1114)
[»] scaffold0839 (1 HSPs)
scaffold0839 (1-116)||(1621-1736)
[»] scaffold0175 (2 HSPs)
scaffold0175 (1-116)||(13555-13670)
scaffold0175 (1-106)||(34583-34688)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-112)||(21353-21464)
[»] scaffold0031 (2 HSPs)
scaffold0031 (1-116)||(19969-20084)
scaffold0031 (1-106)||(65346-65452)
[»] scaffold0352 (1 HSPs)
scaffold0352 (2-108)||(17559-17665)
[»] scaffold0389 (1 HSPs)
scaffold0389 (1-117)||(13150-13266)
[»] scaffold0358 (2 HSPs)
scaffold0358 (1-105)||(388-492)
scaffold0358 (1-105)||(5164-5268)
[»] scaffold0266 (1 HSPs)
scaffold0266 (4-108)||(18509-18613)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-113)||(16761-16873)
scaffold0056 (1-116)||(78905-79020)
[»] scaffold0627 (1 HSPs)
scaffold0627 (1-108)||(367-474)
[»] scaffold0540 (1 HSPs)
scaffold0540 (1-116)||(556-671)
[»] scaffold0228 (3 HSPs)
scaffold0228 (1-112)||(4971-5082)
scaffold0228 (1-112)||(12553-12664)
scaffold0228 (1-112)||(22505-22616)
[»] scaffold0122 (2 HSPs)
scaffold0122 (1-116)||(25608-25723)
scaffold0122 (1-105)||(33048-33152)
[»] scaffold0084 (1 HSPs)
scaffold0084 (1-112)||(10621-10732)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-105)||(23856-23960)
[»] scaffold0395 (2 HSPs)
scaffold0395 (1-108)||(513-620)
scaffold0395 (2-106)||(8044-8149)
[»] scaffold0124 (1 HSPs)
scaffold0124 (2-116)||(24193-24308)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-116)||(39474-39589)
scaffold0026 (1-104)||(40319-40422)
[»] scaffold0718 (1 HSPs)
scaffold0718 (1-106)||(4695-4800)
[»] scaffold0046 (1 HSPs)
scaffold0046 (1-118)||(14940-15057)
[»] scaffold0639 (1 HSPs)
scaffold0639 (1-85)||(8938-9022)
[»] scaffold0247 (1 HSPs)
scaffold0247 (4-116)||(6371-6483)
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-105)||(10607-10711)
[»] scaffold0876 (1 HSPs)
scaffold0876 (1-108)||(2636-2743)
[»] scaffold0347 (1 HSPs)
scaffold0347 (5-116)||(494-605)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-116)||(8076-8191)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-104)||(79887-79990)
[»] scaffold0490 (1 HSPs)
scaffold0490 (1-118)||(2404-2521)
[»] scaffold0351 (2 HSPs)
scaffold0351 (1-106)||(16731-16836)
scaffold0351 (76-106)||(16881-16911)
[»] scaffold0261 (2 HSPs)
scaffold0261 (1-118)||(16121-16238)
scaffold0261 (1-106)||(1800-1906)
[»] scaffold0100 (1 HSPs)
scaffold0100 (1-108)||(20575-20682)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-108)||(4986-5093)
[»] scaffold0120 (3 HSPs)
scaffold0120 (3-113)||(46390-46500)
scaffold0120 (3-108)||(32510-32615)
scaffold0120 (1-108)||(16549-16656)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-106)||(616-721)
[»] scaffold0456 (1 HSPs)
scaffold0456 (5-106)||(9990-10091)
[»] scaffold0427 (1 HSPs)
scaffold0427 (1-105)||(13947-14051)
[»] scaffold0346 (1 HSPs)
scaffold0346 (1-116)||(17267-17382)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-116)||(10373-10488)
[»] scaffold0107 (1 HSPs)
scaffold0107 (1-108)||(14981-15088)
[»] scaffold0423 (1 HSPs)
scaffold0423 (1-106)||(10825-10930)
[»] scaffold0403 (1 HSPs)
scaffold0403 (1-118)||(5300-5417)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-118)||(1986-2103)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-106)||(47438-47543)
[»] scaffold0221 (1 HSPs)
scaffold0221 (4-108)||(12360-12464)
[»] scaffold1992 (1 HSPs)
scaffold1992 (1-118)||(255-373)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-108)||(16150-16257)
[»] scaffold0218 (2 HSPs)
scaffold0218 (1-118)||(28821-28938)
scaffold0218 (39-108)||(7572-7641)
[»] scaffold0142 (1 HSPs)
scaffold0142 (1-108)||(17243-17351)
[»] scaffold0114 (2 HSPs)
scaffold0114 (1-106)||(15029-15134)
scaffold0114 (1-106)||(32829-32934)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-118)||(32516-32633)
[»] scaffold0364 (1 HSPs)
scaffold0364 (35-108)||(17171-17244)
[»] scaffold0555 (2 HSPs)
scaffold0555 (1-105)||(1042-1146)
scaffold0555 (35-118)||(10108-10192)
[»] scaffold0145 (1 HSPs)
scaffold0145 (8-119)||(39229-39330)
[»] scaffold0106 (3 HSPs)
scaffold0106 (7-106)||(1744-1844)
scaffold0106 (7-106)||(7721-7821)
scaffold0106 (5-103)||(16114-16213)
[»] scaffold0309 (1 HSPs)
scaffold0309 (1-108)||(7062-7168)
[»] scaffold0628 (1 HSPs)
scaffold0628 (35-109)||(2353-2427)
[»] scaffold0211 (1 HSPs)
scaffold0211 (1-106)||(28361-28467)
[»] scaffold0075 (1 HSPs)
scaffold0075 (1-63)||(7890-7952)
[»] scaffold0017 (2 HSPs)
scaffold0017 (2-108)||(190833-190939)
scaffold0017 (2-108)||(192536-192642)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-106)||(70256-70362)
[»] scaffold0503 (1 HSPs)
scaffold0503 (5-108)||(12395-12499)
[»] scaffold0130 (1 HSPs)
scaffold0130 (3-56)||(29001-29054)
[»] scaffold0034 (2 HSPs)
scaffold0034 (1-104)||(51438-51542)
scaffold0034 (35-108)||(33033-33105)
[»] scaffold0810 (1 HSPs)
scaffold0810 (1-108)||(3395-3503)
[»] scaffold0621 (1 HSPs)
scaffold0621 (1-104)||(6999-7103)
[»] scaffold1137 (1 HSPs)
scaffold1137 (35-106)||(1854-1925)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-106)||(2196-2302)
[»] scaffold0167 (1 HSPs)
scaffold0167 (1-116)||(35935-36050)
[»] scaffold0166 (1 HSPs)
scaffold0166 (1-116)||(9382-9492)
[»] scaffold0059 (1 HSPs)
scaffold0059 (54-116)||(19308-19370)
[»] scaffold0556 (2 HSPs)
scaffold0556 (1-104)||(7274-7378)
scaffold0556 (35-108)||(8513-8586)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-108)||(19729-19837)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-108)||(101857-101965)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-99)||(130370-130469)
[»] scaffold0324 (1 HSPs)
scaffold0324 (1-106)||(15861-15967)
[»] scaffold0216 (1 HSPs)
scaffold0216 (1-106)||(16674-16780)
[»] scaffold0028 (1 HSPs)
scaffold0028 (52-106)||(1-55)
[»] scaffold1895 (1 HSPs)
scaffold1895 (10-63)||(1-54)
[»] scaffold1257 (1 HSPs)
scaffold1257 (35-108)||(1850-1923)
[»] scaffold0032 (1 HSPs)
scaffold0032 (2-106)||(52032-52136)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-112)||(161148-161260)
[»] scaffold0476 (1 HSPs)
scaffold0476 (34-106)||(8297-8369)
[»] scaffold0138 (3 HSPs)
scaffold0138 (48-108)||(13450-13510)
scaffold0138 (1-106)||(29771-29877)
scaffold0138 (1-106)||(41767-41873)
[»] scaffold0507 (1 HSPs)
scaffold0507 (38-108)||(7608-7678)
[»] scaffold0101 (1 HSPs)
scaffold0101 (1-106)||(8510-8616)
[»] scaffold0078 (1 HSPs)
scaffold0078 (38-108)||(11028-11098)
[»] scaffold0131 (1 HSPs)
scaffold0131 (1-106)||(36918-37023)
[»] scaffold0022 (1 HSPs)
scaffold0022 (65-106)||(80863-80904)
[»] scaffold1984 (1 HSPs)
scaffold1984 (5-105)||(597-697)
[»] scaffold0333 (2 HSPs)
scaffold0333 (1-105)||(7076-7180)
scaffold0333 (1-105)||(14456-14560)
[»] scaffold0149 (2 HSPs)
scaffold0149 (3-106)||(4181-4285)
scaffold0149 (3-106)||(8612-8716)
[»] scaffold0139 (1 HSPs)
scaffold0139 (1-45)||(20443-20487)
[»] scaffold0475 (1 HSPs)
scaffold0475 (4-102)||(9542-9641)
[»] scaffold0273 (1 HSPs)
scaffold0273 (48-111)||(8986-9049)
[»] scaffold0020 (2 HSPs)
scaffold0020 (1-100)||(15389-15488)
scaffold0020 (1-106)||(179112-179217)
[»] scaffold0210 (2 HSPs)
scaffold0210 (76-106)||(21359-21389)
scaffold0210 (76-106)||(29251-29281)
[»] scaffold0174 (1 HSPs)
scaffold0174 (1-106)||(18006-18112)
[»] scaffold0040 (1 HSPs)
scaffold0040 (66-108)||(103136-103178)
[»] scaffold0530 (1 HSPs)
scaffold0530 (34-111)||(576-653)
[»] scaffold0357 (1 HSPs)
scaffold0357 (33-104)||(3264-3335)


Alignment Details
Target: chr1 (Bit Score: 100; Significance: 1e-49; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 50209872 - 50209757
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||    
T  50209872 caactcaaaagtcaaaatcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgatgtgcaactcgc 50209773  T
Q  101 gaggcggggaaaggtt 116  Q
    ||||||||||||||||    
T  50209772 gaggcggggaaaggtt 50209757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 22354230 - 22354123
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||    
T  22354230 caactcaaaagtcaaaatcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgtgacgtgcaactcgc 22354131  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  22354130 gaggcggg 22354123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 22355843 - 22355726
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||| |  |||||||||||  |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  22355843 caactcaaaagtcaaaattatgaaatcttgcatgttctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgc 22355744  T
Q  101 gaggcggggaaaggttac 118  Q
    ||||||||||||||||||    
T  22355743 gaggcggggaaaggttac 22355726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 27250398 - 27250281
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||| || || ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  27250398 caactcaaaagtcaatattacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgc 27250299  T
Q  101 gaggcggggaaaggttac 118  Q
    ||| |||||||| |||||    
T  27250298 gagacggggaaaagttac 27250281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 21301196 - 21301081
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||| |    
T  21301196 caactcaaaagtcaaaatcacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcagctgctcgctatggcgaggtgcgacgtgcaactcac 21301097  T
Q  101 gaggcggggaaaggtt 116  Q
    ||||||||||||||||    
T  21301096 gaggcggggaaaggtt 21301081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 433470 - 433576
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||||||  |||||||||  |||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  433470 caactcaaaagtcaaaatcacggaatcttgcaagctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgc 433569  T
Q  101 gaggcgg 107  Q
    |||||||    
T  433570 gaggcgg 433576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 34510243 - 34510350
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| ||| || | ||||||||||||| | |||||||||||    
T  34510243 caactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctactcgatatggcgagctgcaaggtgcaactcgc 34510342  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  34510343 gaggcggg 34510350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 21027132 - 21027249
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||| |||||||| ||||| |||||||| |||||||||| ||||||||||||||||||   || | || |||||||||||| |||||||||||||    
T  21027132 caactcaaaggtcaaaattacaaattcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgccatggcgagctgcaacgtgcaactcgc 21027231  T
Q  101 gaggcggggaaaggttac 118  Q
    ||||||||||||||||||    
T  21027232 gaggcggggaaaggttac 21027249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 20135651 - 20135766
Alignment:
Q  2 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||| ||||||| |||||| |||||||||||||||||||| ||||||||| |||||| |||||||| ||  || |||| ||||||||    
T  20135651 aactcaaaagtcaaaattacaaaatattgcatgctctctggtcaagctcgctatggcgagttcatctgctcgctatggcaagtcgcaacgtacaactcgc 20135750  T
Q  101 gaggcggggaaaggtt 116  Q
    ||||||||||||||||    
T  20135751 gaggcggggaaaggtt 20135766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 22532736 - 22532839
Alignment:
Q  5 tcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 104  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||| | ||||||| |||||| |||||||||||||||   |||||||||||||||    
T  22532736 tcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctcgacgagttcatctgctcgctatggcgagctgcagggtgcaactcgcgagg 22532835  T
Q  105 cggg 108  Q
    ||||    
T  22532836 cggg 22532839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 20846888 - 20846771
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||| |||||||| |||||||||||||| |||||||||| ||||||||||||||||||   || | || |||||||| ||| |||||||||||||    
T  20846888 caactcaaaggtcaaaattacaaaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgccatggcgagttgcaacgtgcaactcgc 20846789  T
Q  101 gaggcggggaaaggttac 118  Q
    ||||||||||||| ||||    
T  20846788 gaggcggggaaagattac 20846771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 20919064 - 20919175
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||| |||||||| | |||||||||||| |||||||||| ||||||||||||||||||   || | || |||||||||||| ||||||||||||     
T  20919064 caactcaaaggtcaaaattataaaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgccatggcgagctgcaacgtgcaactcgt 20919163  T
Q  101 gaggcggggaaa 112  Q
    ||||||||||||    
T  20919164 gaggcggggaaa 20919175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 22357529 - 22357444
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 86  Q
    |||||||||||||||||| |  |||||||||||  |||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  22357529 caactcaaaagtcaaaattatgaaatcttgcatgttctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgc 22357444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 38801060 - 38800955
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  |  ||||||||||| |||||||||| ||||||||||| |||||| |||| | ||| ||||||||||||||||||||||||     
T  38801060 caactcaaaagtcaaaaatatgaaatcttgcatgctctctggtctagctcgctaggtgagttcatctgttcgctgtggcgagctgcgacgtgcaactcgt 38800961  T
Q  101 gaggcg 106  Q
    ||||||    
T  38800960 gaggcg 38800955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 20091131 - 20091026
Alignment:
Q  2 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 101  Q
    ||||||||||||||||  |  ||||||||||| ||||||||||||||||||||||||||||   ||||| ||  ||||||| ||| ||||| ||||||||    
T  20091131 aactcaaaagtcaaaaataagaaatcttgcatgctctctggtcaagctcgctaggcgagttaggctgctcgcggtggcgagttgcaacgtgaaactcgcg 20091032  T
Q  102 aggcgg 107  Q
    ||||||    
T  20091031 aggcgg 20091026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 20228445 - 20228364
Alignment:
Q  35 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 116  Q
    |||||| ||||||||||| ||||||||||  ||||| ||||| ||||||||| ||||||||||||||||||| |||||||||    
T  20228445 ctctctagtcaagctcgcgaggcgagttcaactgctcgctatcgcgagctgcaacgtgcaactcgcgaggcgaggaaaggtt 20228364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 22468355 - 22468243
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||  || ||||||| ||| ||||||| ||| |||||||| |||||||||   || | ||| ||||||||||||||||||||||||    
T  22468355 caactcaaaagtcaaaactacgaaatcttacatgctctctgttcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcg 22468256  T
Q  100 cgaggcggggaaa 112  Q
    | ||||| |||||    
T  22468255 caaggcgaggaaa 22468243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 33681472 - 33681578
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||| || |||||| |    ||||||||||| |||||||| ||||||||| |||| | ||||||||||||||| | | ||||||||    
T  33681472 caactcaaaagtcaaaattacgaaatctgggtagctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcaaggagcaactcg 33681571  T
Q  100 cgaggcg 106  Q
    |||||||    
T  33681572 cgaggcg 33681578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 22921525 - 22921418
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||| |||||||| || ||||| ||    |||||||||||  ||||||||| ||||   |||||| ||||||||||||||| | |||||||||||    
T  22921525 caactcaaaggtcaaaattacgaaatcatgacagctctctggtcacactcgctaggtgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgc 22921426  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  22921425 gaggcggg 22921418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 43697823 - 43697930
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||| |||||||||||| || ||||| ||    |||||||||||  ||||||||||||||   |||||| ||||||| ||||||| | ||||||||| |    
T  43697823 caacttaaaagtcaaaattacgaaatcatgacagctctctggtcacactcgctaggcgagtgaatctgctcgctatggtgagctgcaaggtgcaactcac 43697922  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  43697923 gaggcggg 43697930  T

