View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11231_low_1 (Length: 424)

Name: NF11231_low_1
Description: NF11231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11231_low_1
NF11231_low_1
[»] chr8 (33 HSPs)
chr8 (1-424)||(6536179-6536604)
chr8 (1-65)||(18540316-18540382)
chr8 (7-65)||(2203510-2203570)
chr8 (5-65)||(3624598-3624660)
chr8 (1-65)||(35690056-35690122)
chr8 (5-63)||(968382-968442)
chr8 (7-65)||(16852358-16852418)
chr8 (7-65)||(19703485-19703545)
chr8 (1-63)||(23361641-23361705)
chr8 (1-65)||(8794337-8794403)
chr8 (1-59)||(33017238-33017298)
chr8 (4-65)||(11819794-11819857)
chr8 (1-65)||(12988446-12988512)
chr8 (7-63)||(28783080-28783138)
chr8 (4-64)||(30483879-30483941)
chr8 (1-64)||(13129687-13129752)
chr8 (8-63)||(26688885-26688942)
chr8 (4-63)||(27750750-27750811)
chr8 (7-57)||(3524399-3524451)
chr8 (9-63)||(29858049-29858105)
chr8 (15-65)||(44780120-44780172)
chr8 (1-32)||(42740547-42740578)
chr8 (18-65)||(5264562-5264611)
chr8 (14-65)||(23874387-23874440)
chr8 (5-65)||(43292432-43292489)
chr8 (1-38)||(3174797-3174834)
chr8 (7-65)||(18546360-18546420)
chr8 (5-63)||(22193360-22193420)
chr8 (5-62)||(4435996-4436055)
chr8 (1-65)||(20994449-20994516)
chr8 (10-63)||(25389476-25389531)
chr8 (5-63)||(34986122-34986177)
chr8 (4-65)||(43594313-43594376)
[»] chr7 (49 HSPs)
chr7 (1-65)||(26459402-26459468)
chr7 (4-65)||(39631862-39631925)
chr7 (4-65)||(43215202-43215265)
chr7 (1-65)||(33222388-33222454)
chr7 (1-64)||(7721388-7721453)
chr7 (6-64)||(30442507-30442567)
chr7 (7-63)||(22760883-22760941)
chr7 (1-39)||(2882996-2883034)
chr7 (1-63)||(30579355-30579419)
chr7 (4-65)||(9608624-9608687)
chr7 (4-65)||(9836196-9836259)
chr7 (4-65)||(23552136-23552199)
chr7 (5-65)||(17041008-17041070)
chr7 (7-63)||(19553474-19553531)
chr7 (1-65)||(25956285-25956350)
chr7 (8-63)||(41487382-41487436)
chr7 (7-63)||(43590927-43590985)
chr7 (2-65)||(2962477-2962542)
chr7 (1-39)||(21558174-21558212)
chr7 (3-65)||(11700183-11700247)
chr7 (7-61)||(20335829-20335885)
chr7 (7-65)||(21877826-21877886)
chr7 (19-65)||(25021345-25021393)
chr7 (14-63)||(7801200-7801251)
chr7 (16-65)||(42836008-42836059)
chr7 (15-63)||(5579240-5579290)
chr7 (1-65)||(7744104-7744170)
chr7 (7-63)||(11720958-11721016)
chr7 (1-65)||(25655220-25655286)
chr7 (1-65)||(33869437-33869503)
chr7 (1-39)||(15137599-15137637)
chr7 (11-62)||(28236583-28236636)
chr7 (5-59)||(279950-280005)
chr7 (7-65)||(7499922-7499982)
chr7 (3-36)||(13106776-13106809)
chr7 (5-63)||(14058273-14058333)
chr7 (5-63)||(14368301-14368361)
chr7 (7-61)||(15905672-15905727)
chr7 (3-65)||(17113813-17113877)
chr7 (1-38)||(27376749-27376786)
chr7 (1-63)||(29785293-29785357)
chr7 (3-65)||(41519258-41519322)
chr7 (7-65)||(42711976-42712036)
chr7 (5-62)||(2446329-2446388)
chr7 (5-62)||(5668567-5668626)
chr7 (4-65)||(18363714-18363777)
chr7 (1-62)||(29385735-29385798)
chr7 (7-39)||(29916806-29916838)
chr7 (14-63)||(48771958-48772009)
[»] chr4 (41 HSPs)
chr4 (1-65)||(37109343-37109409)
chr4 (1-89)||(2622387-2622475)
chr4 (1-65)||(15180759-15180822)
chr4 (4-65)||(23377974-23378037)
chr4 (1-90)||(37274451-37274537)
chr4 (1-61)||(7949446-7949508)
chr4 (1-65)||(16581711-16581777)
chr4 (1-65)||(38869786-38869852)
chr4 (4-65)||(7292793-7292856)
chr4 (1-65)||(31759650-31759716)
chr4 (5-63)||(49576890-49576950)
chr4 (1-65)||(1730481-1730547)
chr4 (1-65)||(19680780-19680846)
chr4 (7-63)||(55427198-55427256)
chr4 (3-65)||(10047998-10048062)
chr4 (4-65)||(8030199-8030262)
chr4 (14-63)||(24827845-24827896)
chr4 (5-65)||(2185028-2185090)
chr4 (1-65)||(4249195-4249261)
chr4 (5-65)||(13015445-13015507)
chr4 (7-63)||(19238575-19238633)
chr4 (7-59)||(37720212-37720266)
chr4 (8-59)||(4483300-4483353)
chr4 (7-62)||(39509091-39509148)
chr4 (7-90)||(46295096-46295175)
chr4 (8-55)||(46329192-46329241)
chr4 (1-39)||(51622531-51622569)
chr4 (1-39)||(51969063-51969101)
chr4 (2-61)||(53496899-53496960)
chr4 (5-63)||(24234665-24234725)
chr4 (7-65)||(30938217-30938277)
chr4 (7-57)||(32992638-32992690)
chr4 (3-65)||(46545729-46545793)
chr4 (4-65)||(7539608-7539671)
chr4 (2-63)||(11592146-11592209)
chr4 (8-36)||(11842919-11842947)
chr4 (4-61)||(13265103-13265162)
chr4 (8-65)||(13901760-13901819)
chr4 (14-63)||(17618301-17618352)
chr4 (1-62)||(33632128-33632191)
chr4 (1-65)||(37443720-37443783)
[»] chr1 (34 HSPs)
chr1 (1-65)||(9165187-9165253)
chr1 (2-64)||(10526842-10526906)
chr1 (1-65)||(8177174-8177240)
chr1 (1-65)||(33700765-33700831)
chr1 (3-65)||(36371488-36371552)
chr1 (1-65)||(2799880-2799946)
chr1 (1-65)||(6650613-6650679)
chr1 (1-65)||(15786312-15786378)
chr1 (7-63)||(52116779-52116837)
chr1 (3-65)||(4566566-4566630)
chr1 (3-65)||(21547474-21547538)
chr1 (4-65)||(6122812-6122875)
chr1 (1-65)||(17745248-17745314)
chr1 (1-65)||(51703797-51703863)
chr1 (1-65)||(52336766-52336832)
chr1 (1-39)||(3265970-3266008)
chr1 (8-63)||(40257419-40257476)
chr1 (1-47)||(1247149-1247197)
chr1 (4-65)||(11063574-11063637)
chr1 (6-63)||(31383795-31383854)
chr1 (5-90)||(50901580-50901662)
chr1 (7-63)||(16169976-16170034)
chr1 (7-63)||(19528325-19528383)
chr1 (8-63)||(21694466-21694520)
chr1 (5-36)||(30203223-30203254)
chr1 (21-65)||(31794276-31794322)
chr1 (1-39)||(8904460-8904498)
chr1 (5-52)||(10150865-10150914)
chr1 (7-62)||(30689033-30689090)
chr1 (5-39)||(51814540-51814574)
chr1 (5-63)||(9643805-9643865)
chr1 (1-34)||(29753700-29753733)
chr1 (23-65)||(44046162-44046206)
chr1 (1-89)||(31049609-31049697)
[»] scaffold0180 (1 HSPs)
scaffold0180 (1-65)||(19954-20020)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-65)||(94963-95029)
[»] chr3 (35 HSPs)
chr3 (1-65)||(53412963-53413029)
chr3 (1-92)||(10445131-10445219)
chr3 (5-65)||(14186666-14186727)
chr3 (4-65)||(32651433-32651496)
chr3 (1-65)||(4222159-4222225)
chr3 (1-65)||(16354884-16354950)
chr3 (1-65)||(27093353-27093419)
chr3 (1-65)||(30311324-30311390)
chr3 (3-65)||(46518646-46518710)
chr3 (1-62)||(15048053-15048116)
chr3 (7-63)||(17035008-17035064)
chr3 (1-36)||(34062540-34062575)
chr3 (4-64)||(37788460-37788522)
chr3 (1-60)||(28531050-28531111)
chr3 (1-64)||(28703396-28703461)
chr3 (5-63)||(21960571-21960631)
chr3 (7-57)||(54990728-54990780)
chr3 (4-65)||(8075122-8075185)
chr3 (14-63)||(17554791-17554842)
chr3 (5-62)||(51903874-51903933)
chr3 (4-39)||(13808880-13808915)
chr3 (7-63)||(14339630-14339688)
chr3 (3-59)||(27259185-27259243)
chr3 (1-57)||(53863860-53863917)
chr3 (4-63)||(2667882-2667943)
chr3 (4-63)||(30510194-30510255)
chr3 (4-63)||(36720401-36720462)
chr3 (5-63)||(4844507-4844567)
chr3 (5-63)||(4870203-4870263)
chr3 (15-65)||(7975436-7975488)
chr3 (5-63)||(10499105-10499165)
chr3 (10-39)||(24353380-24353409)
chr3 (3-53)||(39253727-39253779)
chr3 (7-65)||(47454615-47454675)
chr3 (11-39)||(49452919-49452947)
[»] chr2 (28 HSPs)
chr2 (6-65)||(42327392-42327453)
chr2 (7-65)||(29503289-29503349)
chr2 (1-65)||(42922432-42922499)
chr2 (1-65)||(11251105-11251171)
chr2 (7-63)||(37480095-37480153)
chr2 (1-65)||(40416382-40416448)
chr2 (5-59)||(4262298-4262354)
chr2 (1-62)||(19244130-19244193)
chr2 (7-63)||(22382237-22382293)
chr2 (7-63)||(22914263-22914319)
chr2 (19-63)||(22999242-22999286)
chr2 (1-65)||(16918570-16918636)
chr2 (7-63)||(23052521-23052579)
chr2 (1-65)||(30410541-30410607)
chr2 (7-63)||(39715012-39715070)
chr2 (5-65)||(42602572-42602634)
chr2 (1-39)||(33839252-33839290)
chr2 (9-63)||(12086129-12086185)
chr2 (4-65)||(19322786-19322849)
chr2 (4-65)||(21195671-21195734)
chr2 (1-65)||(1729834-1729900)
chr2 (9-65)||(12994376-12994434)
chr2 (7-63)||(21213789-21213847)
chr2 (14-65)||(28846709-28846762)
chr2 (5-63)||(7799031-7799091)
chr2 (3-65)||(13803513-13803577)
chr2 (4-65)||(11062378-11062441)
chr2 (14-63)||(37755976-37756027)
[»] chr5 (29 HSPs)
chr5 (7-65)||(30883196-30883256)
chr5 (1-65)||(7918461-7918527)
chr5 (6-65)||(17155842-17155901)
chr5 (1-65)||(25627075-25627141)
chr5 (1-65)||(34984824-34984890)
chr5 (1-64)||(14285180-14285245)
chr5 (14-65)||(5390857-5390908)
chr5 (7-63)||(16457830-16457888)
chr5 (3-63)||(16773827-16773889)
chr5 (1-65)||(18595993-18596059)
chr5 (11-65)||(892476-892532)
chr5 (3-65)||(43442214-43442278)
chr5 (1-65)||(29075799-29075865)
chr5 (1-65)||(37258358-37258424)
chr5 (1-63)||(21589308-21589372)
chr5 (5-63)||(29692382-29692442)
chr5 (1-89)||(30700610-30700692)
chr5 (14-65)||(16436636-16436688)
chr5 (4-65)||(21549132-21549195)
chr5 (4-65)||(26078046-26078109)
chr5 (4-90)||(43230769-43230853)
chr5 (4-59)||(25979194-25979251)
chr5 (15-65)||(87429-87481)
chr5 (15-65)||(17028270-17028322)
chr5 (3-65)||(22737100-22737164)
chr5 (9-63)||(30109308-30109364)
chr5 (7-56)||(84851-84902)
chr5 (15-60)||(4793094-4793141)
chr5 (1-63)||(18973985-18974044)
[»] scaffold0299 (1 HSPs)
scaffold0299 (1-63)||(11548-11612)
[»] scaffold0258 (1 HSPs)
scaffold0258 (5-63)||(15319-15379)
[»] chr6 (20 HSPs)
chr6 (5-63)||(33549124-33549184)
chr6 (4-65)||(12188298-12188361)
chr6 (5-63)||(6385882-6385942)
chr6 (9-63)||(10338174-10338230)
chr6 (5-65)||(24507532-24507594)
chr6 (15-63)||(31622997-31623047)
chr6 (1-60)||(14278103-14278164)
chr6 (1-39)||(15951294-15951332)
chr6 (3-65)||(3779357-3779421)
chr6 (4-65)||(20213059-20213122)
chr6 (4-90)||(20863366-20863456)
chr6 (4-65)||(22107082-22107145)
chr6 (7-38)||(24334023-24334054)
chr6 (1-65)||(28363955-28364021)
chr6 (1-60)||(11306166-11306227)
chr6 (14-53)||(23910116-23910157)
chr6 (5-63)||(12234503-12234563)
chr6 (6-63)||(12216764-12216823)
chr6 (4-65)||(13330105-13330168)
chr6 (2-63)||(34444823-34444886)
[»] scaffold0194 (1 HSPs)
scaffold0194 (5-63)||(13042-13102)
[»] scaffold0118 (1 HSPs)
scaffold0118 (3-65)||(41627-41691)
[»] scaffold0337 (1 HSPs)
scaffold0337 (5-65)||(1771-1833)
[»] scaffold0126 (1 HSPs)
scaffold0126 (1-65)||(25339-25405)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-65)||(12207-12273)
[»] scaffold1367 (1 HSPs)
scaffold1367 (4-63)||(835-896)
[»] scaffold0238 (1 HSPs)
scaffold0238 (1-38)||(2703-2740)
[»] scaffold0291 (1 HSPs)
scaffold0291 (7-63)||(2468-2526)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-65)||(18317-18383)
[»] scaffold0122 (1 HSPs)
scaffold0122 (14-65)||(6924-6977)


Alignment Details
Target: chr8 (Bit Score: 407; Significance: 0; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 407; E-Value: 0
Query Start/End: Original strand, 1 - 424
Target Start/End: Complemental strand, 6536604 - 6536179
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccactaccactaggccaacctaagtgggttattgatggc 98  Q
    |||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6536604 accagagagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccactaccactaggccaacctaagtgggttattgatggc 6536505  T
Q  99 ccgtaataattaaaataaattggtattctgaatttgaatccaaattacatgatccagtaatcaacagaacaactaatgaatatgacaaaagaaagaaaaa 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6536504 ccgtaataattaaaataaattggtattctgaatttgaatccaaattacatgatccagtaatcaacagaacaactaatgaatatgacaaaagaaagaaaaa 6536405  T
Q  199 tgaaataatatggagaatctttatgcgaatttcacaacaattggattgatacaatttgaactattgcatgcaaagataaactttagtcaggaagtatgca 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6536404 tgaaataatatggagaatctttatgcgaatttcacaacaattggattgatacaatttgaactattgcatgcaaagataaactttagtcaggaagtatgca 6536305  T
Q  299 cttcgcagtgcagctaattcaaggaaagcatatacaaagtgaccattgttttcctccaaaattattgattactctgacaaatcaataatcaagaagcaat 398  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6536304 cttcgcagtgcagctaattcaaggaaagcatatacaaagtgaccattgttttcctccaaaattattgattactctgacaaatcaataatcaagaagcaat 6536205  T
Q  399 atagtggggaaaagcagcggcagctc 424  Q
    |||||||||||||||||| |||||||    
T  6536204 atagtggggaaaagcagcagcagctc 6536179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18540382 - 18540316
