View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11232_high_2 (Length: 404)
Name: NF11232_high_2
Description: NF11232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11232_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 357; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 7 - 387
Target Start/End: Complemental strand, 48650745 - 48650365
Alignment:
| Q |
7 |
ggtggaagatttgaggtggagggacacccattgccatagcctcggttgatctgtagacaggagcagggtggtggtacatgattggcatcgcacccacaat |
106 |
Q |
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| T |
48650745 |
ggtggaagatttgaggtggagggacacccattgccatagcctcggttgatctgtagacaggagcagggtggtggtacatgattggcatcgcacccacaat |
48650646 |
T |
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| Q |
107 |
agcctgcctcggcggcgggtacacgtagcccccacccattccatagctcagtttctgctgcatttgtccaacaattttttcaaattaaaataaaaatatt |
206 |
Q |
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| T |
48650645 |
agcctgcctcggcggcgggtacacgtagcccccacccattccatagctcagtttctgctgcattcgtccaacaattttttcaaataaaaataaaaatatt |
48650546 |
T |
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| Q |
207 |
atttcttgttattgaattgggcatgcaatacgtaataaccacctgacctacctgattgtaattgtaattcatatgatctgttgcaatgtaggtgggcgtg |
306 |
Q |
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| T |
48650545 |
atttcttgttattgaattgggcatgcaatacgtaataaccaccagacctacctgattgtaattgtaattcatatgatctgttgcaatgtaggtgggcgtg |
48650446 |
T |
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| Q |
307 |
tacctgaatgaatgagagaaagagattcattaaatcacattatatgcctcaactcaacgcctattttttagaacaaaaagc |
387 |
Q |
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| T |
48650445 |
tacctgaatgaatgagagaaagagattcactaaatcacattatatgccaaaactcaacgcctattttttagaacaaaaagc |
48650365 |
T |
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