View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1122_low_7 (Length: 315)
Name: NF1122_low_7
Description: NF1122
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1122_low_7 |
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Alignment Details
Target: chr1 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 30 - 302
Target Start/End: Complemental strand, 6992455 - 6992183
Alignment:
| Q |
30 |
ttattgtgctactggtactggtcctcatattggttctgaaacaatgtcataagagtaaaaatttggaaattgaaagagggaccacaaatggggggcctgt |
129 |
Q |
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| T |
6992455 |
ttattgtgctactggtactggtcctcatattggttctgaaacaatgtcataagagtaaaaatttggaaattgaaagagggaccacaaatggggggcctgt |
6992356 |
T |
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| Q |
130 |
tacagaaggggaaagtcctatacctaaggatcccgtttttgtaactgccgtgggagagtcatttacttttgaacaaattctccacatgactggcaatttt |
229 |
Q |
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| T |
6992355 |
tacagaaggggaaagtcctatacctaaggatcccgtttttgtaactgccgtgggagagtcatttacttttgaacaaattctccatatgactggcaatttt |
6992256 |
T |
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| Q |
230 |
gacgaagcaaacttaataaagcatggtcattctggagactttttctggggagttttggacaatggagcaacag |
302 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6992255 |
gacgaagcaaacttaataaagcatggtcattctggagactttttctggggagttttggacaatggagcaacag |
6992183 |
T |
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