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  18540382 accagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccacta 18540316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 2203570 - 2203510
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    ||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  2203570 gagaattgaccctgagaccttgaggaggagcacactcccaggtcccaagccaataccacta 2203510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 3624660 - 3624598
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    |||||||| |||||||||||||||| |||||||||  ||||||||||||||||||||||||||    
T  3624660 gagagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccacta 3624598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 35690056 - 35690122
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagc--actcccaggtcccaagccaataccacta 65  Q
    |||||||||||| ||||||||||||||||||||||||  || ||||| |||||||||||||||||||    
T  35690056 accagagagaatcgaacctgagaccttgaggaggagcaaacacccagatcccaagccaataccacta 35690122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 968442 - 968382
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccac 63  Q
    |||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  968442 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccac 968382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 16852418 - 16852358
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    |||||| ||||||||||||| ||||||||||||  ||||||||||||||||||||||||||    
T  16852418 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccacta 16852358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 19703485 - 19703545
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||| |||||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  19703485 gagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccacta 19703545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 23361641 - 23361705
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||  ||||||| |||||||||    
T  23361641 accagagagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaataccac 23361705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 8794337 - 8794403
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||||||| |||||||||||| ||||||||||  |||| |||||| |||||||||||||||||    
T  8794337 accagagagaatcgaacctgagaccctgaggaggagcacacttccaggttccaagccaataccacta 8794403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 33017298 - 33017238
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaata 59  Q
    |||||||||||| |||||||||||||||||||||||  |||| |||||| |||||||||||    
T  33017298 accagagagaatcgaacctgagaccttgaggaggagcacacttccaggttccaagccaata 33017238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 11819857 - 11819794
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||| |||| |||||||||||||||||||||||  |||||||| |||||||||| |||||||||    
T  11819857 agagtgaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccacta 11819794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 12988512 - 12988446
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    ||||||||| || |||||||| ||||||||||||||  |||| |||||| |||||||||||||||||    
T  12988512 accagagaggatcgaacctgaaaccttgaggaggagcacacttccaggttccaagccaataccacta 12988446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 28783138 - 28783080
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||||| |||| ||||||||||||||||||  |||||||||||| ||||||||||||||    
T  28783138 gagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaataccac 28783080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 30483879 - 30483941
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccact 64  Q
    |||||||||||||||||||||  ||||||||||  ||||||||  ||||||||||||||||||    
T  30483879 agagagaattgaacctgagactctgaggaggagcacactcccatatcccaagccaataccact 30483941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13129752 - 13129687
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggagga--gcactcccaggtcccaagccaataccact 64  Q
    |||||||||||| |||||||| |||||||||||||  ||||||||| ||||||| ||||| |||||    
T  13129752 accagagagaatcgaacctgaaaccttgaggaggagcgcactcccaagtcccaaaccaatgccact 13129687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 26688942 - 26688885
Alignment:
Q  8 agaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||| ||||||||||||||||||||||||  |||||| |||||||||||||| |||||    
T  26688942 agaactgaacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccac 26688885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 27750811 - 27750750
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||| |||| |||||||||||||||||||||||  |||||||| |||||||||| |||||||    
T  27750811 agagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccac 27750750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 3524399 - 3524451
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaa 57  Q
    ||||||||||||| ||||||||||||||||  |||||| ||||||||||||||    
T  3524399 gagaattgaacctaagaccttgaggaggagcacactccaaggtcccaagccaa 3524451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 29858049 - 29858105
Alignment:
Q  9 gaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||| ||||||||||||| |||||||||  ||||||| |||||||||||||||||||    
T  29858049 gaatcgaacctgagacctcgaggaggagcacactccctggtcccaagccaataccac 29858105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 44780120 - 44780172
Alignment:
Q  15 aacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||| ||||||    
T  44780120 aacctgagaccttgaggaggagcacactcccaagtcccaagccaatgccacta 44780172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 42740578 - 42740547
Alignment:
Q  1 accagagagaattgaacctgagaccttgagga 32  Q
    ||||||||||||||||||||||||||||||||    
T  42740578 accagagagaattgaacctgagaccttgagga 42740547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 5264611 - 5264562
Alignment:
Q  18 ctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    ||||||||| ||||||||||||  |||||||| |||||||||||||||||    
T  5264611 ctgagacctcgaggaggagcacattcccaggttccaagccaataccacta 5264562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 23874387 - 23874440
Alignment:
Q  14 gaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    ||||||||||||| ||||||| |||   ||||||||||||||||||||||||||    
T  23874387 gaacctgagacctcgaggaggcgcagattcccaggtcccaagccaataccacta 23874440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 43292432 - 43292489
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggagcactcccaggtcccaagccaataccacta 65  Q
    ||||||||||||||||||| ||||||||| ||   || ||| |||||||||||||||||||    
T  43292432 gagagaattgaacctgagatcttgaggagaag---tctcagatcccaagccaataccacta 43292489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 3174797 - 3174834
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagca 38  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  3174797 accagagagaatcgaacctgagaccttgaggatgagca 3174834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 18546360 - 18546420
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggagca--ctcccaggtcccaagccaataccacta 65  Q
    |||||| ||||||||||||| |||||||||||  ||| ||||||||||  |||||||||||    
T  18546360 gagaatcgaacctgagacctcgaggaggagcatgctctcaggtcccaaatcaataccacta 18546420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 22193360 - 22193420
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||||||| |||||| ||||||||||||||||  |||||||||| |||||| ||| |||||    
T  22193360 gagagaatcgaacctaagaccttgaggaggagcacactcccaggccccaagtcaacaccac 22193420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 4436055 - 4435996
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggagca--ctcccaggtcccaagccaatacca 62  Q
    |||||||| ||  |||||||||||||||||||||  |||||| ||| |||||||||||||    
T  4436055 gagagaatcgagtctgagaccttgaggaggagcactctcccatgtctcaagccaatacca 4435996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 20994449 - 20994516
Alignment:
Q  1 accagagagaattgaacctgagaccttgagg-aggagcac--tcccaggtcccaagccaataccacta 65  Q
    |||||||| ||| || |||||||| |||||| ||||||||  |||||||||||||| |||||||||||    
T  20994449 accagagataatcgatcctgagactttgagggaggagcacactcccaggtcccaagtcaataccacta 20994516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 25389531 - 25389476
Alignment:
Q  10 aattgaacctgagaccttgaggaggagca--ctcccaggtcccaagccaataccac 63  Q
    |||||||||| ||| ||||| ||||||||  |||| ||||||||||||||||||||    
T  25389531 aattgaacctaagatcttgaagaggagcatactcctaggtcccaagccaataccac 25389476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 34986177 - 34986122
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggagcactcccaggtcccaagccaataccac 63  Q
    ||||||||||||||||||||||     ||||| ||||||||||||||| ||||||||||    
T  34986177 gagagaattgaacctgagacct---caaggagtactcccaggtcccaaaccaataccac 34986122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 43594313 - 43594376
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    ||||||||| |||||||||||||||||||||| |||  ||| || ||| ||||||||| |||||    
T  43594313 agagagaatcgaacctgagaccttgaggaggaacacattcctagatcctaagccaatatcacta 43594376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 1e-20; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 26459402 - 26459468
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  26459402 accagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccacta 26459468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 39631925 - 39631862
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggagc--actcccaggtcccaagccaataccacta 65  Q
    ||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  39631925 agagagaatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccacta 39631862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 43215265 - 43215202
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    ||||||||| |||||||||||||||||||||||  |||||| ||||||||||||||||||||||    
T  43215265 agagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccacta 43215202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 33222454 - 33222388
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||||||| ||||||||||||||||||| |||  |||| ||||||||||||||||||||||||    
T  33222454 accagagagaatcgaacctgagaccttgaggatgagtacacttccaggtcccaagccaataccacta 33222388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 7721453 - 7721388
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccact 64  Q
    |||||||||||| |||| ||||||||||||||||||  |||||||||||||||| |||||||||||    
T  7721453 accagagagaatcgaacatgagaccttgaggaggagtacactcccaggtcccaaaccaataccact 7721388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 30442567 - 30442507
Alignment:
Q  6 agagaattgaacctgagaccttgaggaggagca--ctcccaggtcccaagccaataccact 64  Q
    ||||||| |||||| ||||||||||||||||||  ||||||||||||||||||||||||||    
T  30442567 agagaatcgaacctcagaccttgaggaggagcaaactcccaggtcccaagccaataccact 30442507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 22760941 - 22760883
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||||| |||||||||    
T  22760941 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccac 22760883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 2883034 - 2882996
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagcac 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2883034 accagagagaattgaacctgagaccttgaggaggagcac 2882996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 30579419 - 30579355
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||||||| ||| ||||||||||||||||||||| |  |||||||||||| ||||||||||||||    
T  30579419 accagagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccac 30579355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 9608624 - 9608687
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    ||||||||| |||||||||| ||||||||||||  ||||||||| ||||||||| |||||||||    
T  9608624 agagagaatcgaacctgagatcttgaggaggaggacactcccagatcccaagcctataccacta 9608687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 9836196 - 9836259