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Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 21162194 - 21162244
Alignment:
Q  4 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta 54  Q
    |||||||||||||| |||| |||||||||| |||||||||| |||||||||    
T  21162194 ctcaaaagtcaaaaacacagaatcttgcatgctctctggtctagctcgcta 21162244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 21754577 - 21754611
Alignment:
Q  72 gctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    |||||||||||||||||||||||||||||||||||    
T  21754577 gctatggcgagctgcgacgtgcaactcgcgaggcg 21754611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 33798003 - 33798084
Alignment:
Q  35 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 116  Q
    |||||||||||||||||| |||||||      | || ||||||||||||||| |||||||||||||||| || |||||||||    
T  33798003 ctctctggtcaagctcgcgaggcgagggatattactcgctatggcgagctgcaacgtgcaactcgcgagacgaggaaaggtt 33798084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 105
Target Start/End: Original strand, 20248774 - 20248845
Alignment:
Q  35 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 105  Q
    ||||||||||| ||| |||| |||||||||  ||| | ||||||||||| ||||| ||||||||||||||||    
T  20248774 ctctctggtcatgcttgctatggcgagttcaactgttcgctatggcgagttgcgaggtgcaactcgcgaggc 20248845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 108
Target Start/End: Complemental strand, 35260668 - 35260629
Alignment:
Q  69 cttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  35260668 cttgctatggcgagctgcaaggtgcaactcgcgaggcggg 35260629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 106
Target Start/End: Original strand, 45307764 - 45307859
Alignment:
Q  12 tcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    |||||||||| | ||||||||  |||||||||||  ||||||| |||||||     |||| |||||||||||||||||  ||||||||||||||||    
T  45307764 tcaaaatcacgagatcttgcaagctctctggtcacactcgctacggcgagtaaacttgctcgctatggcgagctgcgaaatgcaactcgcgaggcg 45307859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 20637347 - 20637421
Alignment:
Q  34 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    ||||||||||||  |||| |||||||||   ||| || ||||||||||||||| | ||||||||| |||||||||    
T  20637347 cctctctggtcacactcggtaggcgagtgaatctactcgctatggcgagctgcaaggtgcaactctcgaggcggg 20637421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 42864870 - 42864764
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||  ||| |||  | ||| ||||||||||| |||||||  |||||||  |  || | |||  |||||||||||||||||||||||    
T  42864870 caactcaaaagtcaaaaatacagaattctacatgctctctggtcatgctcgctgtggcgagtaacattgttcgctgcggcgagctgcgacgtgcaactcg 42864771  T
Q  100 cgaggcg 106  Q
    |||||||    
T  42864770 cgaggcg 42864764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 26065520 - 26065561
Alignment:
Q  66 ctgcttgctatggcgagctgcgacgtgcaactcgcgaggcgg 107  Q
    ||||| ||||||||||||||| | ||||||||||||||||||    
T  26065520 ctgctcgctatggcgagctgcaaggtgcaactcgcgaggcgg 26065561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 35981308 - 35981260
Alignment:
Q  38 tctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 86  Q
    ||||||||  |||||||||||||||  |||||| |||||||||||||||    
T  35981308 tctggtcacactcgctaggcgagttaatctgctcgctatggcgagctgc 35981260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 3e-47; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 18818068 - 18817953
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  18818068 caactcaaaagtcaaaatcatgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgc 18817969  T
Q  101 gaggcggggaaaggtt 116  Q
    ||||||||||||||||    
T  18817968 gaggcggggaaaggtt 18817953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 18878895 - 18878780
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  18878895 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgc 18878796  T
Q  101 gaggcggggaaaggtt 116  Q
    || |||||||||||||    
T  18878795 gatgcggggaaaggtt 18878780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 19801085 - 19800970
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||    
T  19801085 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgc 19800986  T
Q  101 gaggcggggaaaggtt 116  Q
    |||||| |||||||||    
T  19800985 gaggcgaggaaaggtt 19800970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 20536671 - 20536786
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||||    
T  20536671 caactcgaaagtcaaaatcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctatgacgtgcaactcgc 20536770  T
Q  101 gaggcggggaaaggtt 116  Q
    ||||||||||||||||    
T  20536771 gaggcggggaaaggtt 20536786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 23406844 - 23406959
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  23406844 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggccagttcatctgctcgttatggcgagctgcgacgtgcaactcgc 23406943  T
Q  101 gaggcggggaaaggtt 116  Q
    ||||||||||||||||    
T  23406944 gaggcggggaaaggtt 23406959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 21923586 - 21923479
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||    
T  21923586 caactcaaaagtcaaaatcacaaaatctcacatgctctctggtcaagctcgctaggcgagtacgtctgctcgctatggcgagctgcgacgtgcaactcgc 21923487  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  21923486 gaggcggg 21923479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 16091999 - 16091888
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| |||||| ||||||||||||| ||| |||||||||||    
T  16091999 caactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagcttcgatgtgcaactcgc 16091900  T
Q  101 gaggcggggaaa 112  Q
    ||||| ||||||    
T  16091899 gaggctgggaaa 16091888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 28648702 - 28648595
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||||    
T  28648702 caactcaaaagtcaaaatcacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgc 28648603  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  28648602 gaggcggg 28648595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 5865935 - 5865830
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | |||||||||||||||||||||||||||||    
T  5865935 caactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgc 5865836  T
Q  101 gaggcg 106  Q
    ||||||    
T  5865835 gaggcg 5865830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 31971707 - 31971812
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||| |||| ||||||||||||| |||| | |||||||||||||||||||||||||||||    
T  31971707 caactcaaaagtcaaaaacacgaaatcttgcatgctctctggtctagctagctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgc 31971806  T
Q  101 gaggcg 106  Q
    ||||||    
T  31971807 gaggcg 31971812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 41598647 - 41598752
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||||||  |||| ||||  ||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||    
T  41598647 caactcaaaagtcaaaatcacggaatcctgcaagctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgc 41598746  T
Q  101 gaggcg 106  Q
    ||||||    
T  41598747 gaggcg 41598752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 22875529 - 22875635
Alignment:
Q  2 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 101  Q
    |||||||| ||||||||||| ||||||||||  ||||||||||||||||||||||||||||| |||||| |||||||| |||||| | ||||||||||||    
T  22875529 aactcaaaggtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcaagctgcaaggtgcaactcgcg 22875628  T
Q  102 aggcggg 108  Q
    |||||||    
T  22875629 aggcggg 22875635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 17141376 - 17141477
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||| ||||  |||||||||||||| ||||||||||||||||||||||||||||| |||| | |||||||||||||||||| ||||||||||    
T  17141376 caactcaaaagtaaaaaatacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacatgcaactcgc 17141475  T
Q  101 ga 102  Q
    ||    
T  17141476 ga 17141477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 21249844 - 21249949
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||   | ||||||||||| |||||||||| |||||||||||||||||| |||| | |||||||||||||||||||||||||||||    
T  21249844 caactcaaaagtcaaaaatgcgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgc 21249943  T
Q  101 gaggcg 106  Q
    ||||||    
T  21249944 gaggcg 21249949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 45130685 - 45130584
Alignment:
Q  5 tcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 104  Q
    |||||||||||||  || |||||||||||  |||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||    
T  45130685 tcaaaagtcaaaaatacgaaatcttgcatggtctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgagg 45130586  T
Q  105 cg 106  Q
    ||    
T  45130585 cg 45130584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 6759720 - 6759827
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||  |||||| |||||||| ||||||||||||| |||||| |||||||||||||||   |||||||||||    
T  6759720 caactcaaaagtcaaaatcacgaaatcttgcaagctctctagtcaagcttgctaggcgagttcatctgctcgctatggcgagctgcatggtgcaactcgc 6759819  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  6759820 gaggcggg 6759827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 22627198 - 22627305
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| | |||| | |||||| ||||||   |||||||||||    
T  22627198 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatatgctcgatatggcaagctgcagggtgcaactcgc 22627297  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  22627298 gaggcggg 22627305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 21255682 - 21255787
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||   | ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||||||||| |||||||||||    
T  21255682 caactcaaaagtcaaaaatgcgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgatgtgcaactcgc 21255781  T
Q  101 gaggcg 106  Q
    ||||||    
T  21255782 gaggcg 21255787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 21918668 - 21918563
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||| || ||||||||||| || ||||||||| ||||||||||||||||   || | |||||||||||||||||||||||||||||    
T  21918668 caactcaaaagtcaaaattacgaaatcttgcatgctgtctggtcaatctcgctaggcgagttcaagtgttcgctatggcgagctgcgacgtgcaactcgc 21918569  T
Q  101 gaggcg 106  Q
    ||||||    
T  21918568 gaggcg 21918563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 16199316 - 16199220
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 97  Q
    |||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||    
T  16199316 caactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaact 16199220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 7373212 - 7373328
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 98  Q
    |||||||||||||||||| || |||| ||| ||  ||||||||||| |||||||| ||||||||| |||||| |||||||||||||||||||||||||||    
T  7373212 caactcaaaagtcaaaattacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgctcgctatggcgagctgcgacgtgcaactc 7373310  T
Q  99 gcgaggcggggaaaggtt 116  Q
    ||||||| ||||||||||    
T  7373311 gcgaggcagggaaaggtt 7373328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 23649016 - 23649131
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||| ||  ||||||||||| |||||| ||||||||||||||||||||||   |||| ||||||||||| ||| || || ||||||     
T  23649016 caactcaaaagtcaaaaacatgaaatcttgcatgctctctagtcaagctcgctaggcgagttcagttgctcgctatggcgagttgcaacatgtaactcgg 23649115  T
Q  101 gaggcggggaaaggtt 116  Q
    |||||| |||||||||    
T  23649116 gaggcgaggaaaggtt 23649131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 21389111 - 21389005
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||  || ||||||||||| ||||||||||| |||||||| |||||||||   || | ||| ||||||||||||||||||||||||    
T  21389111 caactcaaaagtcaaaaatacgaaatcttgcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcg 21389012  T
Q  100 cgaggcg 106  Q
    |||||||    
T  21389011 cgaggcg 21389005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 21860136 - 21860063
Alignment:
Q  35 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    ||||||||||||||||||||||||||| | |||||| ||||||| ||||||||||| |||||||||||||||||    
T  21860136 ctctctggtcaagctcgctaggcgagtacgtctgctcgctatggtgagctgcgacgagcaactcgcgaggcggg 21860063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 21491455 - 21491549
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaa 95  Q
    ||||| |||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||   || | ||| ||||||||||| ||||||||    
T  21491455 caacttaaaagtcaaaattacaaaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgctgtggcgagctgcaacgtgcaa 21491549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 21286718 - 21286791
Alignment:
Q  35 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    |||||||||||  ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  21286718 ctctctggtcacactcgctaggcgagtggatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 21286791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 106
Target Start/End: Complemental strand, 21395629 - 21395529
Alignment:
Q  7 aaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 105  Q
    |||||||||||  || |||||| |||| ||||||||||| |||||||| |||||||||   || | ||| ||| ||||||||||||||||||||||||||    
T  21395629 aaaagtcaaaagtacgaaatctggcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggtgagctgcgacgtgcaactcgcgaggc 21395530  T
Q  106 g 106  Q
    |    
T  21395529 g 21395529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 106
Target Start/End: Complemental strand, 21790122 - 21790022
Alignment:
Q  7 aaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 105  Q
    |||||||||||  || |||||| |||| ||||||||||| |||||||| |||||||||   || | ||| ||| ||||||||||||||||||||||||||    
T  21790122 aaaagtcaaaagtacgaaatctggcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggtgagctgcgacgtgcaactcgcgaggc 21790023  T
Q  106 g 106  Q
    |    
T  21790022 g 21790022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 26355356 - 26355250
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||| || |||||| |    |||| |||||| ||||| || ||||||||| |||| |||| |||||||||||||| |||||||||     
T  26355356 caactcaaaagtcaaaattacgaaatctggatagctctttggtcatgctcgttatggcgagttcatctgtttgccatggcgagctgcgaggtgcaactca 26355257  T
Q  100 cgaggcg 106  Q
    |||||||    
T  26355256 cgaggcg 26355250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 23760464 - 23760392
Alignment:
Q  35 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    ||||||||||| |||||||| ||||||||| |||||| || |||| ||||||||| |||||||||| ||||||    
T  23760464 ctctctggtcatgctcgctatggcgagttcatctgctcgcgatggtgagctgcgaggtgcaactcgtgaggcg 23760392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 6520831 - 6520942
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||| ||| |||||||| || ||||| ||   ||||||| ||||  || |||||||||||   |||||| | ||||||||||||| | |||||||||||    
T  6520831 caacttaaaggtcaaaattacgaaatcatgatgcctctctagtcacacttgctaggcgagtgaatctgctcgttatggcgagctgcaaggtgcaactcgc 6520930  T
Q  101 gaggcggggaaa 112  Q
    ||||||||||||    
T  6520931 gaggcggggaaa 6520942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 21674168 - 21674274
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||| || |||||| |    ||||||||||| |||||||| ||||||||| |||| |  |  |||||||||||||  |||||||||    
T  21674168 caactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctcgctatggcgagttcatctgttcacgttggcgagctgcgagatgcaactcg 21674267  T
Q  100 cgaggcg 106  Q
    |||||||    
T  21674268 cgaggcg 21674274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 22526099 - 22526140
Alignment:
Q  65 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    |||||||||||||||||||||| || ||||||||||||||||    
T  22526099 tctgcttgctatggcgagctgcaacatgcaactcgcgaggcg 22526140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 37116051 - 37115978
Alignment:
Q  33 tcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    ||||| |||||||| ||||||| |||||||   |||||| ||||||||||||||| || ||||||||||||||||    
T  37116051 tcctcactggtcaaactcgctatggcgagtga-tctgctcgctatggcgagctgcaacatgcaactcgcgaggcg 37115978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 17439023 - 17438982
Alignment:
Q  65 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    |||||| ||||||||||||||| || ||||||||||||||||    
T  17439023 tctgctcgctatggcgagctgcaacatgcaactcgcgaggcg 17438982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 22365266 - 22365307
Alignment:
Q  65 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  22365266 tctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 22365307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 5610259 - 5610211
Alignment:
Q  38 tctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 86  Q
    ||||||||  |||||||||||||||  |||||| |||||||||||||||    
T  5610259 tctggtcacactcgctaggcgagttaatctgctcgctatggcgagctgc 5610211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 3e-47; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 12699295 - 12699410
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  12699295 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgacttcatctgcttgctatggcgagctgcgacgtgcaactcgc 12699394  T
Q  101 gaggcggggaaaggtt 116  Q
    |||| |||||||||||    
T  12699395 gaggtggggaaaggtt 12699410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 9509652 - 9509767
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  9509652 caactcaaaagtcaaaatcatgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcaagctgcgacgtgcaactcgc 9509751  T
Q  101 gaggcggggaaaggtt 116  Q
    ||||||||||||||||    
T  9509752 gaggcggggaaaggtt 9509767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 38227943 - 38228050
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  38227943 caactcaaaagtcaaaatcacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgc 38228042  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  38228043 gaggcggg 38228050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 39267304 - 39267189
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| |||||||||||||    
T  39267304 caactcaaaagtcaaaatcacaaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgc 39267205  T
Q  101 gaggcggggaaaggtt 116  Q
    |||||| |||||||||    
T  39267204 gaggcgaggaaaggtt 39267189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 9751208 - 9751093
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| ||||| |||||||    
T  9751208 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgtaactcgc 9751109  T
Q  101 gaggcggggaaaggtt 116  Q
    |||||| |||||||||    
T  9751108 gaggcgaggaaaggtt 9751093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 3564022 - 3563915
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||| || ||||||||||  ||||||||||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||||    
T  3564022 caactcaaaagtcaaaataacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgc 3563923  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  3563922 gaggcggg 3563915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 26212448 - 26212562
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||   || | || |||||||||||| |||||||||||||    
T  26212448 caactcaaaagtcaaaattacaaaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgccatggcgagctgcaacgtgcaactcgc 26212547  T
Q  101 gaggcggggaaaggt 115  Q
    |||||||||||||||    
T  26212548 gaggcggggaaaggt 26212562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 27847502 - 27847397
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||||||| |||||||||||||    
T  27847502 caactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcaacgtgcaactcgc 27847403  T
Q  101 gaggcg 106  Q
    ||||||    
T  27847402 gaggcg 27847397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 18302641 - 18302756
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||| || ||||||||||| ||||||||||| |||||| ||||||||||  ||||| | | ||||||||||| |||||||||||||    
T  18302641 caactcaaaagtcaaaattacgaaatcttgcatgctctctggtcaggctcgcgaggcgagttcaactgctcgttgtggcgagctgcaacgtgcaactcgc 18302740  T
Q  101 gaggcggggaaaggtt 116  Q
    |||||| |||||||||    
T  18302741 gaggcgaggaaaggtt 18302756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 11995716 - 11995599
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  || ||||||||||| |||||||||||||||||||||||||||||   || || | |||||||||||| || ||||||| ||    
T  11995716 caactcaaaagtcaaaaatacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcaagtgttttccatggcgagctgcaacatgcaacttgc 11995617  T
Q  101 gaggcggggaaaggttac 118  Q
    ||||||||||||||||||    
T  11995616 gaggcggggaaaggttac 11995599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 34201246 - 34201351
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||  | ||||||||||||||||| |||||||||||    
T  34201246 caactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctattcgctatggcgagctgcgatgtgcaactcgc 34201345  T
Q  101 gaggcg 106  Q
    ||||||    
T  34201346 gaggcg 34201351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 10866135 - 10866051
Alignment:
Q  154 tagtgtggcttagcaagacgtttaataaaaagggcaagattgtcatttcctcctatatgggccacgtttcccccttttccccttcat 240  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||    
T  10866135 tagtgtggcttagcaagacttttaataaaaagggcaagattgtcattt-ttcctatatgggccacg-ttcccccttttccccttcat 10866051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 15754545 - 15754428
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||   | ||||||||||| |||||||||||||||||||||||||||||   || |  | |||||||| |||||||||||||||||    
T  15754545 caactcaaaagtcaaaaattcgaaatcttgcatgctctctggtcaagctcgctaggcgagttcaagtgttcaccatggcgagatgcgacgtgcaactcgc 15754446  T
Q  101 gaggcggggaaaggttac 118  Q
    |||||||||||| |||||    
T  15754445 gaggcggggaaaagttac 15754428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 40443840 - 40443957
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  || ||||||||||| || ||||||| ||||||||||||||||||   || | ||  ||||||||||| |||||||||||||    
T  40443840 caactcaaaagtcaaaaatacgaaatcttgcatgctttctggtctagctcgctaggcgagttcaagtgttcgccgtggcgagctgcaacgtgcaactcgc 40443939  T
Q  101 gaggcggggaaaggttac 118  Q
    ||||||||||||||||||    
T  40443940 gaggcggggaaaggttac 40443957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 105
Target Start/End: Complemental strand, 15143688 - 15143590
Alignment:
Q  7 aaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 105  Q
    ||||||||||||||| |||||| |||   ||||||||||||||||| |||||||||| |||||| ||||||||||||||| | ||||| ||||||||||    
T  15143688 aaaagtcaaaatcacgaaatctcgcaagttctctggtcaagctcgcaaggcgagttcatctgctcgctatggcgagctgcaaggtgcacctcgcgaggc 15143590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 16385916 - 16385812
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||| |||||||||||||| ||||||| || ||||||||||||||||||   || | | | ||||||||||| |||||||||||||    
T  16385916 caactcaaaagtcaaaattacaaaatcttgcatgctctctgatctagctcgctaggcgagttcaagtgttcgttgtggcgagctgcaacgtgcaactcgc 16385817  T
Q  101 gaggc 105  Q
     ||||    
T  16385816 aaggc 16385812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 810787 - 810681
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||| || |||||| |    ||||||||||| |||||||| ||||||||| |||||| ||| ||||||||||||| ||||||||||    
T  810787 caactcaaaagtcaaaattacgaaatctggatggctctctggtcatgctcgctatggcgagttcatctgctcgctgtggcgagctgcgaggtgcaactcg 810688  T
Q  100 cgaggcg 106  Q
    |||||||    
T  810687 cgaggcg 810681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 19649143 - 19649037
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||  || ||||||||||| ||||||||||| |||||||| |||||||||   || | ||| |||||||||||||||||||||| |    
T  19649143 caactcaaaagtcaaaactacgaaatcttgcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaacttg 19649044  T
Q  100 cgaggcg 106  Q
    |||||||    
T  19649043 cgaggcg 19649037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 28504959 - 28504897
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttc 63  Q
    |||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  28504959 caactcaaaagtcaaaattacaaaatcttgcatgctctctggtctagctcgctaggcgagttc 28504897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 12756375 - 12756268
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 98  Q
    |||||||||||||||||| || |||| ||| ||  |||||| |||| |||||||| ||||||||| |||||| || ||||||||||||||||||||||||    
T  12756375 caactcaaaagtcaaaattacgaaat-ttggatagctctctagtcatgctcgctatggcgagttcatctgctcgcgatggcgagctgcgacgtgcaactc 12756277  T
Q  99 gcgaggcgg 107  Q
    |||||||||    
T  12756276 gcgaggcgg 12756268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 2831964 - 2831905
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgag 60  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||    
T  2831964 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgag 2831905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 21064809 - 21064717
Alignment:
Q  12 tcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgag 103  Q
    |||||||||||||||||||||  |||||||||||  ||||||| |||||||     |||||||||||||||||||||| ||||||||||||||    
T  21064809 tcaaaatcacaaaatcttgcaagctctctggtcacactcgctacggcgagtaaacttgcttgctatggcgagctgcgaagtgcaactcgcgag 21064717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 24054929 - 24055035
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||  |||||||||||||| | ||||||||| |||||||| |||| ||||    | | | | ||||||||||||||||||||||||    
T  24054929 caactcaaaagtcaaaactacaaaatcttgcatgcactctggtcatgctcgctatggcgtgttcagtcgttcgttgtggcgagctgcgacgtgcaactcg 24055028  T
Q  100 cgaggcg 106  Q
    |||||||    
T  24055029 cgaggcg 24055035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 16219340 - 16219267
Alignment:
Q  35 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    |||||||||||  ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  16219340 ctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 16219267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 106
Target Start/End: Original strand, 44117001 - 44117073
Alignment:
Q  35 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    ||||||||||| ||||| || ||||||||| |||||| ||||||| ||||||||| |||||||||||||||||    
T  44117001 ctctctggtcatgctcgttatggcgagttcatctgctcgctatggtgagctgcgatgtgcaactcgcgaggcg 44117073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 47832271 - 47832378
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||| ||| |||||||| || ||||| ||   ||||||||||||  ||||||||||||||   |||||| ||||||||||||||| |  ||||||||||    
T  47832271 caacttaaaggtcaaaattacgaaatcatgatacctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaagatgcaactcgc 47832370  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  47832371 gaggcggg 47832378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 68209 - 68315
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||| || |||||| |    ||||||||||| |||||||| ||||||||| |||| |  |||||| ||||||||| ||||| ||||    
T  68209 caactcaaaagtcaaaattacgaaatctggatatctctctggtcatgctcgctatggcgagttcatctgatcactatggtgagctgcgaggtgcacctcg 68308  T
Q  100 cgaggcg 106  Q
    |||||||    
T  68309 cgaggcg 68315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 11880713 - 11880819
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||  ||| |||  | ||| ||||||||||| |||||||| |||||||  |  || | ||| ||||||||||||||||||||||||    
T  11880713 caactcaaaagtcaaaagtacagaattctacatgctctctggtcatgctcgctatggcgagtaacattgttcgctgtggcgagctgcgacgtgcaactcg 11880812  T
Q  100 cgaggcg 106  Q
    |||||||    
T  11880813 cgaggcg 11880819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 106
Target Start/End: Original strand, 9703772 - 9703811
Alignment:
Q  67 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  9703772 tgctcgctatggcgagctgcgacgtgcaactcgcgaggcg 9703811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 18006104 - 18006210
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||| || |||||| |    ||||||||||| |||||||| || |||||| |||| | |||||| |||||| ||| |||||| |||    
T  18006104 caactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctcgctatggtgagttcatctgttcgctatgacgagcttcgaagtgcaattcg 18006203  T
Q  100 cgaggcg 106  Q
    |||||||    
T  18006204 cgaggcg 18006210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 44014637 - 44014743
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||| || |||||| |    ||||||||||| |||||||| ||||||||| |||| | |||||| | |  ||||| ||||||||||    
T  44014637 caactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatgacaatttgcgaggtgcaactcg 44014736  T
Q  100 cgaggcg 106  Q
    |||||||    
T  44014737 cgaggcg 44014743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 9389308 - 9389267
Alignment:
Q  67 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    |||| ||||||||||||||||| |||||||||||||||||||    
T  9389308 tgctcgctatggcgagctgcgaggtgcaactcgcgaggcggg 9389267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 106
Target Start/End: Original strand, 4993960 - 4994055
Alignment:
Q  12 tcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    |||||||||| | ||||||||  |||||||||||  ||||||| |||||||     |||| |||||||||||||||||  ||||||||||||||||    
T  4993960 tcaaaatcacgagatcttgcaagctctctggtcacactcgctacggcgagtaaacttgctcgctatggcgagctgcgaaatgcaactcgcgaggcg 4994055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 3272248 - 3272354
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||| || ||||    ||| ||||||||||| |||||||| |||||||     |||| ||||||||||||| |||| || ||||||    
T  3272248 caactcaaaagtcaaaattacgaaattcaacatgctctctggtcatgctcgctatggcgagtaaggttgctcgctatggcgagctacgacatgtaactcg 3272347  T
Q  100 cgaggcg 106  Q
    |||||||    
T  3272348 cgaggcg 3272354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 17061573 - 17061532
Alignment:
Q  67 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    |||| |||||||||||||||||| |||||||| |||||||||    
T  17061573 tgctcgctatggcgagctgcgacatgcaactcacgaggcggg 17061532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 3e-47; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 22779885 - 22779770
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  22779885 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatcttctcgctatggcgagctgcgacgtgcaactcgc 22779786  T
Q  101 gaggcggggaaaggtt 116  Q
    ||||||||||||||||    
T  22779785 gaggcggggaaaggtt 22779770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 17287454 - 17287339
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||     
T  17287454 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctacgacgtgcaactcgt 17287355  T
Q  101 gaggcggggaaaggtt 116  Q
    ||||||||||||||||    
T  17287354 gaggcggggaaaggtt 17287339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 27415612 - 27415497
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| |||||||||||||    
T  27415612 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgc 27415513  T
Q  101 gaggcggggaaaggtt 116  Q
    |||||| |||||||||    
T  27415512 gaggcgaggaaaggtt 27415497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 20637952 - 20637835
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||| || |||||||| || |||| ||||||||||| |||||| ||||| |||||| |||||||||||||||||||||||||||||    
T  20637952 caactcaaaagtcaaaattacgaaatcttggatgctctttggtcaagctcactaggcaagttcatctgctcgctatggcgagctgcgacgtgcaactcgc 20637853  T
Q  101 gaggcggggaaaggttac 118  Q
    |||||||||||| |||||    
T  20637852 gaggcggggaaaagttac 20637835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 28496131 - 28496024
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||| |||||||| ||||||| ||| ||||||||||||||||||||||||||||| |||| | |||||||||||||| ||||||||||||||    
T  28496131 caactcaaaagttaaaatcacgaaatcttacatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgtgacgtgcaactcgc 28496032  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  28496031 gaggcggg 28496024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 29808541 - 29808434
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||| |||||||| ||||||| ||| ||||||||||||||||||||||||||||| |||| | |||||||||||||| ||||||||||||||    
T  29808541 caactcaaaagttaaaatcacgaaatcttacatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgtgacgtgcaactcgc 29808442  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  29808441 gaggcggg 29808434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 21939846 - 21939961
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||| || ||||||||||  ||||| ||||||||||||||| | |||||||||||    
T  21939846 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagcttgcgaggcgagttcaactgctcgctatggcgagctgcaatgtgcaactcgc 21939945  T
Q  101 gaggcggggaaaggtt 116  Q
    || ||| |||||||||    
T  21939946 gaagcgaggaaaggtt 21939961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 1561766 - 1561883
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  || ||||||||||| |||||||||||||||||||||||||||||   || |  | |||||||| |||||||||||||||||    
T  1561766 caactcaaaagtcaaaaatacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcaagtgttcaccatggcgagatgcgacgtgcaactcgc 1561865  T
Q  101 gaggcggggaaaggttac 118  Q
    |||||||||||| |||||    
T  1561866 gaggcggggaaaagttac 1561883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 16920302 - 16920197
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  || ||||||||||| |||||| ||| |||||||||||||||||| | || | |||||||||||||||||||||||||||||    
T  16920302 caactcaaaagtcaaaaatacgaaatcttgcatgctctctagtctagctcgctaggcgagttcatttgttcgctatggcgagctgcgacgtgcaactcgc 16920203  T
Q  101 gaggcg 106  Q
    ||||||    
T  16920202 gaggcg 16920197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 18409485 - 18409378
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||| || | |||||||||||||   |||||||||||    
T  18409485 caactcaaaggtcaaaatcacgaaatcctgcatgctctctggtcaagctcgctaggcgagttcatctactcgatatggcgagctgcagggtgcaactcgc 18409386  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  18409385 gaggcggg 18409378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 19303199 - 19303092
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||| | ||| |||||| |||||| ||||||||||||| | | |||||||||||    
T  19303199 caactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcacgaggtgagttcatctgctcgctatggcgagctccaaggtgcaactcgc 19303100  T
Q  101 gaggcggg 108  Q
     |||||||    
T  19303099 aaggcggg 19303092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 22439262 - 22439368
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||| |||||||||||||| ||||||||||| |||||||| |||||||||   || | ||| ||||||||||||||||| ||||||    
T  22439262 caactcaaaagtcaaaattacaaaatcttgcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgtaactcg 22439361  T
Q  100 cgaggcg 106  Q
    |||||||    
T  22439362 cgaggcg 22439368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 1645141 - 1645256
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||| | || |||    ||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||  |||||||||||||    
T  1645141 caactcaaaagtcaaaaactcagaattcgacatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgtaacgtgcaactcgc 1645240  T
Q  101 gaggcggggaaaggtt 116  Q
    |||||| |||||||||    
T  1645241 gaggcgaggaaaggtt 1645256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 18457177 - 18457285
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 98  Q
    |||||||||||| |||||||| |||| ||| ||  ||||||||||| |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||    
T  18457177 caactcaaaagttaaaatcacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgctcgctatggcgagctgcgtcgtgcaactc 18457275  T
Q  99 gcgaggcggg 108  Q
    ||||||||||    
T  18457276 gcgaggcggg 18457285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 25603043 - 25602932
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||| |||||||| ||||||||||| |||||||||||||||||||| || |||||   |||||  || ||||||||||| || |||||||||    
T  25603043 caactcaaaagttaaaatcacgaaatcttgcatgctctctggtcaagctcgctatggtgagttaagctgctctctgtggcgagctgcaacatgcaactcg 25602944  T
Q  100 cgaggcggggaa 111  Q
    ||||||| ||||    
T  25602943 cgaggcgaggaa 25602932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 25629013 - 25628906
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||| ||||||||||||||  |||||||||   |||| ||||||| ||||||||| |||||| |||||| ||||||||||||||| | || ||||||||    
T  25629013 caactaaaaagtcaaaatcatgaaatcttgcgagctctttggtcaaactcgctaggtgagttcatctgctcgctatggcgagctgcaaggtacaactcgc 25628914  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  25628913 gaggcggg 25628906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 19863440 - 19863546
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||  || ||||||| ||| ||||||||||| |||||||| |||||||||   || | ||| ||||||||||||||||||||||||    
