View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11231_high_3 (Length: 270)
Name: NF11231_high_3
Description: NF11231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11231_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 32121892 - 32121669
Alignment:
| Q |
1 |
catttctttactgtcattctttcacatgataattttcagaagataatcatatatagtgcttgttttgagctgaaagacagctccaaacgatatattctgc |
100 |
Q |
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| T |
32121892 |
catttctttactgtcattctttcacatgataattttcagaagataatcatatatagtgcttgttttgagctgaaagacagctccaaacgatatattctgc |
32121793 |
T |
|
| Q |
101 |
atagtttctacccctcgcccctgcagctatatctggttctagatgttatatattttaaatgtctccttaacaatacaaattgataagggattttcaattt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32121792 |
atagtttctacccctcgcccctgcagctatatctggttctagatgttatatattttaaatgtctccttaacaatacaaattgataagggattttcaattt |
32121693 |
T |
|
| Q |
201 |
tacttaaagctaatatatattttg |
224 |
Q |
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|||||||| ||||||||||||||| |
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| T |
32121692 |
tacttaaatctaatatatattttg |
32121669 |
T |
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