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    ||||||||| |||||||||| ||||||||||||  ||||||||| ||||||||| |||||||||    
T  9836196 agagagaatcgaacctgagatcttgaggaggaggacactcccagatcccaagcctataccacta 9836259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 23552199 - 23552136
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    ||||||||| |||| ||||||||||||||||||  ||||||||||||||||| ||||| |||||    
T  23552199 agagagaatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaatagcacta 23552136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 17041008 - 17041070
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||| |||||||||||||||||||||||  |||| |||| |||||||||||| ||||||    
T  17041008 gagagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaatgccacta 17041070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 19553531 - 19553474
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    ||||||||||||| ||||||||||||||||  ||||||||||| |||||||||||||||    
T  19553531 gagaattgaacctaagaccttgaggaggagcacactcccaggt-ccaagccaataccac 19553474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 25956285 - 25956350
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    ||||| ||||||||||||| |||||||||| ||||||||  ||| ||||||||||||||||||||||    
T  25956285 accagggagaattgaacctaagaccttgag-aggagcacactccaaggtcccaagccaataccacta 25956350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 41487436 - 41487382
Alignment:
Q  8 agaattgaacctgagaccttgaggaggagcactcccaggtcccaagccaataccac 63  Q
    ||||| |||||||||||||||||||| | |||||||| ||||||||||||||||||    
T  41487436 agaatcgaacctgagaccttgaggagaa-cactcccaagtcccaagccaataccac 41487382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 43590985 - 43590927
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||||| ||||||||||| |||||||||||  |||||||| ||||||||||||||||||    
T  43590985 gagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccac 43590927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 2962542 - 2962477
Alignment:
Q  2 ccagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    ||||||||||| |||||||||| ||||||||||||  ||||| ||||| |||| ||||||||||||    
T  2962542 ccagagagaatcgaacctgagatcttgaggaggagcacactcacaggttccaaaccaataccacta 2962477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21558212 - 21558174
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagcac 39  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  21558212 accagagagaatcgaacctgagaccttgaggaggagcac 21558174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 11700247 - 11700183
Alignment:
Q  3 cagagagaattgaacctgagaccttgaggaggagc--actcccaggtcccaagccaataccacta 65  Q
    |||||||||| ||||||||||||||||||||||||  |||| || ||| ||||||||| ||||||    
T  11700247 cagagagaatcgaacctgagaccttgaggaggagcaaactctcaagtctcaagccaatgccacta 11700183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 20335829 - 20335885
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaatacc 61  Q
    |||||| ||||||||||||| |||||||||  |||||||| ||||||||||||||||    
T  20335829 gagaatcgaacctgagacctcgaggaggagcacactcccaagtcccaagccaatacc 20335885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 21877886 - 21877826
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    |||||| |||| ||||||||| |||||||||||  |||||||||||||| |||||||||||    
T  21877886 gagaatcgaacgtgagaccttaaggaggagcaccctcccaggtcccaagtcaataccacta 21877826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 25021345 - 25021393
Alignment:
Q  19 tgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    |||||| ||||||||||||||  ||||||||||||||||||||||||||    
T  25021345 tgagactttgaggaggagcacactcccaggtcccaagccaataccacta 25021393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 7801251 - 7801200
Alignment:
Q  14 gaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccac 63  Q
    |||||||||||||||| |||||||||  |||||||||||||| |||||||||    
T  7801251 gaacctgagaccttgaagaggagcacactcccaggtcccaagtcaataccac 7801200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 42836008 - 42836059
Alignment:
Q  16 acctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    ||||||| ||||||||| ||||||  ||||||||||||||||||||||||||    
T  42836008 acctgaggccttgaggaagagcacactcccaggtcccaagccaataccacta 42836059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 5579240 - 5579290
Alignment:
Q  15 aacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    ||||||||||||||||||||||  |||||| |||||||||||||| |||||    
T  5579240 aacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccac 5579290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 7744104 - 7744170
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagc--actcccaggtcccaagccaataccacta 65  Q
    ||||||||||||  |||||||||||||||||||||||  | |||||| ||| ||||| |||||||||    
T  7744104 accagagagaatcaaacctgagaccttgaggaggagcatagtcccagatcctaagcctataccacta 7744170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 11720958 - 11721016
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccac 63  Q
    |||||| ||| |||| ||||| |||||||||||  ||||||||||||||||||||||||    
T  11720958 gagaatcgaatctgataccttaaggaggagcacattcccaggtcccaagccaataccac 11721016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 25655220 - 25655286
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggagga--gcactcccaggtcccaagccaataccacta 65  Q
    |||||||||||| |||||||| |||||||||||||   ||||| ||| ||||||| |||||||||||    
T  25655220 accagagagaatcgaacctgaaaccttgaggaggatcacactcacagatcccaagtcaataccacta 25655286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 33869437 - 33869503
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||||||| ||||| ||||||||||| |||||  |||| ||||||| ||||||||||| ||||    
T  33869437 accagagagaatcgaaccagagaccttgagaaggagcacacttccaggtctcaagccaatactacta 33869503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 15137637 - 15137599
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagcac 39  Q
    ||||||||||||  |||||||||||||||||||||||||    
T  15137637 accagagagaatctaacctgagaccttgaggaggagcac 15137599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 28236583 - 28236636
Alignment:
Q  11 attgaacctgagaccttgaggaggagc--actcccaggtcccaagccaatacca 62  Q
    |||||||  ||||||| ||||||||||  |||||||||||||||||||||||||    
T  28236583 attgaactagagacctcgaggaggagcgcactcccaggtcccaagccaatacca 28236636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 279950 - 280005
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaata 59  Q
    ||||||||||||||||||||||| ||||||||  ||||||||  |||||||||||||    
T  279950 gagagaattgaacctgagaccttaaggaggagtacactccca-atcccaagccaata 280005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 7499922 - 7499982
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggagc--actcccaggtcccaagccaataccacta 65  Q
    |||||| ||||||||||||| || |||||||  |||| ||||||||||||||||| |||||    
T  7499922 gagaatcgaacctgagacctcgaagaggagcaaactctcaggtcccaagccaatatcacta 7499982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 13106776 - 13106809
Alignment:
Q  3 cagagagaattgaacctgagaccttgaggaggag 36  Q
    |||||||||| |||||||||||||||||||||||    
T  13106776 cagagagaatcgaacctgagaccttgaggaggag 13106809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 14058333 - 14058273
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||||||| ||||||||||||||||||| |||  ||||| ||||| ||||| |||||||||    
T  14058333 gagagaatcgaacctgagaccttgaggatgagcacactctcaggttccaagacaataccac 14058273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 14368361 - 14368301
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||||||| ||||||||||||||||||| |||  ||||| ||||| ||||| |||||||||    
T  14368361 gagagaatcgaacctgagaccttgaggatgagcacactctcaggttccaagacaataccac 14368301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 15905672 - 15905727
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaatacc 61  Q
    |||||| |||||||||||||  |||||||||||  ||||||||||||||||||||||    
T  15905672 gagaatcgaacctgagaccta-aggaggagcacactcccaggtcccaagccaatacc 15905727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 17113877 - 17113813
Alignment:
Q  3 cagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||||| |||| ||||||||||||||| ||  ||||||||||| | |||||||||| ||||    
T  17113877 cagagagaatcgaacttgagaccttgaggagaagcacactcccaggttctaagccaatacaacta 17113813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 27376749 - 27376786
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagca 38  Q
    |||||||||||||||||| || ||||||||||||||||    
T  27376749 accagagagaattgaaccagaaaccttgaggaggagca 27376786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 29785293 - 29785357
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||||| ||||| |||| ||||||||||||||||||  |||| |||| ||||||||| |||||||    
T  29785293 accagaaagaatcgaacatgagaccttgaggaggagcacacttccagatcccaagcctataccac 29785357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 41519258 - 41519322
Alignment:
Q  3 cagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||||  |||||||||||||||||||||||  |||||| |  ||||||| |||||||||||    
T  41519258 cagagagaagcgaacctgagaccttgaggaggagcacactcctaaatcccaagtcaataccacta 41519322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 42712036 - 42711976
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||| |||| ||||||||||||||||||  |||||||| || |||||| ||||||||||    
T  42712036 gagaatcgaacatgagaccttgaggaggagcacactcccatgtaccaagctaataccacta 42711976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 2446388 - 2446329
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaatacca 62  Q
    |||||||| |||| ||||| || ||||||||||||  ||||| |||||||||||||||||    
T  2446388 gagagaatcgaacttgagatctcgaggaggagcacactcccaagtcccaagccaatacca 2446329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 5668567 - 5668626
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaatacca 62  Q
    |||||||| || |||||||||| |||||||||  |||| ||| |||||||||||||||||    
T  5668567 gagagaatcgatcctgagacctcgaggaggagcacacttccatgtcccaagccaatacca 5668626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 18363777 - 18363714
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||||  ||||||||||||||||||||||  ||||||||  || |||||| |||||||||    
T  18363777 agagagaatcaaacctgagaccttgaggaggagcacactcccaaatctcaagcctataccacta 18363714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29385735 - 29385798
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaatacca 62  Q
    |||| |||||||  ||||||||||||||||||||||  |||||| | |||||||||||| ||||    
T  29385735 accaaagagaatcaaacctgagaccttgaggaggagcacactccaaagtcccaagccaacacca 29385798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 29916806 - 29916838
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggagcac 39  Q
    |||||| ||||||||||||||||||||||||||    
T  29916806 gagaatcgaacctgagaccttgaggaggagcac 29916838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 48772009 - 48771958
Alignment:
Q  14 gaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccac 63  Q
    |||||||||||||  |||||||||||  |||||| |||||||||||||||||    
T  48772009 gaacctgagacctcaaggaggagcacactcccagatcccaagccaataccac 48771958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 1e-20; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 37109343 - 37109409
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  37109343 accagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccacta 37109409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 2622387 - 2622475
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccactaccactaggccaacctaagtgggtt 89  Q
    |||||||||||| ||||||||||| | |||||||||  ||||||||||||||||||||||   | |||||||||||||||| |||||||||    