T  19863440 caactcaaaagtcaaaactacgaaatcttacatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcg 19863539  T
Q  100 cgaggcg 106  Q
    |||||||    
T  19863540 cgaggcg 19863546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 22831954 - 22832060
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||  || ||||||||||| ||||||||||| |||| ||| || ||||||   || | ||||||||||||||||||||||||||||    
T  22831954 caactcaaaagtcaaaaatacgaaatcttgcatgctctctggtcatgctcactatggtgagttcagttgttcgctatggcgagctgcgacgtgcaactcg 22832053  T
Q  100 cgaggcg 106  Q
    |||||||    
T  22832054 cgaggcg 22832060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 15894088 - 15893981
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  || ||||||||||| |||||| |||||||| ||||||||||||   ||||| ||  ||||||| ||| ||||||| |||||    
T  15894088 caactcaaaagtcaaaagtacgaaatcttgcatgctctctagtcaagcttgctaggcgagttaggctgctcgcggtggcgagttgcaacgtgcagctcgc 15893989  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  15893988 gaggcggg 15893981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22334540 - 22334479
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagtt 62  Q
    |||||||||||||||| | || ||||||||||| ||||||||||||||||||||||||||||    
T  22334540 caactcaaaagtcaaatttacgaaatcttgcatgctctctggtcaagctcgctaggcgagtt 22334479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 22080361 - 22080287
Alignment:
Q  35 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    |||||||||||||||||||| || |||||| |||| ||||||||||||||||| | |||||||||| ||||||||    
T  22080361 ctctctggtcaagctcgctatggtgagttcatctgtttgctatggcgagctgcaaggtgcaactcgtgaggcggg 22080287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 25956279 - 25956172
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||| |||||||||||| || ||||| ||    |||||||||||  ||||||||||||||   |||||| ||||||||||||||| | ||||| |||||    
T  25956279 caacttaaaagtcaaaattacgaaatcatgacagctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcacctcgc 25956180  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  25956179 gaggcggg 25956172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 31155053 - 31154950
Alignment:
Q  4 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 102  Q
    ||||||||||||||  ||| |||||||||| |||||||||| ||||||||| |||||||   | |||| ||| |||||||||||  || |||||||||||    
T  31155053 ctcaaaagtcaaaaaaacagaatcttgcatgctctctggtctagctcgctatggcgagtatgtttgctcgctgtggcgagctgcatcgcgcaactcgcga 31154954  T
Q  103 ggcg 106  Q
    ||||    
T  31154953 ggcg 31154950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 22432712 - 22432818
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||  |||||||||||||| ||||||||||| |||||||| ||||| |||   || | | | |||| ||||||| ||||||||| |    
T  22432712 caactcaaaagtcaaaactacaaaatcttgcatgctctctggtcatgctcgctatggcgaattcagttggtcgttgtggcaagctgcggcgtgcaacttg 22432811  T
Q  100 cgaggcg 106  Q
    |||||||    
T  22432812 cgaggcg 22432818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20594236 - 20594289
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta 54  Q
    |||||||||||| |||||||| ||||||||||  ||||||||||||||||||||    
T  20594236 caactcaaaagtaaaaatcacgaaatcttgcaagctctctggtcaagctcgcta 20594289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 23019904 - 23019977
Alignment:
Q  35 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    ||||||||||   ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  23019904 ctctctggtcgcactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 23019977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 25641842 - 25641737
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    ||||||||||||| |||  |||||||||| ||| ||||||||||| ||||| || |||||||||   || | ||| |||||||||||||||| |||||||    
T  25641842 caactcaaaagtccaaactacaaaatcttacatgctctctggtcatgctcgttatggcgagttcagttgttcgctgtggcgagctgcgacgtccaactcg 25641743  T
Q  100 cgaggc 105  Q
     |||||    
T  25641742 tgaggc 25641737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 4185478 - 4185375
Alignment:
Q  4 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 102  Q
    |||||||||||||| |||| |||||||||| |||||||||| ||||||||| |||||||     |||| | | |||||||||||  || |||||||||||    
T  4185478 ctcaaaagtcaaaaacacagaatcttgcatgctctctggtctagctcgctatggcgagtaggattgctcgttgtggcgagctgcatcgcgcaactcgcga 4185379  T
Q  103 ggcg 106  Q
    ||||    
T  4185378 ggcg 4185375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 18180949 - 18181055
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    ||||||||||||||||||||| ||||    ||| ||||||||||| |||||||| |||||||     |||| ||||||||||||| |||| || ||||||    
T  18180949 caactcaaaagtcaaaatcacgaaattcaacatgctctctggtcatgctcgctatggcgagtaaggttgctcgctatggcgagctacgacatgtaactcg 18181048  T
Q  100 cgaggcg 106  Q
    |||||||    
T  18181049 cgaggcg 18181055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 31164516 - 31164410
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    ||||||||| ||||||||  ||||||||||||| ||||||| || ||||||||| |||||||    ||||| ||| |||||||||||   | ||||||||    
T  31164516 caactcaaatgtcaaaattgcaaaatcttgcatgctctctgctctagctcgctatggcgagtaggactgctcgctgtggcgagctgcattgcgcaactcg 31164417  T
Q  100 cgaggcg 106  Q
    |||||||    
T  31164416 cgaggcg 31164410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 4667868 - 4667769
Alignment:
Q  4 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 102  Q
    |||||||||||||| |||| |||||||||| |||||||||| | ||||||| |||||||     |||| ||| |||||||||||  || |||||||||||    
T  4667868 ctcaaaagtcaaaaacacagaatcttgcatgctctctggtctaactcgctatggcgagtaggattgctcgctgtggcgagctgcatcgcgcaactcgcga 4667769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 4674715 - 4674616
Alignment:
Q  4 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 102  Q
    |||||||||||||| |||| |||||||||| |||||||||| | ||||||| |||||||     |||| ||| |||||||||||  || |||||||||||    
T  4674715 ctcaaaagtcaaaaacacagaatcttgcatgctctctggtctaactcgctatggcgagtaggattgctcgctgtggcgagctgcatcgcgcaactcgcga 4674616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 19652658 - 19652764
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||| || |||||| |    ||||||||||| |||||||| ||||||||| | || | ||||||||||| ||| | ||| ||||||    
T  19652658 caactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctcgctatggcgagttcatttgttcgctatggcgagatgcaaggtgtaactcg 19652757  T
Q  100 cgaggcg 106  Q
    | |||||    
T  19652758 caaggcg 19652764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 15539816 - 15539849
Alignment:
Q  75 atggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    |||||||||||||| |||||||||||||||||||    
T  15539816 atggcgagctgcgaggtgcaactcgcgaggcggg 15539849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 18230771 - 18230812
Alignment:
Q  65 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  18230771 tctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 18230812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 18231153 - 18231194
Alignment:
Q  65 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  18231153 tctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 18231194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 20224546 - 20224587
Alignment:
Q  65 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  20224546 tctgctcgctatggcgagctgcaaagtgcaactcgcgaggcg 20224587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 22118530 - 22118571
Alignment:
Q  65 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  22118530 tctgctcgctatggcgagctgcaaagtgcaactcgcgaggcg 22118571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 108
Target Start/End: Original strand, 20594286 - 20594322
Alignment:
Q  72 gctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    ||||||||||||||| | |||||||||||||||||||    
T  20594286 gctatggcgagctgcaaggtgcaactcgcgaggcggg 20594322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 25611381 - 25611349
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcat 33  Q
    ||||||||||||||||||||| |||||||||||    
T  25611381 caactcaaaagtcaaaatcacgaaatcttgcat 25611349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 96; Significance: 3e-47; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 22636897 - 22637012
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  22636897 caactcagaagtcaaaatcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcaagctgcgacgtgcaactcgc 22636996  T
Q  101 gaggcggggaaaggtt 116  Q
    ||||||||||||||||    
T  22636997 gaggcggggaaaggtt 22637012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 44053292 - 44053407
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||    
T  44053292 caactcaaaagtcaaaatcatgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagttgcgacgtgcaactcgc 44053391  T
Q  101 gaggcggggaaaggtt 116  Q
    ||||||||||||||||    
T  44053392 gaggcggggaaaggtt 44053407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 12903208 - 12903325
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||    
T  12903208 caactcaaaagtcaaaattacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgatcgctatggcgagctgcgacgtgcaactcgc 12903307  T
Q  101 gaggcggggaaaggttac 118  Q
    |||||||||||| |||||    
T  12903308 gaggcggggaaaagttac 12903325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 16239650 - 16239533
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||| | |||||| ||||||||||||||| |||||||||||||    
T  16239650 caactcaaaagtcaaaattacgaaatcttgcatgctctctggtcaagctcgctaggcgagtacatctgctcgctatggcgagctgcaacgtgcaactcgc 16239551  T
Q  101 gaggcggggaaaggttac 118  Q
    ||||||||||||||||||    
T  16239550 gaggcggggaaaggttac 16239533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 20156947 - 20156841
Alignment:
Q  2 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 101  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||||||||||||||||||    
T  20156947 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcgacgtgcaactcgcg 20156848  T
Q  102 aggcggg 108  Q
    |||||||    
T  20156847 aggcggg 20156841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 7089329 - 7089446
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||| || ||||||||||| |||| |||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||    
T  7089329 caactcaaaagtcaaaattacgaaatcttgcatgctctttggtcaagctcgctaggcgagttcatctgctcgctatggcgagttgcgacgtgcaactcgc 7089428  T
Q  101 gaggcggggaaaggttac 118  Q
    || ||||||||| |||||    
T  7089429 gaagcggggaaaagttac 7089446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 3097096 - 3097200
Alignment:
Q  2 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 101  Q
    ||||||||||||||||| |  ||||||||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  3097096 aactcaaaagtcaaaattatgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcg 3097195  T
Q  102 aggcg 106  Q
    |||||    
T  3097196 aggcg 3097200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 24029204 - 24029319
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| ||||||| || ||||||| ||||||||||  ||||| ||||||||||||||| |||||||||||||    
T  24029204 caactcaaaagtcaaaatcacgaaatcttgcatgctctctgatcgagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgc 24029303  T
Q  101 gaggcggggaaaggtt 116  Q
    |||||| |||||||||    
T  24029304 gaggcgaggaaaggtt 24029319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 3332284 - 3332396
Alignment:
Q  4 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgag 103  Q
    |||||||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||  || || ||||||||||||||| ||||||||||||||||    
T  3332284 ctcaaaagtcaaaatcacgaaatcttgcatgctctctgatcaagctcgcgaggcgagttcaactactcgctatggcgagctgcaacgtgcaactcgcgag 3332383  T
Q  104 gcggggaaaggtt 116  Q
    ||| |||||||||    
T  3332384 gcgaggaaaggtt 3332396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 15091360 - 15091467
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| |||||| |||||||||||||||   ||||| |||||    
T  15091360 caactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcagggtgcacctcgc 15091459  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  15091460 gaggcggg 15091467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 15552276 - 15552382
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttc-ctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||  || ||||||||||| |||||||||||||||||||||||||||||  |||| | ||||||||||||||||||||||||||||    
T  15552276 caactcaaaagtcaaaaatacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcagtctgttcgctatggcgagctgcgacgtgcaactcg 15552375  T
Q  100 cgaggcg 106  Q
    |||||||    
T  15552376 cgaggcg 15552382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 22633871 - 22633756
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||||||||  |||||  ||||||| |||||| |||||||||||||    
T  22633871 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaggctcgcgaggcgagttcaactgctcactatggcaagctgcaacgtgcaactcgc 22633772  T
Q  101 gaggcggggaaaggtt 116  Q
    |||||| | |||||||    
T  22633771 gaggcgagaaaaggtt 22633756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 17053494 - 17053599
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  || ||||||||||| |||||| ||| |||||||||||||||||| |||| | ||||||||||||||| |||||||||||||    
T  17053494 caactcaaaagtcaaaaatacgaaatcttgcatgctctctagtctagctcgctaggcgagttcatctgttcgctatggcgagctgcaacgtgcaactcgc 17053593  T
Q  101 gaggcg 106  Q
    ||||||    
T  17053594 gaggcg 17053599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 16377180 - 16377073
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||  ||||||||||  || ||||||||||||||||||| |||||| |||||| ||||||||||||||| | || ||||||||    
T  16377180 caactcaaaagtcaaaatcatgaaatcttgcaagctatctggtcaagctcgctaggtgagttcatctgctcgctatggcgagctgcaaggtacaactcgc 16377081  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  16377080 gaggcggg 16377073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 44928581 - 44928474
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||||||  |||||||||  |||||| |||||||||||||||||||||| |||| |  |||||||||||||| |||||||||||||    
T  44928581 caactcaaaagtcaaaatcacggaatcttgcaagctctctagtcaagctcgctaggcgagttcatctgttcactatggcgagctgcaacgtgcaactcgc 44928482  T
Q  101 gaggcggg 108  Q
     |||||||    
T  44928481 aaggcggg 44928474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 14052971 - 14052869
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  || || |||||||| |||||||||| |||||||||||||||||| |||| | |||||||||||||||||| ||||||||||    
T  14052971 caactcaaaagtcaaaaatacgaa-tcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacatgcaactcgc 14052873  T
Q  101 gagg 104  Q
    ||||    
T  14052872 gagg 14052869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 44102672 - 44102780
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 98  Q
    ||||||||||||||||||||| |||| ||| ||  ||||||||||| |||||||| ||||||||| |||||| |||| ||||||||||||||||||||||    
T  44102672 caactcaaaagtcaaaatcacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgctcgctacggcgagctgcgacgtgcaactc 44102770  T
Q  99 gcgaggcggg 108  Q
    ||||||||||    
T  44102771 gcgaggcggg 44102780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 12774461 - 12774569
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 98  Q
    |||||||||||||||||| || |||||| | ||  ||||||||||| |||||| | ||||||||| |||| |||||||||||||||||||||||||||||    
T  12774461 caactcaaaagtcaaaattacgaaatct-gaatagctctctggtcatgctcgcgatggcgagttcatctgtttgctatggcgagctgcgacgtgcaactc 12774559  T
Q  99 gcgaggcggg 108  Q
    ||||||||||    
T  12774560 gcgaggcggg 12774569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 14039112 - 14039197
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 86  Q
    ||||||||||||||||||||  ||||||||||  |||||| |||||||||||||||||||||| |||||| |||||| ||||||||    
T  14039112 caactcaaaagtcaaaatcatgaaatcttgcaagctctctagtcaagctcgctaggcgagttcatctgctcgctatgccgagctgc 14039197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 16597112 - 16597225
Alignment:
Q  5 tcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 104  Q
    |||||| ||||||| ||| |||||||||| |||||||||| ||||||||||||||||||   || | |   ||||||||||| |||||||||||||||||    
T  16597112 tcaaaaatcaaaattacagaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgtcgtggcgagctgcaacgtgcaactcgcgagg 16597211  T
Q  105 cggggaaaggttac 118  Q
    |||| || ||||||    
T  16597212 cgggaaagggttac 16597225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 21815290 - 21815182
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 98  Q
    ||||||||||||||||||||| |||| ||| ||  ||||||||||| |||||| | ||||||||| |||||| ||||||||||||| |||||||||||||    
T  21815290 caactcaaaagtcaaaatcacgaaat-ttggatagctctctggtcatgctcgcgatggcgagttcatctgctcgctatggcgagctacgacgtgcaactc 21815192  T
Q  99 gcgaggcggg 108  Q
    | ||||||||    
T  21815191 gtgaggcggg 21815182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 6190896 - 6191004
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 98  Q
    ||||||||||||||||||||  |||| ||| ||  ||||||||||| |||||||| || |||||| || ||| |||||| ||||||||||||||||||||    
T  6190896 caactcaaaagtcaaaatcatgaaat-ttggatagctctctggtcatgctcgctatggtgagttcatcagctcgctatgacgagctgcgacgtgcaactc 6190994  T
Q  99 gcgaggcggg 108  Q
    ||||||||||    
T  6190995 gcgaggcggg 6191004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 21818383 - 21818275
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 98  Q
    ||||||||||||||||||||| |||| ||| ||  ||||||||||| | |||| | ||||||||| |||||| ||||||||||||| |||||||||||||    
T  21818383 caactcaaaagtcaaaatcacgaaat-ttggatagctctctggtcatgatcgcgatggcgagttcatctgctcgctatggcgagctacgacgtgcaactc 21818285  T
Q  99 gcgaggcggg 108  Q
    | ||||||||    
T  21818284 gtgaggcggg 21818275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 13812467 - 13812408
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgag 60  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||  |||||||    
T  13812467 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgtgaggcgag 13812408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 39705946 - 39705839
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||| ||| |||||||| || ||||| ||   ||||||||||||  ||||||||||||||   |||||| ||||||||||||||| | |||||||||||    
T  39705946 caacttaaaggtcaaaattacgaaatcatgatgcctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgc 39705847  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  39705846 gaggcggg 39705839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7799160 - 7799222
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagtt 62  Q
    ||||||| ||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||    
T  7799160 caactcagaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctatggcgagtt 7799222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 43198212 - 43198139
Alignment:
Q  35 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    |||||||||||  ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  43198212 ctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 43198139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 7799210 - 7799254
Alignment:
Q  72 gctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 116  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  7799210 gctatggcgagttgcgacgtgcaactcgcgaggcggggaaaggtt 7799254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 118
Target Start/End: Complemental strand, 23374117 - 23374074
Alignment:
Q  75 atggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 118  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  23374117 atggcgagctgcaacgtgcaactcgcgaggcggggaaaggttac 23374074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 13569972 - 13570078
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||  ||| |||  | ||| ||||||||||| |||||||| |||||||     || | ||| ||||||||||||||||||||||||    
T  13569972 caactcaaaagtcaaaaatacagaattctacatgctctctggtcatgctcgctatggcgagtaaagttgttcgctgtggcgagctgcgacgtgcaactcg 13570071  T
Q  100 cgaggcg 106  Q
    |||||||    
T  13570072 cgaggcg 13570078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 23843939 - 23844045
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||  ||| |||  | ||| ||||||||||| |||||||| |||||||  |  || | | | ||||||||||||||||||||||||    
T  23843939 caactcaaaagtcaaaagtacagaattctacatgctctctggtcatgctcgctatggcgagtaacattgttcgatgtggcgagctgcgacgtgcaactcg 23844038  T
Q  100 cgaggcg 106  Q
    |||||||    
T  23844039 cgaggcg 23844045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 44676092 - 44676198
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||  | | |||  | ||| ||||||||||| |||||||| |||||||  |  || | ||| ||||||||||||||||||||||||    
T  44676092 caactcaaaagtcaaaaatatagaattctacatgctctctggtcatgctcgctatggcgagtaacattgttcgctgtggcgagctgcgacgtgcaactcg 44676191  T
Q  100 cgaggcg 106  Q
    |||||||    
T  44676192 cgaggcg 44676198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 46640018 - 46639925
Alignment:
Q  13 caaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    ||||||||||||||| ||  ||||| |||||||||||||| | ||||| ||  |||||| ||||||||||||||| | ||||||||| |||||||    
T  46640018 caaaatcacaaaatcatgtttcctcactggtcaagctcgcgatggcga-ttgatctgctcgctatggcgagctgcaaggtgcaactcacgaggcg 46639925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 106
Target Start/End: Original strand, 10314244 - 10314283
Alignment:
Q  67 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  10314244 tgctcgctatggcgagctgcgaagtgcaactcgcgaggcg 10314283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 13845002 - 13845109
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||| |||||||||||| || ||||| ||    |||| ||||||  ||||||||||||||   |||||| | ||||||||||||| | |||||| ||||    
T  13845002 caacttaaaagtcaaaattacgaaatcatgacagctctttggtcacactcgctaggcgagtgaatctgctcgttatggcgagctgcaaggtgcaattcgc 13845101  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  13845102 gaggcggg 13845109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 15121462 - 15121356
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||  ||| |||    ||| ||||||||||| |||||||| |||||||     || ||||| |||||||||||||| |||||||||    
T  15121462 caactcaaaagtcaaaaatacataattcaacatgctctctggtcatgctcgctatggcgagtaaggttgtttgctgtggcgagctgcgacttgcaactcg 15121363  T
Q  100 cgaggcg 106  Q
    |||||||    
T  15121362 cgaggcg 15121356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 106
Target Start/End: Original strand, 8846889 - 8846922
Alignment:
Q  73 ctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    |||||||||||||||| |||||||||||||||||    
T  8846889 ctatggcgagctgcgaggtgcaactcgcgaggcg 8846922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 53081693 - 53081652
Alignment:
Q  65 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    |||||| ||||||||||||||| || ||||||||||||||||    
T  53081693 tctgctcgctatggcgagctgcaacatgcaactcgcgaggcg 53081652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 12287726 - 12287686
Alignment:
Q  66 ctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    ||||| ||||||||||||||| | |||||||||||||||||    
T  12287726 ctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 12287686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 13663 - 13780
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  13663 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcactatggcgagctgcgacgtgcaactcgc 13762  T
Q  101 gaggcggggaaaggttac 118  Q
    || |||||||||||||||    
T  13763 gatgcggggaaaggttac 13780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 20866 - 20981
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  20866 caactcaaaagtcaaaatcacgaaatcttacatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgc 20965  T
Q  101 gaggcggggaaaggtt 116  Q
    || |||||||||||||    
T  20966 gaagcggggaaaggtt 20981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 40374 - 40481
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  40374 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgc 40473  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  40474 gaggcggg 40481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 2314 - 2429
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| |||||||| || |||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  2314 caactcaaaagtcaaaatcacgaaatcttggatgctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgc 2413  T
Q  101 gaggcggggaaaggtt 116  Q
    ||||||||||||||||    
T  2414 gaggcggggaaaggtt 2429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 92; Significance: 9e-45; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 339609 - 339498
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  339609 caactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgc 339510  T
Q  101 gaggcggggaaa 112  Q
    ||||||||||||    
T  339509 gaggcggggaaa 339498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 71749 - 71864
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| |||||||||||||    
T  71749 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgc 71848  T
Q  101 gaggcggggaaaggtt 116  Q
    |||||| |||||||||    
T  71849 gaggcgaggaaaggtt 71864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 9e-45; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 23390154 - 23390039
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| |||||||| || |||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  23390154 caactcaaaagtcaaaatcacgaaatcttggatgctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgc 23390055  T
Q  101 gaggcggggaaaggtt 116  Q
    ||||||||||||||||    
T  23390054 gaggcggggaaaggtt 23390039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 25421995 - 25422110
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| | ||| || ||||||||||||||||| |||||||||||    
T  25421995 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagtacatctactcgctatggcgagctgcgatgtgcaactcgc 25422094  T
Q  101 gaggcggggaaaggtt 116  Q
    ||||||||||||||||    
T  25422095 gaggcggggaaaggtt 25422110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 1096930 - 1097037
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||  |||||| ||||||||||||||| | |||||||||||    
T  1096930 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagtttatctgctcgctatggcgagctgcaaggtgcaactcgc 1097029  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  1097030 gaggcggg 1097037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 20910470 - 20910363
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| |||||||||||||    
T  20910470 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgc 20910371  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  20910370 gaggcggg 20910363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 22119851 - 22119736
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||| || ||||||||||  ||||| ||||||||||||||| |||||||||||||    
T  22119851 caactcaaaagtcaaaatcacaaaattttgcatgctctctggtcaagcttgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgc 22119752  T
Q  101 gaggcggggaaaggtt 116  Q
    |||||| |||||||||    
T  22119751 gaggcgaggaaaggtt 22119736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 24494031 - 24494138
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||  ||||| ||||||||||||||| | |||||||||||    
T  24494031 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcagctgctcgctatggcgagctgcaaggtgcaactcgc 24494130  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  24494131 gaggcggg 24494138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 21985805 - 21985700
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||| |    
T  21985805 caactcaaaagtcaaaatcacgaaatcttgcatgctctctgttcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcagctctc 21985706  T
Q  101 gaggcg 106  Q
    ||||||    
T  21985705 gaggcg 21985700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 25431857 - 25431972
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||| | ||| || ||||||| |||||||||||||||||||||    
T  25431857 caactcaaaagtcaaaatcacgaaatcttgcacgctctctggtcaagctcgctaggcgagtacatctactcgctatggagagctgcgacgtgcaactcgc 25431956  T
Q  101 gaggcggggaaaggtt 116  Q
    ||||| || |||||||    
T  25431957 gaggcaggaaaaggtt 25431972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 22075471 - 22075588
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||   || | || |||||||||||| |||||||||||||    
T  22075471 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcactaggcgagttcaagtgttcgccatggcgagctgcaacgtgcaactcgc 22075570  T
Q  101 gaggcggggaaaggttac 118  Q
     |||||||||||||||||    
T  22075571 aaggcggggaaaggttac 22075588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 9078415 - 9078518
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| | ||||||||||| | | |||||||||||    
T  9078415 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgttatggcgagctacaaggtgcaactcgc 9078514  T
Q  101 gagg 104  Q
    ||||    
T  9078515 gagg 9078518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 21871229 - 21871114
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| |||||| ||||||||||| ||||||||||  ||||| ||||||||||||||| ||||||| |||||    
T  21871229 caactcaaaagtcaaaatcacgaaatcttgcatgctctctagtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcacctcgc 21871130  T
Q  101 gaggcggggaaaggtt 116  Q
    |||||| || ||||||    
T  21871129 gaggcgaggtaaggtt 21871114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 21875509 - 21875394
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| |||||| ||||||||||| ||||||||||  ||||| ||||||||||||||| ||||||| |||||    
T  21875509 caactcaaaagtcaaaatcacgaaatcttgcatgctctcttgtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcacctcgc 21875410  T
Q  101 gaggcggggaaaggtt 116  Q
    |||||| || ||||||    
T  21875409 gaggcgaggtaaggtt 21875394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 19660495 - 19660380
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  |||||||||||||| |||||||||| ||||||||||||||||||   || | || |||||||||||||||||||||||||     
T  19660495 caactcaaaagtcaaaaatacaaaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgccatggcgagctgcgacgtgcaactcgt 19660396  T
Q  101 gaggcggggaaaggtt 116  Q
    ||||||||||| ||||    
T  19660395 gaggcggggaagggtt 19660380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 24529684 - 24529787
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| | |||||| | |||||||||||||   |||||||||||    
T  24529684 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagtacatctgctcgttatggcgagctgcagggtgcaactcgc 24529783  T
Q  101 gagg 104  Q
    ||||    
T  24529784 gagg 24529787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 11580903 - 11580795
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 98  Q
    ||||||||||||||||||||| |||| ||| ||  ||||||||||| |||||||| ||||||||| |||||| |||||||| ||||||||||||||||||    
T  11580903 caactcaaaagtcaaaatcacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgctcgctatggcaagctgcgacgtgcaactc 11580805  T
Q  99 gcgaggcggg 108  Q
    ||||||||||    
T  11580804 gcgaggcggg 11580795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 22107042 - 22106937
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  || |||| |||||| |||||||||| |||||||||||||||||| |||| | | | ||||||||||||||||||| |||||    
T  22107042 caactcaaaagtcaaaaatacgaaattttgcatgctctctggtctagctcgctaggcgagttcatctgttcgttgtggcgagctgcgacgtgcacctcgc 22106943  T
Q  101 gaggcg 106  Q
    ||||||    
T  22106942 gaggcg 22106937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 29916591 - 29916699
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 98  Q
    ||||||||||||||||||||| |||| ||| ||  |||| |||||| |||||||| ||||||||| | |||| |||||||||||||||||||||||||||    
T  29916591 caactcaaaagtcaaaatcacgaaat-ttggatagctctatggtcatgctcgctatggcgagttcatttgctcgctatggcgagctgcgacgtgcaactc 29916689  T
Q  99 gcgaggcggg 108  Q
    ||||||||||    
T  29916690 gcgaggcggg 29916699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 8286511 - 8286452
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgag 60  Q
    ||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||    
T  8286511 caactcaaaagtcaaaaacacgaaatcttgcatgctctctggtcaagctcgctaggcgag 8286452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 24766995 - 24766885
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||| ||||||  ||||||||||| || |||||||| ||||||     ||||||  ||||| |||||||||| |||| ||||||| |||||    
T  24766995 caactcaaaagtcgaaatcatgaaatcttgcatgctatctggtcaggctcgc-----gagttcaactgctcgctatggcgaactgcaacgtgcacctcgc 24766901  T
Q  101 gaggcggggaaaggtt 116  Q
    |||||| |||||||||    
T  24766900 gaggcgaggaaaggtt 24766885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 23201829 - 23201935
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||  ||| |||  | ||| ||||||||||| |||||||| |||||||||   || | ||| ||||||||||||||||||||||||    
T  23201829 caactcaaaagtcaaaagtacagaattctacatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcg 23201928  T
Q  100 cgaggcg 106  Q
    |||||||    
T  23201929 cgaggcg 23201935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 37724364 - 37724470
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||| ||| |||||| ||| |||||| |||| |||||||| |||||||||   || | | | |||||||||| |||||||||||||    
T  37724364 caactcaaaagtcaaaattacagaatcttacatgctctctagtcatgctcgctatggcgagttcagttgttcgatgtggcgagctgtgacgtgcaactcg 37724463  T
Q  100 cgaggcg 106  Q
    |||||||    
T  37724464 cgaggcg 37724470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 21498641 - 21498560
Alignment:
Q  35 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 116  Q
    |||||| ||||  |||||||||||||||  |||||| ||||||||||||||| | |||||||||||||||| || |||||||    
T  21498641 ctctctagtcacactcgctaggcgagttaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcaggtaaaggtt 21498560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 31342563 - 31342669
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    ||||||||||||||||| |||| ||| |  ||| |||||| |||| |||||||| ||||||||   || || ||| ||||||||||| ||||||||||||    
T  31342563 caactcaaaagtcaaaaacacagaatttgacatgctctctagtcatgctcgctatggcgagttaagctactcgctgtggcgagctgcaacgtgcaactcg 31342662  T
Q  100 cgaggcg 106  Q
    |||||||    
T  31342663 cgaggcg 31342669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 13095957 - 13096014
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcg 58  Q
    ||||||||||||||||||||| ||||||||||| |||||| ||||| ||||| |||||    
T  13095957 caactcaaaagtcaaaatcacgaaatcttgcatgctctctagtcaatctcgcaaggcg 13096014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 21329119 - 21329046
Alignment:
Q  35 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    |||| ||||||  ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  21329119 ctctatggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 21329046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 112
Target Start/End: Complemental strand, 8286457 - 8286422
Alignment:
Q  77 ggcgagctgcgacgtgcaactcgcgaggcggggaaa 112  Q
    ||||||||||||||||||||||||||||||||||||    
T  8286457 ggcgagctgcgacgtgcaactcgcgaggcggggaaa 8286422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 22959191 - 22959085
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgctagg-cgagttcctctgcttgctatggcgagctgcgacgtgcaactc 98  Q
    |||||||||||||||||| || |||| ||| ||  ||||||||||| |||||||| | |||||||  ||| | ||||||||||||||| | |||||||||    
T  22959191 caactcaaaagtcaaaattacgaaat-ttggatagctctctggtcatgctcgctatgacgagttcaactgttcgctatggcgagctgcaatgtgcaactc 22959093  T
Q  99 gcgaggcg 106  Q
    ||||||||    
T  22959092 gcgaggcg 22959085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 117
Target Start/End: Original strand, 22144578 - 22144628
Alignment:
Q  67 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtta 117  Q
    |||||||||||||||||||| | ||||||||||||||||||| ||| ||||    
T  22144578 tgcttgctatggcgagctgcaaggtgcaactcgcgaggcgggtaaaagtta 22144628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 13025773 - 13025830
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcg 58  Q
    |||||||||| |||||||||| ||||||||||| |||||| ||||| ||||| |||||    
T  13025773 caactcaaaattcaaaatcacgaaatcttgcatgctctctagtcaatctcgcaaggcg 13025830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 14079609 - 14079714
Alignment:
Q  2 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||  ||| |||  | ||| ||||||||||| |||||||| |||||||  |  || | | | |||||||||||||||||||||||||    
T  14079609 aactcaaaagtcaaaaatacagaattctacatgctctctggtcatgctcgctacggcgagtaacattgttcgttgtggcgagctgcgacgtgcaactcgc 14079708  T
Q  101 gaggcg 106  Q
    ||||||    
T  14079709 gaggcg 14079714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 26011658 - 26011585
Alignment:
Q  35 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    |||||||||||  ||||||||||||||   |||||| | ||||||||||||| | |||||||||| ||||||||    
