View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1122_low_12 (Length: 208)
Name: NF1122_low_12
Description: NF1122
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1122_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 39058306 - 39058162
Alignment:
| Q |
18 |
catcatcttctttatatgatgtatcttctgttcttgtaaggagttactctccattgcttttgtcagtaaaattcaatggctaacaaacaacatacccctc |
117 |
Q |
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| T |
39058306 |
catcctcttctttatatgatgtatcttctgttcttgtaaggagttactctccattgcttttgtcagtaaaattcaatggctaacaaacaacatacccctc |
39058207 |
T |
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| Q |
118 |
ttagaataaatgaaatatttgtcaaacatgaataatagctacaac |
162 |
Q |
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| T |
39058206 |
ttagaataaatgaaatatttgtcaatcatgaataatagctacaac |
39058162 |
T |
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