T  2622387 accagagagaatcgaacctgagacatggaggaggagcacactcccaggtcccaagccaat--taataccactaggccaacccaagtgggtt 2622475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 15180822 - 15180759
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagcactcccaggtcccaagccaataccacta 65  Q
    |||||||||||| |||||| ||||||||||||| | |||||||||||||||||||||||||||||    
T  15180822 accagagagaatcgaacctaagaccttgaggagta-cactcccaggtcccaagccaataccacta 15180759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 23378037 - 23377974
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    ||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  23378037 agagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataacacta 23377974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 37274451 - 37274537
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccactaccactaggccaacctaagtgggtta 90  Q
    |||||||||||| |||||| ||||||||||||||||  ||||||||||||||||||||||     ||| |||||||||||| ||||||||||    
T  37274451 accagagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagccaat-----tacgactaggccaacccaagtgggtta 37274537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7949446 - 7949508
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaatacc 61  Q
    |||||||||||| |||||||||||||||||||||||  |||||| ||||||||||||||||||    
T  7949446 accagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaatacc 7949508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 16581777 - 16581711
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagc--actcccaggtcccaagccaataccacta 65  Q
    |||||||| ||| ||||||||||||||||||||||||  |||||||||| |||||||||||||||||    
T  16581777 accagagataatagaacctgagaccttgaggaggagcagactcccaggttccaagccaataccacta 16581711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 38869852 - 38869786
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    ||||||| |||| |||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  38869852 accagagggaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaataccacta 38869786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 7292793 - 7292856
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    ||||||||| ||||||||||| |||||||||||  ||||||||||| |||||||||||||||||    
T  7292793 agagagaatcgaacctgagactttgaggaggagcacactcccaggttccaagccaataccacta 7292856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 31759650 - 31759716
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||| ||||| ||| |||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  31759650 accagaaagaatcgaatctgagaccttgaggaggagcacactcccaagtcccaagccaataccacta 31759716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 49576890 - 49576950
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||||||| |||||||||||||||||||||||  |||||||| |||| |||||||||||||    
T  49576890 gagagaatcgaacctgagaccttgaggaggagcacactcccaagtccaaagccaataccac 49576950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 1730481 - 1730547
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    |||||||||||| ||| ||||||| |||| |||||||||  || |||||||||||||||||||||||    
T  1730481 accagagagaatagaatctgagactttgaagaggagcacactctcaggtcccaagccaataccacta 1730547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19680780 - 19680846
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||||||| |||||| |||||||||||| |||  |||||||| ||||||||| ||||||||||    
T  19680780 accagagagaatcgaacctaagaccttgaggaagagcacactcccaagtcccaagcgaataccacta 19680846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 55427198 - 55427256
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggagca--ctcccaggtcccaagccaataccac 63  Q
    |||||| ||||||||||||| ||| |||||||  |||||||||||||||||||||||||    
T  55427198 gagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaataccac 55427256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 10048062 - 10047998
Alignment:
Q  3 cagagagaattgaacctgagaccttgaggaggagc--actcccaggtcccaagccaataccacta 65  Q
    |||||||||| |||||||||||| |||| ||||||  ||||  ||||||||||||||||||||||    
T  10048062 cagagagaatcgaacctgagaccatgagaaggagcatactcttaggtcccaagccaataccacta 10047998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 8030199 - 8030262
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||| |||| |||| ||||||||||||||||||  |||||||| |||||||||| |||||||||    
T  8030199 agagggaatcgaacttgagaccttgaggaggagcacactcccaagtcccaagcctataccacta 8030262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 24827896 - 24827845
Alignment:
Q  14 gaacctgagaccttgaggaggagc--actcccaggtcccaagccaataccac 63  Q
    ||||||||||||| ||||||||||  |||||||||||||||| |||||||||    
T  24827896 gaacctgagacctcgaggaggagcgcactcccaggtcccaagtcaataccac 24827845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 2185028 - 2185090
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||| ||||||||||| ||||| |||||  ||||||||||| |||||||| ||||||||    
T  2185028 gagagaatcgaacctgagactttgagaaggagcacactcccaggttccaagccattaccacta 2185090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 4249261 - 4249195
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    ||||||||||||  ||||||||||||||||||||||  |||||| |  ||||||||| |||||||||    
T  4249261 accagagagaatcaaacctgagaccttgaggaggagcacactccaaaatcccaagcctataccacta 4249195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 13015507 - 13015445
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    |||||||| |||| |||||| | ||||||||||||  ||||| ||||||||||||||||||||    
T  13015507 gagagaatcgaacatgagacttcgaggaggagcacactcccaagtcccaagccaataccacta 13015445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 19238575 - 19238633
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccac 63  Q
    |||||| ||||| ||||||| ||||||||||||  ||||| ||||||||||||||||||    
T  19238575 gagaatcgaacccgagacctcgaggaggagcacactcccaagtcccaagccaataccac 19238633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 37720212 - 37720266
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaata 59  Q
    |||||| ||||||| ||||||||||||| ||||  ||||||||||||||||||||    
T  37720212 gagaatcgaacctgggaccttgaggaggggcacactcccaggtcccaagccaata 37720266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 4483300 - 4483353
Alignment:
Q  8 agaattgaacctgagaccttgaggaggagc--actcccaggtcccaagccaata 59  Q
    |||||||||||||||||||||||||||| |  |||| ||||||||||| |||||    
T  4483300 agaattgaacctgagaccttgaggaggatcagactctcaggtcccaagtcaata 4483353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 39509148 - 39509091
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaatacca 62  Q
    |||||| ||||||||||||| |||||||||  ||||||||| |||||||||| |||||    
T  39509148 gagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccattacca 39509091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 46295175 - 46295096
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccactaccactaggccaacctaagtgggtta 90  Q
    |||||| |||||||||||||||||||||||  |||||| | ||||||||||||   |||||||   || |||||||||||||||||    
T  46295175 gagaatcgaacctgagaccttgaggaggagcacactccaatgtcccaagccaa---cactacc---agaccaacctaagtgggtta 46295096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 46329241 - 46329192
Alignment:
Q  8 agaattgaacctgagaccttgaggaggag--cactcccaggtcccaagcc 55  Q
    ||||| |||||||| ||||||||||||||  |||||||||||||||||||    
T  46329241 agaatcgaacctgataccttgaggaggagcacactcccaggtcccaagcc 46329192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 51622569 - 51622531
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagcac 39  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  51622569 accagagagagtcgaacctgagaccttgaggaggagcac 51622531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 51969101 - 51969063
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagcac 39  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  51969101 accagagagaaatgaacctgaaaccttgaggaggagcac 51969063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 53496960 - 53496899
Alignment:
Q  2 ccagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaatacc 61  Q
    |||||||||||  || ||||||| |||||||||||  |||||||||||||||| ||||||||    
T  53496960 ccagagagaatcaaatctgagactttgaggaggagcacactcccaggtcccaaaccaatacc 53496899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 24234725 - 24234665
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccac 63  Q
    |||||||| |||| ||||||||| |||| ||||||  ||||| ||||||||||||||||||    
T  24234725 gagagaatcgaacttgagaccttcaggatgagcacactcccaagtcccaagccaataccac 24234665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 30938217 - 30938277
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||| ||||||||||||| |||||||||  |||||| || |||||| ||||||||||||    
T  30938217 gagaatcgaacctgagacctcgaggaggagcacactccaagatcccaaaccaataccacta 30938277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 32992690 - 32992638
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaa 57  Q
    |||||| |||| ||||||||||||||||||  |||||| ||||||||||||||    
T  32992690 gagaatcgaacttgagaccttgaggaggagcacactccaaggtcccaagccaa 32992638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 46545793 - 46545729
Alignment:
Q  3 cagagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    |||||| ||| ||| |||||| |||||||||||||||  || |||||| ||||||||||||||||    
T  46545793 cagagaaaatcgaatctgagatcttgaggaggagcacactctcaggtctcaagccaataccacta 46545729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 7539671 - 7539608
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggagc--actcccaggtcccaagccaataccacta 65  Q
    ||||||||| ||||||||||||||||| ||||||  |||||||| ||| ||  |||||||||||    
T  7539671 agagagaatcgaacctgagaccttgagaaggagcatactcccagatccaaaatcaataccacta 7539608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 11592146 - 11592209
Alignment:
Q  2 ccagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    ||||||| ||| |||||| |||||| |||||||||  ||||| ||||||||||| |||||||||    
T  11592146 ccagagataatcgaacctaagacctggaggaggagcacactctcaggtcccaaggcaataccac 11592209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 36
Target Start/End: Original strand, 11842919 - 11842947
Alignment:
Q  8 agaattgaacctgagaccttgaggaggag 36  Q
    |||||||||||||||||||||||||||||    
T  11842919 agaattgaacctgagaccttgaggaggag 11842947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 13265103 - 13265162
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaatacc 61  Q
    ||||||||| ||| |||| ||| | |||||||||||  ||||||||||||||||||||||    
T  13265103 agagagaatcgaatctgaaaccataaggaggagcacattcccaggtcccaagccaatacc 13265162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 13901819 - 13901760
Alignment:
Q  8 agaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    |||||||||| ||||||||  ||||||| |||  ||||||||| ||||||||||||||||    
T  13901819 agaattgaacttgagacctcaaggaggaacacactcccaggtctcaagccaataccacta 13901760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 17618352 - 17618301
Alignment:
Q  14 gaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccac 63  Q
    |||| |||||||| ||||||||||||  ||||||||| ||||||||||||||    
T  17618352 gaacatgagacctcgaggaggagcacactcccaggtctcaagccaataccac 17618301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 33632128 - 33632191
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagc--actcccaggtcccaagccaatacca 62  Q
    |||||||||||| || |||| ||||||||||||||||  |||||||  | ||||||||||||||    
T  33632128 accagagagaatcgatcctgggaccttgaggaggagcatactcccatattccaagccaatacca 33632191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 37443783 - 37443720
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagcactcccaggtcccaagccaataccacta 65  Q
    |||||||| ||| |||| ||| |||| |||||| | ||||||||| |||||||||||||||||||    
T  37443783 accagagataatcgaacatgaaacctcgaggagta-cactcccagatcccaagccaataccacta 37443720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 9165187 - 9165253