T  26011658 ctctctggtcacactcgctaggcgagtgaatctgctcgatatggcgagctgcaaggtgcaactcgtgaggcggg 26011585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 36154441 - 36154400
Alignment:
Q  67 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    |||| |||||||||||||||||| ||||||||||||||||||    
T  36154441 tgctcgctatggcgagctgcgacatgcaactcgcgaggcggg 36154400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 19669363 - 19669451
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcga 88  Q
    |||||||||||||||||| || |||||| |    ||||||||||| |||||| | ||||||||| |||||| |||| ||||||||||||    
T  19669363 caactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctcgcaatggcgagttcatctgctcgctagggcgagctgcga 19669451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26742416 - 26742363
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta 54  Q
    ||||||||||||||||| | || ||| || ||| ||||||||||||||||||||    
T  26742416 caactcaaaagtcaaaaactcagaattttacatgctctctggtcaagctcgcta 26742363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 21741164 - 21741116
Alignment:
Q  38 tctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 86  Q
    ||||||||  |||||||||||||||  |||||| |||||||||||||||    
T  21741164 tctggtcacactcgctaggcgagttaatctgctcgctatggcgagctgc 21741116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 106
Target Start/End: Complemental strand, 22177787 - 22177696
Alignment:
Q  15 aaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    ||||||||||||| ||  ||||| || ||||| ||||||| |||||||   |||||| ||||||||||||||| || |||||||| |||||||    
T  22177787 aaatcacaaaatcatgtttcctcactagtcaaactcgctatggcgagtga-tctgctcgctatggcgagctgcaacatgcaactcacgaggcg 22177696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 9e-45; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 13442717 - 13442832
Alignment:
Q  3 actcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 102  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||| |    
T  13442717 actcaaaagtgaaaatcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagttgcgacgtgcaactcgcaa 13442816  T
Q  103 ggcggggaaaggttac 118  Q
    ||||||||||||||||    
T  13442817 ggcggggaaaggttac 13442832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 20698105 - 20697993
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||    
T  20698105 caactcaaaagtcaaaattacaaaatcttgcatgctctctggtcaagctcgctagacgagttcatctgctcgctatggcgagctgcgacgtgcaactcgc 20698006  T
Q  101 gaggcggggaaag 113  Q
    |||||||| ||||    
T  20698005 gaggcgggaaaag 20697993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 26687350 - 26687457
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  26687350 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcactatggcgagctgcgacgtgcaactcgc 26687449  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  26687450 gaggcggg 26687457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 17499805 - 17499917
Alignment:
Q  4 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgag 103  Q
    |||||||||||||||||  ||||||||||| |||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||    
T  17499805 ctcaaaagtcaaaatcatgaaatcttgcattctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgtgag 17499904  T
Q  104 gcggggaaaggtt 116  Q
    |||||||||||||    
T  17499905 gcggggaaaggtt 17499917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 11424421 - 11424306
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||   |||||||||||    
T  11424421 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcagggtgcaactcgc 11424322  T
Q  101 gaggcggggaaaggtt 116  Q
    ||||||| ||||||||    
T  11424321 gaggcggagaaaggtt 11424306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 17247944 - 17247837
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||| |||| | |||||||||||||||||||||||||||||    
T  17247944 caactcaaaagtcaaaatcacgaaatcttgcaacctctctggtcaagctcgctaggagagttcatctgttcgctatggcgagctgcgacgtgcaactcgc 17247845  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  17247844 gaggcggg 17247837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 17488323 - 17488435
Alignment:
Q  4 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgag 103  Q
    ||||||||||||| |||| ||||||||||| |||||| |||||||| ||||||||||||| ||| || ||||||||||||||||||||||||||||||||    
T  17488323 ctcaaaagtcaaattcacgaaatcttgcatgctctctagtcaagcttgctaggcgagttcatcttctcgctatggcgagctgcgacgtgcaactcgcgag 17488422  T
Q  104 gcggggaaaggtt 116  Q
    |||||||||||||    
T  17488423 gcggggaaaggtt 17488435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 14666068 - 14666175
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||  ||||| |||||||||||||| ||||||||||||||    
T  14666068 caactcaaaagtcaaaatcataaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgtgacgtgcaactcgc 14666167  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  14666168 gaggcggg 14666175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 14735581 - 14735688
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||  ||||| |||||||||||||| ||||||||||||||    
T  14735581 caactcaaaagtcaaaatcataaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgtgacgtgcaactcgc 14735680  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  14735681 gaggcggg 14735688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 25476043 - 25475936
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| | ||||||||||||| | || ||||||||    
T  25476043 caactcaaaagtcaaaatcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgttatggcgagctgcaaggtacaactcgc 25475944  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  25475943 gaggcggg 25475936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 184418 - 184318
Alignment:
Q  16 aatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggt 115  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  184418 aatcacgaaatcttgcatgttctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgtgaggcggggaaaggt 184319  T
Q  116 t 116  Q
    |    
T  184318 t 184318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 53070357 - 53070249
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    ||||||||||||||||||||| ||||||||||  ||| |||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  53070357 caactcaaaagtcaaaatcacgaaatcttgcaagctccctggtcaagctcgctatggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcg 53070258  T
Q  100 cgaggcggg 108  Q
    |||||||||    
T  53070257 cgaggcggg 53070249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 18438997 - 18439104
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| || |||||||||||||||   |||||||||||    
T  18438997 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctactcgctatggcgagctgctgggtgcaactcgc 18439096  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  18439097 gaggcggg 18439104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 23083019 - 23082912
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||||||||||  ||| ||||||||||||||||||| ||||||||| ||| || |||||||||||||||||||||||||||||    
T  23083019 caactcaaaagtcaaaatcacaaaatctgacatgctctctggtcaagctcgctgggcgagttcatctactcgctatggcgagctgcgacgtgcaactcgc 23082920  T
Q  101 gaggcggg 108  Q
     |||||||    
T  23082919 aaggcggg 23082912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 43842641 - 43842756
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||| ||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||  ||||| ||||||||||| | ||||||||||| |||    
T  43842641 caactaaaaagtcaaaatcatgaaatcttgcatgctctctggtcaagctcgctaggcgagttcagctgctcgctatggcgagttacgacgtgcaacccgc 43842740  T
Q  101 gaggcggggaaaggtt 116  Q
    ||||||||||||||||    
T  43842741 gaggcggggaaaggtt 43842756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 12852021 - 12851908
Alignment:
Q  2 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 101  Q
    |||||||||||||||||||| ||||||||||| ||||| ||||||| |||| ||||||||||  ||||| ||||||||||||||| ||||||||||||||    
T  12852021 aactcaaaagtcaaaatcacgaaatcttgcatgctctcaggtcaagatcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcg 12851922  T
Q  102 aggcggggaaaggt 115  Q
    ||||| ||||||||    
T  12851921 aggcgaggaaaggt 12851908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 13209986 - 13209869
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  || ||||||||||| |||||||||||||||||||||||||||||   || | || ||||||||||||||||||||||||||    
T  13209986 caactcaaaagtcaaaaatacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcaagtgttcgccatggcgagctgcgacgtgcaactcgc 13209887  T
Q  101 gaggcggggaaaggttac 118  Q
    |||||||||||| |||||    
T  13209886 gaggcggggaaaagttac 13209869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 14179785 - 14179890
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | |||||||||||||||||||||||||||||    
T  14179785 caactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgc 14179884  T
Q  101 gaggcg 106  Q
    ||||||    
T  14179885 gaggcg 14179890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 14973317 - 14973424
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||||||||| |||||| |||||| |||||||||||||||   |||||||||||    
T  14973317 caactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggtgagttcatctgctcgctatggcgagctgcagggtgcaactcgc 14973416  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  14973417 gaggcggg 14973424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 40213379 - 40213275
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||| |||||||||||| |||||| ||||||||||||| | | ||| |||||||    
T  40213379 caactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcactaggcgagttcatctgctcgctatggcgagctacaaggtgtaactcgc 40213280  T
Q  101 gaggc 105  Q
    |||||    
T  40213279 gaggc 40213275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 30030291 - 30030406
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||| | || ||||||||||| |||||||||||||||||||||||||||||  || || ||||||||||| ||| ||| |||||| ||    
T  30030291 caactcaaaagtcaaatttacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcagctactcgctatggcgagttgcaacgcgcaacttgc 30030390  T
Q  101 gaggcggggaaaggtt 116  Q
    |||||||| |||||||    
T  30030391 gaggcgggaaaaggtt 30030406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 16809848 - 16809953
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  || |||||| |||| |||||| ||| |||||||||||||||||| |||  | |||||||||||||||||||||||||||||    
T  16809848 caactcaaaagtcaaaaatacgaaatctagcatgctctctagtctagctcgctaggcgagttcatctattcgctatggcgagctgcgacgtgcaactcgc 16809947  T
Q  101 gaggcg 106  Q
    ||||||    
T  16809948 gaggcg 16809953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 12399658 - 12399772
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||| ||||||||| |||| |||||||||| ||||||| ||||||||||   || || | ||||||||||||||||||||||||||    
T  12399658 caactcaaaagtcaaaattacaaaatctagcatgctctctggtctagctcgcgaggcgagttcaagtgttttccatggcgagctgcgacgtgcaactcgc 12399757  T
Q  101 gaggcggggaaaggtt 116  Q
    || |||||||| ||||    
T  12399758 ga-gcggggaagggtt 12399772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 14576491 - 14576386
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     |||| ||| |||||||||||  |||||||||||     
T  14576491 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagtaggattgctcgctgtggcgagctgcatcgtgcaactcgg 14576392  T
Q  101 gaggcg 106  Q
    ||||||    
T  14576391 gaggcg 14576386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 14669223 - 14669304
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgag 82  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| |||||||||||    
T  14669223 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgag 14669304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 14573051 - 14573156
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||     |||||| | |||||||||||  ||||||||| ||    
T  14573051 caactcaaaagtcaaaaacacaaaatcttgcatgctctttggtcaagctcgctaggcgagtaggattgcttgttgtggcgagctgcatcgtgcaacttgc 14573150  T
Q  101 gaggcg 106  Q
    ||||||    
T  14573151 gaggcg 14573156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 12933968 - 12933856
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||  || |||||| |    ||||||||||| |||||||| ||||||||| |||| | ||||||||||||||||||||||||||||    
T  12933968 caactcaaaagtcaaaagtacgaaatctggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcg 12933869  T
Q  100 cgaggcggggaaa 112  Q
    ||||||| |||||    
T  12933868 cgaggcgaggaaa 12933856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 23408891 - 23409003
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||| || || |||||||| |||| |||||| |||||||| |||||||||   || | ||| ||||||||||||||||||||||||    
T  23408891 caactcaaaagtcaaaattacgaattcttgcatgctctttggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcg 23408990  T
Q  100 cgaggcggggaaa 112  Q
    ||||||| |||||    
T  23408991 cgaggcgaggaaa 23409003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 12340215 - 12340321
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||     |||| ||| ||||||||| |||| || ||||||    
T  12340215 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctatggcgagtagggttgctcgctgtggcgagctacgacatgtaactcg 12340314  T
Q  100 cgaggcg 106  Q
    |||||||    
T  12340315 cgaggcg 12340321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 15877487 - 15877381
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||  || ||||||||||| ||||||||||| |||||||| |||||||||   || | ||| ||||||| ||||||||||||||||    
T  15877487 caactcaaaagtcaaaactacgaaatcttgcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagttgcgacgtgcaactcg 15877388  T
Q  100 cgaggcg 106  Q
    |||||||    
T  15877387 cgaggcg 15877381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 106
Target Start/End: Original strand, 9513407 - 9513479
Alignment:
Q  35 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    ||||||||||| |||||||| ||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  9513407 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 9513479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 106
Target Start/End: Original strand, 9521382 - 9521454
Alignment:
Q  35 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    ||||||||||| |||||||| ||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  9521382 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 9521454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 17247148 - 17247084
Alignment:
Q  44 caagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    |||||||||||||||||||| |||| | ||||||||||| |||||||||||||||||||||||||    
T  17247148 caagctcgctaggcgagttcatctgttcgctatggcgagttgcgacgtgcaactcgcgaggcggg 17247084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 1644341 - 1644235
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 98  Q
    |||||||||||||||||| || |||||| | ||  ||||||||||| |||||||| |||||||||  ||| | |||||||||||||||||||||||||||    
T  1644341 caactcaaaagtcaaaattacgaaatct-gaatagctctctggtcatgctcgctatggcgagttcaactgttcgctatggcgagctgcgacgtgcaactc 1644243  T
Q  99 gcgaggcg 106  Q
    ||||||||    
T  1644242 gcgaggcg 1644235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 4588439 - 4588368
Alignment:
Q  35 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    |||||||||||||||||| ||||||||||  ||||| |||||||||||||||  ||||||||||||||||||    
T  4588439 ctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcatcgtgcaactcgcgaggcg 4588368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 106
Target Start/End: Original strand, 42386908 - 42386979
Alignment:
Q  35 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    |||||||||||  |||||||||||||||| |||||| ||||||||||||||| | |||||||||||||||||    
T  42386908 ctctctggtcacactcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 42386979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 16104243 - 16104351
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 98  Q
    |||||||||||||||||| || |||| ||| ||  ||||||||||| |||||||| ||||||||| |||| | || ||||||||| ||||||||||||||    
T  16104243 caactcaaaagtcaaaattacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgttcgcgatggcgagcggcgacgtgcaactc 16104341  T
Q  99 gcgaggcggg 108  Q
    ||||||||||    
T  16104342 gcgaggcggg 16104351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 15471387 - 15471497
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||| |||||||| || ||||| ||   | ||||||||||  ||||||||||||||   |||||| ||||||||||||||| | ||| |||||||    
T  15471387 caactcaaaggtcaaaattacgaaatcatgatgcttctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtggaactcgc 15471486  T
Q  101 gaggcggggaa 111  Q
    |||||||||||    
T  15471487 gaggcggggaa 15471497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 49389302 - 49389197
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 98  Q
    |||||||||||||||||| || |||||| | ||  ||||||||||| |||||||| |||||||||  ||| | ||||||||||||||||| |||||||||    
T  49389302 caactcaaaagtcaaaattacgaaatct-gaatagctctctggtcatgctcgctatggcgagttcaactgttcgctatggcgagctgcgatgtgcaactc 49389204  T
Q  99 gcgaggc 105  Q
    |||||||    
T  49389203 gcgaggc 49389197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 14234988 - 14235064
Alignment:
Q  36 tctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 112  Q
    ||||||||||  ||| ||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||||||    
T  14234988 tctctggtcacactcactaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggggaaa 14235064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 14669367 - 14669427
Alignment:
Q  48 ctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    ||||| ||||||||||  || || |||||||||||||||||||||||||||||||||||||    
T  14669367 ctcgcgaggcgagttcaactactcgctatggcgagctgcgacgtgcaactcgcgaggcggg 14669427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 16097793 - 16097899
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||| || |||||| |    |||| |||||| |||||||| ||||||||| || | | ||||||||||||||| | ||||||||||    
T  16097793 caactcaaaagtcaaaattacgaaatctggatagctctttggtcatgctcgctatggcgagttcatccgttcgctatggcgagctgcaaggtgcaactcg 16097892  T
Q  100 cgaggcg 106  Q
    |||||||    
T  16097893 cgaggcg 16097899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 21837983 - 21838076
Alignment:
Q  13 caaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    ||||||||||||||| ||  ||||| |||||||| ||||||| |||||||   |||||| ||||||||||||||| | |||||||||||||||||    
T  21837983 caaaatcacaaaatcatgtttcctcactggtcaaactcgctatggcgagtga-tctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 21838076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 49667742 - 49667636
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||  || |||||| |    ||||||||||| |||||||| ||||||||| |||| | ||||||||||| |||| |||||||||||    
T  49667742 caactcaaaagtcaaaagtacgaaatctggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagttgcgtcgtgcaactcg 49667643  T
Q  100 cgaggcg 106  Q
    | |||||    
T  49667642 caaggcg 49667636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 17524833 - 17524727
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||  ||  |||  | ||| |||||| |||| |||||||| |||||||||   || | ||| ||||||||||||||||||||||||    
T  17524833 caactcaaaagtcaaaaatactgaattctacatgctctctagtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcg 17524734  T
Q  100 cgaggcg 106  Q
    |||||||    
T  17524733 cgaggcg 17524727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 43927663 - 43927756
Alignment:
Q  13 caaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    ||||||||||||||| ||  ||||| |||||||| ||||||| |||||||   |||||| |||| |||||||||| || ||||||||||||||||    
T  43927663 caaaatcacaaaatcatgtttcctcactggtcaaactcgctatggcgagtga-tctgctcgctacggcgagctgcaacatgcaactcgcgaggcg 43927756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 22109903 - 22109830
Alignment:
Q  33 tcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 105  Q
    ||||| ||||||| |||||||| ||||||||| |||||| ||||||||||||||| | |  |||||||||||||    
T  22109903 tcctcactggtcatgctcgctatggcgagttcatctgctcgctatggcgagctgcaaggaacaactcgcgaggc 22109830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 52523351 - 52523279
Alignment:
Q  35 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    |||||||||||  ||||||||||||||    ||||| ||||||||||||||| | |||||||||||||||||||    
T  52523351 ctctctggtcacactcgctaggcgagtgaa-ctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 52523279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 12171741 - 12171669
Alignment:
Q  35 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    ||||||||||| |||| ||| |||||||||  ||| | || |||||||||||||| |||||||||||||||||    
T  12171741 ctctctggtcatgctcactatggcgagttcaactgttcgcaatggcgagctgcgaggtgcaactcgcgaggcg 12171669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 32308186 - 32308237
Alignment:
Q  55 ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    ||||||||| |||  | ||||||||||||||||| |||||||||||||||||    
T  32308186 ggcgagttcatctattcgctatggcgagctgcgaggtgcaactcgcgaggcg 32308237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 106
Target Start/End: Complemental strand, 321596 - 321567
Alignment:
Q  77 ggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    ||||||||||||||||||||||||||||||    
T  321596 ggcgagctgcgacgtgcaactcgcgaggcg 321567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 379353 - 379404
Alignment:
Q  154 tagtgtggcttagcaagacgtttaat---aaaaagggcaagattgtcatttc 202  Q
    ||||||||||||||||||| ||||||   |||||||||||||| ||||||||    
T  379353 tagtgtggcttagcaagacttttaataaaaaaaagggcaagatggtcatttc 379404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 2050825 - 2050753
Alignment:
Q  35 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    |||||||||||  ||||||||||||||    ||||| ||||||||||||||| | |||||||| ||||||||||    
T  2050825 ctctctggtcacactcgctaggcgagtgaa-ctgctcgctatggcgagctgcaaggtgcaacttgcgaggcggg 2050753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 22791798 - 22791846
Alignment:
Q  38 tctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 86  Q
    ||||||||  |||||||||||||||  |||||| |||||||||||||||    
T  22791798 tctggtcacactcgctaggcgagttaatctgctcgctatggcgagctgc 22791846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 718 - 600
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||    
T  718 caactcaaaagtcaaaattacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctacgacgtgcaactcgc 619  T
Q  101 gaggcggggaaaggttacc 119  Q
    |||||||||||| ||||||    
T  618 gaggcggggaaaagttacc 600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 91; Significance: 3e-44; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 167648 - 167530
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||    
T  167648 caactcaaaagtcaaaattacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctacgacgtgcaactcgc 167549  T
Q  101 gaggcggggaaaggttacc 119  Q
    |||||||||||| ||||||    
T  167548 gaggcggggaaaagttacc 167530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 52375 - 52490
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||| ||    
T  52375 caactcaaaagtcaaaatcaaaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacatgcaacttgc 52474  T
Q  101 gaggcggggaaaggtt 116  Q
     |||||||||||||||    
T  52475 aaggcggggaaaggtt 52490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 88; Significance: 2e-42; HSPs: 3)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 805 - 920
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| |||||||  |  ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  805 caactcaaaagtcaaaatcacgaaatcttaaaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgc 904  T
Q  101 gaggcggggaaaggtt 116  Q
    ||||||||||||||||    
T  905 gaggcggggaaaggtt 920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3933 - 3985
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgct 53  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  3933 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgct 3985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 3987 - 4027
Alignment:
Q  76 tggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 116  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  3987 tggcgagctgcgacgtgcaactcgcgaggcagggaaaggtt 4027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 88; Significance: 2e-42; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 125045 - 125160
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||| |     
T  125045 caactcaaaagtcaaaatcaccaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagttgcgacgtgcaacttgt 125144  T
Q  101 gaggcggggaaaggtt 116  Q
    ||||||||||||||||    
T  125145 gaggcggggaaaggtt 125160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 175227 - 175333
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||| || ||||||||||| ||||||||||| |||||||| |||||||||   || | ||| ||||||||||||||||||||||||    
T  175227 caactcaaaagtcaaaattacgaaatcttgcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcg 175326  T
Q  100 cgaggcg 106  Q
    |||||||    
T  175327 cgaggcg 175333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 63024 - 63130
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||| | || |||||| |    ||||||||||| |||||||| ||||||||| |||| | ||||||||||||||| | ||||||||||    
T  63024 caactcaaaagtcaaatttacgaaatctggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcaaggtgcaactcg 63123  T
Q  100 cgaggcg 106  Q
    |||||||    
T  63124 cgaggcg 63130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 5779 - 5662
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||| |||| ||| ||||||||||| ||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  5779 caactcaaaagtaaaaaacacgaaatcttgcatgctctctggtcaagcttgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgc 5680  T
Q  101 gaggcggggaaaggttac 118  Q
    ||||||||||||| ||||    
T  5679 gaggcggggaaagtttac 5662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 3e-41; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 23286313 - 23286430
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||| || ||||||||||| |||||| |||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||    
T  23286313 caactcaaaagtcaaaattacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaacgtgcaactcgc 23286412  T
Q  101 gaggcggggaaaggttac 118  Q
    |||||||||||| |||||    
T  23286413 gaggcggggaaaagttac 23286430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 23654068 - 23653951
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||| |  ||||||||||| ||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  23654068 caactcaaaagtcaaaattatgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatcttctcgctatggcgagctgcgacgtgcaactcgc 23653969  T
Q  101 gaggcggggaaaggttac 118  Q
    |||||||||||| |||||    
T  23653968 gaggcggggaaaagttac 23653951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 23660485 - 23660592
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||||    
T  23660485 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgc 23660584  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  23660585 gaggcggg 23660592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 27754038 - 27754153
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||  |||||| |||||| ||||||||||||||| |||||||||||||    
T  27754038 caactcaaaagtcaaaatcacgaaatcttgcatgctatctggtcaagctcgctagcagagttcatctgctcgctatggcgagctgcaacgtgcaactcgc 27754137  T
Q  101 gaggcggggaaaggtt 116  Q
    ||||||||||||||||    
T  27754138 gaggcggggaaaggtt 27754153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 28291960 - 28291857
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  || ||||||||||| ||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||    
T  28291960 caactcaaaagtcaaaaatacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgc 28291861  T
Q  101 gagg 104  Q
    ||||    
T  28291860 gagg 28291857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 298473 - 298369
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||  ||||| ||||||||||| ||||||||||||||||    
T  298473 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctatggcgagttcagctgctcgctatggcgagttgcgacgtgcaactcg 298374  T
Q  100 cgagg 104  Q
    |||||    
T  298373 cgagg 298369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 23076903 - 23077016
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||| || |||||||||||| ||||||||||| |||| |  ||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||    
T  23076903 caacttaatagtcaaaatcacgaaatcttgcatgctctgt--tcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcatctcgc 23077000  T
Q  101 gaggcggggaaaggtt 116  Q
    ||||||||||||||||    
T  23077001 gaggcggggaaaggtt 23077016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 23060817 - 23060908
Alignment:
Q  25 atcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 116  Q
    ||||||||| |||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||| |||||||||||    
T  23060817 atcttgcatgctctttggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaacccgcgaggtggggaaaggtt 23060908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 20309557 - 20309662
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | | ||||||||||||||| |||||||||||    
T  20309557 caactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgatatggcgagctgcgatgtgcaactcgc 20309656  T
Q  101 gaggcg 106  Q
    ||||||    
T  20309657 gaggcg 20309662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 22337578 - 22337685
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||| |||||| ||||||||||| |||||| |||||||||||||||||||||| |||||| |||||||||||||||   ||||| ||| |    
T  22337578 caactcaaaagtcagaatcacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcagggtgcatctcac 22337677  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  22337678 gaggcggg 22337685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 22730891 - 22730776
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||| |||||||| |||| |||||| |||||| ||| |||||||||||| ||||| |||||| ||||||||||||| ||| |||||||||||    
T  22730891 caactcaaaagttaaaatcacgaaatattgcatgctctctagtcgagctcgctaggccagttcatctgctcgctatggcgagctacgatgtgcaactcgc 22730792  T
Q  101 gaggcggggaaaggtt 116  Q
     ||||||||| |||||    
T  22730791 aaggcggggagaggtt 22730776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 22737838 - 22737735
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| |||||||||||  ||||| ||||||||||||| |||||||| |||||| |||| |||||||| ||||||| |||||||    
T  22737838 caactcaaaagtcaaaatcacgaaatcttgcatgatctctagtcaagctcgctacgcgagttcatctgctcgctagggcgagcttcgacgtggaactcgc 22737739  T
Q  101 gagg 104  Q
    ||||    
T  22737738 gagg 22737735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 32451587 - 32451479
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 98  Q
    ||||||||||||||||||||| |||| ||| ||  ||||||||||| |||||||| ||||||||| ||||||||||||||||||||||| ||||||||||    
T  32451587 caactcaaaagtcaaaatcacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgcttgctatggcgagctgcgtcgtgcaactc 32451489  T
Q  99 gcgaggcggg 108  Q
    ||||||||||    
T  32451488 gcgaggcggg 32451479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 37783 - 37680
Alignment:
Q  3 actcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 102  Q
    |||||||||||||||  || |||| |||||| || ||||||| |||||||||||||||||| |||| | |||||||||||||||||| ||||||| ||||    
T  37783 actcaaaagtcaaaaatacgaaattttgcatgctttctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacatgcaacttgcga 37684  T
Q  103 ggcg 106  Q
    ||||    
T  37683 ggcg 37680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 23100889 - 23100785
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||| || ||||||||||| ||||||||||| ||| |||| |||||||||   || | ||| |||| |||||||||||||||||||    
T  23100889 caactcaaaagtcaaaattacgaaatcttgcatgctctctggtcatgcttgctatggcgagttcagttgttcgctgtggctagctgcgacgtgcaactcg 23100790  T
Q  100 cgagg 104  Q
    |||||    
T  23100789 cgagg 23100785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 22740619 - 22740513
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    ||||||||||||| |||  ||| |||||| ||| ||||||||||| |||||||| |||||||||   || | ||| ||||||||||||||||||||||||    
T  22740619 caactcaaaagtccaaactacataatcttacatgctctctggtcatgctcgctatggcgagttcggttgttcgctgtggcgagctgcgacgtgcaactcg 22740520  T
Q  100 cgaggcg 106  Q
    |||||||    
T  22740519 cgaggcg 22740513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 40621833 - 40621762
Alignment:
Q  35 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    |||||||||||||||||||||||||||||   || | | | |||||||||||||||||||||||||||||||    
T  40621833 ctctctggtcaagctcgctaggcgagttcagttgttcgttgtggcgagctgcgacgtgcaactcgcgaggcg 40621762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 22758374 - 22758268
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    ||||||||||||| |||  ||| |||||| ||| ||||||||||| |||||||| |||||||||   || | | | ||||||||||||||||||||||||    
T  22758374 caactcaaaagtccaaactacataatcttacatgctctctggtcatgctcgctatggcgagttcggttgttcgatgtggcgagctgcgacgtgcaactcg 22758275  T
Q  100 cgaggcg 106  Q
    |||||||    
T  22758274 cgaggcg 22758268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 7679792 - 7679866
Alignment:
Q  34 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    ||||||||||||  ||||||||||||||   |||||| | ||||||||||||| | |||||||||||||||||||    
T  7679792 cctctctggtcacactcgctaggcgagtgaatctgctcgatatggcgagctgcaaggtgcaactcgcgaggcggg 7679866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 24658100 - 24658213
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  ||| |||    ||| |||||| ||| ||||||||||||||||||  ||| | |   ||||||||||| |||||||||| ||    
T  24658100 caactcaaaagtcaaaaatacagaattcaacatgctctctagtctagctcgctaggcgagttcaactgttcgtcgtggcgagctgcaacgtgcaacttgc 24658199  T
Q  101 gaggcggggaaagg 114  Q
    ||||||||||||||    
T  24658200 gaggcggggaaagg 24658213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 22133841 - 22133769
Alignment:
Q  35 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    ||||||||||| |||||||| ||||||||| |||| | |||| | |||||||||||||||||||||| |||||    
T  22133841 ctctctggtcatgctcgctatggcgagttcatctgttcgctacgacgagctgcgacgtgcaactcgcaaggcg 22133769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 23038541 - 23038599
Alignment:
Q  47 gctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 105  Q
    ||||||||||||||| | |||||| | | ||||||||||| ||||||||||||||||||    
T  23038541 gctcgctaggcgagtacatctgctcgttgtggcgagctgcaacgtgcaactcgcgaggc 23038599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 20519711 - 20519670
Alignment:
Q  66 ctgcttgctatggcgagctgcgacgtgcaactcgcgaggcgg 107  Q
    ||||| ||||||||||||||| | ||||||||||||||||||    
T  20519711 ctgctcgctatggcgagctgcaaggtgcaactcgcgaggcgg 20519670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 105
Target Start/End: Complemental strand, 22798709 - 22798680
Alignment:
Q  76 tggcgagctgcgacgtgcaactcgcgaggc 105  Q
    ||||||||||||||||||||||||||||||    
T  22798709 tggcgagctgcgacgtgcaactcgcgaggc 22798680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 22811593 - 22811488
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||| ||||||| |  ||| ||||||||||| ||| |||| |||||||     |||| ||| ||||||||| |||| || ||||||    
T  22811593 caactcaaaagtcaaaattacaaaatttaacatgctctctggtcatgcttgctatggcgagtaagattgctcgctgtggcgagctacgacttgtaactcg 22811494  T
Q  100 cgaggc 105  Q
    ||||||    
T  22811493 cgaggc 22811488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 25176341 - 25176410
Alignment:
Q  37 ctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    |||||||||  ||||||||||||||   |||||| ||||||| ||||||| | ||||||||| |||||||    
T  25176341 ctctggtcacactcgctaggcgagtgaatctgctcgctatggtgagctgcaaggtgcaactcacgaggcg 25176410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 22412648 - 22412612
Alignment:
Q  72 gctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    ||||||||||||||| | |||||||||||||||||||    
T  22412648 gctatggcgagctgcaaggtgcaactcgcgaggcggg 22412612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 23705890 - 23705830
Alignment:
Q  48 ctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    |||| |||||||||   |||||| | ||||||||||||| | |||||||||||||||||||    
T  23705890 ctcgataggcgagtgaatctgctcgttatggcgagctgcaaagtgcaactcgcgaggcggg 23705830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 15273 - 15161
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||    
T  15273 caactcaaaagtcaaaatcacgatatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtacaactcgc 15174  T
Q  101 gaggcggggaaag 113  Q
    |||||||| ||||    
T  15173 gaggcgggtaaag 15161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2044 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold2044
Description:

Target: scaffold2044; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 1114 - 999
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||| |    
T  1114 caactcaaaagtcaaaatcacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcagctgctcgctatggcgaggtgcgacgtgcaactcac 1015  T
Q  101 gaggcggggaaaggtt 116  Q
    ||||||||||||||||    
T  1014 gaggcggggaaaggtt 999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 1736 - 1621
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||| |||| | ||||||||||||||| |||||||||||||    
T  1736 caactcaaaagtcaaaatcacagaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcaacgtgcaactcgc 1637  T
Q  101 gaggcggggaaaggtt 116  Q
    |||||||| |||||||    
T  1636 gaggcgggaaaaggtt 1621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 13555 - 13670
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||| |||||| ||||| ||||||||||| |||||||||||    
T  13555 caactcaaaagtcaaaatcacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcatctgctcgctattgcgagctgcgatgtgcaactcgc 13654  T
Q  101 gaggcggggaaaggtt 116  Q
    ||||||||| ||||||    
T  13655 gaggcgggggaaggtt 13670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 34583 - 34688
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||| |||||||||||||||||    
T  34583 caactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagttgcgacgtgcaactcgc 34682  T
Q  101 gaggcg 106  Q
    ||||||    
T  34683 gaggcg 34688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 21353 - 21464
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||| ||| || ||||||||||||||| |||||||||||||    
T  21353 caactcaaaagtcaaaattacaaaatcttgcatgctctctagtcaagctcgctaggcgagttcatctcctcgctatggcgagctgcaacgtgcaactcgc 21452  T
Q  101 gaggcggggaaa 112  Q
    ||||||||||||    
T  21453 gaggcggggaaa 21464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 20084 - 19969
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||| |||||| |||||| |||||||||||||||||| ||||||||||    
T  20084 caactcaaaagtcaaattcacgaaatcttgcatgctctctggtcaagctcgctaggtgagttcatctgctcgctatggcgagctgcgacatgcaactcgc 19985  T
Q  101 gaggcggggaaaggtt 116  Q
    |||||| |||||||||    
T  19984 gaggcgaggaaaggtt 19969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 65452 - 65346
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||  |||||||||| ||| ||||||||||| |||||||| |||||||||   || | ||| ||||||||||||||||||||||||    
T  65452 caactcaaaagtcaaaactacaaaatcttacatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcg 65353  T
Q  100 cgaggcg 106  Q
    |||||||    
T  65352 cgaggcg 65346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 17665 - 17559
Alignment:
Q  2 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 101  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||    
T  17665 aactcaaaagtcaaaatcatgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctacgacgtgcaactcgcg 17566  T
Q  102 aggcggg 108  Q
    |||||||    
T  17565 aggcggg 17559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 13266 - 13150
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||| || ||||||||||| |||||||||||||||||||||| |||||| |||||| ||| ||||||||||||||||||||||| |    
T  13266 caactcaaaagtcaaaattacgaaatcttgcatgctctctggtcaagctcgctaggagagttcatctgctcgctgtggcgagctgcgacgtgcaactcac 13167  T
Q  101 gaggcggggaaaggtta 117  Q
    |||||||||||| ||||    
T  13166 gaggcggggaaaagtta 13150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 388 - 492
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||    
T  388 caactcaaaagtcaaaattacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgc 487  T
Q  101 gaggc 105  Q
    |||||    
T  488 gaggc 492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 5164 - 5268
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||    
T  5164 caactcaaaagtcaaaattacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgc 5263  T
Q  101 gaggc 105  Q
    |||||    
T  5264 gaggc 5268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 18613 - 18509
Alignment:
Q  4 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgag 103  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| || ||||||||||||||| ||||| ||||||||||    
T  18613 ctcaaaagtcaaaatcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatcttctcgctatggcgagctgcaacgtgaaactcgcgag 18514  T
Q  104 gcggg 108  Q
    |||||    
T  18513 gcggg 18509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 16873 - 16761
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||| |||||||||| ||  ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||    
T  16873 caactcgaaagtcaaaaacaagaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgatgtgcaactcgc 16774  T
Q  101 gaggcggggaaag 113  Q
    |||||||||||||    
T  16773 gaggcggggaaag 16761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 79020 - 78905
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||| ||| |||||||||||||| |||||||||| ||||||| ||||||||||   || | || |||| ||||||| |||||||||||||    
T  79020 caactcaaaagtcagaattacaaaatcttgcatgctctctggtctagctcgcgaggcgagttcaagtgttcgccatggggagctgcaacgtgcaactcgc 78921  T
Q  101 gaggcggggaaaggtt 116  Q
    || |||||||||||||    
T  78920 gatgcggggaaaggtt 78905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 367 - 474
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||||| | |||||||||||    
T  367 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggggagttcatctgctcgctatggcgagctgcaaggtgcaactcgc 466  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  467 gaggcggg 474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 671 - 556
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||| || ||||||||||||||||||| ||  ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  671 caactcgaaggtcaaaatcacaaaatcttacaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgc 572  T
Q  101 gaggcggggaaaggtt 116  Q
     ||| |||||||||||    
T  571 aaggtggggaaaggtt 556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 80; Significance: 1e-37; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 4971 - 5082
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||  |||||| |||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||||    
T  4971 caactcaaaagtcaaaatcacgaaatcttgcaagctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgc 5070  T
Q  101 gaggcggggaaa 112  Q
    ||||||||||||    
T  5071 gaggcggggaaa 5082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 12553 - 12664
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||  |||||| |||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||||    
T  12553 caactcaaaagtcaaaatcacgaaatcttgcaagctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgc 12652  T
Q  101 gaggcggggaaa 112  Q
    ||||||||||||    
T  12653 gaggcggggaaa 12664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 22505 - 22616
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||  |||||| |||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||||    
T  22505 caactcaaaagtcaaaatcacgaaatcttgcaagctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgc 22604  T
Q  101 gaggcggggaaa 112  Q
    ||||||||||||    
T  22605 gaggcggggaaa 22616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 25723 - 25608
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||| ||  ||||||||||  |||||| |||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  25723 caactcaaaagtcaaaaacatgaaatcttgcaagctctctagtcaagctcgctaggcgagttcatctactcgctatggcgagctgcgacgtgcaactcgc 25624  T
Q  101 gaggcggggaaaggtt 116  Q
    ||||||||||||||||    
T  25623 gaggcggggaaaggtt 25608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 33152 - 33048
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||| |||||||| ||||||||||  ||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  33152 caactcaaaagtgaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcaagctgcgacgtgcaactcgc 33053  T
Q  101 gaggc 105  Q
    |||||    
T  33052 gaggc 33048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 10621 - 10732
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||| ||||| |||||| ||||||||||||||| | |||||||||||    
T  10621 caactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcaagttcatctgctcgctatggcgagctgcaaggtgcaactcgc 10720  T
Q  101 gaggcggggaaa 112  Q
    ||||||||||||    
T  10721 gaggcggggaaa 10732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 23960 - 23856
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| |||||| |||||||| ||||||||||||| || ||| |||||||||||||||||||||||||||||    
T  23960 caactcaaaagtcaaaatcacgaaatcttgcatgctctctagtcaagcttgctaggcgagttcatccgctcgctatggcgagctgcgacgtgcaactcgc 23861  T
Q  101 gaggc 105  Q
    |||||    
T  23860 gaggc 23856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 620 - 513
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||| ||||   |||||||||||    
T  620 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgacctgcagggtgcaactcgc 521  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  520 gaggcggg 513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 8149 - 8044
Alignment:
Q  2 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||| || |||||||||| ||||||||||  |||||||||||  ||||||| |||||||     |||| ||||||||||||||||| |||||||||||    
T  8149 aactcacaactcaaaatcacgaaatcttgcaagctctctggtcagactcgctacggcgagtaaacttgctcgctatggcgagctgcgaagtgcaactcgc 8050  T
Q  101 gaggcg 106  Q
    ||||||    
T  8049 gaggcg 8044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 24308 - 24193
Alignment:
Q  2 aactcaaaagtcaaaa-tcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||| |||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| |||||||||||||    
T  24308 aactcaaaagtcaaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgc 24209  T
Q  101 gaggcggggaaaggtt 116  Q
    |||||| |||||||||    
T  24208 gaggcgaggaaaggtt 24193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 39589 - 39474
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||  |||||| |||| |||||||||||||||||| |||||||||| |||||| |||||||||||||||  ||||| ||||||    
T  39589 caactcaaaagtcaaaatcatgaaatctggcatgctctctggtcaagctcgcgaggcgagttcatctgctcgctatggcgagctgcatcgtgctactcgc 39490  T
Q  101 gaggcggggaaaggtt 116  Q
    ||||||||||||||||    
T  39489 gaggcggggaaaggtt 39474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 40319 - 40422
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||| | |||||| |||||||| ||||||   |||||||||||    
T  40319 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcactaggcgagtacatctgctcgctatggctagctgcagggtgcaactcgc 40418  T
Q  101 gagg 104  Q
    ||||    
T  40419 gagg 40422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 4800 - 4695
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | |||||||||||||||||||||||||||||    
T  4800 caactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgc 4701  T
Q  101 gaggcg 106  Q
    ||||||    
T  4700 gaggcg 4695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 14940 - 15057
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||| ||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||   || |||| |||||||||||| |||||||||||||    
T  14940 caactctaaagtcaaaattacaaaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgtttgccatggcgagctgcaacgtgcaactcgc 15039  T
Q  101 gaggcggggaaaggttac 118  Q
    |||||||||||| |||||    
T  15040 gaggcggggaaaagttac 15057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 8938 - 9022
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctg 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  8938 caactcaaaagtcaaaatcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctg 9022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 6483 - 6371
Alignment:
Q  4 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgag 103  Q
    |||||||||||||||||  ||||||||||| |||| | |||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||    
T  6483 ctcaaaagtcaaaatcatgaaatcttgcattctctatagtcaagctcgctaggcgagttcatctgctcgctatggcgaggtgcgacgtgcaactcgcgag 6384  T
Q  104 gcggggaaaggtt 116  Q
    |||| | ||||||    
T  6383 gcggagcaaggtt 6371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 10607 - 10711
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||| ||||||||||| ||||||||||  ||||||||||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||||    
T  10607 caactcaaaggtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgc 10706  T
Q  101 gaggc 105  Q
    |||||    
T  10707 gaggc 10711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 2743 - 2636
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| ||||||  |||||||||||||| | ||||||||||     
T  2743 caactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcactatggcgagctgcaaggtgcaactcgt 2644  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  2643 gaggcggg 2636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 494 - 605
Alignment:
Q  5 tcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 104  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||||||||     
T  494 tcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcgaga 593  T
Q  105 cggggaaaggtt 116  Q
     | |||||||||    
T  594 agaggaaaggtt 605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 8191 - 8076
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| || ||||||  |||||||||||||||| |||||||| ||    
T  8191 caactcaaaagtcaaaatcacgaaatcttgcatgctctttggtcaagctcgctaggcgagctcatctgctccctatggcgagctgcgatgtgcaacttgc 8092  T
Q  101 gaggcggggaaaggtt 116  Q
    |||| ||| |||||||    
T  8091 gaggtgggaaaaggtt 8076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 79990 - 79887
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||  || || ||||||||||||||| |||||||||||||    
T  79990 caactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaacttctcgctatggcgagctgcaacgtgcaactcgc 79891  T
Q  101 gagg 104  Q
    ||||    
T  79890 gagg 79887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 2404 - 2521
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||||| ||||||||||| ||||| |||  ||||||    
T  2404 caactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgctcgctatggcgagttgcgaggtgttactcgc 2503  T
Q  101 gaggcggggaaaggttac 118  Q
    |||||||| |||||||||    
T  2504 gaggcgggaaaaggttac 2521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 16731 - 16836
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||| |||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | |||||||||||||||||||||||||||||    
T  16731 caacttaaaagtcaaaagtacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgc 16830  T
Q  101 gaggcg 106  Q
    ||||||    
T  16831 gaggcg 16836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 106
Target Start/End: Original strand, 16881 - 16911
Alignment:
Q  76 tggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    |||||||||||||||||||||||||||||||    
T  16881 tggcgagctgcgacgtgcaactcgcgaggcg 16911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 16121 - 16238
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||| ||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||   || | || |||||||||||| |||||||||||||    
T  16121 caactctaaagtcaaaattacaaaatcttgcatgctctctggtctagctcgctaggcgagttcaattgttcgccatggcgagctgcaacgtgcaactcgc 16220  T
Q  101 gaggcggggaaaggttac 118  Q
    |||||||||||| |||||    
T  16221 gaggcggggaaaagttac 16238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 1800 - 1906
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||| || ||||||| ||| ||||||||||  |||||||| |||||||||   || |  || ||||||| ||||||||||||||||    
T  1800 caactcaaaagtcaaaattacgaaatcttacatgctctctggtcctgctcgctatggcgagttcaattgttcactgtggcgagttgcgacgtgcaactcg 1899  T
Q  100 cgaggcg 106  Q
    |||||||    
T  1900 cgaggcg 1906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 20575 - 20682
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| || ||| |||||||||||||||   ||||||||| |    
T  20575 caactcagaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatccgctcgctatggcgagctgcagggtgcaactcac 20674  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  20675 gaggcggg 20682  T