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  9165187 accagagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagccaataccacta 9165253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 10526906 - 10526842
Alignment:
Q  2 ccagagagaattgaacctgagaccttgaggaggagc--actcccaggtcccaagccaataccact 64  Q
    ||||||||||| ||| ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  10526906 ccagagagaatcgaatctgagaccttgaggaggagcaaactcccaggtcccaagccaataccact 10526842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 8177174 - 8177240
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||||||| |||||||| ||||||||||||||  ||||||||| |||||||||||||||||||    
T  8177174 accagagagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccacta 8177240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 33700765 - 33700831
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||||||| |||||||||||||||||||||||  ||||||||| | |||||||||||||||||    
T  33700765 accagagagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaataccacta 33700831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 36371552 - 36371488
Alignment:
Q  3 cagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||||| |||||| ||||||||||||||||  ||||||||||| |||||||||||||||||    
T  36371552 cagagagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaataccacta 36371488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 2799946 - 2799880
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||||||| |||||||||||||||||||||||  ||||||||| || |||||| |||||||||    
T  2799946 accagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagcctataccacta 2799880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6650679 - 6650613
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagc--actcccaggtcccaagccaataccacta 65  Q
    |||||||||||| ||||||||||| ||||||||||||  |||||| | |||||||||||||||||||    
T  6650679 accagagagaatcgaacctgagacattgaggaggagcatactccccgatcccaagccaataccacta 6650613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 15786312 - 15786378
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||| ||||||| |||||||||||||||||||||||  ||||||||| |||||||||||||| ||||    
T  15786312 accaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatactacta 15786378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 52116779 - 52116837
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||||||||||||||||| |||||||||||  |||||||| ||||||||||||||||||    
T  52116779 gagaattgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccac 52116837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 4566630 - 4566566
Alignment:
Q  3 cagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||||| |||||||||||| ||||||||||  ||||||||||| ||||||||||| |||||    
T  4566630 cagagagaatcgaacctgagaccctgaggaggagcacactcccaggttccaagccaatatcacta 4566566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 21547474 - 21547538
Alignment:
Q  3 cagagagaattgaacctgagaccttgaggaggagca--ctcccaggtcccaagccaataccacta 65  Q
    |||||||||| |||||||| |||| |||||||||||  |||||| ||||||||||||||||||||    
T  21547474 cagagagaatcgaacctgaaacctcgaggaggagcaccctcccatgtcccaagccaataccacta 21547538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 6122875 - 6122812
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||| |||| |||||||||||||||||||||||  |||||||| |||||||||| |||||||||    
T  6122875 agagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccacta 6122812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 17745248 - 17745314
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||||||| |||| |||||||| |||||||||  ||| | |||||||||||||||||||||||    
T  17745248 accagagagaatcgaacatgagacctcgaggaggagcacacgctcaggtcccaagccaataccacta 17745314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 51703863 - 51703797
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||||||| |||||||| || |||||||||||  ||||||||| | |||||||||||||||||    
T  51703863 accagagagaatcgaacctgaaactttgaggaggagcacactcccagattccaagccaataccacta 51703797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 52336766 - 52336832
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    |||||||| ||| |||||||||| ||| |||||||||||  |||||| |||||||||||||||||||    
T  52336766 accagagataatcgaacctgagatcttaaggaggagcacactcccagatcccaagccaataccacta 52336832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 3266008 - 3265970
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagcac 39  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  3266008 accagagagaatcgaacctgagaccttgaggaggagcac 3265970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 40257476 - 40257419
Alignment:
Q  8 agaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||||||||| |||||||| |||||||||  |||||||||||| ||||||||||||||    
T  40257476 agaattgaacttgagacctcgaggaggagcacactcccaggtctcaagccaataccac 40257419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1247197 - 1247149
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggt 47  Q
    |||||||||||| |||||||||||||||||||||||  |||||||||||    
T  1247197 accagagagaatcgaacctgagaccttgaggaggagtacactcccaggt 1247149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 11063637 - 11063574
Alignment:
Q  4 agagagaattgaacctgagaccttgaggagga--gcactcccaggtcccaagccaataccacta 65  Q
    ||||||||| |||||| |||||||||||||||   ||||  |||||||||||||||||||||||    
T  11063637 agagagaatcgaacctaagaccttgaggaggaacacactttcaggtcccaagccaataccacta 11063574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 31383795 - 31383854
Alignment:
Q  6 agagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccac 63  Q
    ||||||| ||||||||||||   |||||||||||  ||||||||||||||||||||||||    
T  31383795 agagaatcgaacctgagaccccaaggaggagcacactcccaggtcccaagccaataccac 31383854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 50901662 - 50901580
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggagcactc--ccaggtcccaagccaataccactaccactaggccaacctaagtgggtta 90  Q
    |||||||| |||  |||||||| |||||||||||| |  |||||||||||||||||     |||||||||||||||| ||||||||||    
T  50901662 gagagaatcgaatttgagacctcgaggaggagcacactaccaggtcccaagccaat-----taccactaggccaacccaagtgggtta 50901580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 16169976 - 16170034
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccac 63  Q
    |||||| |||||||| ||||||||||||| |||  |||||||||||||| |||||||||    
T  16169976 gagaatcgaacctgaaaccttgaggaggaacacactcccaggtcccaagtcaataccac 16170034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 19528325 - 19528383
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||||| |||||||||||||||||||||||  |||||  || |||||||||||||||||    
T  19528325 gagaatcgaacctgagaccttgaggaggagcacactcatagatcccaagccaataccac 19528383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 21694520 - 21694466
Alignment:
Q  8 agaattgaacctgagaccttgaggaggagcactcccaggtcccaagccaataccac 63  Q
    ||||| |||||||||||||||||||| | |||||||| ||| ||||||||||||||    
T  21694520 agaatcgaacctgagaccttgaggagca-cactcccaagtctcaagccaataccac 21694466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 36
Target Start/End: Original strand, 30203223 - 30203254
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggag 36  Q
    ||||||||||||||||||||||||||||||||    
T  30203223 gagagaattgaacctgagaccttgaggaggag 30203254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 31794276 - 31794322
Alignment:
Q  21 agaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||||    
T  31794276 agaccttgaggaggagcacactcccaagtcccaagccaataccacta 31794322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 8904498 - 8904460
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagcac 39  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  8904498 accagagagaatcgaacttgagaccttgaggaggagcac 8904460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 10150865 - 10150914
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaa 52  Q
    |||||||||||||||||||| |||||||||||  |||||||| |||||||    
T  10150865 gagagaattgaacctgagactttgaggaggagtacactcccaagtcccaa 10150914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 30689090 - 30689033
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggagca--ctcccaggtcccaagccaatacca 62  Q
    ||||||||||| ||||||||  ||||||||||  ||||||||||| ||||||||||||    
T  30689090 gagaattgaacatgagacctcaaggaggagcaaactcccaggtcctaagccaatacca 30689033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 51814574 - 51814540
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggagcac 39  Q
    |||||||| ||||||||||||||||||||||||||    
T  51814574 gagagaatcgaacctgagaccttgaggaggagcac 51814540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 9643805 - 9643865
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccac 63  Q
    |||| ||||||| ||||||||||||||| || |||  |||||| |||||||||||||||||    
T  9643805 gagataattgaatctgagaccttgaggatgaacacactcccagatcccaagccaataccac 9643865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 29753733 - 29753700
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggagg 34  Q
    |||||||||||| |||||||||||||||||||||    
T  29753733 accagagagaatcgaacctgagaccttgaggagg 29753700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 44046162 - 44046206
Alignment:
Q  23 accttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    |||||||||||||||||  |||||| |||||||||||||||||||    
T  44046162 accttgaggaggagcacactcccagatcccaagccaataccacta 44046206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 31049697 - 31049609
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccactaccactaggccaacctaagtgggtt 89  Q
    |||||||||||| |||  ||||| ||| |||||||||||  ||| || ||||||||||||| || || |  ||||||||||||||||||||    
T  31049697 accagagagaatcgaagatgagatctttaggaggagcacactcctagatcccaagccaatatcaatagc--taggccaacctaagtgggtt 31049609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19954 - 20020
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagc--actcccaggtcccaagccaataccacta 65  Q
    |||||||||||| ||||||||||||||||||||||||  |||||||||| |||||||||||||||||    
T  19954 accagagagaatcgaacctgagaccttgaggaggagcatactcccaggttccaagccaataccacta 20020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 94963 - 95029
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||| |||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||    
T  94963 accagagataattgaacctgagaccttgaggaggagcacactcccaggttccaagccaataccacta 95029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 3e-18; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 53413029 - 53412963
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||  ||||||||||||||||    
T  53413029 accagagagaattgaacctgagaccttgaggaggagcacactcccaggttacaagccaataccacta 53412963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 10445131 - 10445219
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccactaccactaggccaacctaagtgggttatt 92  Q
    |||||||||||| ||||||||||||| |||||||||  ||||||||||||||||||||||     | |||||||||||||| ||||||||||||    
T  10445131 accagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaat-----tgccactaggccaacccaagtgggttatt 10445219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 14186727 - 14186666
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggagcactc-ccaggtcccaagccaataccacta 65  Q
    |||||||| |||||||||||||||||||||||||| | |||||||||||| |||||||||||    
T  14186727 gagagaatcgaacctgagaccttgaggaggagcacactccaggtcccaagacaataccacta 14186666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 32651433 - 32651496
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    ||||||||| ||| |||||| |||||||||||||||  ||||||||||||||||||||||||||    
T  32651433 agagagaatcgaatctgagatcttgaggaggagcacactcccaggtcccaagccaataccacta 32651496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 4222225 - 4222159
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||||||| |||||| |||| |||||||||||  ||||||||| |||||||||||||||||||    
T  4222225 accagagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagccaataccacta 4222159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 16354884 - 16354950
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||||||| |||||||||||| ||||||||||  ||||| ||||| |||||||||||||||||    
T  16354884 accagagagaatcgaacctgagaccctgaggaggagcacactcacaggttccaagccaataccacta 16354950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 27093353 - 27093419
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    ||||||||||||  ||||||||||||||||||||||  |||||||| || |||||||||||||||||    
T  27093353 accagagagaatcaaacctgagaccttgaggaggagcacactcccaagttccaagccaataccacta 27093419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 30311390 - 30311324
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||| ||||||| |||||||||||||||||||||||  ||||||||| ||||||||| |||||||||    
T  30311390 accaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcctataccacta 30311324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 46518710 - 46518646
Alignment:
Q  3 cagagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    ||||||||||  ||||||| |||||||||||||||||  |||||| |||||||||||||||||||    
T  46518710 cagagagaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccacta 46518646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15048053 - 15048116
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaatacca 62  Q
    |||||||| ||| ||||||||||||||||||||||||||  |||||| ||||||||| ||||||    
T  15048053 accagagataatcgaacctgagaccttgaggaggagcacattcccagatcccaagcctatacca 15048116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 17035064 - 17035008
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggagcactcccaggtcccaagccaataccac 63  Q
    |||||| ||||||||||||||||||| |||||||| ||| ||||||| |||||||||    
T  17035064 gagaatcgaacctgagaccttgaggatgagcactctcagatcccaagtcaataccac 17035008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 34062540 - 34062575
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  34062540 accagagagaattgaacctgagaccttgaggaggag 34062575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 37788460 - 37788522
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccact 64  Q
    ||||||||| |||||||||||||||||||||||  |||||| |||| ||||| ||||||||||    
T  37788460 agagagaatcgaacctgagaccttgaggaggagcacactcctaggttccaagtcaataccact 37788522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 28531050 - 28531111
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagc--actcccaggtcccaagccaatac 60  Q
    ||||||||||||||| ||| |||||| ||||||||||  |||||||| ||||||||||||||    
T  28531050 accagagagaattgagcctaagacctcgaggaggagcatactcccagatcccaagccaatac 28531111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 28703396 - 28703461
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccact 64  Q
    |||||||||||| |||||||||||||||| ||||||  ||||||||| |||||||| |||| ||||    
T  28703396 accagagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaagctaatatcact 28703461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 21960631 - 21960571
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccac 63  Q
    |||||||| ||| ||||||||| ||||||||||||  || |||||||||||||||||||||    
T  21960631 gagagaatcgaatctgagacctcgaggaggagcacactctcaggtcccaagccaataccac 21960571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 54990780 - 54990728
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggagca--ctcccaggtcccaagccaa 57  Q
    |||||| |||||||||||||||||||||||||  |||| ||||||||||||||    
T  54990780 gagaatcgaacctgagaccttgaggaggagcacgctccaaggtcccaagccaa 54990728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 8075122 - 8075185
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||| |||| |||||||| ||||||||||||||  |||||||| |||||||||| |||||||||    
T  8075122 agagggaatcgaacctgaaaccttgaggaggagcacactcccaagtcccaagcctataccacta 8075185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 17554842 - 17554791
Alignment:
Q  14 gaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccac 63  Q
    ||||||||| ||||||||| ||||||  ||||||||||||||||||||||||    
T  17554842 gaacctgagcccttgaggaagagcacactcccaggtcccaagccaataccac 17554791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 51903874 - 51903933
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaatacca 62  Q
    |||||||| ||||||||||||  |||||||||  ||||||||| ||||||||||||||||    
T  51903874 gagagaatcgaacctgagaccacgaggaggagcacactcccagatcccaagccaatacca 51903933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 13808880 - 13808915
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggagcac 39  Q
    ||||||||||||||||||||||| ||||||||||||    
T  13808880 agagagaattgaacctgagacctagaggaggagcac 13808915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 14339688 - 14339630
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||||| ||||||||||| |||||||||||  ||||||||  |||||||||||||||||    
T  14339688 gagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagccaataccac 14339630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 27259243 - 27259185
Alignment:
Q  3 cagagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaata 59  Q
    ||||||||||  ||||||| |||| ||||||||||||  ||||||||||||||||||||    
T  27259243 cagagagaatcaaacctgaaacctcgaggaggagcacactcccaggtcccaagccaata 27259185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 53863860 - 53863917
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaa 57  Q
    ||||||||||||||||||| ||||||||| ||||||  |||||| ||||||||||||||    
T  53863860 accagagagaattgaacctaagaccttga-gaggagcacactccaaggtcccaagccaa 53863917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 2667943 - 2667882
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccac 63  Q
    ||||| ||| ||||||||||||| ||||| ||||||  |||||| |||||||||||||||||    
T  2667943 agagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaataccac 2667882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 30510194 - 30510255
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggagc--actcccaggtcccaagccaataccac 63  Q
    ||||||||| ||||||||||||| ||| ||||||  ||||| ||||||||||||| ||||||    
T  30510194 agagagaatcgaacctgagacctcgagaaggagcatactcctaggtcccaagccagtaccac 30510255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 36720462 - 36720401
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    ||||||||| |||||||| |||| |||||||||  ||||||||  |||||||||||||||||    
T  36720462 agagagaatcgaacctgaaacctcgaggaggagcacactcccatatcccaagccaataccac 36720401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 4844507 - 4844567
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||||||| || |||||||||| |||||||||  ||||||||| ||||||| |||||||||    
T  4844507 gagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccac 4844567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 4870203 - 4870263
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||||||| || |||||||||| |||||||||  ||||||||| ||||||| |||||||||    
T  4870203 gagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccac 4870263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 7975488 - 7975436
Alignment:
Q  15 aacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    ||||| ||||||||||||||||  ||||||||| ||||||||| |||||||||    
T  7975488 aacctaagaccttgaggaggagcacactcccagatcccaagcctataccacta 7975436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 10499105 - 10499165
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggagca--ctcccaggtcccaagccaataccac 63  Q
    |||||||| |||||||||||||  |||| |||||  ||||||| |||||||||||||||||    
T  10499105 gagagaatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaataccac 10499165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 39
Target Start/End: Original strand, 24353380 - 24353409
Alignment:
Q  10 aattgaacctgagaccttgaggaggagcac 39  Q
    ||||||||||||||||||||||||||||||    
T  24353380 aattgaacctgagaccttgaggaggagcac 24353409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 39253779 - 39253727
Alignment:
Q  3 cagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaag 53  Q
    |||||||||| |||||||||||||||| ||||||  ||||||||| |||||||    
T  39253779 cagagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaag 39253727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 47454615 - 47454675
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||| ||||||||||||| |||||||||  |||||| || || ||||||||||||||||    
T  47454615 gagaatcgaacctgagacctcgaggaggagcacactccaagatctcaagccaataccacta 47454675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 39
Target Start/End: Complemental strand, 49452947 - 49452919
Alignment:
Q  11 attgaacctgagaccttgaggaggagcac 39  Q
    |||||||||||||||||||||||||||||    
T  49452947 attgaacctgagaccttgaggaggagcac 49452919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 42327392 - 42327453
Alignment:
Q  6 agagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    ||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  42327392 agagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccacta 42327453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 29503349 - 29503289
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||| |||||||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  29503349 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccacta 29503289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 42922499 - 42922432
Alignment:
Q  1 accagagagaattgaacctgagacctt-gaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    |||||||||||| |||||||||||||| ||||||||||||  |||||||| |||||||||||||||||    
T  42922499 accagagagaatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaataccacta 42922432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 11251171 - 11251105
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    ||||||||||||  ||||||||||||||||||||||  |||| ||| ||||||||||||||||||||    
T  11251171 accagagagaatcaaacctgagaccttgaggaggagcacacttccaagtcccaagccaataccacta 11251105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 37480153 - 37480095
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||||| |||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  37480153 gagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccac 37480095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 40416382 - 40416448
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagc--actcccaggtcccaagccaataccacta 65  Q
    |||||||||||| |||||||||||||| |||||||||  |||||||||| ||||| |||||||||||    
T  40416382 accagagagaatcgaacctgagaccttaaggaggagcatactcccaggttccaagtcaataccacta 40416448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 4262298 - 4262354
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaata 59  Q
    |||||||| |||||||||||||||||||||||  |||| ||||||||||||||||||    
T  4262298 gagagaatcgaacctgagaccttgaggaggagcacactgccaggtcccaagccaata 4262354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 19244193 - 19244130
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaatacca 62  Q
    |||||||||||| ||||||||||||||| |||||||  ||||| ||||||||||| ||||||||    
T  19244193 accagagagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtcaatacca 19244130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 22382237 - 22382293
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggagcactcccaggtcccaagccaataccac 63  Q
    |||||| |||| |||||||||||||| |||||||||||||||| ||| |||||||||    
T  22382237 gagaatcgaacttgagaccttgaggatgagcactcccaggtccaaagtcaataccac 22382293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 22914263 - 22914319
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggagcactcccaggtcccaagccaataccac 63  Q
    |||||| |||| |||||||||||||| |||||||||||||||| ||| |||||||||    