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Target: scaffold0070 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 4986 - 5093
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||| ||| |||| ||||||||||  ||||||||||||| ||||||||||||||| |||||| ||||||||||||||| | |||||||||||    
T  4986 caactcaaaagttaaagtcacgaaatcttgcaagctctctggtcaagatcgctaggcgagttcatctgctcgctatggcgagctgcaatgtgcaactcgc 5085  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  5086 gaggcggg 5093  T

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Target: scaffold0120 (Bit Score: 67; Significance: 7e-30; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 46390 - 46500
Alignment:
Q  3 actcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 102  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||| |||| |||||||||| |||||| ||||||||||||||| | || ||||||||||    
T  46390 actcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagttcgcgaggcgagttcatctgctcgctatggcgagctgcaaggtacaactcgcga 46489  T
Q  103 ggcggggaaag 113  Q
    |||||| ||||    
T  46490 ggcgggtaaag 46500  T

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Target: scaffold0120; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 32615 - 32510
Alignment:
Q  3 actcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 102  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||| |||| |||||||||| |||||| ||||||||||||||| | || ||||||||||    
T  32615 actcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagttcgcgaggcgagttcatctgctcgctatggcgagctgcaaggtacaactcgcga 32516  T
Q  103 ggcggg 108  Q
    ||||||    
T  32515 ggcggg 32510  T

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Target: scaffold0120; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 16549 - 16656
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||||   ||||||||||| |||||| ||||||||||||||| || ||| | |||| | |||||||||||||   |||||||| ||    
T  16549 caactcaaaagtcaaaatcttgaaatcttgcatgctctctcgtcaagctcgctaggtgatttcatttgctcgttatggcgagctgcatggtgcaacttgc 16648  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  16649 gaggcggg 16656  T

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Target: scaffold0598 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 721 - 616
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  || |||||||| || |||||||||| |||||||||||||||||| | || ||||||||||||||||||||||||||||| |    
T  721 caactcaaaagtcaaaaatacgaaatcttgaatgctctctggtctagctcgctaggcgagttcatatgtttgctatggcgagctgcgacgtgcaactcac 622  T
Q  101 gaggcg 106  Q
    ||||||    
T  621 gaggcg 616  T

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Target: scaffold0456 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 10091 - 9990
Alignment:
Q  5 tcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 104  Q
    |||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||    
T  10091 tcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcaacgtgcaactcgcgagg 9992  T
Q  105 cg 106  Q
    ||    
T  9991 cg 9990  T

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Target: scaffold0427 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 13947 - 14051
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  || ||||||||||| |||||||||| |||||||||||| ||||| |||| | |||||||||||||||||| ||||||||||    
T  13947 caactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcaagttcatctgttcgctatggcgagctgcgacatgcaactcgc 14046  T
Q  101 gaggc 105  Q
    |||||    
T  14047 gaggc 14051  T

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Target: scaffold0346 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 17382 - 17267
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||| |||||||||||||| |||||| ||| |||||||||||||||||||  |  | || |||||||||||| |||||||||||||    
T  17382 caactcaaaagtcaaaattacaaaatcttgcatgctctcttgtctagctcgctaggcgagttccagttttcgccatggcgagctgcaacgtgcaactcgc 17283  T
Q  101 gaggcggggaaaggtt 116  Q
    ||| ||||||| ||||    
T  17282 gagacggggaagggtt 17267  T

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Target: scaffold0192 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 10373 - 10488
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||||||||||| ||| |||||| |||| |||||| ||||||||||  || || |||||||| |||||| ||||||||||||     
T  10373 caactcaaaagtcaaaatcacaaaatcttacatgctctctagtcaggctcgcgaggcgagttcaactactcgctatggcaagctgcaacgtgcaactcgt 10472  T
Q  101 gaggcggggaaaggtt 116  Q
    |||||| |||||||||    
T  10473 gaggcgaggaaaggtt 10488  T

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Target: scaffold0107 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 15088 - 14981
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||| |||||||| ||||||||||| |||||| ||||||||||| || |||||||  ||||| |||||||| |||||| |||||||||||||    
T  15088 caactcaaaagtgaaaatcacgaaatcttgcatgctctctagtcaagctcgcgagacgagttcaactgctcgctatggcaagctgcaacgtgcaactcgc 14989  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  14988 gaggcggg 14981  T

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Target: scaffold0423 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 10930 - 10825
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | |||||||||||||||||| ||||| ||||    
T  10930 caactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacttgcaattcgc 10831  T
Q  101 gaggcg 106  Q
     |||||    
T  10830 aaggcg 10825  T

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Target: scaffold0403 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 5300 - 5417
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||| |||||||||||||| |||||| ||| ||||||| ||||||||||   || | || ||||||||||||  ||||||||||||    
T  5300 caactcaaaagtcaaaattacaaaatcttgcatgctctctagtctagctcgcaaggcgagttcaagtgttcgccatggcgagctgcaccgtgcaactcgc 5399  T
Q  101 gaggcggggaaaggttac 118  Q
    ||||| ||||||||||||    
T  5400 gaggctgggaaaggttac 5417  T

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Target: scaffold0161 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 2103 - 1986
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||| ||||||||| |||||||||||||| |||||| ||| ||||||||||||||||||   || | ||  |||| |||||| |||||||||||||    
T  2103 caactcaacagtcaaaattacaaaatcttgcatgctctctagtctagctcgctaggcgagttcaagtgttcgccgtggcaagctgcaacgtgcaactcgc 2004  T
Q  101 gaggcggggaaaggttac 118  Q
    ||||||||||||||||||    
T  2003 gaggcggggaaaggttac 1986  T

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Target: scaffold0064 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 47438 - 47543
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||| |  || ||||||||||| |||||||||| |||||||||||||||||| | || | ||||||||||||||| |||||||||||||    
T  47438 caactcaaaagtcaacaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatttgttcgctatggcgagctgcaacgtgcaactcgc 47537  T
Q  101 gaggcg 106  Q
    ||||||    
T  47538 gaggcg 47543  T

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Target: scaffold0221 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 12464 - 12360
Alignment:
Q  4 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgag 103  Q
    |||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||||||||  || || ||||||||||| ||||||||| | ||||||||    
T  12464 ctcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaggctcgcgaggcgagttcaactactcgctatggcgagttgcgacgtgaagctcgcgag 12365  T
Q  104 gcggg 108  Q
    |||||    
T  12364 gcggg 12360  T

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Target: scaffold1992 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1992
Description:

Target: scaffold1992; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 255 - 373
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 98  Q
    ||||||||||||| ||||||| |||| ||| ||  ||||||||||| |||||||| ||||||||| |||||| |||| ||||||||||||||||||||||    
T  255 caactcaaaagtctaaatcacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgctcgctaaggcgagctgcgacgtgcaactc 353  T
Q  99 gcgaggcggggaaaggttac 118  Q
    |||||||||||||| |||||    
T  354 gcgaggcggggaaaagttac 373  T

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Target: scaffold0217 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 16257 - 16150
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||||||||||| |||||||||   |||| |||||||||||||||||| ||||| |||||| |||||||||| |||| | || ||||||||    
T  16257 caactcaaaagtcaaaatcacgaaatcttgctagctctgtggtcaagctcgctaggcaagttcatctgctcgctatggcgatctgcaaggtacaactcgc 16158  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  16157 gaggcggg 16150  T

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Target: scaffold0218 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 28938 - 28821
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||| ||||||||||||| |||||||||||||| |||||| ||| ||||||||||| ||||||   || | ||  ||||||||||| ||||||| |||||    
T  28938 caacccaaaagtcaaaattacaaaatcttgcatgctctctagtctagctcgctaggtgagttcaagtgttcgccgtggcgagctgcaacgtgcacctcgc 28839  T
Q  101 gaggcggggaaaggttac 118  Q
    ||||||||||||||||||    
T  28838 gaggcggggaaaggttac 28821  T

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Target: scaffold0218; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 108
Target Start/End: Complemental strand, 7641 - 7572
Alignment:
Q  39 ctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    ||||||| ||||||||||| ||||| |||||| ||||||||||||| |   |||||||||||||||||||    
T  7641 ctggtcatgctcgctaggcaagttcatctgctcgctatggcgagctacatggtgcaactcgcgaggcggg 7572  T

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Target: scaffold0142 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 17243 - 17351
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 98  Q
    ||||||||||||||||||||| |||| ||| ||  ||||||||||| |||||||| ||||||||| |||||| |||||||||||||||||||||||||||    
T  17243 caactcaaaagtcaaaatcacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgctcgctatggcgagctgcgacgtgcaactc 17341  T
Q  99 gcgaggcggg 108  Q
    | ||||||||    
T  17342 gtgaggcggg 17351  T

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Target: scaffold0114 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 15134 - 15029
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||| |||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| || | | || |||| |||||||||||||||||||||    
T  15134 caacttaaaagtcaaaaatacgaaatcttgcatgctctctggtccagctcgctaggcgagttcatcagttcgcgatggtgagctgcgacgtgcaactcgc 15035  T
Q  101 gaggcg 106  Q
    ||||||    
T  15034 gaggcg 15029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 32934 - 32829
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  || ||||||||||| |||||||||| |||||||| ||||||||| || | | |  ||||| ||||||||||||||||||||    
T  32934 caactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgcttggcgagttcatcagttcgagatggctagctgcgacgtgcaactcgc 32835  T
Q  101 gaggcg 106  Q
    ||||||    
T  32834 gaggcg 32829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 32516 - 32633
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  || ||||||||||| |||| ||||| ||||||||||||||||||   || |  |  ||||||||||| |||||||||||||    
T  32516 caactcaaaagtcaaaaatacgaaatcttgcatgctctttggtctagctcgctaggcgagttcaagtgttcaccgtggcgagctgcaacgtgcaactcgc 32615  T
Q  101 gaggcggggaaaggttac 118  Q
    ||||||||||||||||||    
T  32616 gaggcggggaaaggttac 32633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 17244 - 17171
Alignment:
Q  35 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||   |||||||||||||||||||    
T  17244 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcagggtgcaactcgcgaggcggg 17171  T

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Target: scaffold0555 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 1042 - 1146
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  || ||||||||||| ||||||||||||||| ||||||||||||   ||||| ||  ||||||| ||| |||||||||||||    
T  1042 caactcaaaagtcaaaaatacgaaatcttgcatgctctctggtcaagcttgctaggcgagttaggctgctcgcggtggcgagttgcaacgtgcaactcgc 1141  T
Q  101 gaggc 105  Q
    |||||    
T  1142 gaggc 1146  T

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Target: scaffold0555; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 10192 - 10108
Alignment:
Q  35 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 118  Q
    |||||||||||  ||||| | ||||||||| |||| | ||||||||||||||| | ||||||||||||||||| ||||| |||||    
T  10192 ctctctggtcacactcgcgatggcgagttcatctgttcgctatggcgagctgcaaggtgcaactcgcgaggcgaggaaaagttac 10108  T

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Target: scaffold0145 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 119
Target Start/End: Original strand, 39229 - 39330
Alignment:
Q  8 aaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcgg 107  Q
    ||||||||||| || ||||||||||| ||||||||||||||||||||||||||| | ||||||           ||||||||||||||||||||||||||    
T  39229 aaagtcaaaattacgaaatcttgcatgctctctggtcaagctcgctaggcgagtacatctgct----------cgctgcgacgtgcaactcgcgaggcgg 39318  T
Q  108 ggaaaggttacc 119  Q
    ||||||||||||    
T  39319 ggaaaggttacc 39330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 106
Target Start/End: Original strand, 1744 - 1844
Alignment:
Q  7 aaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 105  Q
    |||||||||||  || ||||||||||| ||||||||| | |||||||| |||||||||  ||| | ||| ||||||||||||||||||||||||||||||    
T  1744 aaaagtcaaaaatacgaaatcttgcatgctctctggttatgctcgctatggcgagttcagctgttcgctgtggcgagctgcgacgtgcaactcgcgaggc 1843  T
Q  106 g 106  Q
    |    
T  1844 g 1844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 106
Target Start/End: Original strand, 7721 - 7821
Alignment:
Q  7 aaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 105  Q
    |||||||||||  || ||||||||||| ||||||||| | |||||||| |||||||||  ||| | ||| ||||||||||||||||||||||||||||||    
T  7721 aaaagtcaaaaatacgaaatcttgcatgctctctggttatgctcgctatggcgagttcagctgttcgctgtggcgagctgcgacgtgcaactcgcgaggc 7820  T
Q  106 g 106  Q
    |    
T  7821 g 7821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 16114 - 16213
Alignment:
Q  5 tcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgag 103  Q
    |||||||||||||  || |||||||| || ||||||||||| |||||||| |||||||||   || | ||| ||||||||||||||||||||||||||||    
T  16114 tcaaaagtcaaaaatacgaaatcttggatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgcgag 16213  T