T  22914263 gagaatcgaacttgagaccttgaggatgagcactcccaggtccaaagtcaataccac 22914319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 22999286 - 22999242
Alignment:
Q  19 tgagaccttgaggaggagcactcccaggtcccaagccaataccac 63  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||    
T  22999286 tgagaccttgaggaggagcactcccaggtccaaagtcaataccac 22999242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 16918570 - 16918636
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    ||||||||||||  ||||| ||||||||||||||||  ||||||||| |||||| ||||||||||||    
T  16918570 accagagagaatccaacctaagaccttgaggaggagcacactcccagatcccaaaccaataccacta 16918636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 23052521 - 23052579
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||||| |||||||||||||||||||| ||  |||||||| ||||||||||||||||||    
T  23052521 gagaatcgaacctgagaccttgaggagaagcacactcccaagtcccaagccaataccac 23052579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30410541 - 30410607
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    |||||||| ||| |||| |||| ||||||||||||||||  ||| ||||||||||||||||||||||    
T  30410541 accagagaaaatcgaacatgagtccttgaggaggagcacactcctaggtcccaagccaataccacta 30410607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 39715070 - 39715012
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||||| ||||||||||||| |||||||||  ||||||||||||||||| |||||||||    
T  39715070 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccac 39715012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 42602634 - 42602572
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    ||||||||  ||||| |||||||||| ||||||||  ||||||||||||||||||||||||||    
T  42602634 gagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaataccacta 42602572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 33839252 - 33839290
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagcac 39  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  33839252 accagaaagaattgaacctgagaccttgaggaggagcac 33839290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 12086129 - 12086185
Alignment:
Q  9 gaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||| ||||| |||||||||||||||||  |||| ||||||||||||||||||||||    
T  12086129 gaatcgaacccgagaccttgaggaggagcacacttccaggtcccaagccaataccac 12086185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 19322849 - 19322786
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    |||||||||  |||| |||||||||| |||||||||  ||||||||||||| ||||||||||||    
T  19322849 agagagaatcaaaccagagaccttgaagaggagcacactcccaggtcccaaaccaataccacta 19322786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 21195671 - 21195734
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||| |||| |||||||||||||||||||||||  |||||||| || ||||||| |||||||||    
T  21195671 agagggaatcgaacctgagaccttgaggaggagcacactcccaagttccaagcctataccacta 21195734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 1729900 - 1729834
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    ||||||||||||  || || |||||| ||||||||||||  ||||| ||||||||||||||||||||    
T  1729900 accagagagaatcaaatctaagacctagaggaggagcacactcccaagtcccaagccaataccacta 1729834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 12994376 - 12994434
Alignment:
Q  9 gaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    |||| |||| ||||||||| |||||||||||  |||||||||||||| |||||||||||    
T  12994376 gaatcgaacttgagaccttaaggaggagcacactcccaggtcccaagtcaataccacta 12994434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 21213847 - 21213789
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccac 63  Q
    |||||| |||||||||||||  ||||||| |||  ||||||||||||||||||||||||    
T  21213847 gagaatcgaacctgagacctcaaggaggaacacactcccaggtcccaagccaataccac 21213789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 28846762 - 28846709
Alignment:
Q  14 gaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    ||||||||||| | ||||||||||||  |||||||||||||| |||||||||||    
T  28846762 gaacctgagacatcgaggaggagcacactcccaggtcccaagtcaataccacta 28846709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 7799031 - 7799091
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccac 63  Q
    |||||||| ||| |||||| || ||||||||||||  ||||| ||||||||||||||||||    
T  7799031 gagagaatcgaatctgagatctcgaggaggagcacactcccaagtcccaagccaataccac 7799091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 13803577 - 13803513
Alignment:
Q  3 cagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||| ||| |||||||||||||||||||||||  |||||| | ||| |||||||||| |||||    
T  13803577 cagagataatcgaacctgagaccttgaggaggagcacactcctaagtctcaagccaatatcacta 13803513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 11062441 - 11062378
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||||  ||||||||||||||||||| ||  |||||||| || ||||||||||| |||||    
T  11062441 agagagaatcaaacctgagaccttgaggagaagcacactcccaagttccaagccaatatcacta 11062378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 37755976 - 37756027
Alignment:
Q  14 gaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccac 63  Q
    |||| |||||||| ||| ||||||||  ||||||||||||||||||||||||    
T  37755976 gaacttgagacctcgagtaggagcacattcccaggtcccaagccaataccac 37756027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 30883196 - 30883256
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||    
T  30883196 gagaattgaacttgagaccttgaggaggagcacactcccaggtcccaagccaataccacta 30883256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 7918461 - 7918527
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggagga--gcactcccaggtcccaagccaataccacta 65  Q
    |||||||||||| |||||| |||||||||||||||  |||||||||||| |||||||||||||||||    
T  7918461 accagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccacta 7918527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 17155901 - 17155842
Alignment:
Q  6 agagaattgaacctgagaccttgaggaggagcactcccaggtcccaagccaataccacta 65  Q
    |||||||  ||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  17155901 agagaatcaaacctgagaccttgaggaggagcactctcaggtcccaaaccaataccacta 17155842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 25627141 - 25627075
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||||||| |||||||||||||||||||||||  |||||||| || |||||||||||||||||    
T  25627141 accagagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaataccacta 25627075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 34984890 - 34984824
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||||||| |||||| ||||||||||||||||  ||||||||||| |||||||||||||||||    
T  34984890 accagagagaatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaataccacta 34984824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 14285245 - 14285180
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccact 64  Q
    |||||||||||| |||||||||||||||||||||||  ||||||||||| |||||||||| |||||    
T  14285245 accagagagaatcgaacctgagaccttgaggaggagcacactcccaggttccaagccaattccact 14285180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 5390857 - 5390908
Alignment:
Q  14 gaacctgagaccttgaggaggagcactcccaggtcccaagccaataccacta 65  Q
    ||||||||||||| ||||||||||||||||| | ||||||||||||||||||    
T  5390857 gaacctgagacctcgaggaggagcactcccaagccccaagccaataccacta 5390908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 16457888 - 16457830
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    ||||||||||| ||||||||||||||||||  |||||| ||||||||||||||||||||    
T  16457888 gagaattgaacatgagaccttgaggaggagcacactccaaggtcccaagccaataccac 16457830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 16773889 - 16773827
Alignment:
Q  3 cagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||||||||| ||||||||||||| |||||||||  ||||||||||||||||| |||||||||    
T  16773889 cagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccac 16773827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 18595993 - 18596059
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    |||||||| ||| |||||| |||||||||||||||||||  ||||||||| ||||||||||||||||    
T  18595993 accagagaaaatcgaacctaagaccttgaggaggagcacattcccaggtcacaagccaataccacta 18596059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 892476 - 892532
Alignment:
Q  11 attgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    ||||||||||||||||||||||||||  |||||  ||||||||||||||||||||||    
T  892476 attgaacctgagaccttgaggaggagtacactctgaggtcccaagccaataccacta 892532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 43442278 - 43442214
Alignment:
Q  3 cagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||||| |||||||||||||||||||||||  ||||||||| || ||| ||||||||||||    
T  43442278 cagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaaaccaataccacta 43442214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29075865 - 29075799
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    |||||||||||| |||| ||||| || ||||||||||||  |||||| |||||||||||||||||||    
T  29075865 accagagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaataccacta 29075799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 37258358 - 37258424
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||||||| |||||||| ||||||||||||||  |||||| || |||||||| ||||||||||    
T  37258358 accagagagaatcgaacctgaaaccttgaggaggagcacactcctagatcccaagctaataccacta 37258424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 21589372 - 21589308
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagca--ctcccaggtcccaagccaataccac 63  Q
    ||||||| |||| ||||||||||| | |||||| ||||  |||||||||||||||||||||||||    
T  21589372 accagagggaatcgaacctgagacatcgaggagtagcagactcccaggtcccaagccaataccac 21589308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 29692382 - 29692442
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    ||||||||| |||||||||| |||||||||||  ||||||||| |||||| ||||||||||    
T  29692382 gagagaattaaacctgagactttgaggaggagcacactcccagatcccaatccaataccac 29692442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 30700610 - 30700692
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagcactcccaggtcccaagccaataccactaccactaggccaacctaagtgggtt 89  Q
    |||||||| |||||||||||||||||| || |||||||||| |||||  |||| |||      ||| ||||||||||||||||||||||    
T  30700610 accagagataattgaacctgagaccttaagaaggagcactctcaggttacaagtcaa------tacgactaggccaacctaagtgggtt 30700692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 16436688 - 16436636
Alignment:
Q  14 gaacctgagaccttgaggaggagcactc-ccaggtcccaagccaataccacta 65  Q
    |||| ||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  16436688 gaacatgagaccttgaggaggagcacactccaagtcccaagccaataccacta 16436636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 21549132 - 21549195
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    ||||| ||| |||| |||||| || |||||||||||  ||||||||||||||||||||||||||    
T  21549132 agagaaaatcgaacttgagactttaaggaggagcacactcccaggtcccaagccaataccacta 21549195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 26078046 - 26078109
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggagc--actcccaggtcccaagccaataccacta 65  Q
    ||||||||| |||||||||||||||| ||| |||  ||||||| ||||||| ||||||||||||    
T  26078046 agagagaatcgaacctgagaccttgaagagaagcatactcccaagtcccaaaccaataccacta 26078109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 43230769 - 43230853
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccactaccactaggccaacctaagtgggtta 90  Q
    ||||||||||||| |||||| ||| ||||||||  ||||| |||  ||||||||||||    |||||||||||||||| ||||||||||    
T  43230769 agagagaattgaatctgagatcttaaggaggagcacactctcagaacccaagccaata----taccactaggccaacccaagtgggtta 43230853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 25979251 - 25979194
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaata 59  Q
    ||||||||| |||||||||||||||||||||||  ||||||||  | |||||||||||    
T  25979251 agagagaatcgaacctgagaccttgaggaggagaacactcccaaattccaagccaata 25979194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 87429 - 87481
Alignment:
Q  15 aacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    ||||||||||||||||||||||  ||||||||| | ||||| |||||||||||    
T  87429 aacctgagaccttgaggaggagcacactcccagattccaaggcaataccacta 87481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 17028270 - 17028322
Alignment:
Q  15 aacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    ||||||||||||||||||||||  |||||||| ||||||| ||||||| ||||    
T  17028270 aacctgagaccttgaggaggagcacactcccaagtcccaacccaatacaacta 17028322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 22737164 - 22737100
Alignment:
Q  3 cagagagaattgaacctgagaccttgaggaggagcactc--ccaggtcccaagccaataccacta 65  Q
    ||||| |||| ||||||||||| ||| |||||||||| |  ||| ||||||||||||||||||||    
T  22737164 cagagggaatcgaacctgagacattggggaggagcacacttccaagtcccaagccaataccacta 22737100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 30109308 - 30109364
Alignment:
Q  9 gaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccac 63  Q
    |||| |||||||||||||  |||||||||||  ||||||||| ||||||||||||||    
T  30109308 gaatcgaacctgagacctcaaggaggagcacactcccaggtcacaagccaataccac 30109364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 84902 - 84851
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagcca 56  Q
    |||||| |||| ||||||||||||||||||  ||||||||| ||||||||||    
T  84902 gagaatcgaacttgagaccttgaggaggagcacactcccagatcccaagcca 84851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 4793094 - 4793141
Alignment:
Q  15 aacctgagaccttgaggaggag--cactcccaggtcccaagccaatac 60  Q
    |||||||||||| |||||||||  |||||||||||||||| |||||||    
T  4793094 aacctgagacctcgaggaggagcacactcccaggtcccaaaccaatac 4793141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 18974044 - 18973985
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagcactcccaggtcccaagccaataccac 63  Q
    ||||| |||||| |||||||| ||||||||||||||||   | |||||||||| |||||||||    
T  18974044 accagggagaatcgaacctgacaccttgaggaggagca---caaggtcccaagtcaataccac 18973985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 11612 - 11548
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||||||||||| ||||||||||||| |||||||||  ||||||||| |||||||||||||||||    
T  11612 accagagagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccaataccac 11548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 15319 - 15379
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||||||| ||||||||||||| |||||||||  |||||||||||||||||||||||||||    
T  15319 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccac 15379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 33549184 - 33549124
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccac 63  Q
    |||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  33549184 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccac 33549124  T

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Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 12188298 - 12188361
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    ||||||||| |||| ||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  12188298 agagagaatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaataccacta 12188361  T

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Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 6385942 - 6385882
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccac 63  Q
    |||||||| |||||||||||||| |||||||||||  |||||||||||||| |||||||||    
T  6385942 gagagaatcgaacctgagaccttaaggaggagcacagtcccaggtcccaagtcaataccac 6385882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 10338174 - 10338230
Alignment:
Q  9 gaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||| |||||||||||||||||||||||  |||||| ||||||||||||||||||||    
T  10338174 gaatcgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccac 10338230  T

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Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 24507532 - 24507594
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggagc--actcccaggtcccaagccaataccacta 65  Q
    ||||||||||||||  |||||||||||||||||  ||||| |||||||||||||| |||||||    
T  24507532 gagagaattgaaccctagaccttgaggaggagcaaactccaaggtcccaagccaacaccacta 24507594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 31622997 - 31623047
Alignment:
Q  15 aacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccac 63  Q
    |||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  31622997 aacctgagacctcgaggaggagcacactcccaggtcccaagccaataccac 31623047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14278103 - 14278164
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggagga--gcactcccaggtcccaagccaatac 60  Q
    ||||||||||||  ||||||||||||| |||||||  |||||||||||||| ||||||||||    
T  14278103 accagagagaatcaaacctgagaccttaaggaggagcgcactcccaggtccaaagccaatac 14278164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15951294 - 15951332
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagcac 39  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  15951294 accagagagaattgaacatgagaccttgaggaggagcac 15951332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 3779421 - 3779357
Alignment:
Q  3 cagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    ||||| |||||||| ||||||||||||| |||||  |||||||| ||| ||||||||||||||||    
T  3779421 cagagggaattgaatctgagaccttgagaaggagcacactcccaagtctcaagccaataccacta 3779357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 20213122 - 20213059
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||| |||| ||||||||||| |||||||||||  ||||||||||||||||||  |||||||||    
T  20213122 agagggaatcgaacctgagacattgaggaggagcacactcccaggtcccaagcgtataccacta 20213059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 20863456 - 20863366
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac--taccactaggccaacctaagtgggtta 90  Q
    |||||||||  || |||||||||||||||||||  |||||| | |||||||||||| |||||   ||||| ||||||||| ||||||||||    
T  20863456 agagagaatcaaatctgagaccttgaggaggagcacactccaaagtcccaagccaacaccaccacaccaccaggccaacccaagtgggtta 20863366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 22107145 - 22107082
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||| |||| ||||||||||| |||||||||||  ||||||||||||||||||  |||||||||    
T  22107145 agagggaatcgaacctgagacattgaggaggagcacactcccaggtcccaagcgtataccacta 22107082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 38
Target Start/End: Original strand, 24334023 - 24334054
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggagca 38  Q
    ||||||||||||||||||||||||||||||||    
T  24334023 gagaattgaacctgagaccttgaggaggagca 24334054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 28364021 - 28363955
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||| ||| ||| |||||||||||||||||||  ||||| ||| |||||| ||||||||||||    
T  28364021 accagagataatcgaatctgagaccttgaggaggagcacactcgcagatcccaaaccaataccacta 28363955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 11306166 - 11306227
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagc--actcccaggtcccaagccaatac 60  Q
    |||||||||||| |||||||||||||||| || ||||  ||||||||| || ||||||||||    
T  11306166 accagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaatac 11306227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 23910116 - 23910157
Alignment:
Q  14 gaacctgagaccttgaggaggag--cactcccaggtcccaag 53  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  23910116 gaacctgagaccttgaggaggagcacactcccaggtcccaag 23910157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 12234503 - 12234563
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccac 63  Q
    |||||||| ||||||||||||| |||  |||||||  |||||||||||||| |||||||||    
T  12234503 gagagaatcgaacctgagacctcgagagggagcacactcccaggtcccaagtcaataccac 12234563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 12216823 - 12216764
Alignment:
Q  6 agagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccac 63  Q
    ||||||| ||||||||||||| ||| ||||||||  || |||||||||| ||||||||||    
T  12216823 agagaatcgaacctgagacctcgagaaggagcacattcgcaggtcccaaaccaataccac 12216764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 13330168 - 13330105
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggagc--actcccaggtcccaagccaataccacta 65  Q
    ||||||||| ||| ||||||||||||||||||||  ||||||| || | ||| |||||||||||    
T  13330168 agagagaatcgaatctgagaccttgaggaggagcttactcccaagttcaaagtcaataccacta 13330105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 34444886 - 34444823
Alignment:
Q  2 ccagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||| |||||| ||||||||||||||| |||||||  |||||  |||||||||| |||||||||    
T  34444886 ccagggagaatcgaacctgagaccttggggaggagcacactctaaggtcccaagtcaataccac 34444823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 13042 - 13102
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||||||| |||||||||||||||||||||||  ||||||||| || ||||||||||||||    
T  13042 gagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagccaataccac 13102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 41627 - 41691
Alignment:
Q  3 cagagagaattgaacctgagaccttgaggaggagc--actcccaggtcccaagccaataccacta 65  Q
    |||||||||||||||||||||||| ||||||||||  |||| ||| || ||||||||||||||||    
T  41627 cagagagaattgaacctgagacctcgaggaggagcatactctcagatctcaagccaataccacta 41691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 1833 - 1771
Alignment:
Q  5 gagagaattgaacctgagaccttgaggaggagc--actcccaggtcccaagccaataccacta 65  Q
    ||||||||||||||  |||||||||||||||||  ||||| |||||||||||||| |||||||    
T  1833 gagagaattgaaccctagaccttgaggaggagcaaactccaaggtcccaagccaacaccacta 1771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 25339 - 25405
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    |||||||| ||| ||||||||||||||||| |||||  |||||||| ||| ||||||||||||||||    
T  25339 accagagataatcgaacctgagaccttgagaaggagcacactcccaagtctcaagccaataccacta 25405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 12273 - 12207
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagc--actcccaggtcccaagccaataccacta 65  Q
    ||||||||||||| ||| | |||||||||||||||||  ||||| |||||||||||||| |||||||    
T  12273 accagagagaatttaactttagaccttgaggaggagcaaactccaaggtcccaagccaacaccacta 12207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 835 - 896
Alignment:
Q  4 agagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccac 63  Q
    ||||||||| ||||||||||| | ||||||||||||  |||||| |||||||||||||||||    
T  835 agagagaatcgaacctgagacttcgaggaggagcacattcccagatcccaagccaataccac 896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 2703 - 2740
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagca 38  Q
    |||||||||||| |||||||||||||||||||||||||    
T  2703 accagagagaatcgaacctgagaccttgaggaggagca 2740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 2468 - 2526
Alignment:
Q  7 gagaattgaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccac 63  Q
    |||||| |||||||||||||||||||||||  ||||||||| ||| || ||||||||||    
T  2468 gagaatcgaacctgagaccttgaggaggagcacactcccagatccaaaaccaataccac 2526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18383 - 18317
Alignment:
Q  1 accagagagaattgaacctgagaccttgaggaggagcac--tcccaggtcccaagccaataccacta 65  Q
    ||||||||||||  ||||||| |||||||||||||||||  |||||| | |||||||||| ||||||    
T  18383 accagagagaatcaaacctgaaaccttgaggaggagcacaatcccagattccaagccaatgccacta 18317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 6924 - 6977
Alignment:
Q  14 gaacctgagaccttgaggaggag--cactcccaggtcccaagccaataccacta 65  Q
    ||||||||||| |||||||||||  |||||||  ||||||||||||||||||||    
T  6924 gaacctgagactttgaggaggagcacactccccagtcccaagccaataccacta 6977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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