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Target: scaffold0309 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 7062 - 7168
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||  |  ||||||||| | |||||||||| ||||||||||||||||| | ||||| ||||||||||| ||||| |||  ||||||    
T  7062 caactcaaaagtcaaaaatatgaaatcttgcgtgctctctggtctagctcgctaggcgagtt-cactgctcgctatggcgagttgcgaggtgttactcgc 7160  T
Q  101 gaggcggg 108  Q
    ||||||||    
T  7161 gaggcggg 7168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 109
Target Start/End: Complemental strand, 2427 - 2353
Alignment:
Q  35 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcgggg 109  Q
    |||||||||||  |||||||||||| ||| |||| | || |||||||||||||||||||||||||||||||||||    
T  2427 ctctctggtcatactcgctaggcgaattcatctgttcgcaatggcgagctgcgacgtgcaactcgcgaggcgggg 2353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 28467 - 28361
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||  || |||||| |    ||||||||||| |||||||| ||||||||| |||| | ||||||||||||||| ||||||||||||    
T  28467 caactcaaaagtcaaaagtacgaaatctggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcaacgtgcaactcg 28368  T
Q  100 cgaggcg 106  Q
    |||||||    
T  28367 cgaggcg 28361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 7952 - 7890
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttc 63  Q
    ||||||||||||||||||||||||||||||||| |||||| |||| |||||| ||||||||||    
T  7952 caactcaaaagtcaaaatcacaaaatcttgcatgctctctagtcaggctcgcgaggcgagttc 7890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 190939 - 190833
Alignment:
Q  2 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 101  Q
    |||||||||||||||| |||| |||||||||| || ||| ||||||||||||||| |||||   |||||  |||||||||| ||| |||||||  |||||    
T  190939 aactcaaaagtcaaaaacacagaatcttgcatgctatctagtcaagctcgctaggtgagttaggctgctcactatggcgagttgcaacgtgcaggtcgcg 190840  T
Q  102 aggcggg 108  Q
    |||||||    
T  190839 aggcggg 190833  T

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Target: scaffold0017; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 192642 - 192536
Alignment:
Q  2 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 101  Q
    |||||||||||||||| |||| |||||||||| || ||| ||||||||||||||| |||||   |||||  |||||||||| ||| |||||||  |||||    
T  192642 aactcaaaagtcaaaaacacagaatcttgcatgctatctagtcaagctcgctaggtgagttaggctgctcactatggcgagttgcaacgtgcaggtcgcg 192543  T
Q  102 aggcggg 108  Q
    |||||||    
T  192542 aggcggg 192536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 70256 - 70362
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||  | |||||||||||| ||||||||||| |||||||| || |||||    || | ||| ||||||||||||||||||||||||    
T  70256 caactcaaaagtcaaaactataaaatcttgcatgctctctggtcatgctcgctatggtgagtttagttgttcgctgtggcgagctgcgacgtgcaactcg 70355  T
Q  100 cgaggcg 106  Q
    |||||||    
T  70356 cgaggcg 70362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 12395 - 12499
Alignment:
Q  5 tcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 102  Q
    ||||||||||||||||| |||| ||| ||  ||||||||||| |||||||| ||||||||| |||||| ||||||||| |||||||||||||||||  ||    
T  12395 tcaaaagtcaaaatcacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgctcgctatggcgggctgcgacgtgcaactcatga 12493  T
Q  103 ggcggg 108  Q
    ||||||    
T  12494 ggcggg 12499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 29001 - 29054
Alignment:
Q  3 actcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctagg 56  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  29001 actcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctagg 29054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 51542 - 51438
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 98  Q
    ||||||||||||||||||||| |||| ||| ||  ||||||||||| |||||||| |||||||||  ||||| ||||| | |||||||||||||||||||    
T  51542 caactcaaaagtcaaaatcacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcagctgctcgctatcgtgagctgcgacgtgcaactc 51444  T
Q  99 gcgagg 104  Q
    ||||||    
T  51443 gcgagg 51438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 33033 - 33105
Alignment:
Q  35 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    |||||||||||  ||||||||||||||    ||||| ||||||||||||||| | |||||||||||||||||||    
T  33033 ctctctggtcacactcgctaggcgagtgaa-ctgctcgctatggcgagctgcaatgtgcaactcgcgaggcggg 33105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 3395 - 3503
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||| || |||| | |    ||||||||||| |||||||| ||||||||| |||||| ||||||||||| ||||| ||||||||||    
T  3395 caactcaaaagtcaaaattacgaaatatggatagctctctggtcatgctcgctatggcgagttcatctgctcgctatggcgagttgcgaggtgcaactcg 3494  T
Q  100 cgaggcggg 108  Q
    | |||||||    
T  3495 caaggcggg 3503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 6999 - 7103
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||| || |||||| |    ||||||||||| |||||||| ||||||||| |||| | ||||||||||||||||  ||||||||||    
T  6999 caactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcggggtgcaactcg 7098  T
Q  100 cgagg 104  Q
    |||||    
T  7099 cgagg 7103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 1925 - 1854
Alignment:
Q  35 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    ||||| ||||| ||||||||||||||||| |||  | ||||||||||||| |||||||||||||||||||||    
T  1925 ctctcaggtcatgctcgctaggcgagttcatctattcgctatggcgagctacgacgtgcaactcgcgaggcg 1854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 2302 - 2196
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 98  Q
    |||||||||||||||||| || |||| ||| ||  ||||||||||| |||||||| ||||||||| |||| | ||||||||||||||| | |||||||||    
T  2302 caactcaaaagtcaaaattacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcaaggtgcaactc 2204  T
Q  99 gcgaggcg 106  Q
    ||||||||    
T  2203 gcgaggcg 2196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 36050 - 35935
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||| || |||||  |  | ||| |||||  |||||||||||||||| | |||||| ||| ||||||||||| | |||||||||||    
T  36050 caactcaaaagtcaaaattacgaaatcaaggttgctcactggttgagctcgctaggcgagtacatctgctcgctgtggcgagctgcaaagtgcaactcgc 35951  T
Q  101 gaggcggggaaaggtt 116  Q
    |||||| || ||||||    
T  35950 gaggcgagggaaggtt 35935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 9492 - 9382
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||||| ||||||  ||||||||||| || |||||||| ||||||     ||||||  ||||| |||||||||| |||| ||||||| |||||    
T  9492 caactcaaaagtcgaaatcatgaaatcttgcatgctatctggtcaggctcgc-----gagttcaactgctcgctatggcgaactgcaacgtgcacctcgc 9398  T
Q  101 gaggcggggaaaggtt 116  Q
    |||||| |||||||||    
T  9397 gaggcgaggaaaggtt 9382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 19308 - 19370
Alignment:
Q  54 aggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 116  Q
    ||||||||||  ||||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  19308 aggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcgaggcgaggaaaggtt 19370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 7274 - 7378
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||| || |||||| |    ||||||||||| |||||||| ||||||||| |||| | ||||||| ||||||| | ||||||||||    
T  7274 caactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatggagagctgcaaggtgcaactcg 7373  T
Q  100 cgagg 104  Q
    |||||    
T  7374 cgagg 7378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 8513 - 8586
Alignment:
Q  35 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    |||||||||||  ||||||||||||||   |||||| | ||||||||||||| | |||||||||  ||||||||    
T  8513 ctctctggtcacactcgctaggcgagtgaatctgctcgttatggcgagctgcaaggtgcaactcatgaggcggg 8586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 19729 - 19837
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctagg-cgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    ||||||| |||||||||| ||||||||| |    ||||||||||| |||||| | | ||| ||| |||| | ||||||||||||||||| ||||||||||    
T  19729 caactcagaagtcaaaattacaaaatctagatagctctctggtcatgctcgcaatgacgaattcatctgttcgctatggcgagctgcgaggtgcaactcg 19828  T
Q  100 cgaggcggg 108  Q
    |||||||||    
T  19829 cgaggcggg 19837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 101857 - 101965
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||| ||||| || ||||||   |  ||||||||||| |||| ||| ||||||||| || | | ||||||||| ||||||||||||||||||    
T  101857 caactcaaaagtaaaaattacgaaatctgaaaagctctctggtcatgctcactatggcgagttcatcagttcgctatggcgtgctgcgacgtgcaactcg 101956  T
Q  100 cgaggcggg 108  Q
    |||||||||    
T  101957 cgaggcggg 101965  T

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Target: scaffold0010 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 130370 - 130469
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||| || |||||| |    ||||||||||| |||||||| |||||||||  ||| | ||||||||||||||||| ||||||||||    
T  130370 caactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctcgctatggcgagttcaactgttcgctatggcgagctgcgaggtgcaactcg 130469  T

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Target: scaffold0324 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 15861 - 15967
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||||||||||||||  ||| |||  | ||| ||||||||||| |||||||| |||||||||   || | ||| |||||||||||||||| |||||||    
T  15861 caactcaaaagtcaaaaatacagaattctacatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgttcaactcg 15960  T
Q  100 cgaggcg 106  Q
    |||||||    
T  15961 cgaggcg 15967  T

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Target: scaffold0216 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 16780 - 16674
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    ||||||||||||||||| |||| |||  | ||| ||||||||||| |||||||| |||||||     |||||||||||||||||| |||| || ||||||    
T  16780 caactcaaaagtcaaaaacacagaattctacatgctctctggtcatgctcgctatggcgagtaaagttgcttgctatggcgagctacgacttgtaactcg 16681  T
Q  100 cgaggcg 106  Q
    |||||||    
T  16680 cgaggcg 16674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 1 - 55
Alignment:
Q  52 ctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    ||||||||| || |||| | |||||||||||||||||||||||||||||||||||    
T  1 ctaggcgagatcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 55  T

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Target: scaffold1895 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 1 - 54
Alignment:
Q  10 agtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttc 63  Q
    |||||||||||| ||||||||||  ||||||||||||||||||| |||||||||    
T  1 agtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctcggcgagttc 54  T

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Target: scaffold1257 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 1923 - 1850
Alignment:
Q  35 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    |||||||||||  ||||||||||||||   |||||| |||||||||| |||| | |||||||||||||||||||    
T  1923 ctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgaactgcaaggtgcaactcgcgaggcggg 1850  T

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Target: scaffold0032 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 52032 - 52136
Alignment:
Q  2 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||||||||| ||||  || ||||||||||  ||| ||||||| |||||||| |||||| || |||| | |||||||||| ||||||||||||||||||    
T  52032 aactcaaaagtaaaaaatacgaaatcttgcaagctc-ctggtcatgctcgctatggcgagctcatctgttcgctatggcgatctgcgacgtgcaactcgc 52130  T
Q  101 gaggcg 106  Q
     |||||    
T  52131 taggcg 52136  T

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Target: scaffold0001 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 161148 - 161260
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactc 98  Q
    |||||||||||||||||| || |||| ||| ||  ||||||||||| |||||||| ||||||||| |||| | |||||||||||||||   ||||||||     
T  161148 caactcaaaagtcaaaattacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcatggtgcaacta 161246  T
Q  99 gcgaggcggggaaa 112  Q
    |||||||| |||||    
T  161247 gcgaggcgaggaaa 161260  T

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Target: scaffold0476 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 8297 - 8369
Alignment:
Q  34 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    ||||||||||||  ||||||||||||||   |||||| ||||||||||||||| | || ||||||||||||||    
T  8297 cctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtccaactcgcgaggcg 8369  T

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Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 13450 - 13510
Alignment:
Q  48 ctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  13450 ctcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 13510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 29877 - 29771
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    ||||| |||||||||||| |||||||||| ||| |||||||  | ||||||||| |||||||     |||| |||||||||||||||   ||||||||||    
T  29877 caactaaaaagtcaaaattacaaaatcttacatgctctctgccctagctcgctatggcgagtaaggttgctcgctatggcgagctgcattgtgcaactcg 29778  T
Q  100 cgaggcg 106  Q
    |||||||    
T  29777 cgaggcg 29771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 41873 - 41767
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    ||||| |||||||||||| |||||||||| ||| |||||||  | ||||||||| |||||||     ||||| || |||||||||||   ||||||||||    
T  41873 caactaaaaagtcaaaattacaaaatcttacatgctctctgccctagctcgctatggcgagtaaggttgctttctttggcgagctgcattgtgcaactcg 41774  T
Q  100 cgaggcg 106  Q
    |||||||    
T  41773 cgaggcg 41767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 108
Target Start/End: Complemental strand, 7678 - 7608
Alignment:
Q  38 tctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    ||||||||  ||||||||||||||   ||||||  |||||||||||||||| ||||||||| |||||||||    
T  7678 tctggtcacactcgctaggcgagtgaatctgctccctatggcgagctgcgaggtgcaactcacgaggcggg 7608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 8616 - 8510
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    ||||||||| |||||||  ||  ||| || ||| ||||||||||| ||||| || |||||||||   || | ||| ||||||||||||||||||||||||    
T  8616 caactcaaaggtcaaaaataccgaattttacatgctctctggtcatgctcggtatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcg 8517  T
Q  100 cgaggcg 106  Q
    |||||||    
T  8516 cgaggcg 8510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 108
Target Start/End: Original strand, 11028 - 11098
Alignment:
Q  38 tctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    ||||||||  ||||||||||||||   |||||| ||||||||||||||| | ||||||||||| |||||||    
T  11028 tctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcaaggcggg 11098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 36918 - 37023
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||| || |||||  |  | ||| |||||  ||||||||||| |||| |   || | ||| |||||||||||||||||||||||||    
T  36918 caactcaaaagtcaaaattacgaaatcaaggttgctcactggttgagctcgctaggtgagtacagttgttcgctgtggcgagctgcgacgtgcaactcgc 37017  T
Q  101 gaggcg 106  Q
    ||||||    
T  37018 gaggcg 37023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 80863 - 80904
Alignment:
Q  65 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    |||||||||||||||||||||| | |||||||||||||||||    
T  80863 tctgcttgctatggcgagctgcaaggtgcaactcgcgaggcg 80904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 597 - 697
Alignment:
Q  5 tcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 104  Q
    |||||||||||||| || |||||| |    |||||||||||  ||||||||||||||   |||||| ||||||| ||||| | | |||||||||||||||    
T  597 tcaaaagtcaaaattacgaaatctggatagctctctggtcacactcgctaggcgagtgaatctgctcgctatggagagctacaaggtgcaactcgcgagg 696  T
Q  105 c 105  Q
    |    
T  697 c 697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 7076 - 7180
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||| ||| |||||||| || ||||| ||   ||||||||||||  ||||||| ||||||   |||||| ||||||||||||||| | ||||| |||||    
T  7076 caacttaaaggtcaaaattacgaaatcatgatgcctctctggtcacactcgctaagcgagtgaatctgctcgctatggcgagctgcaaggtgcacctcgc 7175  T
Q  101 gaggc 105  Q
    |||||    
T  7176 gaggc 7180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 14456 - 14560
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||| ||| |||||||| || ||||| ||   ||||||||||||  ||||||| ||||||   |||||| ||||||||||||||| | ||||| |||||    
T  14456 caacttaaaggtcaaaattacgaaatcatgatgcctctctggtcacactcgctaagcgagtgaatctgctcgctatggcgagctgcaaggtgcacctcgc 14555  T
Q  101 gaggc 105  Q
    |||||    
T  14556 gaggc 14560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 4181 - 4285
Alignment:
Q  3 actcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 101  Q
    |||||||||||||||  ||| |||  | ||| ||||||||||| |||||||| |||||||  |  || | ||| ||||||||||||||||||| ||||||    
T  4181 actcaaaagtcaaaagtacagaattctacatgctctctggtcatgctcgctatggcgagtaacattgttcgctgtggcgagctgcgacgtgcacctcgcg 4280  T
Q  102 aggcg 106  Q
    |||||    
T  4281 aggcg 4285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 8612 - 8716
Alignment:
Q  3 actcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 101  Q
    |||||||||||||||  ||| |||  | ||| ||||||||||| |||||||| |||||||  |  || | ||| ||||||||||||||||||| ||||||    
T  8612 actcaaaagtcaaaagtacagaattctacatgctctctggtcatgctcgctatggcgagtaacattgttcgctgtggcgagctgcgacgtgcacctcgcg 8711  T
Q  102 aggcg 106  Q
    |||||    
T  8712 aggcg 8716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 20443 - 20487
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtca 45  Q
    |||||||||||||||||  |||||||||||||| |||||||||||    
T  20443 caactcaaaagtcaaaactacaaaatcttgcatgctctctggtca 20487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 9542 - 9641
Alignment:
Q  4 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 102  Q
    |||||||||||||| |||| |||||||||| |||||||||| | ||||||| |||||||     |||| ||| |||||||||||  || |||||||||||    
T  9542 ctcaaaagtcaaaaacacagaatcttgcatgctctctggtctaactcgctatggcgagtaggattgctcgctgtggcgagctgcatcgcgcaactcgcga 9641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 9049 - 8986
Alignment:
Q  48 ctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaa 111  Q
    |||||||||||| |   |||||| ||||||||||||||| | |||||||| |||||||||||||    
T  9049 ctcgctaggcgactgaatctgctcgctatggcgagctgcaaggtgcaacttgcgaggcggggaa 8986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 15488 - 15389
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    ||||| |||||| ||||| || ||||| ||   ||||||||||||  ||||||||||||||   |||||| ||||||| ||||||| | |||||||||||    
T  15488 caacttaaaagttaaaattacgaaatcatgatgcctctctggtcacactcgctaggcgagtgaatctgctcgctatggggagctgcaaggtgcaactcgc 15389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 179112 - 179217
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 100  Q
    |||||||||||||||||| |  |||||  |  | ||| |||||  |||||||||||||||| |   || | ||| |||||||||||| ||||||||||||    
T  179112 caactcaaaagtcaaaattatgaaatcaaggttgctcactggttgagctcgctaggcgagtacaattgttcgctgtggcgagctgcgtcgtgcaactcgc 179211  T
Q  101 gaggcg 106  Q
    ||||||    
T  179212 gaggcg 179217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 106
Target Start/End: Complemental strand, 21389 - 21359
Alignment:
Q  76 tggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    |||||||||||||||||||||||||||||||    
T  21389 tggcgagctgcgacgtgcaactcgcgaggcg 21359  T

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Target: scaffold0210; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 106
Target Start/End: Complemental strand, 29281 - 29251
Alignment:
Q  76 tggcgagctgcgacgtgcaactcgcgaggcg 106  Q
    |||||||||||||||||||||||||||||||    
T  29281 tggcgagctgcgacgtgcaactcgcgaggcg 29251  T

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Target: scaffold0174 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 18112 - 18006
Alignment:
Q  1 caactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 99  Q
    |||||| ||||||||||| | | |||  | ||| ||||||||||| |||||||| |||||||  |  || | ||| |||| |||||||||||||||||||    
T  18112 caactctaaagtcaaaattatagaattctacatgctctctggtcatgctcgctatggcgagtaacattgttcgctgtggcaagctgcgacgtgcaactcg 18013  T
Q  100 cgaggcg 106  Q
    |||||||    
T  18012 cgaggcg 18006  T

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Target: scaffold0040 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 103178 - 103136
Alignment:
Q  66 ctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 108  Q
    ||||| ||||||||||||||| | |||||||||||||||||||    
T  103178 ctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 103136  T

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Target: scaffold0530 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 111
Target Start/End: Complemental strand, 653 - 576
Alignment:
Q  34 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaa 111  Q
    ||||||||||||  |||||||||||| |   |||| | ||||||||||| ||| | |||||||||| |||||||||||    
T  653 cctctctggtcacactcgctaggcgattgaatctggtcgctatggcgagttgcaaggtgcaactcgtgaggcggggaa 576  T

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Target: scaffold0357 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 3264 - 3335
Alignment:
Q  33 tcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 104  Q
    ||||| |||||||| ||||||| |||||||   |||||| ||||||||||||||| || ||||||||||||||    
T  3264 tcctcactggtcaaactcgctatggcgagtga-tctgctcgctatggcgagctgcaacatgcaactcgcgagg 3335  T

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